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MAMMALIAN PHENOTYPE - ANNOTATIONS

The Mouse Adult Gross Anatomy Ontology and Mammalian Phenotype Ontology are downloaded weekly from the Mouse Genome Informatics databases at Jackson Laboratories (ftp://ftp.informatics.jax.org/pub/reports/index.html). For more information about these ontologies, see the MGI Publications Page at http://www.informatics.jax.org/mgihome/other/publications.shtml.

Term:abnormal outer ear morphology
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Accession:MP:0002177 term browser browse the term
Definition:any structural anomaly of any components of the auricles or external acoustic meatus
Synonyms:exact_synonym: abnormal pinna morphology;   dysplastic pinna;   outer ear dysplasia



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abnormal outer ear morphology term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca12 ATP-binding cassette, sub-family A (ABC1), member 12 IEA MGI NCBI chr 1:71,282,249...71,454,069
Ensembl chr 1:71,281,435...71,454,069
JBrowse link
G Bmp5 bone morphogenetic protein 5 IEA MGI NCBI chr 9:75,682,647...75,807,598
Ensembl chr 9:75,682,646...75,807,592
JBrowse link
G Cdo1 cysteine dioxygenase 1, cytosolic IAGP MGI PMID:21693692 NCBI chr18:46,846,260...46,861,569
Ensembl chr18:46,846,260...46,861,462
JBrowse link
G Chd7 chromodomain helicase DNA binding protein 7 IAGP MGI PMID:16207732 NCBI chr 4:8,690,345...8,868,449
Ensembl chr 4:8,690,406...8,867,659
JBrowse link
G Chrd chordin IAGP MGI PMID:19247433 NCBI chr16:20,551,492...20,561,134
Ensembl chr16:20,551,877...20,561,134
JBrowse link
G Col4a2 collagen, type IV, alpha 2 IEA MGI NCBI chr 8:11,362,805...11,499,287
Ensembl chr 8:11,362,805...11,499,287
JBrowse link
G Ddr1 discoidin domain receptor family, member 1 IAGP MGI PMID:11283268 NCBI chr17:35,992,459...36,015,633
Ensembl chr17:35,992,459...36,015,513
JBrowse link
G Dlx5 distal-less homeobox 5 IAGP MGI PMID:10433912 NCBI chr 6:6,877,801...6,882,068
Ensembl chr 6:6,877,805...6,882,085
JBrowse link
G Ece1 endothelin converting enzyme 1 IAGP MGI PMID:10811845 NCBI chr 4:137,589,548...137,692,540
Ensembl chr 4:137,589,548...137,692,540
JBrowse link
G Ece2 endothelin converting enzyme 2 IAGP MGI PMID:10811845 NCBI chr16:20,448,601...20,464,665
Ensembl chr16:20,448,578...20,465,235
JBrowse link
G Edaradd EDAR (ectodysplasin-A receptor)-associated death domain IAGP MGI PMID:24539712 NCBI chr13:12,486,090...12,535,413
Ensembl chr13:12,487,513...12,535,319
JBrowse link
G Ednra endothelin receptor type A IAGP MGI PMID:9449664 NCBI chr 8:78,389,658...78,451,081
Ensembl chr 8:78,389,660...78,451,093
JBrowse link
G Egfr epidermal growth factor receptor IAGP MGI PMID:7630400 NCBI chr11:16,700,153...16,868,158
Ensembl chr11:16,702,203...16,868,158
JBrowse link
G Eif3c eukaryotic translation initiation factor 3, subunit C IEA MGI NCBI chr 7:126,146,083...126,165,538
Ensembl chr 7:126,145,627...126,165,583
JBrowse link
G Fas Fas (TNF receptor superfamily member 6) IAGP MGI PMID:17608689 NCBI chr19:34,267,926...34,305,175
Ensembl chr19:34,268,066...34,305,172
JBrowse link
G Fgfr1 fibroblast growth factor receptor 1 IAGP MGI PMID:15630379 PMID:21479780 NCBI chr 8:26,008,775...26,065,734
Ensembl chr 8:26,003,670...26,065,734
JBrowse link
G Gnas GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus IAGP MGI PMID:9671744 NCBI chr 2:174,126,113...174,188,537
Ensembl chr 2:174,126,113...174,188,537
JBrowse link
G H13 histocompatibility 13 IEA MGI NCBI chr 2:152,511,292...152,550,588
Ensembl chr 2:152,511,381...152,550,590
JBrowse link
G H2az2 H2A.Z histone variant 2 IAGP MGI PMID:18952847 NCBI chr11:6,377,226...6,394,511
Ensembl chr11:6,377,229...6,394,443
JBrowse link
G Hoxa1 homeobox A1 IAGP MGI PMID:1346922 NCBI chr 6:52,132,347...52,135,297
Ensembl chr 6:52,132,570...52,135,297
JBrowse link
G Hoxa2 homeobox A2 IAGP MGI PMID:7903600 PMID:11578867 NCBI chr 6:52,139,397...52,141,811
Ensembl chr 6:52,139,397...52,141,811
JBrowse link
G Jak1 Janus kinase 1 IAGP MGI PMID:22527485 PMID:23791841 NCBI chr 4:101,009,171...101,122,493
Ensembl chr 4:101,009,564...101,122,479
JBrowse link
G Kif1b kinesin family member 1B IEA MGI NCBI chr 4:149,260,776...149,392,762
Ensembl chr 4:149,260,776...149,392,150
JBrowse link
G Lrp6 low density lipoprotein receptor-related protein 6 IEA MGI NCBI chr 6:134,423,439...134,543,876
Ensembl chr 6:134,423,439...134,543,928
JBrowse link
G Map2k1 mitogen-activated protein kinase kinase 1 IAGP MGI PMID:17419998 PMID:18952847 NCBI chr 9:64,093,051...64,160,887
Ensembl chr 9:64,093,052...64,160,913
JBrowse link
G Map2k2 mitogen-activated protein kinase kinase 2 IAGP MGI PMID:17419998 PMID:18952847 NCBI chr10:80,941,749...80,960,531
Ensembl chr10:80,941,749...80,969,809
JBrowse link
G Pax8 paired box 8 IAGP MGI PMID:14981357 NCBI chr 2:24,310,563...24,365,611
Ensembl chr 2:24,310,572...24,365,611
JBrowse link
G Pbx1 pre B cell leukemia homeobox 1 IAGP MGI PMID:11566859 NCBI chr 1:167,946,933...168,259,898
Ensembl chr 1:167,946,933...168,259,839
JBrowse link
G Pgap1 post-GPI attachment to proteins 1 IAGP MGI PMID:10529425 NCBI chr 1:54,512,159...54,596,843
Ensembl chr 1:54,512,153...54,596,843
JBrowse link
G Prkra protein kinase, interferon inducible double stranded RNA dependent activator IAGP MGI PMID:16571658 NCBI chr 2:76,436,385...76,478,614
Ensembl chr 2:76,460,242...76,478,359
JBrowse link
G Psph phosphoserine phosphatase IEA MGI NCBI chr 5:129,842,622...129,864,318
Ensembl chr 5:129,842,622...129,864,513
JBrowse link
G Pstpip2 proline-serine-threonine phosphatase-interacting protein 2 IAGP MGI PMID:16122996 NCBI chr18:77,882,250...77,971,462
Ensembl chr18:77,877,614...77,970,579
JBrowse link
G Shh sonic hedgehog IAGP MGI PMID:25373905 NCBI chr 5:28,661,838...28,672,099
Ensembl chr 5:28,661,813...28,672,254
JBrowse link
G Smn1 survival motor neuron 1 IAGP MGI PMID:20085811 NCBI chr13:100,259,713...100,274,206
Ensembl chr13:100,261,360...100,274,198
JBrowse link
G Sptbn1 spectrin beta, non-erythrocytic 1 IAGP MGI PMID:20739274 NCBI chr11:30,049,395...30,218,384
Ensembl chr11:30,049,395...30,218,175
JBrowse link
G Tbx1 T-box 1 IAGP MGI PMID:12913075 PMID:19247433 NCBI chr16:18,399,729...18,409,421
Ensembl chr16:18,399,729...18,409,421
JBrowse link
G Tcof1 treacle ribosome biogenesis factor 1 IAGP MGI PMID:10888597 NCBI chr18:60,946,827...60,982,055
Ensembl chr18:60,946,827...60,982,043
JBrowse link
G Tnfrsf9 tumor necrosis factor receptor superfamily, member 9 IAGP MGI PMID:17608689 NCBI chr 4:151,004,612...151,030,561
Ensembl chr 4:150,999,019...151,030,559
JBrowse link
G Trp53 transformation related protein 53 IAGP MGI PMID:25119037 NCBI chr11:69,471,174...69,482,699
Ensembl chr11:69,471,185...69,482,699
JBrowse link
G Vps25 vacuolar protein sorting 25 IAGP MGI PMID:25373905 NCBI chr11:101,144,533...101,150,377
Ensembl chr11:101,144,533...101,150,375
JBrowse link
abnormal ear lobe morphology term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gpr89 G protein-coupled receptor 89 IAGP MGI PMID:22572823 NCBI chr 3:96,775,614...96,812,662
Ensembl chr 3:96,775,597...96,812,662
JBrowse link
abnormal ear pigmentation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gt(ROSA)26Sor gene trap ROSA 26, Philippe Soriano IAGP MGI PMID:20880997 NCBI chr 6:113,044,389...113,054,205
Ensembl chr 6:113,043,843...113,054,294
JBrowse link
G Hps1 HPS1, biogenesis of lysosomal organelles complex 3 subunit 1 IEA MGI NCBI chr19:42,743,629...42,770,013
Ensembl chr19:42,743,544...42,768,417
JBrowse link
G Hps4 HPS4, biogenesis of lysosomal organelles complex 3 subunit 2 IAGP MGI PMID:6031677 NCBI chr 5:112,490,849...112,526,290
Ensembl chr 5:112,490,949...112,526,280
JBrowse link
G Kit KIT proto-oncogene receptor tyrosine kinase IAGP MGI PMID:1490901 PMID:5473311 NCBI chr 5:75,735,647...75,817,382
Ensembl chr 5:75,735,576...75,817,382
JBrowse link
G Myo5a myosin VA IEA MGI NCBI chr 9:74,975,183...75,130,970
Ensembl chr 9:74,978,297...75,130,970
JBrowse link
G Polh polymerase (DNA directed), eta (RAD 30 related) IAGP MGI PMID:16397220 NCBI chr17:46,482,281...46,513,567
Ensembl chr17:46,482,281...46,513,571
JBrowse link
G Slc24a5 solute carrier family 24, member 5 IAGP MGI PMID:18424845 NCBI chr 2:124,910,047...124,930,597
Ensembl chr 2:124,910,044...124,930,597
JBrowse link
abnormal ear position term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdh23 cadherin 23 (otocadherin) IEA MGI NCBI chr10:60,138,527...60,532,291
Ensembl chr10:60,138,527...60,532,269
JBrowse link
G Chrd chordin IAGP MGI PMID:12810603 PMID:19247433 NCBI chr16:20,551,492...20,561,134
Ensembl chr16:20,551,877...20,561,134
JBrowse link
G Fgfr1 fibroblast growth factor receptor 1 IEA MGI NCBI chr 8:26,008,775...26,065,734
Ensembl chr 8:26,003,670...26,065,734
JBrowse link
G Gli3 GLI-Kruppel family member GLI3 IAGP MGI PMID:8387379 NCBI chr13:15,638,308...15,904,611
Ensembl chr13:15,637,820...15,904,611
JBrowse link
G Hmx1 H6 homeobox 1 IAGP MGI PMID:16024820 PMID:19379485 NCBI chr 5:35,546,124...35,557,629
Ensembl chr 5:35,546,452...35,557,074
JBrowse link
G Htt huntingtin IAGP MGI PMID:9398841 NCBI chr 5:34,919,084...35,069,878
Ensembl chr 5:34,919,084...35,069,878
JBrowse link
G Itgb1 integrin beta 1 (fibronectin receptor beta) IAGP MGI PMID:10921880 NCBI chr 8:129,412,135...129,460,060
Ensembl chr 8:129,412,135...129,459,681
JBrowse link
G Kat6b K(lysine) acetyltransferase 6B IAGP MGI PMID:10821753 PMID:21804188 NCBI chr14:21,549,284...21,722,546
Ensembl chr14:21,531,502...21,722,546
JBrowse link
G Kras Kirsten rat sarcoma viral oncogene homolog IAGP MGI PMID:25359213 NCBI chr 6:145,162,425...145,196,144
Ensembl chr 6:145,162,425...145,195,965
JBrowse link
G Lrba LPS-responsive beige-like anchor IEA MGI NCBI chr 3:86,130,763...86,690,001
Ensembl chr 3:86,131,987...86,689,999
JBrowse link
G Prrx1 paired related homeobox 1 IAGP MGI PMID:9876178 NCBI chr 1:163,072,688...163,142,714
Ensembl chr 1:163,072,688...163,141,279
JBrowse link
G Prrx2 paired related homeobox 2 IAGP MGI PMID:9876178 NCBI chr 2:30,735,076...30,771,263
Ensembl chr 2:30,724,984...30,771,263
JBrowse link
G Tbx15 T-box 15 IAGP MGI PMID:15652702 PMID:15728667 NCBI chr 3:99,147,671...99,261,576
Ensembl chr 3:99,147,697...99,261,575
JBrowse link
G Zic3 zinc finger protein of the cerebellum 3 IAGP MGI PMID:17127413 NCBI chr  X:57,075,988...57,081,990
Ensembl chr  X:57,068,060...57,087,096
JBrowse link
abnormal ear shape term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apc APC, WNT signaling pathway regulator IAGP MGI PMID:17002498 NCBI chr18:34,353,350...34,455,243
Ensembl chr18:34,353,977...34,455,605
JBrowse link
G Bmp5 bone morphogenetic protein 5 IEA MGI NCBI chr 9:75,682,647...75,807,598
Ensembl chr 9:75,682,646...75,807,592
JBrowse link
G Bmpr1a bone morphogenetic protein receptor, type 1A IAGP MGI PMID:15492776 NCBI chr14:34,133,018...34,225,335
Ensembl chr14:34,132,691...34,225,298
JBrowse link
G Ednra endothelin receptor type A IAGP MGI PMID:27671791 NCBI chr 8:78,389,658...78,451,081
Ensembl chr 8:78,389,660...78,451,093
JBrowse link
G Fgfr1 fibroblast growth factor receptor 1 IAGP MGI PMID:15630379 NCBI chr 8:26,008,775...26,065,734
Ensembl chr 8:26,003,670...26,065,734
JBrowse link
G Frem2 Fras1 related extracellular matrix protein 2 IEA MGI NCBI chr 3:53,421,359...53,566,014
Ensembl chr 3:53,421,359...53,564,776
JBrowse link
G H2az2 H2A.Z histone variant 2 IAGP MGI PMID:32541010 NCBI chr11:6,377,226...6,394,511
Ensembl chr11:6,377,229...6,394,443
JBrowse link
G Htt huntingtin IAGP MGI PMID:9398841 NCBI chr 5:34,919,084...35,069,878
Ensembl chr 5:34,919,084...35,069,878
JBrowse link
G Itgb1 integrin beta 1 (fibronectin receptor beta) IAGP MGI PMID:10921880 NCBI chr 8:129,412,135...129,460,060
Ensembl chr 8:129,412,135...129,459,681
JBrowse link
G Kmt2d lysine (K)-specific methyltransferase 2D IAGP MGI PMID:32541010 NCBI chr15:98,729,550...98,771,958
Ensembl chr15:98,729,550...98,769,085
JBrowse link
G Tbx1 T-box 1 IAGP MGI PMID:11242110 NCBI chr16:18,399,729...18,409,421
Ensembl chr16:18,399,729...18,409,421
JBrowse link
abnormal external auditory canal morphology term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctsl cathepsin L IAGP MGI PMID:12163394 NCBI chr13:64,509,704...64,518,586
Ensembl chr13:64,507,151...64,518,704
JBrowse link
G Dlx5 distal-less homeobox 5 IAGP MGI PMID:10433912 NCBI chr 6:6,877,801...6,882,068
Ensembl chr 6:6,877,805...6,882,085
JBrowse link
G Eya1 EYA transcriptional coactivator and phosphatase 1 IAGP MGI PMID:10471511 NCBI chr 1:14,239,177...14,381,259
Ensembl chr 1:14,239,178...14,380,459
JBrowse link
G Gsc goosecoid homeobox IAGP MGI PMID:7555726 NCBI chr12:104,437,468...104,439,495
Ensembl chr12:104,437,468...104,439,589
JBrowse link
G Hoxa2 homeobox A2 IAGP MGI PMID:8565828 NCBI chr 6:52,139,397...52,141,811
Ensembl chr 6:52,139,397...52,141,811
JBrowse link
G Idua iduronidase, alpha-L IAGP MGI PMID:15111796 NCBI chr 5:108,808,197...108,833,312
Ensembl chr 5:108,808,197...108,832,423
JBrowse link
G Morc2a microrchidia 2A IEA MGI NCBI chr11:3,599,132...3,640,477
Ensembl chr11:3,599,191...3,640,477
JBrowse link
G Msx1 msh homeobox 1 IAGP MGI PMID:12701100 NCBI chr 5:37,977,835...37,981,929
Ensembl chr 5:37,977,829...37,981,927
JBrowse link
G Msx2 msh homeobox 2 IAGP MGI PMID:12701100 NCBI chr13:53,620,917...53,626,816
Ensembl chr13:53,620,920...53,627,110
JBrowse link
G Pax8 paired box 8 IAGP MGI PMID:14981357 NCBI chr 2:24,310,563...24,365,611
Ensembl chr 2:24,310,572...24,365,611
JBrowse link
G Prkra protein kinase, interferon inducible double stranded RNA dependent activator IAGP MGI PMID:16571658 NCBI chr 2:76,436,385...76,478,614
Ensembl chr 2:76,460,242...76,478,359
JBrowse link
G Psph phosphoserine phosphatase IEA MGI NCBI chr 5:129,842,622...129,864,318
Ensembl chr 5:129,842,622...129,864,513
JBrowse link
G Sfn stratifin IAGP MGI PMID:6643653 NCBI chr 4:133,327,867...133,329,479
Ensembl chr 4:133,327,867...133,329,479
JBrowse link
G Tbx1 T-box 1 IAGP MGI PMID:15652707 NCBI chr16:18,399,729...18,409,421
Ensembl chr16:18,399,729...18,409,421
JBrowse link
G Tshz1 teashirt zinc finger family member 1 IAGP MGI PMID:17586487 NCBI chr18:84,029,752...84,105,833
Ensembl chr18:84,029,752...84,105,831
JBrowse link
abnormal outer ear cartilage morphology term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp5 bone morphogenetic protein 5 IEA MGI NCBI chr 9:75,682,647...75,807,598
Ensembl chr 9:75,682,646...75,807,592
JBrowse link
G Dlx5 distal-less homeobox 5 IAGP MGI PMID:10433912 NCBI chr 6:6,877,801...6,882,068
Ensembl chr 6:6,877,805...6,882,085
JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 IAGP MGI PMID:24770645 NCBI chr10:24,513,812...24,588,057
Ensembl chr10:24,513,812...24,588,057
JBrowse link
G Pstpip2 proline-serine-threonine phosphatase-interacting protein 2 IAGP MGI PMID:16122996 NCBI chr18:77,882,250...77,971,462
Ensembl chr18:77,877,614...77,970,579
JBrowse link
abnormal outer ear helix morphology term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ednra endothelin receptor type A IAGP MGI PMID:27671791 NCBI chr 8:78,389,658...78,451,081
Ensembl chr 8:78,389,660...78,451,093
JBrowse link
abnormal outer ear skin morphology term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plat plasminogen activator, tissue IAGP MGI PMID:8133887 NCBI chr 8:23,247,655...23,272,864
Ensembl chr 8:23,247,743...23,272,860
JBrowse link
G Plau plasminogen activator, urokinase IAGP MGI PMID:8133887 NCBI chr14:20,886,730...20,893,456
Ensembl chr14:20,886,728...20,893,453
JBrowse link
abnormal pinna cartilage morphology term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Edil3 EGF-like repeats and discoidin I-like domains 3 IAGP MGI PMID:27505251 NCBI chr13:88,969,591...89,471,344
Ensembl chr13:88,969,591...89,471,342
JBrowse link
G Lamc2 laminin, gamma 2 IAGP MGI PMID:20336083 NCBI chr 1:152,998,502...153,062,193
Ensembl chr 1:152,998,502...153,062,193
JBrowse link
absent external auditory canal term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ece1 endothelin converting enzyme 1 IAGP MGI PMID:9449665 NCBI chr 4:137,589,548...137,692,540
Ensembl chr 4:137,589,548...137,692,540
JBrowse link
G Eya1 EYA transcriptional coactivator and phosphatase 1 IAGP MGI PMID:10471511 NCBI chr 1:14,239,177...14,381,259
Ensembl chr 1:14,239,178...14,380,459
JBrowse link
G Gsc goosecoid homeobox IAGP MGI PMID:7555718 PMID:10512191 NCBI chr12:104,437,468...104,439,495
Ensembl chr12:104,437,468...104,439,589
JBrowse link
G Morc2a microrchidia 2A IEA MGI NCBI chr11:3,599,132...3,640,477
Ensembl chr11:3,599,191...3,640,477
JBrowse link
G Msx1 msh homeobox 1 IAGP MGI PMID:10512191 NCBI chr 5:37,977,835...37,981,929
Ensembl chr 5:37,977,829...37,981,927
JBrowse link
G Psph phosphoserine phosphatase IEA MGI NCBI chr 5:129,842,622...129,864,318
Ensembl chr 5:129,842,622...129,864,513
JBrowse link
absent outer ear term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnnb1 catenin (cadherin associated protein), beta 1 IAGP MGI PMID:21087601 NCBI chr 9:120,762,466...120,789,573
Ensembl chr 9:120,758,282...120,789,573
JBrowse link
G Edn1 endothelin 1 IAGP MGI PMID:8152482 NCBI chr13:42,454,952...42,461,466
Ensembl chr13:42,454,952...42,461,466
JBrowse link
G Eya1 EYA transcriptional coactivator and phosphatase 1 IAGP MGI PMID:10471511 NCBI chr 1:14,239,177...14,381,259
Ensembl chr 1:14,239,178...14,380,459
JBrowse link
G Foxg1 forkhead box G1 IAGP MGI PMID:16452092 PMID:16600992 NCBI chr12:49,429,666...49,433,650
Ensembl chr12:49,429,443...49,433,644
JBrowse link
G Foxi3 forkhead box I3 IAGP MGI PMID:24650709 NCBI chr 6:70,933,590...70,938,050
Ensembl chr 6:70,933,515...70,938,050
JBrowse link
G Frem2 Fras1 related extracellular matrix protein 2 IAGP MGI PMID:16087869 NCBI chr 3:53,421,359...53,566,014
Ensembl chr 3:53,421,359...53,564,776
JBrowse link
G H2az2 H2A.Z histone variant 2 IAGP MGI PMID:16221728 PMID:18952847 PMID:24785830 NCBI chr11:6,377,226...6,394,511
Ensembl chr11:6,377,229...6,394,443
JBrowse link
G Hoxa1 homeobox A1 IAGP MGI PMID:10529419 NCBI chr 6:52,132,347...52,135,297
Ensembl chr 6:52,132,570...52,135,297
JBrowse link
G Hoxa2 homeobox A2 IAGP MGI PMID:7903601 PMID:10529419 PMID:11578867 PMID:16221728 NCBI chr 6:52,139,397...52,141,811
Ensembl chr 6:52,139,397...52,141,811
JBrowse link
G Irf6 interferon regulatory factor 6 IAGP MGI PMID:17041601 NCBI chr 1:192,835,420...192,854,344
Ensembl chr 1:192,835,419...192,854,331
JBrowse link
G Mapk1 mitogen-activated protein kinase 1 IAGP MGI PMID:18952847 NCBI chr16:16,801,246...16,865,317
Ensembl chr16:16,801,246...16,865,317
JBrowse link
G Mapk3 mitogen-activated protein kinase 3 IAGP MGI PMID:18952847 NCBI chr 7:126,358,798...126,364,988
Ensembl chr 7:126,358,773...126,364,991
JBrowse link
G Pax8 paired box 8 IAGP MGI PMID:14981357 NCBI chr 2:24,310,563...24,365,611
Ensembl chr 2:24,310,572...24,365,611
JBrowse link
G Rara retinoic acid receptor, alpha IAGP MGI PMID:7607067 NCBI chr11:98,818,626...98,865,768
Ensembl chr11:98,818,644...98,865,768
JBrowse link
G Rarg retinoic acid receptor, gamma IAGP MGI PMID:7607067 NCBI chr15:102,143,373...102,165,957
Ensembl chr15:102,143,373...102,165,952
JBrowse link
G Tbx1 T-box 1 IAGP MGI PMID:11242110 PMID:16452092 PMID:16600992 NCBI chr16:18,399,729...18,409,421
Ensembl chr16:18,399,729...18,409,421
JBrowse link
G Tfap2a transcription factor AP-2, alpha IAGP MGI PMID:8622765 PMID:8622766 NCBI chr13:40,867,278...40,891,715
Ensembl chr13:40,868,778...40,891,852
JBrowse link
anotia term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chuk conserved helix-loop-helix ubiquitous kinase IAGP MGI PMID:10195896 NCBI chr19:44,061,773...44,095,940
Ensembl chr19:44,061,774...44,095,919
JBrowse link
G Eya1 EYA transcriptional coactivator and phosphatase 1 IAGP MGI PMID:10471511 NCBI chr 1:14,239,177...14,381,259
Ensembl chr 1:14,239,178...14,380,459
JBrowse link
G Gpr161 G protein-coupled receptor 161 IAGP MGI PMID:34887903 NCBI chr 1:165,108,760...165,154,314
Ensembl chr 1:165,123,358...165,154,314
JBrowse link
G H2az2 H2A.Z histone variant 2 IAGP MGI PMID:34887903 NCBI chr11:6,377,226...6,394,511
Ensembl chr11:6,377,229...6,394,443
JBrowse link
G Prrx1 paired related homeobox 1 IAGP MGI PMID:9729491 NCBI chr 1:163,072,688...163,142,714
Ensembl chr 1:163,072,688...163,141,279
JBrowse link
G Prrx2 paired related homeobox 2 IAGP MGI PMID:9729491 NCBI chr 2:30,735,076...30,771,263
Ensembl chr 2:30,724,984...30,771,263
JBrowse link
G Six1 sine oculis-related homeobox 1 IAGP MGI PMID:15788460 NCBI chr12:73,088,601...73,093,486
Ensembl chr12:73,086,789...73,100,661
JBrowse link
G Six4 sine oculis-related homeobox 4 IAGP MGI PMID:15788460 NCBI chr12:73,146,383...73,160,805
Ensembl chr12:73,146,383...73,160,230
JBrowse link
G Tbx1 T-box 1 IAGP MGI PMID:15190012 PMID:15469978 NCBI chr16:18,399,729...18,409,421
Ensembl chr16:18,399,729...18,409,421
JBrowse link
anteriorly rotated ears term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ednra endothelin receptor type A IAGP MGI PMID:19017795 NCBI chr 8:78,389,658...78,451,081
Ensembl chr 8:78,389,660...78,451,093
JBrowse link
big ears term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Edaradd EDAR (ectodysplasin-A receptor)-associated death domain IEA MGI NCBI chr13:12,486,090...12,535,413
Ensembl chr13:12,487,513...12,535,319
JBrowse link
G Gsdma3 gasdermin A3 IEA MGI NCBI chr11:98,517,175...98,529,627
Ensembl chr11:98,517,186...98,529,052
JBrowse link
G Kmt2a lysine (K)-specific methyltransferase 2A IAGP MGI PMID:16551973 NCBI chr 9:44,714,652...44,793,492
Ensembl chr 9:44,714,652...44,792,594
JBrowse link
G Msx2 msh homeobox 2 IAGP MGI PMID:10742104 NCBI chr13:53,620,917...53,626,816
Ensembl chr13:53,620,920...53,627,110
JBrowse link
cup-shaped ears term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tcof1 treacle ribosome biogenesis factor 1 IAGP MGI PMID:10888597 NCBI chr18:60,946,827...60,982,055
Ensembl chr18:60,946,827...60,982,043
JBrowse link
decreased ear pigmentation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G a nonagouti IAGP MGI PMID:10431243 NCBI chr 2:154,792,519...154,892,932
Ensembl chr 2:154,633,322...154,892,932
Ensembl chr 2:154,633,322...154,892,932
JBrowse link
G Ap3b1 adaptor-related protein complex 3, beta 1 subunit IEA MGI NCBI chr13:94,492,332...94,702,838
Ensembl chr13:94,495,468...94,702,825
JBrowse link
G Bloc1s3 biogenesis of lysosomal organelles complex-1, subunit 3 IAGP MGI PMID:7203014 NCBI chr 7:19,239,708...19,242,295
Ensembl chr 7:19,238,411...19,242,292
JBrowse link
G Hps1 HPS1, biogenesis of lysosomal organelles complex 3 subunit 1 IAGP MGI PMID:6031677 PMID:12847290 NCBI chr19:42,743,629...42,770,013
Ensembl chr19:42,743,544...42,768,417
JBrowse link
G Hps4 HPS4, biogenesis of lysosomal organelles complex 3 subunit 2 IAGP MGI PMID:864040 NCBI chr 5:112,490,849...112,526,290
Ensembl chr 5:112,490,949...112,526,280
JBrowse link
G Hps5 HPS5, biogenesis of lysosomal organelles complex 2 subunit 2 IEA MGI NCBI chr 7:46,409,890...46,445,501
Ensembl chr 7:46,409,890...46,445,488
JBrowse link
G Hps6 HPS6, biogenesis of lysosomal organelles complex 2 subunit 3 IEA MGI NCBI chr19:45,991,917...45,994,612
Ensembl chr19:45,991,947...45,994,612
JBrowse link
G Kit KIT proto-oncogene receptor tyrosine kinase IEA MGI NCBI chr 5:75,735,647...75,817,382
Ensembl chr 5:75,735,576...75,817,382
JBrowse link
G Kitl kit ligand IEA MGI NCBI chr10:99,851,477...99,936,278
Ensembl chr10:99,851,492...99,936,278
JBrowse link
G Lyst lysosomal trafficking regulator IEA MGI NCBI chr13:13,764,896...13,953,388
Ensembl chr13:13,764,982...13,953,388
JBrowse link
G Mc1r melanocortin 1 receptor IAGP MGI PMID:15653560 NCBI chr 8:124,133,821...124,137,483
Ensembl chr 8:124,133,846...124,137,483
JBrowse link
G Mitf melanogenesis associated transcription factor IAGP MGI PMID:8947051 PMID:11929848 NCBI chr 6:97,783,966...97,998,321
Ensembl chr 6:97,784,013...97,998,310
JBrowse link
G Oca2 oculocutaneous albinism II IEA MGI NCBI chr 7:55,889,341...56,186,266
Ensembl chr 7:55,889,508...56,186,266
JBrowse link
G Pde6b phosphodiesterase 6B, cGMP, rod receptor, beta polypeptide IAGP MGI PMID:864040 NCBI chr 5:108,536,239...108,579,609
Ensembl chr 5:108,536,257...108,580,263
JBrowse link
G Tyr tyrosinase IEA MGI NCBI chr 7:87,073,979...87,142,720
Ensembl chr 7:87,073,979...87,142,720
JBrowse link
G Tyrp1 tyrosinase-related protein 1 IEA MGI NCBI chr 4:80,752,360...80,769,973
Ensembl chr 4:80,752,360...80,769,956
JBrowse link
delayed ear emergence term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ache acetylcholinesterase IAGP MGI PMID:10869390 NCBI chr 5:137,286,516...137,292,728
Ensembl chr 5:137,285,781...137,292,728
JBrowse link
G Chrnb2 cholinergic receptor, nicotinic, beta polypeptide 2 (neuronal) IAGP MGI PMID:10531434 NCBI chr 3:89,660,755...89,671,939
Ensembl chr 3:89,653,502...89,671,939
JBrowse link
G Chrnb4 cholinergic receptor, nicotinic, beta polypeptide 4 IAGP MGI PMID:10531434 NCBI chr 9:54,935,438...54,956,236
Ensembl chr 9:54,935,438...54,956,063
JBrowse link
G Foxp2 forkhead box P2 IAGP MGI PMID:15983371 NCBI chr 6:14,901,348...15,441,976
Ensembl chr 6:14,901,348...15,441,976
JBrowse link
G Hoxa5 homeobox A5 IAGP MGI PMID:12815622 NCBI chr 6:52,178,734...52,181,567
Ensembl chr 6:52,178,734...52,181,567
JBrowse link
G Pax8 paired box 8 IAGP MGI PMID:25127920 NCBI chr 2:24,310,563...24,365,611
Ensembl chr 2:24,310,572...24,365,611
JBrowse link
ear lobe hypoplasia term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mesp1 mesoderm posterior 1 IAGP MGI PMID:16914493 NCBI chr 7:79,441,989...79,443,338
Ensembl chr 7:79,441,989...79,443,536
JBrowse link
G Tbx1 T-box 1 IAGP MGI PMID:16914493 NCBI chr16:18,399,729...18,409,421
Ensembl chr16:18,399,729...18,409,421
JBrowse link
excessive cerumen term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fbxo11 F-box protein 11 IAGP MGI PMID:12943368 NCBI chr17:88,298,287...88,373,473
Ensembl chr17:88,298,287...88,372,719
JBrowse link
G Fgfr1 fibroblast growth factor receptor 1 IAGP MGI PMID:15630379 NCBI chr 8:26,008,775...26,065,734
Ensembl chr 8:26,003,670...26,065,734
JBrowse link
G Isl1 ISL1 transcription factor, LIM/homeodomain IAGP MGI PMID:21936904 NCBI chr13:116,434,806...116,446,224
Ensembl chr13:116,434,817...116,446,225
JBrowse link
external auditory canal stenosis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pax8 paired box 8 IAGP MGI PMID:14981357 NCBI chr 2:24,310,563...24,365,611
Ensembl chr 2:24,310,572...24,365,611
JBrowse link
floppy ears term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Edil3 EGF-like repeats and discoidin I-like domains 3 IAGP MGI PMID:27505251 NCBI chr13:88,969,591...89,471,344
Ensembl chr13:88,969,591...89,471,342
JBrowse link
increased ear pigmentation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acd adrenocortical dysplasia IEA MGI NCBI chr 8:106,424,787...106,427,860
Ensembl chr 8:106,422,492...106,427,734
JBrowse link
G Apc APC, WNT signaling pathway regulator IAGP MGI PMID:17002498 NCBI chr18:34,353,350...34,455,243
Ensembl chr18:34,353,977...34,455,605
JBrowse link
G Cbl Casitas B-lineage lymphoma IAGP MGI PMID:16211006 NCBI chr 9:44,054,273...44,145,556
Ensembl chr 9:44,054,273...44,145,346
JBrowse link
G Csnk1a1 casein kinase 1, alpha 1 IAGP MGI PMID:28878021 NCBI chr18:61,687,307...61,723,391
Ensembl chr18:61,688,345...61,723,132
JBrowse link
G Gna11 guanine nucleotide binding protein, alpha 11 IAGP MGI PMID:12533510 PMID:28194446 NCBI chr10:81,364,558...81,380,996
Ensembl chr10:81,364,558...81,381,024
JBrowse link
G Gnaq guanine nucleotide binding protein, alpha q polypeptide IAGP MGI PMID:12533510 PMID:26763459 NCBI chr19:16,110,048...16,365,884
Ensembl chr19:16,110,195...16,364,827
JBrowse link
G Kitl kit ligand IAGP MGI PMID:8875893 PMID:9360640 NCBI chr10:99,851,477...99,936,278
Ensembl chr10:99,851,492...99,936,278
JBrowse link
G Krt2 keratin 2 IAGP MGI PMID:12533510 PMID:24751727 NCBI chr15:101,719,124...101,727,391
Ensembl chr15:101,719,124...101,726,604
JBrowse link
G Nf1 neurofibromin 1 IAGP MGI PMID:12533510 NCBI chr11:79,223,541...79,472,435
Ensembl chr11:79,230,519...79,472,438
JBrowse link
G Rpl27a ribosomal protein L27A IAGP MGI PMID:21674502 NCBI chr 7:109,118,402...109,121,576
Ensembl chr 7:109,118,354...109,121,574
JBrowse link
G Rps19 ribosomal protein S19 IAGP MGI PMID:18641651 NCBI chr 7:24,584,017...24,589,236
Ensembl chr 7:24,583,796...24,589,231
JBrowse link
G Rps20 ribosomal protein S20 IAGP MGI PMID:18641651 NCBI chr 4:3,831,584...3,835,655
Ensembl chr 4:3,831,334...3,835,665
JBrowse link
G Rps6 ribosomal protein S6 IAGP MGI PMID:18641651 NCBI chr 4:86,772,336...86,775,604
Ensembl chr 4:86,772,897...86,775,649
JBrowse link
G Trp53 transformation related protein 53 IAGP MGI PMID:18641651 NCBI chr11:69,471,174...69,482,699
Ensembl chr11:69,471,185...69,482,699
JBrowse link
lowered ear position term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G a nonagouti IAGP MGI PMID:14737183 NCBI chr 2:154,792,519...154,892,932
Ensembl chr 2:154,633,322...154,892,932
Ensembl chr 2:154,633,322...154,892,932
JBrowse link
G Arid1a AT rich interactive domain 1A (SWI-like) IAGP MGI PMID:26806701 NCBI chr 4:133,406,319...133,484,682
Ensembl chr 4:133,406,319...133,484,080
JBrowse link
G Bmp4 bone morphogenetic protein 4 IAGP MGI PMID:14681194 NCBI chr14:46,620,982...46,628,126
Ensembl chr14:46,620,977...46,628,126
JBrowse link
G Bmp5 bone morphogenetic protein 5 IEA MGI NCBI chr 9:75,682,647...75,807,598
Ensembl chr 9:75,682,646...75,807,592
JBrowse link
G Ednra endothelin receptor type A IAGP MGI PMID:27671791 NCBI chr 8:78,389,658...78,451,081
Ensembl chr 8:78,389,660...78,451,093
JBrowse link
G Fgfr1 fibroblast growth factor receptor 1 IAGP MGI PMID:15630379 NCBI chr 8:26,008,775...26,065,734
Ensembl chr 8:26,003,670...26,065,734
JBrowse link
G Foxh1 forkhead box H1 IEA MGI NCBI chr15:76,552,029...76,554,286
Ensembl chr15:76,552,425...76,554,148
JBrowse link
G H2az2 H2A.Z histone variant 2 IAGP MGI PMID:19706403 PMID:24700590 PMID:26806701 NCBI chr11:6,377,226...6,394,511
Ensembl chr11:6,377,229...6,394,443
JBrowse link
G Hic1 hypermethylated in cancer 1 IAGP MGI PMID:10655551 NCBI chr11:75,052,203...75,061,081
Ensembl chr11:75,055,391...75,060,345
JBrowse link
G Hmx1 H6 homeobox 1 IAGP MGI PMID:16024820 PMID:19379485 NCBI chr 5:35,546,124...35,557,629
Ensembl chr 5:35,546,452...35,557,074
JBrowse link
G Htt huntingtin IAGP MGI PMID:9398841 NCBI chr 5:34,919,084...35,069,878
Ensembl chr 5:34,919,084...35,069,878
JBrowse link
G Lama5 laminin, alpha 5 IEA MGI NCBI chr 2:179,818,166...179,868,092
Ensembl chr 2:179,818,166...179,867,652
JBrowse link
G Mau2 MAU2 sister chromatid cohesion factor IAGP MGI PMID:24700590 NCBI chr 8:70,465,896...70,495,384
Ensembl chr 8:70,468,773...70,495,384
JBrowse link
G Ncoa3 nuclear receptor coactivator 3 IAGP MGI PMID:11087842 NCBI chr 2:165,834,557...165,915,162
Ensembl chr 2:165,834,556...165,915,162
JBrowse link
G Ndst1 N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1 IEA MGI NCBI chr18:60,817,566...60,907,465
Ensembl chr18:60,817,566...60,881,722
JBrowse link
G Nipbl NIPBL cohesin loading factor IAGP MGI PMID:24700590 NCBI chr15:8,319,308...8,494,799
Ensembl chr15:8,320,101...8,473,947
JBrowse link
G Pax6 paired box 6 IAGP MGI PMID:3794606 NCBI chr 2:105,499,241...105,528,755
Ensembl chr 2:105,499,245...105,527,709
JBrowse link
G Prrx1 paired related homeobox 1 IAGP MGI PMID:7758948 NCBI chr 1:163,072,688...163,142,714
Ensembl chr 1:163,072,688...163,141,279
JBrowse link
G Tbx1 T-box 1 IAGP MGI PMID:11242110 NCBI chr16:18,399,729...18,409,421
Ensembl chr16:18,399,729...18,409,421
JBrowse link
G Tbx15 T-box 15 IAGP MGI PMID:14737183 NCBI chr 3:99,147,671...99,261,576
Ensembl chr 3:99,147,697...99,261,575
JBrowse link
G Tcf15 transcription factor 15 IAGP MGI PMID:8955271 NCBI chr 2:151,984,973...151,991,017
Ensembl chr 2:151,985,481...151,991,017
JBrowse link
G Tcof1 treacle ribosome biogenesis factor 1 IAGP MGI PMID:10888597 NCBI chr18:60,946,827...60,982,055
Ensembl chr18:60,946,827...60,982,043
JBrowse link
G Twist2 twist basic helix-loop-helix transcription factor 2 IAGP MGI PMID:20691403 NCBI chr 1:91,729,183...91,775,756
Ensembl chr 1:91,729,183...91,775,750
JBrowse link
G Twsg1 twisted gastrulation BMP signaling modulator 1 IAGP MGI PMID:14681194 PMID:16289463 NCBI chr17:66,230,060...66,258,198
Ensembl chr17:66,228,967...66,258,221
JBrowse link
G Zic3 zinc finger protein of the cerebellum 3 IAGP MGI PMID:17127413 NCBI chr  X:57,075,988...57,081,990
Ensembl chr  X:57,068,060...57,087,096
JBrowse link
otic hypertelorism term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Crkl v-crk avian sarcoma virus CT10 oncogene homolog-like IAGP MGI PMID:11242111 NCBI chr16:17,269,849...17,305,304
Ensembl chr16:17,269,851...17,305,298
JBrowse link
outer ear hypoplasia term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G n-TUtca2 nuclear encoded tRNA selenocysteine 2 (anticodon TCA) IAGP MGI PMID:19696890 NCBI chr 7:19,035,169...19,035,255 JBrowse link
G Pbx1 pre B cell leukemia homeobox 1 IAGP MGI PMID:11566859 NCBI chr 1:167,946,933...168,259,898
Ensembl chr 1:167,946,933...168,259,839
JBrowse link
G Prrx1 paired related homeobox 1 IAGP MGI PMID:9876178 NCBI chr 1:163,072,688...163,142,714
Ensembl chr 1:163,072,688...163,141,279
JBrowse link
G Prrx2 paired related homeobox 2 IAGP MGI PMID:9876178 NCBI chr 2:30,735,076...30,771,263
Ensembl chr 2:30,724,984...30,771,263
JBrowse link
prominent ears term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cisd2 CDGSH iron sulfur domain 2 IAGP MGI PMID:19451219 NCBI chr 3:135,112,173...135,129,194
Ensembl chr 3:135,112,173...135,129,686
JBrowse link
G Lmna lamin A IAGP MGI PMID:12748643 NCBI chr 3:88,388,455...88,413,842
Ensembl chr 3:88,387,454...88,417,263
JBrowse link
scaly ears term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxp3 forkhead box P3 IAGP MGI PMID:2053595 PMID:12612578 NCBI chr  X:7,445,915...7,461,482
Ensembl chr  X:7,439,883...7,461,484
JBrowse link
G Krt10 keratin 10 IAGP MGI PMID:8603923 NCBI chr11:99,276,080...99,288,631
Ensembl chr11:99,276,080...99,280,190
JBrowse link
short ears term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl2 B cell leukemia/lymphoma 2 IAGP MGI PMID:11709185 NCBI chr 1:106,465,906...106,642,020
Ensembl chr 1:106,465,908...106,642,004
JBrowse link
G Bmp5 bone morphogenetic protein 5 IAGP MGI PMID:1339316 PMID:5556347 PMID:7710253 PMID:26234751 NCBI chr 9:75,682,647...75,807,598
Ensembl chr 9:75,682,646...75,807,592
JBrowse link
G Bmpr1a bone morphogenetic protein receptor, type 1A IAGP MGI PMID:15492776 NCBI chr14:34,133,018...34,225,335
Ensembl chr14:34,132,691...34,225,298
JBrowse link
G Flg filaggrin IAGP MGI PMID:4557539 NCBI chr 3:93,180,853...93,200,996
Ensembl chr 3:93,180,830...93,200,993
JBrowse link
G Lmna lamin A IAGP MGI PMID:20376364 NCBI chr 3:88,388,455...88,413,842
Ensembl chr 3:88,387,454...88,417,263
JBrowse link
G Myo6 myosin VI IEA MGI NCBI chr 9:80,072,262...80,219,011
Ensembl chr 9:80,072,313...80,219,011
JBrowse link
small ears term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G 4930453N24Rik RIKEN cDNA 4930453N24 gene IAGP MGI PMID:8830097 NCBI chr16:64,583,267...64,592,735
Ensembl chr16:64,572,114...64,591,524
JBrowse link
G Bcl2 B cell leukemia/lymphoma 2 IAGP MGI PMID:7812968 PMID:8170972 PMID:8402909 NCBI chr 1:106,465,906...106,642,020
Ensembl chr 1:106,465,908...106,642,004
JBrowse link
G Bmp5 bone morphogenetic protein 5 IAGP MGI PMID:1339316 PMID:5556347 PMID:9071596 PMID:9475750 PMID:12644183 NCBI chr 9:75,682,647...75,807,598
Ensembl chr 9:75,682,646...75,807,592
JBrowse link
G Ccn2 cellular communication network factor 2 IAGP MGI PMID:20877562 NCBI chr10:24,471,340...24,474,581
Ensembl chr10:24,471,340...24,474,581
JBrowse link
G Chrd chordin IAGP MGI PMID:12810603 NCBI chr16:20,551,492...20,561,134
Ensembl chr16:20,551,877...20,561,134
JBrowse link
G Dscam DS cell adhesion molecule IAGP MGI PMID:21904980 NCBI chr16:96,388,652...96,971,935
Ensembl chr16:96,392,040...96,971,952
JBrowse link
G Fgf10 fibroblast growth factor 10 IAGP MGI PMID:12761848 NCBI chr13:118,851,235...118,929,109
Ensembl chr13:118,806,327...118,928,651
JBrowse link
G Fgf8 fibroblast growth factor 8 IAGP MGI PMID:15996652 NCBI chr19:45,724,930...45,731,506
Ensembl chr19:45,725,237...45,731,354
JBrowse link
G Fgfr1 fibroblast growth factor receptor 1 IAGP MGI PMID:12514106 PMID:15630379 PMID:21479780 NCBI chr 8:26,008,775...26,065,734
Ensembl chr 8:26,003,670...26,065,734
JBrowse link
G Flg filaggrin IAGP MGI PMID:4557539 NCBI chr 3:93,180,853...93,200,996
Ensembl chr 3:93,180,830...93,200,993
JBrowse link
G Foxp3 forkhead box P3 IAGP MGI PMID:2053595 PMID:2320565 NCBI chr  X:7,445,915...7,461,482
Ensembl chr  X:7,439,883...7,461,484
JBrowse link
G Frem2 Fras1 related extracellular matrix protein 2 IAGP MGI PMID:16087869 NCBI chr 3:53,421,359...53,566,014
Ensembl chr 3:53,421,359...53,564,776
JBrowse link
G Gbx2 gastrulation brain homeobox 2 IAGP MGI PMID:15996652 NCBI chr 1:89,855,684...89,858,898
Ensembl chr 1:89,855,678...89,858,901
JBrowse link
G Gpr161 G protein-coupled receptor 161 IAGP MGI PMID:34887903 NCBI chr 1:165,108,760...165,154,314
Ensembl chr 1:165,123,358...165,154,314
JBrowse link
G H2az2 H2A.Z histone variant 2 IAGP MGI PMID:19541608 PMID:34887903 NCBI chr11:6,377,226...6,394,511
Ensembl chr11:6,377,229...6,394,443
JBrowse link
G Hic1 hypermethylated in cancer 1 IAGP MGI PMID:10655551 NCBI chr11:75,052,203...75,061,081
Ensembl chr11:75,055,391...75,060,345
JBrowse link
G Hmga2 high mobility group AT-hook 2 IAGP MGI PMID:2305264 PMID:14794889 NCBI chr10:120,197,173...120,312,374
Ensembl chr10:120,197,180...120,312,374
JBrowse link
G Hoxa1 homeobox A1 IAGP MGI PMID:10529419 NCBI chr 6:52,132,347...52,135,297
Ensembl chr 6:52,132,570...52,135,297
JBrowse link
G Hoxa2 homeobox A2 IAGP MGI PMID:10529419 PMID:16221728 NCBI chr 6:52,139,397...52,141,811
Ensembl chr 6:52,139,397...52,141,811
JBrowse link
G Idua iduronidase, alpha-L IAGP MGI PMID:17920451 NCBI chr 5:108,808,197...108,833,312
Ensembl chr 5:108,808,197...108,832,423
JBrowse link
G Itpr3 inositol 1,4,5-triphosphate receptor 3 IAGP MGI PMID:26234751 NCBI chr17:27,275,976...27,341,197
Ensembl chr17:27,276,278...27,341,197
JBrowse link
G Mmp14 matrix metallopeptidase 14 (membrane-inserted) IEA MGI NCBI chr14:54,669,055...54,679,913
Ensembl chr14:54,669,069...54,682,821
JBrowse link
G Pax6 paired box 6 IAGP MGI PMID:3794606 NCBI chr 2:105,499,241...105,528,755
Ensembl chr 2:105,499,245...105,527,709
JBrowse link
G Pax8 paired box 8 IAGP MGI PMID:14981357 NCBI chr 2:24,310,563...24,365,611
Ensembl chr 2:24,310,572...24,365,611
JBrowse link
G Prkdc protein kinase, DNA activated, catalytic polypeptide IAGP MGI PMID:17920451 NCBI chr16:15,455,698...15,660,103
Ensembl chr16:15,455,730...15,660,099
JBrowse link
G Prkra protein kinase, interferon inducible double stranded RNA dependent activator IAGP MGI PMID:16571658 PMID:22194846 PMID:26234751 NCBI chr 2:76,436,385...76,478,614
Ensembl chr 2:76,460,242...76,478,359
JBrowse link
G Prrx1 paired related homeobox 1 IAGP MGI PMID:9876178 NCBI chr 1:163,072,688...163,142,714
Ensembl chr 1:163,072,688...163,141,279
JBrowse link
G Prrx2 paired related homeobox 2 IAGP MGI PMID:9876178 NCBI chr 2:30,735,076...30,771,263
Ensembl chr 2:30,724,984...30,771,263
JBrowse link
G Ptpn11 protein tyrosine phosphatase, non-receptor type 11 IAGP MGI PMID:19541608 NCBI chr 5:121,268,596...121,329,460
Ensembl chr 5:121,268,596...121,329,460
JBrowse link
G Sfn stratifin IAGP MGI PMID:479550 PMID:6643653 NCBI chr 4:133,327,867...133,329,479
Ensembl chr 4:133,327,867...133,329,479
JBrowse link
G Tbx1 T-box 1 IAGP MGI PMID:15469978 NCBI chr16:18,399,729...18,409,421
Ensembl chr16:18,399,729...18,409,421
JBrowse link
G Tyrp1 tyrosinase-related protein 1 IEA MGI NCBI chr 4:80,752,360...80,769,973
Ensembl chr 4:80,752,360...80,769,956
JBrowse link
G Wnt5a wingless-type MMTV integration site family, member 5A IAGP MGI PMID:10021340 NCBI chr14:28,224,962...28,249,405
Ensembl chr14:28,226,707...28,249,405
JBrowse link
thick ears term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp5 bone morphogenetic protein 5 IEA MGI NCBI chr 9:75,682,647...75,807,598
Ensembl chr 9:75,682,646...75,807,592
JBrowse link
G Flg filaggrin IAGP MGI PMID:4557539 NCBI chr 3:93,180,853...93,200,996
Ensembl chr 3:93,180,830...93,200,993
JBrowse link
G Foxp3 forkhead box P3 IAGP MGI PMID:2053595 NCBI chr  X:7,445,915...7,461,482
Ensembl chr  X:7,439,883...7,461,484
JBrowse link
G Gt(ROSA)26Sor gene trap ROSA 26, Philippe Soriano IAGP MGI PMID:26113083 NCBI chr 6:113,044,389...113,054,205
Ensembl chr 6:113,043,843...113,054,294
JBrowse link
G Pstpip2 proline-serine-threonine phosphatase-interacting protein 2 IAGP MGI PMID:16397132 NCBI chr18:77,882,250...77,971,462
Ensembl chr18:77,877,614...77,970,579
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  mammalian phenotype 16101
    craniofacial phenotype 1544
      abnormal craniofacial morphology 1544
        abnormal outer ear morphology 160
          abnormal ear lobe morphology + 3
          abnormal ear position + 36
          abnormal ear shape + 12
          abnormal external auditory canal morphology + 19
          abnormal outer ear cartilage morphology + 6
          abnormal outer ear helix morphology 1
          abnormal outer ear skin morphology + 35
          absent outer ear + 23
          big ears 4
          delayed ear emergence 6
          ear wound + 0
          early ear unfolding 0
          excessive ear growth 0
          floppy ears 1
          hairy ears 0
          long ears 0
          ossification of pinnae 0
          outer ear necrosis 0
          scaly ears 2
          short ears 6
          small ears + 35
          thick ears 5
paths to the root