abnormal extraembryonic tissue morphology - Ontology Report

PMID:24586788

NCBI chr 6:5,383,386...5,433,022
Ensembl chr 6:5,383,386...5,433,022

axin 1

NCBI chr17:26,350,208...26,414,785
Ensembl chr17:26,357,662...26,414,785

Bptf

bromodomain PHD finger transcription factor

PMID:18794365

NCBI chr11:106,923,907...107,022,982
Ensembl chr11:106,923,907...107,022,953

Brca1

breast cancer 1, early onset

PMID:8674108

NCBI chr11:101,379,587...101,442,808
Ensembl chr11:101,379,590...101,442,781

Brca2

breast cancer 2, early onset

PMID:9126738 PMID:9171368

NCBI chr 5:150,445,759...150,493,612
Ensembl chr 5:150,446,095...150,493,794

Ccne1

cyclin E1

PMID:12941272 PMID:12970191

NCBI chr 7:37,797,409...37,806,915
Ensembl chr 7:37,797,409...37,806,959

Ccne2

cyclin E2

PMID:12941272 PMID:12970191

NCBI chr 4:11,190,489...11,204,779
Ensembl chr 4:11,191,351...11,204,779

cadherin 1

NCBI chr 8:107,329,982...107,396,879
Ensembl chr 8:107,329,983...107,396,878

chordin

NCBI chr16:20,551,492...20,561,134
Ensembl chr16:20,551,877...20,561,134

Cited1

Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 1

PMID:14673158

NCBI chr X:101,290,984...101,295,787
Ensembl chr X:101,290,987...101,295,787

Commd1

COMM domain containing 1

PMID:17371845

NCBI chr11:22,849,728...22,934,539
Ensembl chr11:22,846,136...22,932,382

Cops2

COP9 signalosome subunit 2

PMID:12972599

NCBI chr 2:125,672,222...125,701,002
Ensembl chr 2:125,672,224...125,701,059

Crebbp

CREB binding protein

PMID:10216070 PMID:10906457

NCBI chr16:3,899,198...4,031,864
Ensembl chr16:3,899,192...4,031,861

Ctnna1

catenin (cadherin associated protein), alpha 1

PMID:9023354

NCBI chr18:35,251,955...35,387,829
Ensembl chr18:35,251,912...35,387,832

Ctnnb1

catenin (cadherin associated protein), beta 1

PMID:8582267

NCBI chr 9:120,762,466...120,789,573
Ensembl chr 9:120,758,282...120,789,573

cullin 4B

NCBI chr X:37,620,493...37,665,073
Ensembl chr X:37,622,151...37,665,073

Cycs

cytochrome c, somatic

PMID:10830166

NCBI chr 6:50,539,543...50,543,549
Ensembl chr 6:50,539,543...50,543,518

Dab2

disabled 2, mitogen-responsive phosphoprotein

PMID:11927540

NCBI chr15:6,329,269...6,470,196
Ensembl chr15:6,329,269...6,470,193

Dad1

defender against cell death 1

PMID:10720432

NCBI chr14:54,472,942...54,491,386
Ensembl chr14:54,472,936...54,491,561

dystroglycan 1

NCBI chr 9:108,082,060...108,141,176
Ensembl chr 9:108,081,833...108,141,157

Dnajb6

DnaJ heat shock protein family (Hsp40) member B6

PMID:10021343

NCBI chr 5:29,940,896...29,991,476
Ensembl chr 5:29,940,686...30,023,132

Edil3

EGF-like repeats and discoidin I-like domains 3

PMID:26921005

NCBI chr13:88,969,591...89,471,344
Ensembl chr13:88,969,591...89,471,342

Eif3e

eukaryotic translation initiation factor 3, subunit E

PMID:30087825

NCBI chr15:43,113,436...43,146,132
Ensembl chr15:43,113,454...43,146,115

Elof1

ELF1 homolog, elongation factor 1

PMID:31276560

NCBI chr 9:22,024,282...22,028,491
Ensembl chr 9:22,024,285...22,028,468

Epb41l5

erythrocyte membrane protein band 4.1 like 5

PMID:17507402

NCBI chr 1:119,472,762...119,576,826
Ensembl chr 1:119,472,767...119,576,730

Esrrb

estrogen related receptor, beta

PMID:9285590

NCBI chr12:86,407,891...86,568,402
Ensembl chr12:86,407,891...86,568,402

Ets2

E26 avian leukemia oncogene 2, 3' domain

PMID:9573048

NCBI chr16:95,503,274...95,522,093
Ensembl chr16:95,502,942...95,522,095

Ext1

exostosin glycosyltransferase 1

PMID:10926768

NCBI chr15:52,931,657...53,209,579
Ensembl chr15:52,927,434...53,209,555

Ezh2

enhancer of zeste 2 polycomb repressive complex 2 subunit

PMID:11390661

NCBI chr 6:47,507,208...47,572,309
Ensembl chr 6:47,507,073...47,572,275

coagulation factor III

PMID:8779717

NCBI chr 3:121,517,186...121,528,701
Ensembl chr 3:121,517,186...121,528,697

ferredoxin reductase

NCBI chr11:115,158,850...115,167,925
Ensembl chr11:115,158,850...115,167,876

Fgfr1

fibroblast growth factor receptor 1

PMID:8001822 PMID:8001823 PMID:12194867

NCBI chr 8:26,008,775...26,065,734
Ensembl chr 8:26,003,670...26,065,734

fibronectin 1

NCBI chr 1:71,624,632...71,692,439
Ensembl chr 1:71,624,679...71,692,359

forkhead box F1

NCBI chr 8:121,811,125...121,814,893
Ensembl chr 8:121,811,125...121,814,883

Furin

furin (paired basic amino acid cleaving enzyme)

PMID:9811571

NCBI chr 7:80,038,942...80,055,188
Ensembl chr 7:80,038,333...80,055,184

frataxin

NCBI chr19:24,236,909...24,257,954
Ensembl chr19:24,238,817...24,257,969

G6pdx

glucose-6-phosphate dehydrogenase X-linked

PMID:12169625

NCBI chr X:73,453,089...73,472,486
Ensembl chr X:73,453,089...73,472,800

Gab1

growth factor receptor bound protein 2-associated protein 1

PMID:12808090

NCBI chr 8:81,491,060...81,607,148
Ensembl chr 8:81,491,067...81,607,148

glial cells missing homolog 1

PMID:10713170

NCBI chr 9:77,959,240...77,972,906
Ensembl chr 9:77,959,206...77,972,906

Gna13

guanine nucleotide binding protein, alpha 13

PMID:8999798

NCBI chr11:109,253,620...109,292,195
Ensembl chr11:109,253,657...109,292,195

Gnpnat1

glucosamine-phosphate N-acetyltransferase 1

PMID:11013212

NCBI chr14:45,613,878...45,626,444
Ensembl chr14:45,613,791...45,642,370

Gpx4

glutathione peroxidase 4

PMID:25922076

NCBI chr10:79,883,000...79,892,273
Ensembl chr10:79,883,000...79,892,273

gene trap ROSA 26, Philippe Soriano

PMID:10477299

NCBI chr 6:113,044,389...113,054,205
Ensembl chr 6:113,044,389...113,054,294

H1f2

H1.2 linker histone, cluster member

PMID:12808097

NCBI chr13:23,922,790...23,923,514
Ensembl chr13:23,922,791...23,924,350

H1f3

H1.3 linker histone, cluster member

PMID:12808097

NCBI chr13:23,739,206...23,739,981
Ensembl chr13:23,737,436...23,744,860

H1f4

H1.4 linker histone, cluster member

PMID:12808097

NCBI chr13:23,805,760...23,806,541
Ensembl chr13:23,804,612...23,806,541

heart and neural crest derivatives expressed 1

PMID:9500551 PMID:23911935

NCBI chr11:57,719,539...57,722,973
Ensembl chr11:57,719,531...57,723,644

host cell factor C1

NCBI chr X:72,986,398...73,011,430
Ensembl chr X:72,986,398...73,009,963

Hgs

HGF-regulated tyrosine kinase substrate

PMID:10364163

NCBI chr11:120,358,431...120,374,810
Ensembl chr11:120,358,461...120,374,805

HNF1 homeobox B

NCBI chr11:83,741,035...83,796,743
Ensembl chr11:83,740,889...83,796,645

Hnf4a

hepatic nuclear factor 4, alpha

PMID:7958910

NCBI chr 2:163,348,731...163,414,827
Ensembl chr 2:163,348,728...163,414,830

Hnrnpu

heterogeneous nuclear ribonucleoprotein U

PMID:16022389

NCBI chr 1:178,148,673...178,170,063
Ensembl chr 1:178,148,673...178,165,362

Hsd17b12

hydroxysteroid (17-beta) dehydrogenase 12

PMID:20130115

NCBI chr 2:93,863,042...93,988,254
Ensembl chr 2:93,863,034...93,988,309

heat shock factor 1

NCBI chr15:76,361,562...76,385,355
Ensembl chr15:76,361,622...76,386,113

Hsp90b1

heat shock protein 90, beta (Grp94), member 1

PMID:17634284

NCBI chr10:86,526,705...86,541,308
Ensembl chr10:86,526,073...86,541,373

Htt

huntingtin

PMID:7550343 PMID:7618107 PMID:7774020

NCBI chr 5:34,919,084...35,069,878
Ensembl chr 5:34,919,084...35,069,878

Incenp

inner centromere protein

PMID:10369859

NCBI chr19:9,849,659...9,876,853
Ensembl chr19:9,849,660...9,876,915

Itga5

integrin alpha 5 (fibronectin receptor alpha)

PMID:7508365

NCBI chr15:103,252,713...103,275,218
Ensembl chr15:103,252,713...103,275,190

integrin alpha V

NCBI chr 2:83,551,625...83,637,261
Ensembl chr 2:83,554,741...83,637,260

integrin beta 8

NCBI chr12:119,121,921...119,202,891
Ensembl chr12:119,121,757...119,202,537

keratin 18

NCBI chr15:101,936,651...101,940,461
Ensembl chr15:101,936,615...101,940,462

keratin 19

NCBI chr11:100,031,636...100,036,752
Ensembl chr11:100,031,636...100,039,491

laminin, alpha 5

NCBI chr 2:179,818,166...179,868,092
Ensembl chr 2:179,818,166...179,867,652

laminin B1

NCBI chr12:31,315,230...31,379,643
Ensembl chr12:31,315,233...31,379,643

LIM domain binding 1

NCBI chr19:46,019,963...46,036,584
Ensembl chr19:46,020,009...46,033,653

Lef1

lymphoid enhancer binding factor 1

NCBI chr 3:130,903,946...131,018,006
Ensembl chr 3:130,904,120...131,018,005

Lrp5

low density lipoprotein receptor-related protein 5

NCBI chr19:3,634,825...3,736,574
Ensembl chr19:3,634,828...3,736,564

Lrp6

low density lipoprotein receptor-related protein 6

NCBI chr 6:134,423,439...134,543,876
Ensembl chr 6:134,423,439...134,543,928

Med1

mediator complex subunit 1

PMID:10747854

NCBI chr11:98,042,980...98,084,121
Ensembl chr11:98,042,980...98,084,119

Mtor

mechanistic target of rapamycin kinase

PMID:15485918

NCBI chr 4:148,533,039...148,642,142
Ensembl chr 4:148,533,068...148,642,140

nibrin

NCBI chr 4:15,955,388...15,992,589
Ensembl chr 4:15,957,925...15,992,589

Nck1

non-catalytic region of tyrosine kinase adaptor protein 1

NCBI chr 9:100,376,047...100,428,187
Ensembl chr 9:100,374,346...100,428,187

Nck2

non-catalytic region of tyrosine kinase adaptor protein 2

NCBI chr 1:43,484,643...43,609,678
Ensembl chr 1:43,483,739...43,609,675

Ndor1

NADPH dependent diflavin oxidoreductase 1

NCBI chr 2:25,134,825...25,145,458
Ensembl chr 2:25,134,833...25,146,034
Ensembl chr 2:25,134,833...25,146,034
Ensembl chr 2:25,134,833...25,146,034

neurofibromin 1

NCBI chr11:79,223,541...79,472,435
Ensembl chr11:79,230,519...79,472,438

neurofibromin 2

NCBI chr11:4,715,845...4,799,544
Ensembl chr11:4,715,845...4,799,536

NK2 homeobox 5

NCBI chr17:27,057,638...27,063,962
Ensembl chr17:27,057,638...27,063,983

Nodal

nodal

PMID:7924997 PMID:8610012

NCBI chr10:61,253,751...61,261,117
Ensembl chr10:61,253,751...61,261,117

Nr6a1

nuclear receptor subfamily 6, group A, member 1

PMID:11134352 PMID:12381721

NCBI chr 2:38,613,381...38,816,473
Ensembl chr 2:38,613,382...38,817,700

Nsd1

nuclear receptor-binding SET-domain protein 1

PMID:12805229

NCBI chr13:55,357,595...55,466,138
Ensembl chr13:55,357,595...55,466,138

Numb

NUMB endocytic adaptor protein

PMID:11412999

NCBI chr12:83,840,808...83,968,713
Ensembl chr12:83,840,808...83,968,708

Ovol2

ovo like zinc finger 2

PMID:17573777

NCBI chr 2:144,147,095...144,174,000
Ensembl chr 2:144,147,095...144,174,066

PAXIP1 associated glutamate rich protein 1A

NCBI chr 7:126,614,223...126,616,524
Ensembl chr 7:126,614,205...126,616,524
Ensembl chr 7:126,614,205...126,616,524

Pdpk1

3-phosphoinositide dependent protein kinase 1

PMID:15116068

NCBI chr17:24,292,654...24,370,957
Ensembl chr17:24,292,654...24,369,898

Pdzrn3

PDZ domain containing RING finger 3

NCBI chr 6:101,126,568...101,354,858
Ensembl chr 6:101,126,570...101,354,858

Pelo

pelota mRNA surveillance and ribosome rescue factor

PMID:12556505

NCBI chr13:115,224,891...115,226,694
Ensembl chr13:115,224,891...115,226,722

Pisd

phosphatidylserine decarboxylase

PMID:16192276

NCBI chr 5:32,893,645...32,943,008
Ensembl chr 5:32,893,645...32,942,990

Pknox1

Pbx/knotted 1 homeobox

PMID:20826531

NCBI chr17:31,783,688...31,826,667
Ensembl chr17:31,783,708...31,826,667

Plcb3

phospholipase C, beta 3

PMID:9883896

NCBI chr19:6,931,081...6,951,738
Ensembl chr19:6,929,693...6,953,838

Plpp3

phospholipid phosphatase 3

PMID:12925589

NCBI chr 4:105,014,544...105,089,964
Ensembl chr 4:105,014,544...105,089,961

phosphomannomutase 2

NCBI chr16:8,455,467...8,475,472
Ensembl chr16:8,455,538...8,480,331

Pnpla6

patatin-like phospholipase domain containing 6

PMID:14749382

NCBI chr 8:3,565,341...3,594,267
Ensembl chr 8:3,565,384...3,594,267

Pofut2

protein O-fucosyltransferase 2

PMID:27297885

NCBI chr10:77,095,056...77,105,420
Ensembl chr10:77,095,052...77,105,409

Porcn

porcupine O-acyltransferase

PMID:23760955

NCBI chr X:8,060,085...8,072,794
Ensembl chr X:8,060,087...8,072,764

Ppard

peroxisome proliferator activator receptor delta

NCBI chr17:28,451,657...28,520,446
Ensembl chr17:28,451,674...28,520,448

Ppp1r8

protein phosphatase 1, regulatory subunit 8

PMID:15199142

NCBI chr 4:132,554,235...132,570,480
Ensembl chr 4:132,554,240...132,570,480

Ppp3r1

protein phosphatase 3, regulatory subunit B, alpha isoform (calcineurin B, type I)

PMID:15030770

NCBI chr11:17,109,298...17,150,380
Ensembl chr11:17,109,263...17,150,375

Procr

protein C receptor, endothelial

PMID:12218060

NCBI chr 2:155,592,159...155,597,398
Ensembl chr 2:155,593,037...155,597,391

Ptk2

PTK2 protein tyrosine kinase 2

PMID:7478517

NCBI chr15:73,076,951...73,297,192
Ensembl chr15:73,076,951...73,295,129

Rab10

RAB10, member RAS oncogene family

PMID:25860786

NCBI chr12:3,297,428...3,359,969
Ensembl chr12:3,297,428...3,359,969

Rasa1

RAS p21 protein activator 1

PMID:7477259

NCBI chr13:85,362,818...85,437,605
Ensembl chr13:85,362,899...85,437,249

Rlim

ring finger protein, LIM domain interacting

PMID:20962847

NCBI chr X:103,000,769...103,024,905
Ensembl chr X:103,000,769...103,024,890

Rock2

Rho-associated coiled-coil containing protein kinase 2

PMID:12832488

NCBI chr12:16,944,808...17,038,275
Ensembl chr12:16,944,896...17,037,824

Rxra

retinoid X receptor alpha

PMID:9356169

NCBI chr 2:27,566,457...27,653,331
Ensembl chr 2:27,566,452...27,652,969

S100a8

S100 calcium binding protein A8 (calgranulin A)

PMID:10438963

NCBI chr 3:90,576,378...90,577,341
Ensembl chr 3:90,576,285...90,577,342

scleraxis

NCBI chr15:76,341,594...76,343,668
Ensembl chr15:76,341,652...76,343,658

Slc34a2

solute carrier family 34 (sodium phosphate), member 2

PMID:19233126

NCBI chr 5:53,206,695...53,229,006
Ensembl chr 5:53,195,423...53,229,006

Smad1

SMAD family member 1

PMID:11566864 PMID:15198985 PMID:16765933

NCBI chr 8:80,065,024...80,126,057
Ensembl chr 8:80,065,024...80,126,147

Smad2

SMAD family member 2

PMID:9655392 PMID:9689088 PMID:12384562

NCBI chr18:76,369,898...76,444,819
Ensembl chr18:76,374,651...76,444,034

SMAD family member 4

NCBI chr18:73,767,861...73,836,862
Ensembl chr18:73,772,080...73,836,851

Smad5

SMAD family member 5

PMID:14502571 PMID:16765933

NCBI chr13:56,850,804...56,890,191
Ensembl chr13:56,850,823...56,890,190

SMAD family member 9

NCBI chr 3:54,662,873...54,709,162
Ensembl chr 3:54,663,003...54,708,678

sorting nexin 1

NCBI chr 9:65,995,409...66,032,168
Ensembl chr 9:65,995,415...66,033,869

sorting nexin 13

NCBI chr12:35,096,101...35,197,479
Ensembl chr12:35,097,185...35,197,478

sorting nexin 2

NCBI chr18:53,309,362...53,353,938
Ensembl chr18:53,309,388...53,353,937

Sos1

SOS Ras/Rac guanine nucleotide exchange factor 1

PMID:10675333

NCBI chr17:80,701,181...80,787,882
Ensembl chr17:80,701,180...80,787,882

Ss18

SS18, nBAF chromatin remodeling complex subunit

PMID:16926188

NCBI chr18:14,758,686...14,817,476
Ensembl chr18:14,757,255...14,815,971

SUZ12 polycomb repressive complex 2 subunit

PMID:15385962 PMID:16687444

NCBI chr11:79,883,932...79,924,949
Ensembl chr11:79,883,932...79,924,949

Tcf7

transcription factor 7, T cell specific

NCBI chr11:52,137,347...52,174,211
Ensembl chr11:52,143,198...52,174,158

Tdgf1

teratocarcinoma-derived growth factor 1

PMID:9876177

NCBI chr 9:110,768,676...110,775,226
Ensembl chr 9:110,768,671...110,775,226

Tead1

TEA domain family member 1

NCBI chr 7:112,278,563...112,505,991
Ensembl chr 7:112,278,525...112,506,014

Tead2

TEA domain family member 2

NCBI chr 7:44,865,216...44,882,892
Ensembl chr 7:44,865,177...44,883,068

Terf1

telomeric repeat binding factor 1

PMID:12944479

NCBI chr 1:15,875,634...15,914,276
Ensembl chr 1:15,875,870...15,914,276

Tfap2a

transcription factor AP-2, alpha

PMID:16672719

NCBI chr13:40,867,278...40,891,715
Ensembl chr13:40,868,778...40,891,852

Tfap2c

transcription factor AP-2, gamma

PMID:12015300 PMID:16672719

NCBI chr 2:172,387,599...172,400,542
Ensembl chr 2:172,391,513...172,400,542

Tgfb1

transforming growth factor, beta 1

PMID:7600998 PMID:17353357

NCBI chr 7:25,386,406...25,404,503
Ensembl chr 7:25,386,427...25,404,502

Tjp1

tight junction protein 1

PMID:18353970

NCBI chr 7:64,945,913...65,177,629
Ensembl chr 7:64,945,913...65,177,529

talin 1

NCBI chr 4:43,531,513...43,562,583
Ensembl chr 4:43,531,519...43,562,691

Tlx2

T cell leukemia, homeobox 2

PMID:9550720

NCBI chr 6:83,045,306...83,047,206
Ensembl chr 6:83,045,305...83,047,274

tripartite motif-containing 28

NCBI chr 7:12,758,079...12,764,959
Ensembl chr 7:12,733,041...12,764,962

Trrap

transformation/transcription domain-associated protein

PMID:11544477

NCBI chr 5:144,704,547...144,796,588
Ensembl chr 5:144,704,542...144,796,588

Ugcg

UDP-glucose ceramide glucosyltransferase

PMID:10430909 PMID:12417405

NCBI chr 4:59,189,452...59,222,833
Ensembl chr 4:59,189,257...59,222,833

Vcam1

vascular cell adhesion molecule 1

PMID:7539357

NCBI chr 3:115,903,669...115,923,337
Ensembl chr 3:115,903,598...115,923,337

Vps26a

VPS26 retromer complex component A

PMID:1879343

NCBI chr10:62,290,622...62,322,584
Ensembl chr10:62,291,014...62,322,584

Wnt3

wingless-type MMTV integration site family, member 3

PMID:10431240

NCBI chr11:103,665,001...103,708,847
Ensembl chr11:103,664,976...103,708,783

Zbtb17

zinc finger and BTB domain containing 17

PMID:14560010

NCBI chr 4:141,171,984...141,195,248
Ensembl chr 4:141,171,965...141,195,241

Zfp568

zinc finger protein 568

PMID:21094155 PMID:22110054

NCBI chr 7:29,683,380...29,727,707
Ensembl chr 7:29,683,380...29,727,707

Zfx

zinc finger protein X-linked

PMID:17448993

NCBI chr X:93,118,237...93,194,250
Ensembl chr X:93,118,237...93,167,308

Zic3

zinc finger protein of the cerebellum 3

PMID:16397896

NCBI chr X:57,075,988...57,081,990
Ensembl chr X:57,068,060...57,087,096

abnormal allantois morphology

Symbol

Object Name

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Alg10b

asparagine-linked glycosylation 10B (alpha-1,2-glucosyltransferase)

NCBI chr15:90,108,514...90,114,757
Ensembl chr15:90,108,514...90,117,674

Alg6

asparagine-linked glycosylation 6 (alpha-1,3,-glucosyltransferase)

NCBI chr 4:99,603,833...99,651,697
Ensembl chr 4:99,603,901...99,651,697

Arhgef7

Rho guanine nucleotide exchange factor (GEF7)

PMID:31402636

NCBI chr 8:11,778,053...11,885,219
Ensembl chr 8:11,777,721...11,885,219

Axin1

axin 1

PMID:8536979 PMID:18113441

NCBI chr17:26,350,208...26,414,785
Ensembl chr17:26,357,662...26,414,785

Bmp4

bone morphogenetic protein 4

PMID:16624858

NCBI chr14:46,620,982...46,628,126
Ensembl chr14:46,620,977...46,628,126

Bmp8b

bone morphogenetic protein 8b

PMID:10894154

NCBI chr 4:122,998,101...123,019,887
Ensembl chr 4:122,998,958...123,025,892

Brca1

breast cancer 1, early onset

PMID:9207798

NCBI chr11:101,379,587...101,442,808
Ensembl chr11:101,379,590...101,442,781

cyclin F

NCBI chr17:24,442,204...24,470,383
Ensembl chr17:24,441,172...24,470,458

Cdx2

caudal type homeobox 2

NCBI chr 5:147,237,710...147,244,059
Ensembl chr 5:147,237,615...147,244,080

Cdx4

caudal type homeobox 4

NCBI chr X:102,365,004...102,373,830
Ensembl chr X:102,365,004...102,374,198

Chmp5

charged multivesicular body protein 5

PMID:16567502

NCBI chr 4:40,948,553...40,965,302
Ensembl chr 4:40,948,407...40,965,303

Commd1

COMM domain containing 1

PMID:17371845

NCBI chr11:22,849,728...22,934,539
Ensembl chr11:22,846,136...22,932,382

Csk

c-src tyrosine kinase

PMID:7685657

NCBI chr 9:57,533,929...57,560,914
Ensembl chr 9:57,533,929...57,560,914

Ctbp1

C-terminal binding protein 1

PMID:12101226

NCBI chr 5:33,405,067...33,432,467
Ensembl chr 5:33,405,067...33,432,338

Ctbp2

C-terminal binding protein 2

PMID:12101226

NCBI chr 7:132,588,727...132,725,908
Ensembl chr 7:132,589,292...132,726,083

Cubn

cubilin (intrinsic factor-cobalamin receptor)

PMID:16787536

NCBI chr 2:13,281,149...13,496,687
Ensembl chr 2:13,281,149...13,496,624

Dbn1

drebrin 1

NCBI chr13:55,621,241...55,635,959
Ensembl chr13:55,621,242...55,635,924

Ddx3x

DEAD box helicase 3, X-linked

PMID:27179789

NCBI chr X:13,147,261...13,160,222
Ensembl chr X:13,147,209...13,160,291

Edil3

EGF-like repeats and discoidin I-like domains 3

PMID:15215210 PMID:27179789

NCBI chr13:88,969,591...89,471,344
Ensembl chr13:88,969,591...89,471,342

Enpp2

ectonucleotide pyrophosphatase/phosphodiesterase 2

PMID:20079728

NCBI chr15:54,702,297...54,816,284
Ensembl chr15:54,702,297...54,816,288

Ets2 repressor factor

NCBI chr 7:24,941,985...24,950,529
Ensembl chr 7:24,941,986...24,950,186

Faf2

Fas associated factor family member 2

NCBI chr13:54,769,597...54,811,876
Ensembl chr13:54,769,597...54,811,876

Fgf8

fibroblast growth factor 8

PMID:10421635

NCBI chr19:45,724,930...45,731,506
Ensembl chr19:45,725,237...45,731,354

Folr1

folate receptor 1 (adult)

NCBI chr 7:101,507,538...101,519,995
Ensembl chr 7:101,507,538...101,519,995

forkhead box F1

NCBI chr 8:121,811,125...121,814,893
Ensembl chr 8:121,811,125...121,814,883

Furin

furin (paired basic amino acid cleaving enzyme)

PMID:9811571

NCBI chr 7:80,038,942...80,055,188
Ensembl chr 7:80,038,333...80,055,184

gap junction protein, beta 3

NCBI chr 4:127,219,028...127,224,629
Ensembl chr 4:127,219,028...127,224,637

Hdac1

histone deacetylase 1

PMID:12032080

NCBI chr 4:129,409,897...129,436,439
Ensembl chr 4:129,409,897...129,436,506

Hira

histone cell cycle regulator

PMID:11884616

NCBI chr16:18,695,500...18,789,059
Ensembl chr16:18,695,787...18,789,059

Hus1

HUS1 checkpoint clamp component

PMID:10921903

NCBI chr11:8,943,137...8,961,240
Ensembl chr11:8,943,137...8,961,191

Ift172

intraflagellar transport 172

NCBI chr 5:31,410,623...31,448,458
Ensembl chr 5:31,410,621...31,448,460

Ipo9

importin 9

NCBI chr 1:135,310,050...135,358,260
Ensembl chr 1:135,310,050...135,358,237

integrin alpha 4

NCBI chr 2:79,084,767...79,163,458
Ensembl chr 2:79,085,770...79,163,467

Kdr

kinase insert domain protein receptor

PMID:16514057

NCBI chr 5:76,093,487...76,139,885
Ensembl chr 5:76,093,487...76,139,118

Krit1

KRIT1, ankyrin repeat containing

NCBI chr 5:3,853,156...3,894,515
Ensembl chr 5:3,853,184...3,895,564

keratin 19

NCBI chr11:100,031,636...100,036,752
Ensembl chr11:100,031,636...100,039,491

keratin 8

NCBI chr15:101,905,146...101,912,777
Ensembl chr15:101,905,133...101,912,917

LIM domain binding 1

NCBI chr19:46,019,963...46,036,584
Ensembl chr19:46,020,009...46,033,653

Lef1

lymphoid enhancer binding factor 1

NCBI chr 3:130,903,946...131,018,006
Ensembl chr 3:130,904,120...131,018,005

Lhx1

LIM homeobox protein 1

PMID:7700351

NCBI chr11:84,408,801...84,416,360
Ensembl chr11:84,409,110...84,416,361

LIM domain only 2

NCBI chr 2:103,788,340...103,812,223
Ensembl chr 2:103,788,331...103,812,223

Meox2

mesenchyme homeobox 2

PMID:16801545

NCBI chr12:37,158,539...37,229,533
Ensembl chr12:37,158,539...37,229,533

Mtap

methylthioadenosine phosphorylase

NCBI chr 4:89,055,607...89,099,327
Ensembl chr 4:89,055,359...89,099,318

Nck1

non-catalytic region of tyrosine kinase adaptor protein 1

NCBI chr 9:100,376,047...100,428,187
Ensembl chr 9:100,374,346...100,428,187

Nck2

non-catalytic region of tyrosine kinase adaptor protein 2

NCBI chr 1:43,484,643...43,609,678
Ensembl chr 1:43,483,739...43,609,675

Nckap1

NCK-associated protein 1

PMID:16831833

NCBI chr 2:80,330,856...80,411,526
Ensembl chr 2:80,330,856...80,411,724

Nr6a1

nuclear receptor subfamily 6, group A, member 1

PMID:11134352 PMID:12381721

NCBI chr 2:38,613,381...38,816,473
Ensembl chr 2:38,613,382...38,817,700

Otx2

orthodenticle homeobox 2

PMID:8565836

NCBI chr14:48,894,238...48,905,101
Ensembl chr14:48,895,134...48,911,276

Paxip1

PAX interacting (with transcription-activation domain) protein 1

PMID:12588986 PMID:18710940

NCBI chr 5:27,945,078...27,999,326
Ensembl chr 5:27,945,078...27,996,689

Pdpk1

3-phosphoinositide dependent protein kinase 1

PMID:12110585

NCBI chr17:24,292,654...24,370,957
Ensembl chr17:24,292,654...24,369,898

Pigq

phosphatidylinositol glycan anchor biosynthesis, class Q

NCBI chr17:26,145,394...26,161,855
Ensembl chr17:26,145,395...26,163,910

Plpp3

phospholipid phosphatase 3

PMID:12925589 PMID:17610274 PMID:19123136

NCBI chr 4:105,014,544...105,089,964
Ensembl chr 4:105,014,544...105,089,961

Porcn

porcupine O-acyltransferase

PMID:23760955

NCBI chr X:8,060,085...8,072,794
Ensembl chr X:8,060,087...8,072,764

phosphatase and tensin homolog

PMID:9799734

NCBI chr19:32,734,977...32,803,560
Ensembl chr19:32,734,897...32,803,560

Ptk2

PTK2 protein tyrosine kinase 2

PMID:7478517

NCBI chr15:73,076,951...73,297,192
Ensembl chr15:73,076,951...73,295,129

Ptpn11

protein tyrosine phosphatase, non-receptor type 11

PMID:9171349

NCBI chr 5:121,268,596...121,329,460
Ensembl chr 5:121,268,596...121,329,460

Ptprb

protein tyrosine phosphatase, receptor type, B

PMID:16514057

NCBI chr10:116,111,407...116,225,443
Ensembl chr10:116,111,428...116,225,440

paxillin

NCBI chr 5:115,630,153...115,694,046
Ensembl chr 5:115,644,735...115,694,046

Rasip1

Ras interacting protein 1

PMID:21396893

NCBI chr 7:45,276,961...45,288,516
Ensembl chr 7:45,276,912...45,288,517

Rnaseh2b

ribonuclease H2, subunit B

PMID:22579044

NCBI chr14:62,569,517...62,610,445
Ensembl chr14:62,530,038...62,610,441

Slc25a3

solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3

NCBI chr10:90,952,436...90,959,902
Ensembl chr10:90,952,436...90,959,921

Smad1

SMAD family member 1

PMID:11566864 PMID:11784053 PMID:15198985 PMID:16765933

NCBI chr 8:80,065,024...80,126,057
Ensembl chr 8:80,065,024...80,126,147

SMAD family member 4

NCBI chr18:73,767,861...73,836,862
Ensembl chr18:73,772,080...73,836,851

Smad5

SMAD family member 5

PMID:10079226 PMID:14502571 PMID:16765933

NCBI chr13:56,850,804...56,890,191
Ensembl chr13:56,850,823...56,890,190

Snai1

snail family zinc finger 1

PMID:16801545

NCBI chr 2:167,380,115...167,384,734
Ensembl chr 2:167,380,115...167,384,734

Spring1

SREBF pathway regulator in golgi 1

PMID:32111832

NCBI chr 5:118,383,292...118,401,179
Ensembl chr 5:118,383,292...118,404,158

Supt20

SPT20 SAGA complex component

PMID:16751104

NCBI chr 3:54,600,181...54,636,184
Ensembl chr 3:54,600,228...54,636,187

brachyury, T-box transcription factor T

PMID:5906493

NCBI chr17:8,653,255...8,661,328
Ensembl chr17:8,653,255...8,661,328

T-box 4

NCBI chr11:85,777,193...85,806,923
Ensembl chr11:85,777,248...85,806,923

Tcf7

transcription factor 7, T cell specific

NCBI chr11:52,137,347...52,174,211
Ensembl chr11:52,143,198...52,174,158

Tead1

TEA domain family member 1

NCBI chr 7:112,278,563...112,505,991
Ensembl chr 7:112,278,525...112,506,014

Tead2

TEA domain family member 2

NCBI chr 7:44,865,216...44,882,892
Ensembl chr 7:44,865,177...44,883,068

Tmed2

transmembrane p24 trafficking protein 2

PMID:20178780

NCBI chr 5:124,677,969...124,688,569
Ensembl chr 5:124,678,758...124,688,569

transformer 2 beta

NCBI chr16:22,063,302...22,084,755
Ensembl chr16:22,063,299...22,084,755

Trp53

transformation related protein 53

PMID:9207798

NCBI chr11:69,471,174...69,482,699
Ensembl chr11:69,471,185...69,482,699

X (inactive)-specific transcript, opposite strand

NCBI chr X:102,475,123...102,528,563
Ensembl chr X:102,475,123...102,528,563

Ubr5

ubiquitin protein ligase E3 component n-recognin 5

PMID:15282321

NCBI chr15:37,966,421...38,084,103
Ensembl chr15:37,967,572...38,079,098

Uggt1

UDP-glucose glycoprotein glucosyltransferase 1

NCBI chr 1:36,179,109...36,283,407
Ensembl chr 1:36,179,108...36,283,801

Uhrf1

ubiquitin-like, containing PHD and RING finger domains, 1

PMID:17994007

NCBI chr17:56,610,337...56,630,486
Ensembl chr17:56,610,321...56,630,486

Vcam1

vascular cell adhesion molecule 1

PMID:7587631

NCBI chr 3:115,903,669...115,923,337
Ensembl chr 3:115,903,598...115,923,337

Wasl

WASP like actin nucleation promoting factor

PMID:11559594

NCBI chr 6:24,613,809...24,665,185
Ensembl chr 6:24,613,804...24,665,008

Yap1

yes-associated protein 1

NCBI chr 9:7,932,000...8,004,890
Ensembl chr 9:7,932,000...8,004,597

abnormal amnion morphology

Symbol

Object Name

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Becn1

beclin 1, autophagy related

PMID:14657337

NCBI chr11:101,179,084...101,193,112
Ensembl chr11:101,176,778...101,193,112

Bmp1

bone morphogenetic protein 1

PMID:8951074

NCBI chr14:70,711,995...70,758,280
Ensembl chr14:70,711,998...70,757,674

Brca2

breast cancer 2, early onset

PMID:9171368

NCBI chr 5:150,445,759...150,493,612
Ensembl chr 5:150,446,095...150,493,794

Fgf8

fibroblast growth factor 8

PMID:10421635 PMID:17507393

NCBI chr19:45,724,930...45,731,506
Ensembl chr19:45,725,237...45,731,354

Fn1

fibronectin 1

PMID:8306876 PMID:8906418

NCBI chr 1:71,624,632...71,692,439
Ensembl chr 1:71,624,679...71,692,359

forkhead box F1

NCBI chr 8:121,811,125...121,814,893
Ensembl chr 8:121,811,125...121,814,883

heart and neural crest derivatives expressed 1

PMID:9500550

NCBI chr11:57,719,539...57,722,973
Ensembl chr11:57,719,531...57,723,644

Lrp5

low density lipoprotein receptor-related protein 5

NCBI chr19:3,634,825...3,736,574
Ensembl chr19:3,634,828...3,736,564

Lrp6

low density lipoprotein receptor-related protein 6

NCBI chr 6:134,423,439...134,543,876
Ensembl chr 6:134,423,439...134,543,928

Mecom

MDS1 and EVI1 complex locus

PMID:9256345

NCBI chr 3:30,005,445...30,563,937
Ensembl chr 3:30,005,445...30,602,157

Mixl1

Mix1 homeobox-like 1 (Xenopus laevis)

PMID:12117810

NCBI chr 1:180,520,608...180,524,599
Ensembl chr 1:180,520,608...180,524,599

Otx2

orthodenticle homeobox 2

PMID:7588062

NCBI chr14:48,894,238...48,905,101
Ensembl chr14:48,895,134...48,911,276

PAXIP1 associated glutamate rich protein 1A

NCBI chr 7:126,614,223...126,616,524
Ensembl chr 7:126,614,205...126,616,524
Ensembl chr 7:126,614,205...126,616,524

Ptk2

PTK2 protein tyrosine kinase 2

PMID:7478517 PMID:15967814

NCBI chr15:73,076,951...73,297,192
Ensembl chr15:73,076,951...73,295,129

paxillin

NCBI chr 5:115,630,153...115,694,046
Ensembl chr 5:115,644,735...115,694,046

Sec23a

SEC23 homolog A, COPII coat complex component

PMID:26494538

NCBI chr12:59,005,170...59,058,803
Ensembl chr12:59,005,169...59,058,803

Sephs1

selenophosphate synthetase 1

PMID:27208177

NCBI chr 2:4,886,375...4,915,368
Ensembl chr 2:4,886,375...4,915,368

Smad5

SMAD family member 5

PMID:10079226 PMID:14502571

NCBI chr13:56,850,804...56,890,191
Ensembl chr13:56,850,823...56,890,190

SUZ12 polycomb repressive complex 2 subunit

NCBI chr11:79,883,932...79,924,949
Ensembl chr11:79,883,932...79,924,949

Tdgf1

teratocarcinoma-derived growth factor 1

PMID:9876177

NCBI chr 9:110,768,676...110,775,226
Ensembl chr 9:110,768,671...110,775,226

Tlx2

T cell leukemia, homeobox 2

PMID:9550720

NCBI chr 6:83,045,306...83,047,206
Ensembl chr 6:83,045,305...83,047,274

abnormal amniotic cavity morphology

Symbol

Object Name

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Afdn

afadin, adherens junction formation factor

PMID:10477764

NCBI chr17:13,980,735...14,126,059
Ensembl chr17:13,980,801...14,126,412

axin 1

NCBI chr17:26,350,208...26,414,785
Ensembl chr17:26,357,662...26,414,785

Bmp4

bone morphogenetic protein 4

PMID:12361961

NCBI chr14:46,620,982...46,628,126
Ensembl chr14:46,620,977...46,628,126

Cep20

centrosomal protein 20

PMID:33686659

NCBI chr16:14,117,105...14,136,093
Ensembl chr16:14,117,108...14,135,269

Cer1

cerberus 1, DAN family BMP antagonist

PMID:12431380

NCBI chr 4:82,799,988...82,803,388
Ensembl chr 4:82,799,988...82,803,385

Ddx11

DEAD/H box helicase 11

PMID:22678773

NCBI chr17:66,430,508...66,459,169
Ensembl chr17:66,430,515...66,459,169

eomesodermin

NCBI chr 9:118,307,254...118,315,200
Ensembl chr 9:118,307,280...118,315,200

huntingtin

NCBI chr 5:34,919,084...35,069,878
Ensembl chr 5:34,919,084...35,069,878

Lefty1

left right determination factor 1

PMID:12431380

NCBI chr 1:180,762,587...180,765,966
Ensembl chr 1:180,762,587...180,765,965

nodal

NCBI chr10:61,253,751...61,261,117
Ensembl chr10:61,253,751...61,261,117

Nr5a2

nuclear receptor subfamily 5, group A, member 2

PMID:15014077

NCBI chr 1:136,770,300...136,888,186
Ensembl chr 1:136,770,309...136,888,186

PAXIP1 associated glutamate rich protein 1A

NCBI chr 7:126,614,223...126,616,524
Ensembl chr 7:126,614,205...126,616,524
Ensembl chr 7:126,614,205...126,616,524

Spring1

SREBF pathway regulator in golgi 1

PMID:32111832

NCBI chr 5:118,383,292...118,401,179
Ensembl chr 5:118,383,292...118,404,158

SUZ12 polycomb repressive complex 2 subunit

NCBI chr11:79,883,932...79,924,949
Ensembl chr11:79,883,932...79,924,949

talin 1

NCBI chr 4:43,531,513...43,562,583
Ensembl chr 4:43,531,519...43,562,691

Washc1

WASH complex subunit 1

PMID:23974797

NCBI chr17:66,418,524...66,427,498
Ensembl chr17:66,418,540...66,427,498

abnormal chorion morphology

Symbol

Object Name

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

abl interactor 1

NCBI chr 2:22,830,085...22,930,275
Ensembl chr 2:22,830,085...22,930,253

Arhgef7

Rho guanine nucleotide exchange factor (GEF7)

PMID:31402636

NCBI chr 8:11,778,053...11,885,219
Ensembl chr 8:11,777,721...11,885,219

Armh3

armadillo-like helical domain containing 3

NCBI chr19:45,805,799...45,987,071
Ensembl chr19:45,805,803...45,986,927

Ascl2

achaete-scute family bHLH transcription factor 2

PMID:7773285 PMID:8090202

NCBI chr 7:142,520,559...142,523,001
Ensembl chr 7:142,520,566...142,523,001

Bap1

Brca1 associated protein 1

NCBI chr14:30,973,358...30,981,887
Ensembl chr14:30,973,407...30,981,901

Bmp2

bone morphogenetic protein 2

PMID:8898212

NCBI chr 2:133,394,079...133,404,816
Ensembl chr 2:133,394,079...133,404,805

Bmp4

bone morphogenetic protein 4

PMID:16624858

NCBI chr14:46,620,982...46,628,126
Ensembl chr14:46,620,977...46,628,126

Bptf

bromodomain PHD finger transcription factor

PMID:18794365

NCBI chr11:106,923,907...107,022,982
Ensembl chr11:106,923,907...107,022,953

Cnot4

CCR4-NOT transcription complex, subunit 4

NCBI chr 6:34,999,000...35,110,692
Ensembl chr 6:34,999,000...35,110,659

coenzyme Q4

NCBI chr 2:29,677,505...29,687,947
Ensembl chr 2:29,677,505...29,687,947

Crb2

crumbs family member 2

NCBI chr 2:37,666,238...37,689,115
Ensembl chr 2:37,666,261...37,689,115

Crls1

cardiolipin synthase 1

NCBI chr 2:132,688,557...132,708,706
Ensembl chr 2:132,688,586...132,708,705

DEAD box helicase 42

NCBI chr11:106,107,715...106,139,966
Ensembl chr11:106,107,752...106,139,965

Dnmt3l

DNA (cytosine-5-)-methyltransferase 3-like

PMID:11719692 PMID:11934864

NCBI chr10:77,878,121...77,899,456
Ensembl chr10:77,877,781...77,899,456

Dpm1

dolichol-phosphate (beta-D) mannosyltransferase 1

NCBI chr 2:168,050,968...168,072,299
Ensembl chr 2:168,050,968...168,072,511

Ets2 repressor factor

NCBI chr 7:24,941,985...24,950,529
Ensembl chr 7:24,941,986...24,950,186

Esrrb

estrogen related receptor, beta

PMID:9285590

NCBI chr12:86,407,891...86,568,402
Ensembl chr12:86,407,891...86,568,402

Fgf8

fibroblast growth factor 8

PMID:10421635

NCBI chr19:45,724,930...45,731,506
Ensembl chr19:45,725,237...45,731,354

Fgfr1

fibroblast growth factor receptor 1

PMID:8001822

NCBI chr 8:26,008,775...26,065,734
Ensembl chr 8:26,003,670...26,065,734

G6pdx

glucose-6-phosphate dehydrogenase X-linked

PMID:12169625

NCBI chr X:73,453,089...73,472,486
Ensembl chr X:73,453,089...73,472,800

Gtpbp3

GTP binding protein 3

NCBI chr 8:71,938,788...71,952,268
Ensembl chr 8:71,940,747...71,952,227

H13

histocompatibility 13

NCBI chr 2:152,511,292...152,550,588
Ensembl chr 2:152,511,381...152,550,590

heart and neural crest derivatives expressed 1

PMID:9500550

NCBI chr11:57,719,539...57,722,973
Ensembl chr11:57,719,531...57,723,644

Med23

mediator complex subunit 23

NCBI chr10:24,745,884...24,789,427
Ensembl chr10:24,745,884...24,789,579

Nr6a1

nuclear receptor subfamily 6, group A, member 1

PMID:11134352 PMID:12381721

NCBI chr 2:38,613,381...38,816,473
Ensembl chr 2:38,613,382...38,817,700

Nrbp1

nuclear receptor binding protein 1

NCBI chr 5:31,398,227...31,408,910
Ensembl chr 5:31,398,208...31,408,910

PAXIP1 associated glutamate rich protein 1A

NCBI chr 7:126,614,223...126,616,524
Ensembl chr 7:126,614,205...126,616,524
Ensembl chr 7:126,614,205...126,616,524

Pitrm1

pitrilysin metallepetidase 1

NCBI chr13:6,598,158...6,630,194
Ensembl chr13:6,598,185...6,630,551

Pnpla6

patatin-like phospholipase domain containing 6

PMID:14749382

NCBI chr 8:3,565,341...3,594,267
Ensembl chr 8:3,565,384...3,594,267

Rab21

RAB21, member RAS oncogene family

NCBI chr10:115,125,767...115,151,540
Ensembl chr10:115,122,989...115,151,499

Setd5

SET domain containing 5

NCBI chr 6:113,054,326...113,130,393
Ensembl chr 6:113,054,326...113,130,396

SMAD family member 1

NCBI chr 8:80,065,024...80,126,057
Ensembl chr 8:80,065,024...80,126,147

SMAD family member 2

NCBI chr18:76,369,898...76,444,819
Ensembl chr18:76,374,651...76,444,034

Stk3

serine/threonine kinase 3

NCBI chr15:34,875,645...35,155,990
Ensembl chr15:34,875,642...35,179,067

Stk4

serine/threonine kinase 4

NCBI chr 2:163,916,033...163,997,444
Ensembl chr 2:163,912,242...163,997,444

Supt3

SPT3, SAGA and STAGA complex component

NCBI chr17:45,088,005...45,430,181
Ensembl chr17:45,088,039...45,430,177

SUZ12 polycomb repressive complex 2 subunit

NCBI chr11:79,883,932...79,924,949
Ensembl chr11:79,883,932...79,924,949

Tdgf1

teratocarcinoma-derived growth factor 1

PMID:9876177

NCBI chr 9:110,768,676...110,775,226
Ensembl chr 9:110,768,671...110,775,226

Timmdc1

translocase of inner mitochondrial membrane domain containing 1

NCBI chr16:38,318,205...38,343,075
Ensembl chr16:38,318,709...38,343,025

X (inactive)-specific transcript, opposite strand

NCBI chr X:102,475,123...102,528,563
Ensembl chr X:102,475,123...102,528,563

Wnt7b

wingless-type MMTV integration site family, member 7B

PMID:11543617

NCBI chr15:85,419,638...85,466,022
Ensembl chr15:85,419,638...85,466,674

Wrap53

WD repeat containing, antisense to Trp53

NCBI chr11:69,452,580...69,471,076
Ensembl chr11:69,452,584...69,471,081

Zfp568

zinc finger protein 568

PMID:21094155

NCBI chr 7:29,683,380...29,727,707
Ensembl chr 7:29,683,380...29,727,707

abnormal chorionic plate morphology

Symbol

Object Name

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Arnt

aryl hydrocarbon receptor nuclear translocator

PMID:11124810

NCBI chr 3:95,341,674...95,404,551
Ensembl chr 3:95,341,699...95,404,551

Bcas3

BCAS3 microtubule associated cell migration factor

PMID:29618843

NCBI chr11:85,243,611...85,716,884
Ensembl chr11:85,243,993...85,716,884

Bcl9l

B cell CLL/lymphoma 9-like

PMID:22109522

NCBI chr 9:44,394,122...44,423,203
Ensembl chr 9:44,394,122...44,423,193

Ccn1

cellular communication network factor 1

PMID:12446788

NCBI chr 3:145,352,726...145,355,740
Ensembl chr 3:145,352,731...145,355,736

Commd1

COMM domain containing 1

PMID:17371845

NCBI chr11:22,849,728...22,934,539
Ensembl chr11:22,846,136...22,932,382

Elavl1

ELAV (embryonic lethal, abnormal vision)-like 1 (Hu antigen R)

PMID:19307312

NCBI chr 8:4,334,781...4,375,104
Ensembl chr 8:4,335,382...4,375,413

Enpp2

ectonucleotide pyrophosphatase/phosphodiesterase 2

PMID:20079728

NCBI chr15:54,702,297...54,816,284
Ensembl chr15:54,702,297...54,816,288

fos-like antigen 1

NCBI chr19:5,497,726...5,505,966
Ensembl chr19:5,497,575...5,505,974

glial cells missing homolog 1

PMID:10888880

NCBI chr 9:77,959,240...77,972,906
Ensembl chr 9:77,959,206...77,972,906

gap junction protein, beta 3

NCBI chr 4:127,219,028...127,224,629
Ensembl chr 4:127,219,028...127,224,637

notch 2

NCBI chr 3:97,920,854...98,057,683
Ensembl chr 3:97,920,843...98,057,677

Pnpla6

patatin-like phospholipase domain containing 6

PMID:14749382

NCBI chr 8:3,565,341...3,594,267
Ensembl chr 8:3,565,384...3,594,267

peroxisome proliferator activated receptor gamma

PMID:10549290

NCBI chr 6:115,337,840...115,467,365
Ensembl chr 6:115,337,912...115,467,360

Spint1

serine protease inhibitor, Kunitz type 1

PMID:15964823

NCBI chr 2:119,067,841...119,080,016
Ensembl chr 2:119,067,843...119,080,008

Ss18

SS18, nBAF chromatin remodeling complex subunit

PMID:16926188

NCBI chr18:14,758,686...14,817,476
Ensembl chr18:14,757,255...14,815,971

abnormal decidua basalis morphology

Symbol

Object Name

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

CD247 antigen

NCBI chr 1:165,607,514...165,698,722
Ensembl chr 1:165,616,250...165,704,846

Emp2

epithelial membrane protein 2

PMID:28295343

NCBI chr16:10,099,613...10,131,832
Ensembl chr16:10,099,613...10,131,832

Fcer1g

Fc receptor, IgE, high affinity I, gamma polypeptide

NCBI chr 1:171,057,141...171,061,918
Ensembl chr 1:171,057,141...171,061,934

Hcst

hematopoietic cell signal transducer

NCBI chr 7:30,117,137...30,119,279
Ensembl chr 7:30,117,137...30,119,279

Il11ra1

interleukin 11 receptor, alpha chain 1

PMID:9500603

NCBI chr 4:41,760,443...41,769,473
Ensembl chr 4:41,699,989...41,769,474

Il2rg

interleukin 2 receptor, gamma chain

PMID:12069389

NCBI chr X:100,307,991...100,311,861
Ensembl chr X:100,307,984...100,311,861

Tyrobp

TYRO protein tyrosine kinase binding protein

NCBI chr 7:30,113,207...30,117,007
Ensembl chr 7:30,113,185...30,117,010

abnormal decidua capsularis morphology

Symbol

Object Name

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Il11ra1

interleukin 11 receptor, alpha chain 1

PMID:9500603 PMID:9679067

NCBI chr 4:41,760,443...41,769,473
Ensembl chr 4:41,699,989...41,769,474

abnormal ectoplacental cavity morphology

Symbol

Object Name

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

SUZ12 polycomb repressive complex 2 subunit

NCBI chr11:79,883,932...79,924,949
Ensembl chr11:79,883,932...79,924,949

tripartite motif-containing 28

NCBI chr 7:12,758,079...12,764,959
Ensembl chr 7:12,733,041...12,764,962

X (inactive)-specific transcript, opposite strand

NCBI chr X:102,475,123...102,528,563
Ensembl chr X:102,475,123...102,528,563

Washc1

WASH complex subunit 1

PMID:23974797

NCBI chr17:66,418,524...66,427,498
Ensembl chr17:66,418,540...66,427,498

Wasl

WASP like actin nucleation promoting factor

PMID:11559594

NCBI chr 6:24,613,809...24,665,185
Ensembl chr 6:24,613,804...24,665,008

abnormal ectoplacental cone morphology

Symbol

Object Name

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Abcb7

ATP-binding cassette, sub-family B (MDR/TAP), member 7

PMID:16467350

NCBI chr X:103,324,171...103,457,452
Ensembl chr X:103,324,263...103,457,462

Atad3a

ATPase family, AAA domain containing 3A

PMID:23372768

NCBI chr 4:155,825,097...155,845,579
Ensembl chr 4:155,825,098...155,845,550

Atrx

ATRX, chromatin remodeler

PMID:16628246

NCBI chr X:104,841,221...104,972,978
Ensembl chr X:104,841,221...104,973,009

aurora kinase B

NCBI chr11:68,936,450...68,942,490
Ensembl chr11:68,936,473...68,942,490

Cr1l

complement component (3b/4b) receptor 1-like

PMID:10642554

NCBI chr 1:194,781,019...194,813,878
Ensembl chr 1:194,779,690...194,813,894

Cxxc1

CXXC finger 1 (PHD domain)

PMID:11604496

NCBI chr18:74,349,283...74,354,564
Ensembl chr18:74,349,195...74,354,567

Dhx9

DEAH (Asp-Glu-Ala-His) box polypeptide 9

PMID:9811865

NCBI chr 1:153,331,502...153,363,464
Ensembl chr 1:153,331,504...153,363,406

Dnmt3l

DNA (cytosine-5-)-methyltransferase 3-like

PMID:11719692

NCBI chr10:77,878,121...77,899,456
Ensembl chr10:77,877,781...77,899,456

Ets2 repressor factor

NCBI chr 7:24,941,985...24,950,529
Ensembl chr 7:24,941,986...24,950,186

Ets2

E26 avian leukemia oncogene 2, 3' domain

PMID:9573048

NCBI chr16:95,503,274...95,522,093
Ensembl chr16:95,502,942...95,522,095

Fbxl5

F-box and leucine-rich repeat protein 5

PMID:21907140

NCBI chr 5:43,901,958...43,939,529
Ensembl chr 5:43,901,957...43,978,980

gene trap ROSA 26, Philippe Soriano

PMID:10477299

NCBI chr 6:113,044,389...113,054,205
Ensembl chr 6:113,044,389...113,054,294

laminin, alpha 1

NCBI chr17:68,004,129...68,129,640
Ensembl chr17:68,004,254...68,129,642

N6amt1

N-6 adenine-specific DNA methyltransferase 1 (putative)

PMID:20606008

NCBI chr16:87,151,073...87,165,537
Ensembl chr16:87,151,073...87,165,630

Prl4a1

prolactin family 4, subfamily a, member 1

PMID:15545614

NCBI chr13:28,200,195...28,207,531
Ensembl chr13:28,200,195...28,207,542

Ptbp1

polypyrimidine tract binding protein 1

PMID:21423341

NCBI chr10:79,690,266...79,700,269
Ensembl chr10:79,690,261...79,700,605

Rangap1

RAN GTPase activating protein 1

PMID:8314081

NCBI chr15:81,588,449...81,614,120
Ensembl chr15:81,588,449...81,629,731

scleraxis

NCBI chr15:76,341,594...76,343,668
Ensembl chr15:76,341,652...76,343,658

SMAD family member 2

NCBI chr18:76,369,898...76,444,819
Ensembl chr18:76,374,651...76,444,034

Terf1

telomeric repeat binding factor 1

PMID:12944479

NCBI chr 1:15,875,634...15,914,276
Ensembl chr 1:15,875,870...15,914,276

X (inactive)-specific transcript, opposite strand

NCBI chr X:102,475,123...102,528,563
Ensembl chr X:102,475,123...102,528,563

abnormal extraembryonic coelom morphology

Symbol

Object Name

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Afdn

afadin, adherens junction formation factor

PMID:10477764

NCBI chr17:13,980,735...14,126,059
Ensembl chr17:13,980,801...14,126,412

Ctdnep1

CTD nuclear envelope phosphatase 1

PMID:23469192

NCBI chr11:69,871,994...69,881,427
Ensembl chr11:69,871,982...69,881,427

Dad1

defender against cell death 1

PMID:10720432

NCBI chr14:54,472,942...54,491,386
Ensembl chr14:54,472,936...54,491,561

Gata4

GATA binding protein 4

PMID:9136933

NCBI chr14:63,436,363...63,509,161
Ensembl chr14:63,436,371...63,509,141

Kat2a

K(lysine) acetyltransferase 2A

PMID:11017084

NCBI chr11:100,595,572...100,604,427
Ensembl chr11:100,595,572...100,603,291

PAXIP1 associated glutamate rich protein 1A

NCBI chr 7:126,614,223...126,616,524
Ensembl chr 7:126,614,205...126,616,524
Ensembl chr 7:126,614,205...126,616,524

Rangap1

RAN GTPase activating protein 1

PMID:8314081

NCBI chr15:81,588,449...81,614,120
Ensembl chr15:81,588,449...81,629,731

SUZ12 polycomb repressive complex 2 subunit

NCBI chr11:79,883,932...79,924,949
Ensembl chr11:79,883,932...79,924,949

Tfap2c

transcription factor AP-2, gamma

PMID:12015300

NCBI chr 2:172,387,599...172,400,542
Ensembl chr 2:172,391,513...172,400,542

tripartite motif-containing 28

NCBI chr 7:12,758,079...12,764,959
Ensembl chr 7:12,733,041...12,764,962

X (inactive)-specific transcript, opposite strand

NCBI chr X:102,475,123...102,528,563
Ensembl chr X:102,475,123...102,528,563

Washc1

WASH complex subunit 1

PMID:23974797

NCBI chr17:66,418,524...66,427,498
Ensembl chr17:66,418,540...66,427,498

abnormal extraembryonic ectoderm morphology

Symbol

Object Name

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Acvr1b

activin A receptor, type 1B

PMID:9512518

NCBI chr15:101,071,953...101,111,565
Ensembl chr15:101,071,948...101,111,565

Arc

activity regulated cytoskeletal-associated protein

PMID:10727859

NCBI chr15:74,540,930...74,544,419
Ensembl chr15:74,540,932...74,544,419

Atad3a

ATPase family, AAA domain containing 3A

PMID:23372768

NCBI chr 4:155,825,097...155,845,579
Ensembl chr 4:155,825,098...155,845,550

Bmp5

bone morphogenetic protein 5

PMID:5021246

NCBI chr 9:75,682,647...75,807,598
Ensembl chr 9:75,682,646...75,807,592

cullin 3

NCBI chr 1:80,242,640...80,318,407
Ensembl chr 1:80,242,640...80,318,197

ferredoxin reductase

NCBI chr11:115,158,850...115,167,925
Ensembl chr11:115,158,850...115,167,876

Furin

furin (paired basic amino acid cleaving enzyme)

PMID:12447384

NCBI chr 7:80,038,942...80,055,188
Ensembl chr 7:80,038,333...80,055,184

nodal

NCBI chr10:61,253,751...61,261,117
Ensembl chr10:61,253,751...61,261,117

PAXIP1 associated glutamate rich protein 1A

NCBI chr 7:126,614,223...126,616,524
Ensembl chr 7:126,614,205...126,616,524
Ensembl chr 7:126,614,205...126,616,524

Pcsk6

proprotein convertase subtilisin/kexin type 6

PMID:12447384

NCBI chr 7:65,511,884...65,700,134
Ensembl chr 7:65,511,482...65,700,134

Pofut2

protein O-fucosyltransferase 2

PMID:20637190

NCBI chr10:77,095,056...77,105,420
Ensembl chr10:77,095,052...77,105,409

Pou2f1

POU domain, class 2, transcription factor 1

PMID:20876643

NCBI chr 1:165,692,719...165,830,318
Ensembl chr 1:165,692,723...165,830,247

Ppp1r8

protein phosphatase 1, regulatory subunit 8

PMID:15199142

NCBI chr 4:132,554,235...132,570,480
Ensembl chr 4:132,554,240...132,570,480

Rab10

RAB10, member RAS oncogene family

PMID:25860786

NCBI chr12:3,297,428...3,359,969
Ensembl chr12:3,297,428...3,359,969

SMAD family member 1

NCBI chr 8:80,065,024...80,126,057
Ensembl chr 8:80,065,024...80,126,147

Tfap2c

transcription factor AP-2, gamma

PMID:12015300

NCBI chr 2:172,387,599...172,400,542
Ensembl chr 2:172,391,513...172,400,542

Xist

inactive X specific transcripts

PMID:19036803

NCBI chr X:102,503,979...102,526,839
Ensembl chr X:102,503,972...102,526,860

abnormal extraembryonic endoderm morphology

Symbol

Object Name

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

ferredoxin reductase

NCBI chr11:115,158,850...115,167,925
Ensembl chr11:115,158,850...115,167,876

abnormal maternal decidual layer morphology

Symbol

Object Name

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Akt1

thymoma viral proto-oncogene 1

PMID:12783884

NCBI chr12:112,620,255...112,641,318
Ensembl chr12:112,620,255...112,641,318

Amhr2

anti-Mullerian hormone type 2 receptor

PMID:17404209 PMID:20858757

NCBI chr15:102,353,437...102,363,075
Ensembl chr15:102,353,802...102,363,068

Cbs

cystathionine beta-synthase

PMID:16984962

NCBI chr17:31,831,597...31,856,207
Ensembl chr17:31,827,868...31,856,212

CD247 antigen

NCBI chr 1:165,607,514...165,698,722
Ensembl chr 1:165,616,250...165,704,846

Comt

catechol-O-methyltransferase

PMID:18469803

NCBI chr16:18,225,632...18,247,006
Ensembl chr16:18,225,636...18,245,602

Cr1l

complement component (3b/4b) receptor 1-like

PMID:10642554

NCBI chr 1:194,781,019...194,813,878
Ensembl chr 1:194,779,690...194,813,894

Egfr

epidermal growth factor receptor

PMID:7618085

NCBI chr11:16,700,153...16,868,158
Ensembl chr11:16,702,203...16,868,158

Elavl1

ELAV (embryonic lethal, abnormal vision)-like 1 (Hu antigen R)

PMID:19307312

NCBI chr 8:4,334,781...4,375,104
Ensembl chr 8:4,335,382...4,375,413

Fcer1g

Fc receptor, IgE, high affinity I, gamma polypeptide

NCBI chr 1:171,057,141...171,061,918
Ensembl chr 1:171,057,141...171,061,934

gene trap ROSA 26, Philippe Soriano

NCBI chr 6:113,044,389...113,054,205
Ensembl chr 6:113,044,389...113,054,294

Hcst

hematopoietic cell signal transducer

NCBI chr 7:30,117,137...30,119,279
Ensembl chr 7:30,117,137...30,119,279

interferon gamma

NCBI chr10:118,276,951...118,281,799
Ensembl chr10:118,276,951...118,281,797

Ifngr1

interferon gamma receptor 1

PMID:10411532

NCBI chr10:19,467,697...19,485,977
Ensembl chr10:19,467,697...19,485,977

Il2rb

interleukin 2 receptor, beta chain

PMID:9002646

NCBI chr15:78,363,456...78,396,569
Ensembl chr15:78,363,456...78,379,471

Il2rg

interleukin 2 receptor, gamma chain

PMID:12069389

NCBI chr X:100,307,991...100,311,861
Ensembl chr X:100,307,984...100,311,861

murinoglobulin 1

NCBI chr 6:121,815,455...121,866,016
Ensembl chr 6:121,815,500...121,866,016

Nr2f2

nuclear receptor subfamily 2, group F, member 2

PMID:17404209

NCBI chr 7:70,001,694...70,016,494
Ensembl chr 7:70,001,692...70,016,483

Pgr

progesterone receptor

NCBI chr 9:8,890,017...8,968,612
Ensembl chr 9:8,899,834...8,968,612

phosphatase and tensin homolog

PMID:20858757

NCBI chr19:32,734,977...32,803,560
Ensembl chr19:32,734,897...32,803,560

Ptp4a2

protein tyrosine phosphatase 4a2

PMID:22791713

NCBI chr 4:129,714,262...129,743,796
Ensembl chr 4:129,705,012...129,743,796

Pzp

PZP, alpha-2-macroglobulin like

PMID:14580373

NCBI chr 6:128,460,530...128,503,683
Ensembl chr 6:128,460,530...128,503,683

Ror1

receptor tyrosine kinase-like orphan receptor 1

NCBI chr 4:99,952,988...100,302,003
Ensembl chr 4:99,952,988...100,301,962

Ror2

receptor tyrosine kinase-like orphan receptor 2

NCBI chr13:53,263,353...53,440,160
Ensembl chr13:53,263,348...53,440,160

Smchd1

SMC hinge domain containing 1

PMID:18425126

NCBI chr17:71,651,484...71,782,361
Ensembl chr17:71,651,484...71,782,338

Tyrobp

TYRO protein tyrosine kinase binding protein

NCBI chr 7:30,113,207...30,117,007
Ensembl chr 7:30,113,185...30,117,010

Wnt5a

wingless-type MMTV integration site family, member 5A

NCBI chr14:28,224,962...28,249,405
Ensembl chr14:28,226,707...28,249,405

Wnt6

wingless-type MMTV integration site family, member 6

PMID:23175771

NCBI chr 1:74,793,499...74,824,481
Ensembl chr 1:74,811,051...74,824,481

abnormal mural trophectoderm morphology

Symbol

Object Name

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

laminin B1

NCBI chr12:31,315,230...31,379,643
Ensembl chr12:31,315,233...31,379,643

abnormal parietal endoderm morphology

Symbol

Object Name

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Brca1

breast cancer 1, early onset

PMID:8674108

NCBI chr11:101,379,587...101,442,808
Ensembl chr11:101,379,590...101,442,781

Col4a1

collagen, type IV, alpha 1

PMID:15905400

NCBI chr 8:11,248,423...11,362,889
Ensembl chr 8:11,248,423...11,362,826

Ctdnep1

CTD nuclear envelope phosphatase 1

PMID:23469192

NCBI chr11:69,871,994...69,881,427
Ensembl chr11:69,871,982...69,881,427

Dad1

defender against cell death 1

PMID:10720432

NCBI chr14:54,472,942...54,491,386
Ensembl chr14:54,472,936...54,491,561

Dhx9

DEAH (Asp-Glu-Ala-His) box polypeptide 9

PMID:9811865

NCBI chr 1:153,331,502...153,363,464
Ensembl chr 1:153,331,504...153,363,406

gene trap ROSA 26, Philippe Soriano

PMID:10477299

NCBI chr 6:113,044,389...113,054,205
Ensembl chr 6:113,044,389...113,054,294

laminin, alpha 1

NCBI chr17:68,004,129...68,129,640
Ensembl chr17:68,004,254...68,129,642

laminin B1

NCBI chr12:31,315,230...31,379,643
Ensembl chr12:31,315,233...31,379,643

Mesd

mesoderm development LRP chaperone

PMID:21337463

NCBI chr 7:83,533,074...83,549,519
Ensembl chr 7:83,533,674...83,550,740

scleraxis

NCBI chr15:76,341,594...76,343,668
Ensembl chr15:76,341,652...76,343,658

Tsg101

tumor susceptibility gene 101

PMID:11172041

NCBI chr 7:46,538,697...46,569,717
Ensembl chr 7:46,538,697...46,569,717

abnormal parietal yolk sac morphology

Symbol

Object Name

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

fos-like antigen 1

NCBI chr19:5,497,726...5,505,966
Ensembl chr19:5,497,575...5,505,974

Fzd2

frizzled class receptor 2

PMID:23095888

NCBI chr11:102,495,257...102,498,884
Ensembl chr11:102,495,222...102,498,884

Fzd7

frizzled class receptor 7

PMID:23095888

NCBI chr 1:59,521,306...59,526,114
Ensembl chr 1:59,521,583...59,526,114

heart and neural crest derivatives expressed 1

PMID:9500551

NCBI chr11:57,719,539...57,722,973
Ensembl chr11:57,719,531...57,723,644

nodal

NCBI chr10:61,253,751...61,261,117
Ensembl chr10:61,253,751...61,261,117

tripartite motif-containing 28

NCBI chr 7:12,758,079...12,764,959
Ensembl chr 7:12,733,041...12,764,962

abnormal physiological umbilical hernia morphology

Symbol

Object Name

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Brd2

bromodomain containing 2

NCBI chr17:34,330,993...34,341,581
Ensembl chr17:34,330,997...34,341,608

abnormal placenta fetal blood space morphology

Symbol

Object Name

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Adamts3

a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 3

PMID:26446156

NCBI chr 5:89,821,700...90,031,521
Ensembl chr 5:89,824,946...90,031,193

adrenomedullin

NCBI chr 7:110,226,864...110,229,027
Ensembl chr 7:110,226,868...110,229,027

Ccdc134

coiled-coil domain containing 134

PMID:29115376

NCBI chr15:82,012,101...82,026,404
Ensembl chr15:82,012,123...82,026,404

glial cells missing homolog 1

PMID:22275534

NCBI chr 9:77,959,240...77,972,906
Ensembl chr 9:77,959,206...77,972,906

Llgl2

LLGL2 scribble cell polarity complex component

PMID:21606200

NCBI chr11:115,714,855...115,746,606
Ensembl chr11:115,714,875...115,746,606

mitochondrial trans-2-enoyl-CoA reductase

NCBI chr 4:131,570,755...131,595,098
Ensembl chr 4:131,570,781...131,595,097

microRNA 127

NCBI chr12:109,559,280...109,559,349
Ensembl chr12:109,559,280...109,559,349

myosin, heavy polypeptide 9, non-muscle

PMID:21908426

NCBI chr15:77,644,785...77,726,375
Ensembl chr15:77,644,787...77,726,375

abnormal placenta hemotrichorial membrane morphology

Symbol

Object Name

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

peroxisome proliferator activated receptor gamma

PMID:10549290

NCBI chr 6:115,337,840...115,467,365
Ensembl chr 6:115,337,912...115,467,360

abnormal placenta intervillous maternal lacunae morphology

Symbol

Object Name

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

adrenomedullin

NCBI chr 7:110,226,864...110,229,027
Ensembl chr 7:110,226,868...110,229,027

Ccdc8

coiled-coil domain containing 8

PMID:31343991

NCBI chr 7:16,727,827...16,731,440
Ensembl chr 7:16,726,633...16,731,441

Colgalt1

collagen beta(1-O)galactosyltransferase 1

PMID:31759980

NCBI chr 8:72,063,631...72,077,555
Ensembl chr 8:72,063,642...72,077,555

Fubp1

far upstream element (FUSE) binding protein 1

PMID:26774856

NCBI chr 3:151,916,059...151,942,467
Ensembl chr 3:151,916,059...151,942,463

gap junction protein, beta 3

NCBI chr 4:127,219,028...127,224,629
Ensembl chr 4:127,219,028...127,224,637

Llgl2

LLGL2 scribble cell polarity complex component

PMID:21606200

NCBI chr11:115,714,855...115,746,606
Ensembl chr11:115,714,875...115,746,606

mitochondrial trans-2-enoyl-CoA reductase

NCBI chr 4:131,570,755...131,595,098
Ensembl chr 4:131,570,781...131,595,097

myosin, heavy polypeptide 9, non-muscle

PMID:21908426

NCBI chr15:77,644,785...77,726,375
Ensembl chr15:77,644,787...77,726,375

Sp1

trans-acting transcription factor 1

PMID:17584888

NCBI chr15:102,314,751...102,344,839
Ensembl chr15:102,314,578...102,344,839

Sp3

trans-acting transcription factor 3

PMID:17584888

NCBI chr 2:72,766,774...72,810,790
Ensembl chr 2:72,766,771...72,810,790

Tgif1

TGFB-induced factor homeobox 1

PMID:23459932

NCBI chr17:71,151,200...71,160,527
Ensembl chr17:71,151,200...71,160,541

abnormal placenta junctional zone morphology

Symbol

Object Name

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Alkbh1

alkB homolog 1, histone H2A dioxygenase

PMID:18163532

NCBI chr12:87,474,847...87,490,609
Ensembl chr12:87,472,610...87,490,787

Cbs

cystathionine beta-synthase

PMID:16984962

NCBI chr17:31,831,597...31,856,207
Ensembl chr17:31,827,868...31,856,212

Colgalt1

collagen beta(1-O)galactosyltransferase 1

PMID:31759980

NCBI chr 8:72,063,631...72,077,555
Ensembl chr 8:72,063,642...72,077,555

Fbxl12

F-box and leucine-rich repeat protein 12

PMID:26124079

NCBI chr 9:20,549,045...20,556,064
Ensembl chr 9:20,529,414...20,556,063

Ggnbp2

gametogenetin binding protein 2

PMID:26764350

NCBI chr11:84,723,187...84,761,668
Ensembl chr11:84,723,187...84,761,643

Plac1

placental specific protein 1

PMID:22729990

NCBI chr X:52,158,870...52,328,987
Ensembl chr X:52,158,872...52,328,988

Prl7d1

prolactin family 7, subfamily d, member 1

PMID:31012985

NCBI chr13:27,892,981...27,900,720
Ensembl chr13:27,890,320...27,900,719

STE20-like kinase

NCBI chr19:47,568,458...47,633,685
Ensembl chr19:47,568,117...47,633,685

abnormal placenta labyrinth morphology

Symbol

Object Name

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Abca1

ATP-binding cassette, sub-family A (ABC1), member 1

PMID:10980140

NCBI chr 4:53,030,789...53,159,988
Ensembl chr 4:53,030,787...53,159,895

Adamts3

a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 3

PMID:26446156

NCBI chr 5:89,821,700...90,031,521
Ensembl chr 5:89,824,946...90,031,193

adrenomedullin

NCBI chr 7:110,226,864...110,229,027
Ensembl chr 7:110,226,868...110,229,027

Amhr2

anti-Mullerian hormone type 2 receptor

PMID:20858757

NCBI chr15:102,353,437...102,363,075
Ensembl chr15:102,353,802...102,363,068

Arap3

ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3

PMID:20978237

NCBI chr18:38,105,676...38,132,583
Ensembl chr18:38,105,681...38,132,022

Asb4

ankyrin repeat and SOCS box-containing 4

PMID:24586788

NCBI chr 6:5,383,386...5,433,022
Ensembl chr 6:5,383,386...5,433,022

Atf2

activating transcription factor 2

PMID:10364225

NCBI chr 2:73,646,853...73,723,094
Ensembl chr 2:73,646,853...73,722,983

Bcl9l

B cell CLL/lymphoma 9-like

PMID:22109522

NCBI chr 9:44,394,122...44,423,203
Ensembl chr 9:44,394,122...44,423,193

Birc6

baculoviral IAP repeat-containing 6

PMID:15485903

NCBI chr17:74,835,247...75,010,351
Ensembl chr17:74,835,290...75,010,351

Braf

Braf transforming gene

PMID:16432225

NCBI chr 6:39,580,171...39,702,592
Ensembl chr 6:39,580,171...39,702,397

Calcrl

calcitonin receptor-like

PMID:23635772

NCBI chr 2:84,160,970...84,255,786
Ensembl chr 2:84,160,970...84,255,755

calpain 1

NCBI chr19:6,038,573...6,065,855
Ensembl chr19:6,038,573...6,065,927

calpain 2

NCBI chr 1:182,294,818...182,345,175
Ensembl chr 1:182,294,825...182,345,173

Cbs

cystathionine beta-synthase

PMID:16984962

NCBI chr17:31,831,597...31,856,207
Ensembl chr17:31,827,868...31,856,212

Cdkn1c

cyclin-dependent kinase inhibitor 1C (P57)

PMID:11044465 PMID:12468647

NCBI chr 7:143,012,076...143,014,802
Ensembl chr 7:143,012,076...143,014,787

Cdx2

caudal type homeobox 2

NCBI chr 5:147,237,710...147,244,059
Ensembl chr 5:147,237,615...147,244,080

Cdx4

caudal type homeobox 4

NCBI chr X:102,365,004...102,373,830
Ensembl chr X:102,365,004...102,374,198

Chm

choroidermia (RAB escort protein 1)

PMID:15242790

NCBI chr X:111,950,289...112,095,236
Ensembl chr X:111,950,290...112,095,214

cullin 4B

NCBI chr X:37,620,493...37,665,073
Ensembl chr X:37,622,151...37,665,073

Dlc1

deleted in liver cancer 1

PMID:20199662

NCBI chr 8:37,034,893...37,420,343
Ensembl chr 8:37,034,905...37,420,297

Dlk1

delta like non-canonical Notch ligand 1

PMID:23059197

NCBI chr12:109,418,411...109,429,262
Ensembl chr12:109,418,749...109,429,262

Dlx3

distal-less homeobox 3

PMID:9874789

NCBI chr11:95,010,943...95,016,122
Ensembl chr11:95,010,945...95,016,122

Dph3

diphthamine biosynthesis 3

PMID:16648478

NCBI chr14:31,802,474...31,807,649
Ensembl chr14:31,802,523...31,807,686

Dusp9

dual specificity phosphatase 9

PMID:16135819

NCBI chr X:72,682,995...72,687,120
Ensembl chr X:72,683,025...72,687,120

Edil3

EGF-like repeats and discoidin I-like domains 3

PMID:19464366 PMID:20978237

NCBI chr13:88,969,591...89,471,344
Ensembl chr13:88,969,591...89,471,342

Egfr

epidermal growth factor receptor

PMID:7618084 PMID:15366372 PMID:19115345

NCBI chr11:16,700,153...16,868,158
Ensembl chr11:16,702,203...16,868,158

Egln1

egl-9 family hypoxia-inducible factor 1

PMID:16966370

NCBI chr 8:125,635,326...125,675,993
Ensembl chr 8:125,635,326...125,676,063

Emg1

EMG1 N1-specific pseudouridine methyltransferase

PMID:25708872

NCBI chr 6:124,681,333...124,689,151
Ensembl chr 6:124,681,048...124,689,141

Epcam

epithelial cell adhesion molecule

PMID:20046825

NCBI chr17:87,943,407...87,958,555
Ensembl chr17:87,943,407...87,958,557

Ern1

endoplasmic reticulum (ER) to nucleus signalling 1

PMID:19805353

NCBI chr11:106,285,474...106,378,701
Ensembl chr11:106,285,476...106,378,678

ets variant 2

NCBI chr 7:30,333,041...30,335,934
Ensembl chr 7:30,333,041...30,335,277

Fbxw8

F-box and WD-40 domain protein 8

PMID:16880526

NCBI chr 5:118,203,046...118,293,523
Ensembl chr 5:118,203,030...118,293,529

Fgg

fibrinogen gamma chain

PMID:11891199

NCBI chr 3:82,915,031...82,922,363
Ensembl chr 3:82,915,031...82,922,356

fos-like antigen 1

NCBI chr19:5,497,726...5,505,966
Ensembl chr19:5,497,575...5,505,974

forkhead box D3

NCBI chr 4:99,544,536...99,546,908
Ensembl chr 4:99,544,536...99,546,859

Fzr1

fizzy and cell division cycle 20 related 1

PMID:20530197

NCBI chr10:81,202,713...81,214,204
Ensembl chr10:81,202,056...81,214,350

G6pdx

glucose-6-phosphate dehydrogenase X-linked

PMID:12169625

NCBI chr X:73,453,089...73,472,486
Ensembl chr X:73,453,089...73,472,800

Gab1

growth factor receptor bound protein 2-associated protein 1

PMID:10995442 PMID:17881575

NCBI chr 8:81,491,060...81,607,148
Ensembl chr 8:81,491,067...81,607,148

glial cells missing homolog 1

PMID:22275534

NCBI chr 9:77,959,240...77,972,906
Ensembl chr 9:77,959,206...77,972,906

Ggnbp2

gametogenetin binding protein 2

PMID:26764350

NCBI chr11:84,723,187...84,761,668
Ensembl chr11:84,723,187...84,761,643

gene trap ROSA 26, Philippe Soriano

PMID:21852535

NCBI chr 6:113,044,389...113,054,205
Ensembl chr 6:113,044,389...113,054,294

heart and neural crest derivatives expressed 1

PMID:23911935

NCBI chr11:57,719,539...57,722,973
Ensembl chr11:57,719,531...57,723,644

Hey1

hairy/enhancer-of-split related with YRPW motif 1

PMID:15107403

NCBI chr 3:8,728,419...8,732,098
Ensembl chr 3:8,728,419...8,732,316

Hey2

hairy/enhancer-of-split related with YRPW motif 2

PMID:15107403

NCBI chr10:30,708,355...30,718,779
Ensembl chr10:30,708,355...30,718,797

Hsd17b2

hydroxysteroid (17-beta) dehydrogenase 2

PMID:18048640

NCBI chr 8:118,427,721...118,485,769
Ensembl chr 8:118,428,643...118,485,766

heat shock factor 1

NCBI chr15:76,361,562...76,385,355
Ensembl chr15:76,361,622...76,386,113

Hsp90ab1

heat shock protein 90 alpha (cytosolic), class B member 1

PMID:10654595

NCBI chr17:45,878,704...45,884,187
Ensembl chr17:45,878,701...45,884,197

Hus1

HUS1 checkpoint clamp component

PMID:10921903

NCBI chr11:8,943,137...8,961,240
Ensembl chr11:8,943,137...8,961,191

Il11ra1

interleukin 11 receptor, alpha chain 1

PMID:9679067

NCBI chr 4:41,760,443...41,769,473
Ensembl chr 4:41,699,989...41,769,474

Itgb1

integrin beta 1 (fibronectin receptor beta)

PMID:12620989

NCBI chr 8:129,412,135...129,460,060
Ensembl chr 8:129,412,135...129,459,681

integrin beta 3

NCBI chr11:104,498,826...104,561,302
Ensembl chr11:104,498,826...104,561,302

Kras

Kirsten rat sarcoma viral oncogene homolog

PMID:17369402

NCBI chr 6:145,162,425...145,196,144
Ensembl chr 6:145,162,425...145,195,965

keratin 19

NCBI chr11:100,031,636...100,036,752
Ensembl chr11:100,031,636...100,039,491

keratin 8

NCBI chr15:101,905,146...101,912,777
Ensembl chr15:101,905,133...101,912,917

Llgl2

LLGL2 scribble cell polarity complex component

PMID:21606200

NCBI chr11:115,714,855...115,746,606
Ensembl chr11:115,714,875...115,746,606

Map2k1

mitogen-activated protein kinase kinase 1

PMID:10209122 PMID:16887817

NCBI chr 9:64,093,051...64,160,887
Ensembl chr 9:64,093,052...64,160,913

Mapk1

mitogen-activated protein kinase 1

PMID:14622137

NCBI chr16:16,801,246...16,865,317
Ensembl chr16:16,801,246...16,865,317

Mapk14

mitogen-activated protein kinase 14

PMID:10949032

NCBI chr17:28,910,243...28,967,379
Ensembl chr17:28,910,303...28,967,380

Mapk7

mitogen-activated protein kinase 7

PMID:14675480

NCBI chr11:61,379,638...61,385,101
Ensembl chr11:61,379,638...61,385,232

mitochondrial trans-2-enoyl-CoA reductase

NCBI chr 4:131,570,755...131,595,098
Ensembl chr 4:131,570,781...131,595,097

Med1

mediator complex subunit 1

PMID:10747854

NCBI chr11:98,042,980...98,084,121
Ensembl chr11:98,042,980...98,084,119

Meox2

mesenchyme homeobox 2

PMID:19464366

NCBI chr12:37,158,539...37,229,533
Ensembl chr12:37,158,539...37,229,533

met proto-oncogene

NCBI chr 6:17,463,351...17,573,979
Ensembl chr 6:17,463,799...17,573,979

microRNA 127

NCBI chr12:109,559,280...109,559,349
Ensembl chr12:109,559,280...109,559,349

Mmp14

matrix metallopeptidase 14 (membrane-inserted)

PMID:20858856

NCBI chr14:54,669,055...54,679,913
Ensembl chr14:54,669,069...54,682,821

Mmp15

matrix metallopeptidase 15

PMID:20858856

NCBI chr 8:96,078,924...96,100,921
Ensembl chr 8:96,078,896...96,101,708

Mpi

mannose phosphate isomerase

PMID:16339137

NCBI chr 9:57,448,744...57,460,095
Ensembl chr 9:57,451,539...57,460,046

murinoglobulin 1

NCBI chr 6:121,815,455...121,866,016
Ensembl chr 6:121,815,500...121,866,016

myosin, heavy polypeptide 9, non-muscle

PMID:20679233

NCBI chr15:77,644,785...77,726,375
Ensembl chr15:77,644,787...77,726,375

notch 2

NCBI chr 3:97,920,854...98,057,683
Ensembl chr 3:97,920,843...98,057,677

Nsdhl

NAD(P) dependent steroid dehydrogenase-like

PMID:15639195

NCBI chr X:71,962,127...72,002,134
Ensembl chr X:71,962,163...72,002,120

Pak4

p21 (RAC1) activated kinase 4

PMID:19464366

NCBI chr 7:28,258,244...28,297,609
Ensembl chr 7:28,258,244...28,297,610

polybromo 1

NCBI chr14:30,741,095...30,843,549
Ensembl chr14:30,741,095...30,843,549

Pcgf6

polycomb group ring finger 6

PMID:28304275

NCBI chr19:47,022,056...47,039,379
Ensembl chr19:47,022,056...47,039,345

Pgp

phosphoglycolate phosphatase

PMID:27731369

NCBI chr17:24,689,400...24,692,084
Ensembl chr17:24,689,366...24,692,084

polo like kinase 2

NCBI chr13:110,531,578...110,537,378
Ensembl chr13:110,531,580...110,537,378

peroxisome proliferator activated receptor gamma

PMID:10549290 PMID:10549291

NCBI chr 6:115,337,840...115,467,365
Ensembl chr 6:115,337,912...115,467,360

Prdm1

PR domain containing 1, with ZNF domain

PMID:15750184

NCBI chr10:44,313,170...44,404,548
Ensembl chr10:44,313,173...44,404,497

phosphatase and tensin homolog

PMID:20858757

NCBI chr19:32,734,977...32,803,560
Ensembl chr19:32,734,897...32,803,560

Pzp

PZP, alpha-2-macroglobulin like

PMID:14580373

NCBI chr 6:128,460,530...128,503,683
Ensembl chr 6:128,460,530...128,503,683

Raf1

v-raf-leukemia viral oncogene 1

PMID:9767153 PMID:11296228

NCBI chr 6:115,595,530...115,653,596
Ensembl chr 6:115,595,028...115,653,596

Rb1

RB transcriptional corepressor 1

PMID:16449662

NCBI chr14:73,430,298...73,563,446
Ensembl chr14:73,421,113...73,563,262

Rictor

RPTOR independent companion of MTOR, complex 2

PMID:16962829

NCBI chr15:6,737,827...6,829,882
Ensembl chr15:6,737,860...6,829,882

R-spondin 3

NCBI chr10:29,329,102...29,411,863
Ensembl chr10:29,328,412...29,411,863

Rtl1

retrotransposon Gaglike 1

PMID:18176565

NCBI chr12:109,531,141...109,570,852
Ensembl chr12:109,555,627...109,566,764

Rxra

retinoid X receptor alpha

PMID:19255444

NCBI chr 2:27,566,457...27,653,331
Ensembl chr 2:27,566,452...27,652,969

Setd2

SET domain containing 2

PMID:20133625

NCBI chr 9:110,361,368...110,447,701
Ensembl chr 9:110,361,665...110,447,701

Setd5

SET domain containing 5

PMID:27864380

NCBI chr 6:113,054,326...113,130,393
Ensembl chr 6:113,054,326...113,130,396

STE20-like kinase

NCBI chr19:47,568,458...47,633,685
Ensembl chr19:47,568,117...47,633,685

sorting nexin 13

NCBI chr12:35,096,101...35,197,479
Ensembl chr12:35,097,185...35,197,478

Socs3

suppressor of cytokine signaling 3

PMID:11481489 PMID:16517610

NCBI chr11:117,856,905...117,860,192
Ensembl chr11:117,856,905...117,860,873

Sp3

trans-acting transcription factor 3

PMID:17584888

NCBI chr 2:72,766,774...72,810,790
Ensembl chr 2:72,766,771...72,810,790

Spint1

serine protease inhibitor, Kunitz type 1

PMID:17174946

NCBI chr 2:119,067,841...119,080,016
Ensembl chr 2:119,067,843...119,080,008

Spint2

serine protease inhibitor, Kunitz type 2

PMID:22952456

NCBI chr 7:28,955,755...28,981,484
Ensembl chr 7:28,955,748...28,981,337

Ss18

SS18, nBAF chromatin remodeling complex subunit

PMID:16926188

NCBI chr18:14,758,686...14,817,476
Ensembl chr18:14,757,255...14,815,971

St14

suppression of tumorigenicity 14 (colon carcinoma)

PMID:22952456

NCBI chr 9:30,999,886...31,043,138
Ensembl chr 9:31,000,698...31,043,149

Stk3

serine/threonine kinase 3

NCBI chr15:34,875,645...35,155,990
Ensembl chr15:34,875,642...35,179,067

Stk4

serine/threonine kinase 4

NCBI chr 2:163,916,033...163,997,444
Ensembl chr 2:163,912,242...163,997,444

Syde1

synapse defective 1, Rho GTPase, homolog 1 (C. elegans)

PMID:27917469

NCBI chr10:78,420,336...78,427,798
Ensembl chr10:78,420,337...78,427,798

Syna

syncytin a

PMID:19564597 PMID:22032925

NCBI chr 5:134,586,108...134,605,891
Ensembl chr 5:134,587,000...134,589,025

syncytin b

NCBI chr14:69,527,827...69,549,857
Ensembl chr14:69,526,793...69,531,748

Tgfbr1

transforming growth factor, beta receptor I

PMID:11285230

NCBI chr 4:47,353,222...47,414,926
Ensembl chr 4:47,353,222...47,414,931

Tgif1

TGFB-induced factor homeobox 1

PMID:23459932

NCBI chr17:71,151,200...71,160,527
Ensembl chr17:71,151,200...71,160,541

Tlk2

tousled-like kinase 2 (Arabidopsis)

PMID:28708136

NCBI chr11:105,066,869...105,174,785
Ensembl chr11:105,069,633...105,174,785

Trip12

thyroid hormone receptor interactor 12

PMID:22028794

NCBI chr 1:84,698,910...84,818,285
Ensembl chr 1:84,698,910...84,818,237

X (inactive)-specific transcript, opposite strand

PMID:21852535

NCBI chr X:102,475,123...102,528,563
Ensembl chr X:102,475,123...102,528,563

Ubp1

upstream binding protein 1

PMID:15282311

NCBI chr 9:113,760,002...113,807,095
Ensembl chr 9:113,760,002...113,806,270

Vhl

von Hippel-Lindau tumor suppressor

PMID:16652107

NCBI chr 6:113,600,955...113,608,595
Ensembl chr 6:113,600,920...113,608,594

Vps53

VPS53 GARP complex subunit

PMID:18511934

NCBI chr11:75,937,052...76,070,464
Ensembl chr11:75,937,052...76,070,473

Wnk1

WNK lysine deficient protein kinase 1

PMID:19644017

NCBI chr 6:119,900,930...120,015,659
Ensembl chr 6:119,900,930...120,015,633

Wnt2

wingless-type MMTV integration site family, member 2

PMID:8951051

NCBI chr 6:17,988,939...18,032,771
Ensembl chr 6:17,988,939...18,030,584

abnormal placenta metrial gland morphology

Symbol

Object Name

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Il2rg

interleukin 2 receptor, gamma chain

PMID:12069389

NCBI chr X:100,307,991...100,311,861
Ensembl chr X:100,307,984...100,311,861

abnormal placenta morphology

Symbol

Object Name

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

adenosine deaminase

NCBI chr 2:163,568,491...163,592,161
Ensembl chr 2:163,568,504...163,592,159

Adamts6

a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 6

NCBI chr13:104,423,026...104,633,203
Ensembl chr13:104,424,343...104,633,203

adenylate cyclase 9

NCBI chr16:4,102,750...4,255,094
Ensembl chr16:4,105,393...4,238,362

adrenomedullin

NCBI chr 7:110,226,864...110,229,027
Ensembl chr 7:110,226,868...110,229,027

Adora2b

adenosine A2b receptor

PMID:25538227

NCBI chr11:62,139,810...62,157,278
Ensembl chr11:62,139,810...62,157,279

Aff4

AF4/FMR2 family, member 4

NCBI chr11:53,240,807...53,312,657
Ensembl chr11:53,241,660...53,312,657

Ago2

argonaute RISC catalytic subunit 2

PMID:15284456

NCBI chr15:72,973,474...73,056,796
Ensembl chr15:72,967,693...73,056,784

Akt1

thymoma viral proto-oncogene 1

PMID:12783884

NCBI chr12:112,620,255...112,641,318
Ensembl chr12:112,620,255...112,641,318

Anapc15

anaphase promoting complex C subunit 15

NCBI chr 7:101,530,508...101,551,056
Ensembl chr 7:101,512,922...101,551,056

Apela

apelin receptor early endogenous ligand

PMID:28663440

NCBI chr 8:65,481,069...65,489,988
Ensembl chr 8:65,481,069...65,489,988

Arhgef7

Rho guanine nucleotide exchange factor (GEF7)

NCBI chr 8:11,778,053...11,885,219
Ensembl chr 8:11,777,721...11,885,219

Arid1a

AT rich interactive domain 1A (SWI-like)

PMID:23129809

NCBI chr 4:133,406,319...133,484,682
Ensembl chr 4:133,406,319...133,484,080

Arid3a

AT rich interactive domain 3A (BRIGHT-like)

NCBI chr10:79,762,877...79,790,852
Ensembl chr10:79,762,877...79,790,852

Arnt

aryl hydrocarbon receptor nuclear translocator

PMID:9398442

NCBI chr 3:95,341,674...95,404,551
Ensembl chr 3:95,341,699...95,404,551

Atr

ataxia telangiectasia and Rad3 related

PMID:19620979

NCBI chr 9:95,739,650...95,834,813
Ensembl chr 9:95,739,650...95,833,834

Bap1

Brca1 associated protein 1

NCBI chr14:30,973,358...30,981,887
Ensembl chr14:30,973,407...30,981,901

Bbs1

Bardet-Biedl syndrome 1 (human)

NCBI chr19:4,936,906...4,956,681
Ensembl chr19:4,936,906...4,956,656

Bcas3

BCAS3 microtubule associated cell migration factor

PMID:29618843

NCBI chr11:85,243,611...85,716,884
Ensembl chr11:85,243,993...85,716,884

Birc6

baculoviral IAP repeat-containing 6

PMID:12904583

NCBI chr17:74,835,247...75,010,351
Ensembl chr17:74,835,290...75,010,351

Braf

Braf transforming gene

PMID:16432225

NCBI chr 6:39,580,171...39,702,592
Ensembl chr 6:39,580,171...39,702,397

Cacna1c

calcium channel, voltage-dependent, L type, alpha 1C subunit

NCBI chr 6:118,564,201...119,174,345
Ensembl chr 6:118,564,201...119,173,851

Camsap3

calmodulin regulated spectrin-associated protein family, member 3

NCBI chr 8:3,637,237...3,659,075
Ensembl chr 8:3,637,293...3,659,075

Cand1

cullin associated and neddylation disassociated 1

NCBI chr10:119,034,717...119,075,960
Ensembl chr10:119,035,160...119,075,960

Ccdc25

coiled-coil domain containing 25

NCBI chr14:66,074,751...66,104,053
Ensembl chr14:66,074,751...66,104,056

Ccn1

cellular communication network factor 1

PMID:12446788

NCBI chr 3:145,352,726...145,355,740
Ensembl chr 3:145,352,731...145,355,736

cyclin E1

NCBI chr 7:37,797,409...37,806,915
Ensembl chr 7:37,797,409...37,806,959

cyclin E2

NCBI chr 4:11,190,489...11,204,779
Ensembl chr 4:11,191,351...11,204,779

cadherin 1

NCBI chr 8:107,329,982...107,396,879
Ensembl chr 8:107,329,983...107,396,878

Cdkn1c

cyclin-dependent kinase inhibitor 1C (P57)

PMID:19276117

NCBI chr 7:143,012,076...143,014,802
Ensembl chr 7:143,012,076...143,014,787

Cdx2

caudal type homeobox 2

NCBI chr 5:147,237,710...147,244,059
Ensembl chr 5:147,237,615...147,244,080

Cdx4

caudal type homeobox 4

NCBI chr X:102,365,004...102,373,830
Ensembl chr X:102,365,004...102,374,198

Cert1

ceramide transporter 1

NCBI chr13:96,679,243...96,782,362
Ensembl chr13:96,679,126...96,776,675

Cfap276

cilia and flagella associated protein 276

PMID:32592472

NCBI chr 3:108,444,900...108,452,013
Ensembl chr 3:108,441,466...108,452,039

Cfap53

cilia and flagella associated protein 53

NCBI chr18:74,416,171...74,493,055
Ensembl chr18:74,416,161...74,493,057

Chrnd

cholinergic receptor, nicotinic, delta polypeptide

NCBI chr 1:87,118,319...87,127,792
Ensembl chr 1:87,118,329...87,127,792

Chtop

chromatin target of PRMT1

NCBI chr 3:90,405,846...90,417,400
Ensembl chr 3:90,406,263...90,416,805

Cir1

corepressor interacting with RBPJ, 1

NCBI chr 2:73,114,216...73,142,936
Ensembl chr 2:73,113,449...73,143,045

Cited1

Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 1

PMID:14673158

NCBI chr X:101,290,984...101,295,787
Ensembl chr X:101,290,987...101,295,787

Cnot4

CCR4-NOT transcription complex, subunit 4

NCBI chr 6:34,999,000...35,110,692
Ensembl chr 6:34,999,000...35,110,659

Col27a1

collagen, type XXVII, alpha 1

NCBI chr 4:63,132,246...63,253,228
Ensembl chr 4:63,132,241...63,253,228

Colgalt1

collagen beta(1-O)galactosyltransferase 1

PMID:31759980

NCBI chr 8:72,063,631...72,077,555
Ensembl chr 8:72,063,642...72,077,555

Commd10

COMM domain containing 10

NCBI chr18:47,091,886...47,221,062
Ensembl chr18:47,091,883...47,367,351

Comt

catechol-O-methyltransferase

PMID:18469803

NCBI chr16:18,225,632...18,247,006
Ensembl chr16:18,225,636...18,245,602

coenzyme Q4

NCBI chr 2:29,677,505...29,687,947
Ensembl chr 2:29,677,505...29,687,947

Cox7c

cytochrome c oxidase subunit 7C

NCBI chr13:86,192,917...86,194,914
Ensembl chr13:86,192,935...86,195,023

Crb2

crumbs family member 2

NCBI chr 2:37,666,238...37,689,115
Ensembl chr 2:37,666,261...37,689,115

Crkl

v-crk avian sarcoma virus CT10 oncogene homolog-like

PMID:12082638

NCBI chr16:17,269,849...17,305,304
Ensembl chr16:17,269,851...17,305,298

Csde1

cold shock domain containing E1, RNA binding

PMID:28386023

NCBI chr 3:102,927,347...102,965,502
Ensembl chr 3:102,927,742...102,965,502

Ctnnb1

catenin (cadherin associated protein), beta 1

PMID:12975353

NCBI chr 9:120,762,466...120,789,573
Ensembl chr 9:120,758,282...120,789,573

Cxadr

coxsackie virus and adenovirus receptor

NCBI chr16:78,098,114...78,156,673
Ensembl chr16:78,098,377...78,156,662

Ddx39a

DEAD box helicase 39a

NCBI chr 8:84,441,806...84,453,533
Ensembl chr 8:84,441,806...84,453,521

Dennd4c

DENN/MADD domain containing 4C

NCBI chr 4:86,666,761...86,768,840
Ensembl chr 4:86,666,792...86,768,840

Dhcr7

7-dehydrocholesterol reductase

NCBI chr 7:143,376,825...143,402,147
Ensembl chr 7:143,376,882...143,402,147

Dhx35

DEAH (Asp-Glu-Ala-His) box polypeptide 35

NCBI chr 2:158,636,674...158,700,141
Ensembl chr 2:158,636,727...158,700,134

Dnajc8

DnaJ heat shock protein family (Hsp40) member C8

NCBI chr 4:132,262,859...132,281,053
Ensembl chr 4:132,262,861...132,281,053

Dnmt3b

DNA methyltransferase 3B

NCBI chr 2:153,491,332...153,529,650
Ensembl chr 2:153,491,370...153,529,650

Dpm1

dolichol-phosphate (beta-D) mannosyltransferase 1

NCBI chr 2:168,050,968...168,072,299
Ensembl chr 2:168,050,968...168,072,511

Dsp

desmoplakin

NCBI chr13:38,335,270...38,382,553
Ensembl chr13:38,335,270...38,382,553

E2f7

E2F transcription factor 7

PMID:22516201

NCBI chr10:110,580,799...110,623,245
Ensembl chr10:110,581,300...110,623,245

E2f8

E2F transcription factor 8

PMID:22516201

NCBI chr 7:48,516,177...48,531,821
Ensembl chr 7:48,516,177...48,531,344

Egfr

epidermal growth factor receptor

PMID:7618085 PMID:15366372

NCBI chr11:16,700,153...16,868,158
Ensembl chr11:16,702,203...16,868,158

Egln1

egl-9 family hypoxia-inducible factor 1

PMID:16966370

NCBI chr 8:125,635,326...125,675,993
Ensembl chr 8:125,635,326...125,676,063

Emp2

epithelial membrane protein 2

PMID:28295343

NCBI chr16:10,099,613...10,131,832
Ensembl chr16:10,099,613...10,131,832

Eng

endoglin

NCBI chr 2:32,536,607...32,572,681
Ensembl chr 2:32,536,607...32,572,681

erythropoietin

NCBI chr 5:137,481,282...137,484,078
Ensembl chr 5:137,481,282...137,531,504

Epor

erythropoietin receptor

PMID:7553874

NCBI chr 9:21,870,193...21,874,915
Ensembl chr 9:21,870,193...21,874,802

Ets2 repressor factor

NCBI chr 7:24,941,985...24,950,529
Ensembl chr 7:24,941,986...24,950,186

Esrrb

estrogen related receptor, beta

PMID:9285590

NCBI chr12:86,407,891...86,568,402
Ensembl chr12:86,407,891...86,568,402

Exoc3l2

exocyst complex component 3-like 2

NCBI chr 7:19,197,212...19,230,687
Ensembl chr 7:19,197,256...19,230,687

Faf2

Fas associated factor family member 2

NCBI chr13:54,769,597...54,811,876
Ensembl chr13:54,769,597...54,811,876

Fah

fumarylacetoacetate hydrolase

NCBI chr 7:84,234,367...84,255,150
Ensembl chr 7:84,234,367...84,255,930

Fbxw8

F-box and WD-40 domain protein 8

PMID:16880526

NCBI chr 5:118,203,046...118,293,523
Ensembl chr 5:118,203,030...118,293,529

Fgfr1op2

FGFR1 oncogene partner 2

NCBI chr 6:146,479,401...146,500,696
Ensembl chr 6:146,478,701...146,500,696

Fgfr2

fibroblast growth factor receptor 2

PMID:9435295

NCBI chr 7:129,764,181...129,868,538
Ensembl chr 7:129,764,181...132,725,079

Fgg

fibrinogen gamma chain

PMID:11891199

NCBI chr 3:82,915,031...82,922,363
Ensembl chr 3:82,915,031...82,922,356

Fhip1a

FHF complex subunit HOOK interacting protein 1A

NCBI chr 3:85,567,370...85,653,516
Ensembl chr 3:85,567,368...85,724,598

Fhod3

formin homology 2 domain containing 3

NCBI chr18:24,841,445...25,266,564
Ensembl chr18:24,841,680...25,266,558

fos-like antigen 1

NCBI chr19:5,497,726...5,505,966
Ensembl chr19:5,497,575...5,505,974

Fryl

FRY like transcription coactivator

NCBI chr 5:73,177,534...73,414,042
Ensembl chr 5:73,177,330...73,413,962

Fubp1

far upstream element (FUSE) binding protein 1

PMID:26774856

NCBI chr 3:151,916,059...151,942,467
Ensembl chr 3:151,916,059...151,942,463

Fzr1

fizzy and cell division cycle 20 related 1

PMID:19160489

NCBI chr10:81,202,713...81,214,204
Ensembl chr10:81,202,056...81,214,350

gap junction protein, beta 3

NCBI chr 4:127,219,028...127,224,629
Ensembl chr 4:127,219,028...127,224,637

Gne

glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase

NCBI chr 4:44,034,075...44,084,177
Ensembl chr 4:44,034,075...44,084,177

Gpatch1

G patch domain containing 1

NCBI chr 7:34,975,969...35,017,865
Ensembl chr 7:34,975,961...35,017,865

Grhl2

grainyhead like transcription factor 2

NCBI chr15:37,233,065...37,363,813
Ensembl chr15:37,233,280...37,363,813

gene trap ROSA 26, Philippe Soriano

NCBI chr 6:113,044,389...113,054,205
Ensembl chr 6:113,044,389...113,054,294

Gtpbp3

GTP binding protein 3

NCBI chr 8:71,938,788...71,952,268
Ensembl chr 8:71,940,747...71,952,227

H13

histocompatibility 13

NCBI chr 2:152,511,292...152,550,588
Ensembl chr 2:152,511,381...152,550,590

heart and neural crest derivatives expressed 1

PMID:23911935

NCBI chr11:57,719,539...57,722,973
Ensembl chr11:57,719,531...57,723,644

Hgf

hepatocyte growth factor

PMID:7854452

NCBI chr 5:16,758,493...16,827,448
Ensembl chr 5:16,758,493...16,825,150

Hmgcl

3-hydroxy-3-methylglutaryl-Coenzyme A lyase

PMID:9817922

NCBI chr 4:135,673,745...135,689,979
Ensembl chr 4:135,673,759...135,689,928

Hmox1

heme oxygenase 1

NCBI chr 8:75,820,246...75,827,221
Ensembl chr 8:75,820,249...75,827,217

Hsd17b2

hydroxysteroid (17-beta) dehydrogenase 2

PMID:18048640

NCBI chr 8:118,427,721...118,485,769
Ensembl chr 8:118,428,643...118,485,766

integrin alpha 4

NCBI chr 2:79,084,767...79,163,458
Ensembl chr 2:79,085,770...79,163,467

integrin alpha V

NCBI chr 2:83,551,625...83,637,261
Ensembl chr 2:83,554,741...83,637,260

Itgb1

integrin beta 1 (fibronectin receptor beta)

PMID:12620989

NCBI chr 8:129,412,135...129,460,060
Ensembl chr 8:129,412,135...129,459,681

integrin beta 8

NCBI chr12:119,121,921...119,202,891
Ensembl chr12:119,121,757...119,202,537

Jun

jun proto-oncogene

NCBI chr 4:94,937,273...94,940,459
Ensembl chr 4:94,937,271...94,940,459

Kifbp

kinesin family binding protein

NCBI chr10:62,394,249...62,414,846
Ensembl chr10:62,374,405...62,414,236

keratin 19

NCBI chr11:100,031,636...100,036,752
Ensembl chr11:100,031,636...100,039,491

Krt8

keratin 8

PMID:11062258 PMID:12771125

NCBI chr15:101,905,146...101,912,777
Ensembl chr15:101,905,133...101,912,917

laminin, alpha 5

NCBI chr 2:179,818,166...179,868,092
Ensembl chr 2:179,818,166...179,867,652

Ldoc1

regulator of NFKB signaling

PMID:25468940

NCBI chr X:60,753,217...60,754,556
Ensembl chr X:60,753,103...60,754,561

LIF receptor alpha

NCBI chr15:7,120,091...7,226,970
Ensembl chr15:7,120,095...7,226,970

Lox

lysyl oxidase

NCBI chr18:52,649,132...52,662,939
Ensembl chr18:52,649,139...52,662,939

Lpar3

lysophosphatidic acid receptor 3

PMID:15875025

NCBI chr 3:145,926,716...145,991,969
Ensembl chr 3:145,926,718...145,991,941

Mab21l2

mab-21-like 2

NCBI chr 3:86,453,357...86,455,590
Ensembl chr 3:86,452,888...86,455,936

Maf

avian musculoaponeurotic fibrosarcoma oncogene homolog

NCBI chr 8:116,429,992...116,433,633
Ensembl chr 8:116,409,681...116,434,533

Map2k1

mitogen-activated protein kinase kinase 1

PMID:16887817

NCBI chr 9:64,093,051...64,160,887
Ensembl chr 9:64,093,052...64,160,913

Mapk14

mitogen-activated protein kinase 14

PMID:10973481

NCBI chr17:28,910,243...28,967,379
Ensembl chr17:28,910,303...28,967,380

Mecp2

methyl CpG binding protein 2

PMID:22375006

NCBI chr X:73,070,198...73,129,296
Ensembl chr X:73,070,198...73,178,969

mitochondrial trans-2-enoyl-CoA reductase

NCBI chr 4:131,570,755...131,595,098
Ensembl chr 4:131,570,781...131,595,097

Med23

mediator complex subunit 23

NCBI chr10:24,745,884...24,789,427
Ensembl chr10:24,745,884...24,789,579

Meox2

mesenchyme homeobox 2

PMID:20862291

NCBI chr12:37,158,539...37,229,533
Ensembl chr12:37,158,539...37,229,533

Mllt10

myeloid/lymphoid or mixed-lineage leukemia; translocated to, 10

NCBI chr 2:18,059,971...18,217,201
Ensembl chr 2:18,060,048...18,217,199

Mlst8

MTOR associated protein, LST8 homolog (S. cerevisiae)

PMID:17141160

NCBI chr17:24,692,524...24,698,722
Ensembl chr17:24,692,525...24,698,052

Mpi

mannose phosphate isomerase

PMID:16339137

NCBI chr 9:57,448,744...57,460,095
Ensembl chr 9:57,451,539...57,460,046

myosin, heavy polypeptide 9, non-muscle

PMID:20679233

NCBI chr15:77,644,785...77,726,375
Ensembl chr15:77,644,787...77,726,375

Nadk2

NAD kinase 2, mitochondrial

NCBI chr15:9,071,340...9,110,584
Ensembl chr15:9,071,340...9,110,979

Ncoa6

nuclear receptor coactivator 6

PMID:12446700 PMID:12556486

NCBI chr 2:155,232,576...155,315,831
Ensembl chr 2:155,232,576...155,315,814

Ncor2

nuclear receptor co-repressor 2

NCBI chr 5:125,094,217...125,256,302
Ensembl chr 5:125,094,217...125,256,283

Ndor1

NADPH dependent diflavin oxidoreductase 1

NCBI chr 2:25,134,825...25,145,458
Ensembl chr 2:25,134,833...25,146,034
Ensembl chr 2:25,134,833...25,146,034
Ensembl chr 2:25,134,833...25,146,034

Nek9

NIMA (never in mitosis gene a)-related expressed kinase 9

NCBI chr12:85,346,288...85,386,136
Ensembl chr12:85,346,288...85,386,136

neurofibromin 2

NCBI chr11:4,715,845...4,799,544
Ensembl chr11:4,715,845...4,799,536

Nmnat2

nicotinamide nucleotide adenylyltransferase 2

NCBI chr 1:152,830,532...152,995,012
Ensembl chr 1:152,830,744...152,995,007

Nog

noggin

NCBI chr11:89,191,464...89,193,385
Ensembl chr11:89,191,464...89,193,158

notch 2

NCBI chr 3:97,920,854...98,057,683
Ensembl chr 3:97,920,843...98,057,677

Nrbp1

nuclear receptor binding protein 1

NCBI chr 5:31,398,227...31,408,910
Ensembl chr 5:31,398,208...31,408,910

Nubpl

nucleotide binding protein-like

NCBI chr12:52,144,529...52,357,753
Ensembl chr12:52,144,520...52,359,527

Pax6

paired box 6

NCBI chr 2:105,499,241...105,528,755
Ensembl chr 2:105,499,245...105,527,709

Pdcd7

programmed cell death 7

NCBI chr 9:65,253,350...65,266,925
Ensembl chr 9:65,253,386...65,266,925

Pdzrn3

PDZ domain containing RING finger 3

NCBI chr 6:101,126,568...101,354,858
Ensembl chr 6:101,126,570...101,354,858

Pgap2

post-GPI attachment to proteins 2

NCBI chr 7:101,859,153...101,887,771
Ensembl chr 7:101,859,415...101,887,774

Pgp

phosphoglycolate phosphatase

PMID:27731369

NCBI chr17:24,689,400...24,692,084
Ensembl chr17:24,689,366...24,692,084

Pgr

progesterone receptor

NCBI chr 9:8,890,017...8,968,612
Ensembl chr 9:8,899,834...8,968,612

Pigf

phosphatidylinositol glycan anchor biosynthesis, class F

NCBI chr17:87,304,684...87,332,975
Ensembl chr17:87,304,684...87,332,834

Pigl

phosphatidylinositol glycan anchor biosynthesis, class L

NCBI chr11:62,349,267...62,406,863
Ensembl chr11:62,349,286...62,405,243

Pitrm1

pitrilysin metallepetidase 1

NCBI chr13:6,598,158...6,630,194
Ensembl chr13:6,598,185...6,630,551

Pkd1

polycystin 1, transient receptor potential channel interacting

PMID:20862291

NCBI chr17:24,767,657...24,815,488
Ensembl chr17:24,768,808...24,815,482

Porcn

porcupine O-acyltransferase

PMID:23760955

NCBI chr X:8,060,085...8,072,794
Ensembl chr X:8,060,087...8,072,764

peroxisome proliferator activated receptor gamma

PMID:10549290

NCBI chr 6:115,337,840...115,467,365
Ensembl chr 6:115,337,912...115,467,360

Prdm1

PR domain containing 1, with ZNF domain

PMID:22733990

NCBI chr10:44,313,170...44,404,548
Ensembl chr10:44,313,173...44,404,497

Prl4a1

prolactin family 4, subfamily a, member 1

PMID:15545614

NCBI chr13:28,200,195...28,207,531
Ensembl chr13:28,200,195...28,207,542

Prl7d1

prolactin family 7, subfamily d, member 1

PMID:31012985

NCBI chr13:27,892,981...27,900,720
Ensembl chr13:27,890,320...27,900,719

Prss8

protease, serine 8 (prostasin)

PMID:22952456

NCBI chr 7:127,524,889...127,529,321
Ensembl chr 7:127,524,888...127,529,276

Psph

phosphoserine phosphatase

NCBI chr 5:129,842,622...129,864,318
Ensembl chr 5:129,842,622...129,864,513

phosphatase and tensin homolog

PMID:15492213

NCBI chr19:32,734,977...32,803,560
Ensembl chr19:32,734,897...32,803,560

Pth1r

parathyroid hormone 1 receptor

NCBI chr 9:110,551,132...110,576,213
Ensembl chr 9:110,551,153...110,576,213

Rab21

RAB21, member RAS oncogene family

NCBI chr10:115,125,767...115,151,540
Ensembl chr10:115,122,989...115,151,499

Rad23b

RAD23 homolog B, nucleotide excision repair protein

PMID:11809813

NCBI chr 4:55,350,042...55,392,237
Ensembl chr 4:55,350,043...55,392,237

Raf1

v-raf-leukemia viral oncogene 1

PMID:9767153

NCBI chr 6:115,595,530...115,653,596
Ensembl chr 6:115,595,028...115,653,596

Rb1cc1

RB1-inducible coiled-coil 1

NCBI chr 1:6,284,858...6,346,599
Ensembl chr 1:6,276,421...6,346,872

Rgl1

ral guanine nucleotide dissociation stimulator,-like 1