Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

MAMMALIAN PHENOTYPE - ANNOTATIONS

The Mouse Adult Gross Anatomy Ontology and Mammalian Phenotype Ontology are downloaded weekly from the Mouse Genome Informatics databases at Jackson Laboratories (ftp://ftp.informatics.jax.org/pub/reports/index.html). For more information about these ontologies, see the MGI Publications Page at http://www.informatics.jax.org/mgihome/other/publications.shtml.
Term:abnormal cornea morphology
go back to main search page
Accession:MP:0001312 term browser browse the term
Definition:any structural anomaly of the transparent anterior portion of the fibrous coat of the eye that covers the iris, pupil, and anterior chamber; together with the lens, the cornea refracts light
Synonyms:exact_synonym: abnormal corneal morphology;   abnormal tarsal conjunctiva morphology;   abnormal tunica cornea morphology;   cornea abnormalities
 narrow_synonym: Microcornea;   corneal dysplasia
 broad_synonym: abnormal cornea of camera-type eye morphology
 xref: HP:0000482


show annotations for term's descendants           Sort by:
cornea deposits term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctns cystinosin, lysosomal cystine transporter IMP RGD PMID:35695380 RGD:155630629 NCBI chr10:57,801,551...57,817,213
Ensembl chr10:57,801,456...57,817,120 		JBrowse link
cornea opacity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gla galactosidase, alpha severity IMP compared to wild type RGD PMID:31253878 RGD:401976417 NCBI chr  X:97,769,227...97,780,646
Ensembl chr  X:97,768,996...97,780,664 		JBrowse link
G Glaem2Mcwi galactosidase, alpha; CRISPR/Cas9 system induced mutant 2, Medical College of Wisconsin severity IMP compared to wild type RGD PMID:31253878 RGD:401976417
Term paths to the root
Path 1
Term Annotations click to browse term
  mammalian phenotype 5417
    vision/eye phenotype 100
      abnormal eye morphology 88
        abnormal anterior eye segment morphology 32
          abnormal cornea morphology 6
            abnormal Bowman membrane morphology 0
            abnormal Descemet membrane morphology + 0
            abnormal cornea endothelium morphology + 0
            abnormal cornea epithelium morphology + 0
            abnormal cornea size + 0
            abnormal cornea stroma morphology + 0
            absent cornea 0
            anterior iris synechia 0
            cornea abrasion 0
            cornea astigmatism 0
            cornea degeneration + 0
            cornea deposits 1
            cornea opacity + 5
            cornea perforation 0
            cornea scarring 0
            cornea ulcer 0
            cornea vascularization 0
            corneal-lenticular stalk 0
            fused cornea and lens 0
paths to the root