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MAMMALIAN PHENOTYPE - ANNOTATIONS

The Mouse Adult Gross Anatomy Ontology and Mammalian Phenotype Ontology are downloaded weekly from the Mouse Genome Informatics databases at Jackson Laboratories (ftp://ftp.informatics.jax.org/pub/reports/index.html). For more information about these ontologies, see the MGI Publications Page at http://www.informatics.jax.org/mgihome/other/publications.shtml.
Term:abnormal tooth morphology
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Accession:MP:0002100 term browser browse the term
Definition:any anomaly in the size, shape or structure of the hard or soft tissues of the skeletal element within the mouth that is composed of dentine and used to procure or masticate food
Synonyms:exact_synonym: abnormal teeth morphology;   abnormal tooth structure;   teeth abnormalities
 narrow_synonym: teeth: tooth dysmorphology;   tooth dysplasia
 broad_synonym: Abnormality of the dentition
 alt_id: MP:0000115;   MP:0000123
 xref: HP:0000164;   MGI:2173553


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abnormal enamel development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cftr CF transmembrane conductance regulator IMP RGD PMID:31942562 RGD:126928119 NCBI chr 4:47,422,084...47,694,646
Ensembl chr 4:47,526,735...47,694,643 		JBrowse link
G Cftrem1Ang cystic fibrosis transmembrane conductance regulator; CRISPR/Cas9 induced mutant 1, Ang IMP RGD PMID:31942562 RGD:126928119
G Cftrem2Ang cystic fibrosis transmembrane conductance regulator; CRISPR/Cas9 induced mutant 2, Ang IMP RGD PMID:31942562 RGD:126928119
abnormal incisor color term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nfe2l2 NFE2 like bZIP transcription factor 2 IMP RGD PMID:27071940 RGD:12910550 NCBI chr 3:81,001,529...81,031,165
Ensembl chr 3:81,001,529...81,029,090 		JBrowse link
G Nfe2l2em1Kyo nuclear factor, erythroid 2-like 2; zinc finger nuclease induced mutant 1, Kyoto University IMP RGD PMID:27071940 RGD:12910550
G Nfe2l2em2Kyo nuclear factor, erythroid 2-like 2; zinc finger nuclease induced mutant 2, Kyoto University IMP RGD PMID:27071940 RGD:12910550
abnormal molar cusp morphology term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Edaradd EDAR associated via death domain IAGP DNA:missense mutation:exon:p.Pro153Ser(rat) RGD PMID:22013926 RGD:14398762 NCBI chr17:92,850,791...92,894,808
Ensembl chr17:92,831,613...92,894,361 		JBrowse link
G EdaraddswhKyo EDAR-associated death domain;swh Kyo mutant IAGP DNA:missense mutation:exon:p.Pro153Ser(rat) RGD PMID:22013926 RGD:14398762
abnormal tooth color term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cftr CF transmembrane conductance regulator IMP RGD PMID:24608905 RGD:11566051 NCBI chr 4:47,422,084...47,694,646
Ensembl chr 4:47,526,735...47,694,643 		JBrowse link
G Cftrem1Sage cystic fibrosis transmembrane conductance regulator; ZFN induced mutant 1 Sage IMP RGD PMID:24608905 RGD:11566051
absent teeth term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Csf1 colony stimulating factor 1 IAGP RGD PMID:12379742 RGD:628338 NCBI chr 2:198,065,400...198,084,774
Ensembl chr 2:198,065,405...198,084,468 		JBrowse link
G Csf1tl colony stimulating factor 1; tooth less mutant IAGP RGD PMID:12379742 RGD:628338
G Csf1r colony stimulating factor 1 receptor IMP RGD PMID:33450391 RGD:126781687 NCBI chr18:56,834,152...56,860,804
Ensembl chr18:56,817,049...56,860,806 		JBrowse link
G Csf1rtm(EGFP)Tset colony stimulating factor 1 receptor; target mutant, Tset IMP RGD PMID:33450391 RGD:126781687
malocclusion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mecp2 methyl CpG binding protein 2 sexual_dimorphism IMP compared to female heterozygote mutant RGD PMID:27313794 PMID:27329765 RGD:11568037, RGD:40924662 NCBI chr  X:156,932,481...156,995,981
Ensembl chr  X:156,941,234...156,943,560 		JBrowse link
G Mecp2em1Sage methyl CpG binding protein 2; zinc finger nuclease induced mutant 1, Sigma Advanced Genetic Engineering Labs sexual_dimorphism IMP compared to female heterozygote mutant RGD PMID:27329765 PMID:27313794 RGD:40924662, RGD:11568037
microdontia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Csf1r colony stimulating factor 1 receptor IMP RGD PMID:30249809 RGD:41404725 NCBI chr18:56,834,152...56,860,804
Ensembl chr18:56,817,049...56,860,806 		JBrowse link
G Csf1rtm(EGFP)Tset colony stimulating factor 1 receptor; target mutant, Tset IMP RGD PMID:30249809 RGD:41404725
supernumerary incisors term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pax6 paired box 6 IAGP RGD PMID:16795023 RGD:12790971 NCBI chr 3:112,590,034...112,611,771
Ensembl chr 3:112,590,391...112,611,763 		JBrowse link
G Pax6Sey2 paired box gene 6, small eye mutation 2 IAGP RGD PMID:16795023 RGD:12790971
Term paths to the root
Path 1
Term Annotations click to browse term
  mammalian phenotype 5432
    craniofacial phenotype 66
      abnormal craniofacial morphology 66
        abnormal facial morphology 46
          abnormal mouth morphology 45
            abnormal tooth morphology 29
              abnormal dental pulp cavity morphology + 0
              abnormal incisor morphology + 9
              abnormal molar morphology + 4
              abnormal periodontal ligament morphology + 0
              abnormal tooth color + 9
              abnormal tooth development + 7
              abnormal tooth hard tissue morphology + 6
              abnormal tooth neck morphology + 0
              abnormal tooth number + 8
              abnormal tooth root morphology + 0
              brittle teeth 0
              carious teeth 0
              conical tooth + 0
              fused teeth + 0
              macrodontia + 0
              microdontia + 3
              misaligned teeth + 3
              tooth abscess + 0
Path 2
Term Annotations click to browse term
  mammalian phenotype 5432
    skeleton phenotype 434
      abnormal skeleton morphology 339
        abnormal axial skeleton morphology 43
          abnormal craniofacial bone morphology 37
            abnormal cranium morphology 36
              abnormal viscerocranium morphology 29
                abnormal jaw morphology 29
                  abnormal dental arch morphology 29
                    abnormal tooth morphology 29
                      abnormal dental pulp cavity morphology + 0
                      abnormal incisor morphology + 9
                      abnormal molar morphology + 4
                      abnormal periodontal ligament morphology + 0
                      abnormal tooth color + 9
                      abnormal tooth development + 7
                      abnormal tooth hard tissue morphology + 6
                      abnormal tooth neck morphology + 0
                      abnormal tooth number + 8
                      abnormal tooth root morphology + 0
                      brittle teeth 0
                      carious teeth 0
                      conical tooth + 0
                      fused teeth + 0
                      macrodontia + 0
                      microdontia + 3
                      misaligned teeth + 3
                      tooth abscess + 0
paths to the root