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MAMMALIAN PHENOTYPE - ANNOTATIONS

The Mouse Adult Gross Anatomy Ontology and Mammalian Phenotype Ontology are downloaded weekly from the Mouse Genome Informatics databases at Jackson Laboratories (ftp://ftp.informatics.jax.org/pub/reports/index.html). For more information about these ontologies, see the MGI Publications Page at http://www.informatics.jax.org/mgihome/other/publications.shtml.
Term:abnormal trochlear nerve morphology
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Accession:MP:0001063 term browser browse the term
Definition:any structural anomaly of the fourth cranial nerve, which normally carries the motor innervation of the superior oblique muscles of the eye
Synonyms:exact_synonym: abnormal CN-IV morphology;   trochlear nerve abnormalities
 narrow_synonym: trochlear nerve dysplasia


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abnormal trochlear nerve morphology term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G En1 engrailed 1 IAGP MGI PMID:12682014 NCBI chr 1:120,530,246...120,535,719
Ensembl chr 1:120,530,147...120,535,721 		JBrowse link
G Fgfr1 fibroblast growth factor receptor 1 IAGP MGI PMID:12682014 NCBI chr 8:26,008,808...26,067,819
Ensembl chr 8:26,003,670...26,065,734 		JBrowse link
G Nr6a1 nuclear receptor subfamily 6, group A, member 1 IAGP MGI PMID:16530751 NCBI chr 2:38,613,381...38,816,464
Ensembl chr 2:38,613,382...38,817,700 		JBrowse link
G Otx1 orthodenticle homeobox 1 IAGP MGI PMID:9077465 NCBI chr11:21,944,764...21,954,044
Ensembl chr11:21,944,764...21,952,897 		JBrowse link
G Otx2 orthodenticle homeobox 2 IAGP MGI PMID:7590242 PMID:9077465 NCBI chr14:48,894,238...48,905,101
Ensembl chr14:48,895,134...48,911,276 		JBrowse link
G Pax3 paired box 3 IAGP MGI PMID:31241461 NCBI chr 1:78,077,904...78,173,773
Ensembl chr 1:78,077,904...78,173,771 		JBrowse link
G Phox2a paired-like homeobox 2a IAGP MGI PMID:16319924 NCBI chr 7:101,467,520...101,471,933
Ensembl chr 7:101,467,520...101,471,933 		JBrowse link
G Plxna3 plexin A3 IAGP MGI PMID:15721238 NCBI chr  X:73,372,644...73,388,295
Ensembl chr  X:73,372,672...73,388,295 		JBrowse link
G Plxna4 plexin A4 IAGP MGI PMID:15721238 NCBI chr 6:32,121,478...32,565,127
Ensembl chr 6:32,121,203...32,565,127 		JBrowse link
G Rbfox2 RNA binding protein, fox-1 homolog (C. elegans) 2 IAGP MGI PMID:31241461 NCBI chr15:76,963,190...77,193,058
Ensembl chr15:76,963,190...77,191,204 		JBrowse link
G Tubb3 tubulin, beta 3 class III IAGP MGI PMID:20074521 NCBI chr 8:124,138,292...124,148,754
Ensembl chr 8:124,138,163...124,148,754 		JBrowse link
G Unc5c unc-5 netrin receptor C IAGP MGI PMID:16723533 NCBI chr 3:141,171,360...141,540,685
Ensembl chr 3:141,170,977...141,540,685 		JBrowse link
absent trochlear nerve term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G En1 engrailed 1 IAGP MGI PMID:7925010 NCBI chr 1:120,530,246...120,535,719
Ensembl chr 1:120,530,147...120,535,721 		JBrowse link
G Hes1 hes family bHLH transcription factor 1 IAGP MGI PMID:11500373 NCBI chr16:29,883,259...29,886,614
Ensembl chr16:29,883,202...29,886,614 		JBrowse link
G Hes3 hes family bHLH transcription factor 3 IAGP MGI PMID:11500373 NCBI chr 4:152,369,707...152,376,133
Ensembl chr 4:152,370,429...152,376,119 		JBrowse link
G Nrp2 neuropilin 2 IAGP MGI PMID:10707971 NCBI chr 1:62,742,476...62,857,851
Ensembl chr 1:62,742,444...62,857,854 		JBrowse link
G Psph phosphoserine phosphatase IEA MGI NCBI chr 5:129,842,622...129,864,318
Ensembl chr 5:129,842,622...129,864,513 		JBrowse link
G Sema3f sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F IAGP MGI PMID:12890759 NCBI chr 9:107,558,698...107,587,674
Ensembl chr 9:107,558,699...107,587,674 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  mammalian phenotype 17094
    nervous system phenotype 4654
      abnormal nervous system morphology 3677
        abnormal somatic nervous system morphology 1269
          abnormal cranial nerve morphology 386
            abnormal trochlear nerve morphology 17
              absent trochlear nerve 6
paths to the root