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MAMMALIAN PHENOTYPE - ANNOTATIONS

The Mouse Adult Gross Anatomy Ontology and Mammalian Phenotype Ontology are downloaded weekly from the Mouse Genome Informatics databases at Jackson Laboratories (ftp://ftp.informatics.jax.org/pub/reports/index.html). For more information about these ontologies, see the MGI Publications Page at http://www.informatics.jax.org/mgihome/other/publications.shtml.
Term:abnormal colon morphology
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Accession:MP:0000495 term browser browse the term
Definition:any structural anomaly of the portion of the large intestine between the cecum and the rectum
Synonyms:exact_synonym: colon abnormalities
 narrow_synonym: Malrotation of colon;   colon dysplasia
 xref: HP:0004785


show annotations for term's descendants           Sort by:
aganglionic megacolon term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ednrb endothelin receptor type B IAGP RGD PMID:21915282 PMID:22132166 RGD:6480217, RGD:6480215 NCBI chr15:87,055,490...87,086,765
Ensembl chr15:87,057,691...87,086,765 		JBrowse link
G Ednrbsl endothelin receptor type B, spotting lethal IAGP RGD PMID:21915282 PMID:22132166 RGD:6480217, RGD:6480215
colon polyps term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apc APC regulator of WNT signaling pathway IMP RGD PMID:17360473 RGD:1601201 NCBI chr18:26,138,382...26,196,021
Ensembl chr18:26,102,679...26,197,022 		JBrowse link
G ApcPirc APC, WNT signaling pathway regulator; polyposis in the rat colon IMP RGD PMID:17360473 RGD:1601201
decreased colon length term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Themis thymocyte selection associated IAGP DNA:frameshift mutation: RGD PMID:22275874 RGD:38599149 NCBI chr 1:18,251,136...18,483,851
Ensembl chr 1:18,272,056...18,483,502 		JBrowse link
G Themism1Adej thymocyte selection associated; mutant1, Adej IAGP compared to BN RGD PMID:22275874 RGD:38599149
increased colon adenoma incidence term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apc APC regulator of WNT signaling pathway IMP compared to treated females, mock treated males RGD PMID:17360473 RGD:1601201 NCBI chr18:26,138,382...26,196,021
Ensembl chr18:26,102,679...26,197,022 		JBrowse link
G ApcPirc APC, WNT signaling pathway regulator; polyposis in the rat colon IMP compared to treated females, mock treated males RGD PMID:17360473 RGD:1601201
Term paths to the root
Path 1
Term Annotations click to browse term
  mammalian phenotype 5432
    digestive/alimentary phenotype 81
      abnormal digestive system morphology 59
        abnormal intestine morphology 32
          abnormal large intestine morphology 26
            abnormal colon morphology 26
              abnormal colon goblet cell morphology + 0
              absent colon 0
              colon atresia 0
              colon polyps 3
              colonic necrosis 0
              decreased colon length 3
              decreased colon tumor incidence 0
              gastrocolic fistula 0
              increased colon length 0
              increased colon tumor incidence + 15
              megacolon + 8
              microcolon 0
paths to the root