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MAMMALIAN PHENOTYPE - ANNOTATIONS

The Mouse Adult Gross Anatomy Ontology and Mammalian Phenotype Ontology are downloaded weekly from the Mouse Genome Informatics databases at Jackson Laboratories (ftp://ftp.informatics.jax.org/pub/reports/index.html). For more information about these ontologies, see the MGI Publications Page at http://www.informatics.jax.org/mgihome/other/publications.shtml.
Term:abnormal brain development
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Accession:MP:0000913 term browser browse the term
Definition:aberrant or incomplete differentiation of the brain
Synonyms:exact_synonym: brain development abnormalities
 broad_synonym: Abnormality of brain morphology
 alt_id: MP:0001888
 xref: GO:0007420;   HP:0012443


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abnormal brain development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Csf1r colony stimulating factor 1 receptor IMP RGD PMID:33450391 RGD:126781687 NCBI chr18:56,834,152...56,860,804
Ensembl chr18:56,817,049...56,860,806 		JBrowse link
G Csf1rtm(EGFP)Tset colony stimulating factor 1 receptor; target mutant, Tset IMP RGD PMID:33450391 RGD:126781687
G Dcx doublecortin IMP RGD PMID:14625554 RGD:1304461 NCBI chr  X:112,227,455...112,370,291
Ensembl chr  X:112,227,455...112,304,161 		JBrowse link
abnormal forebrain development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eml1 EMAP like 1 IAGP RGD PMID:9236234 RGD:597538480 NCBI chr 6:133,048,271...133,221,642
Ensembl chr 6:133,048,427...133,221,642 		JBrowse link
G Eml1tish EMAP like 1, tish mutant IAGP RGD PMID:9236234 RGD:597538480
hydrocephaly term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccdc39 coiled-coil domain 39 molecular ruler complex subunit IMP RGD PMID:31771992 RGD:150521527 NCBI chr 2:118,593,881...118,631,584
Ensembl chr 2:118,593,881...118,631,647 		JBrowse link
G Ccdc39em1Jgn coiled-coil domain containing 39; CRISPR/Cas9 induced mutant 1, Jgn IMP RGD PMID:31771992 RGD:150521527
Term paths to the root
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Term Annotations click to browse term
  mammalian phenotype 5440
    nervous system phenotype 386
      abnormal nervous system morphology 222
        abnormal nervous system development 24
          abnormal brain development 20
            abnormal cervical flexure morphology 0
            abnormal embryonic neuroepithelial layer differentiation 0
            abnormal forebrain development + 4
            abnormal hindbrain development + 0
            abnormal midbrain development + 0
            abnormal midbrain-hindbrain boundary morphology + 0
            abnormal olfactory bulb development + 0
            abnormal oligodendrocyte progenitor morphology + 0
            abnormal primordial meninx morphology 0
            abnormal rhombic lip morphology + 0
            delayed brain development 0
            holoprosencephaly + 0
            hydrocephaly + 12
paths to the root