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MAMMALIAN PHENOTYPE - ANNOTATIONS

The Mouse Adult Gross Anatomy Ontology and Mammalian Phenotype Ontology are downloaded weekly from the Mouse Genome Informatics databases at Jackson Laboratories (ftp://ftp.informatics.jax.org/pub/reports/index.html). For more information about these ontologies, see the MGI Publications Page at http://www.informatics.jax.org/mgihome/other/publications.shtml.

Term:abnormal circulating HDL cholesterol level
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Accession:MP:0000184 term browser browse the term
Definition:any anomaly in the amount in the blood of the small lipoprotein:cholesterol complex that transports cholesterol out of the arteries and to the liver for reprocessing or excretion
Synonyms:exact_synonym: abnormal HDL cholesterol level;   abnormal HDL levels
 alt_id: MP:0001555



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decreased circulating HDL cholesterol level term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoe apolipoprotein E IMP RGD PMID:30796231 RGD:150521536 NCBI chr 1:79,353,924...79,357,852
Ensembl chr 1:79,353,916...79,357,932
JBrowse link
G Atp7b ATPase copper transporting beta IAGP RGD PMID:17303181 RGD:2292672 NCBI chr16:69,952,286...70,024,404
Ensembl chr16:69,951,778...70,023,636
JBrowse link
G Atp7bhts ATPase copper transporting beta; hepatitis IAGP RGD PMID:17303181 RGD:2292672
G Gja8 gap junction protein, alpha 8 IAGP RGD PMID:27871290 RGD:150429989 NCBI chr 2:184,490,840...184,492,456
Ensembl chr 2:184,490,840...184,492,456
JBrowse link
G Gja8m1Cub gap junction protein, alpha 8; mutant 1 Cub IAGP RGD PMID:27871290 RGD:150429989
increased circulating HDL cholesterol level term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lep leptin IMP RGD PMID:22948215 RGD:12904911 NCBI chr 4:57,661,127...57,675,262
Ensembl chr 4:57,661,131...57,675,262
JBrowse link
G Lepem1Sage leptin; zinc finger nuclease induced mutant1, Sage IMP RGD PMID:22948215 RGD:12904911
G Lepr leptin receptor IMP RGD PMID:26537785 RGD:12911216 NCBI chr 5:116,294,409...116,477,904
Ensembl chr 5:116,289,823...116,475,908
JBrowse link
G Leprem4Lizh leptin receptor; CRISPR/Cas9 induced mutant 4, Lizh IMP compared to wild type littermate RGD PMID:26537785 RGD:12911216

Term paths to the root
Path 1
Term Annotations click to browse term
  mammalian phenotype 5400
    homeostasis/metabolism phenotype 1415
      abnormal homeostasis 1316
        abnormal blood homeostasis 754
          abnormal circulating lipoprotein level 50
            abnormal circulating HDL cholesterol level 34
              decreased circulating HDL cholesterol level 15
              increased circulating HDL cholesterol level 20
Path 2
Term Annotations click to browse term
  mammalian phenotype 5400
    homeostasis/metabolism phenotype 1415
      abnormal homeostasis 1316
        abnormal lipid homeostasis 358
          abnormal lipid level 353
            abnormal sterol level 189
              abnormal cholesterol level 188
                abnormal circulating cholesterol level 164
                  abnormal circulating HDL cholesterol level 34
                    decreased circulating HDL cholesterol level 15
                    increased circulating HDL cholesterol level 20
paths to the root