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MAMMALIAN PHENOTYPE - ANNOTATIONS

The Mouse Adult Gross Anatomy Ontology and Mammalian Phenotype Ontology are downloaded weekly from the Mouse Genome Informatics databases at Jackson Laboratories (ftp://ftp.informatics.jax.org/pub/reports/index.html). For more information about these ontologies, see the MGI Publications Page at http://www.informatics.jax.org/mgihome/other/publications.shtml.

Term:abnormal trabecular bone morphology
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Accession:MP:0000130 term browser browse the term
Definition:any structural anomaly of bone that has a lattice-like or spongy structure; it is highly vascular and contains intercommunicating spaces filled with bone marrow
Synonyms:exact_synonym: abnormal cancellous bone morphology;   abnormal spongy bone morphology;   abnormal spongy spongiosa morphology;   abnormal spongy substance morphology;   abnormal substantia trabecularis morphology



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abnormal trabecular bone morphology term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb4 ATP-binding cassette, sub-family B member 4 IAGP MGI PMID:23545228 NCBI chr 5:8,943,614...9,009,226
Ensembl chr 5:8,943,717...9,009,231
JBrowse link
G Acan aggrecan IEA MGI NCBI chr 7:78,702,974...78,764,847
Ensembl chr 7:78,703,231...78,764,847
JBrowse link
G Acp5 acid phosphatase 5, tartrate resistant IAGP MGI PMID:8898228 NCBI chr 9:22,038,023...22,047,042
Ensembl chr 9:22,038,023...22,047,007
JBrowse link
G Adamtsl2 ADAMTS-like 2 IAGP MGI PMID:5713631 NCBI chr 2:26,969,348...26,998,993
Ensembl chr 2:26,969,391...26,998,993
JBrowse link
G Akr1a1 aldo-keto reductase family 1, member A1 IAGP MGI PMID:20410296 NCBI chr 4:116,493,707...116,508,871
Ensembl chr 4:116,493,707...116,508,877
JBrowse link
G Aktip AKT interacting protein IAGP MGI PMID:29635765 NCBI chr 8:91,834,267...91,862,122
Ensembl chr 8:91,838,412...91,926,604
JBrowse link
G Amer1 APC membrane recruitment 1 IAGP MGI PMID:21571217 NCBI chr  X:94,463,919...94,488,446
Ensembl chr  X:94,463,924...94,488,478
JBrowse link
G Ano5 anoctamin 5 IAGP MGI PMID:30712070 NCBI chr 7:51,160,668...51,248,459
Ensembl chr 7:51,160,777...51,248,457
JBrowse link
G Ano6 anoctamin 6 IAGP MGI PMID:22936354 NCBI chr15:95,688,724...95,873,353
Ensembl chr15:95,688,724...95,872,632
JBrowse link
G Apoe apolipoprotein E IAGP MGI PMID:17259598 NCBI chr 7:19,430,169...19,434,326
Ensembl chr 7:19,430,034...19,433,113
JBrowse link
G Ar androgen receptor IAGP MGI PMID:12370412 NCBI chr  X:97,192,363...97,366,824
Ensembl chr  X:97,192,375...97,366,821
JBrowse link
G Atr ataxia telangiectasia and Rad3 related IAGP MGI PMID:18371340 NCBI chr 9:95,739,655...95,834,813
Ensembl chr 9:95,739,650...95,833,834
JBrowse link
G Bgn biglycan IAGP MGI PMID:9731537 NCBI chr  X:72,527,207...72,539,542
Ensembl chr  X:72,527,208...72,539,539
JBrowse link
G Bmp2 bone morphogenetic protein 2 IAGP MGI PMID:23843612 NCBI chr 2:133,394,079...133,404,816
Ensembl chr 2:133,394,079...133,404,805
JBrowse link
G Brca1 breast cancer 1, early onset IAGP MGI PMID:12533509 NCBI chr11:101,379,587...101,442,808
Ensembl chr11:101,379,590...101,442,781
JBrowse link
G Calca calcitonin/calcitonin-related polypeptide, alpha IAGP MGI PMID:12488435 NCBI chr 7:114,225,223...114,236,145
Ensembl chr 7:114,230,713...114,235,592
JBrowse link
G Casr calcium-sensing receptor IAGP MGI PMID:18765830 NCBI chr16:36,310,947...36,382,605
Ensembl chr16:36,314,058...36,382,503
JBrowse link
G Cav1 caveolin 1, caveolae protein IAGP MGI PMID:16995819 NCBI chr 6:17,306,387...17,341,323
Ensembl chr 6:17,306,334...17,341,451
JBrowse link
G Ccn2 cellular communication network factor 2 IAGP MGI PMID:20534727 NCBI chr10:24,471,340...24,474,581
Ensembl chr10:24,471,340...24,474,581
JBrowse link
G Ccr2 C-C motif chemokine receptor 2 IAGP MGI PMID:19330010 NCBI chr 9:123,901,954...123,913,594
Ensembl chr 9:123,901,987...123,913,594
JBrowse link
G Cd68 CD68 antigen IAGP MGI PMID:21991369 NCBI chr11:69,555,039...69,556,996
Ensembl chr11:69,555,039...69,556,979
JBrowse link
G Cdc25a cell division cycle 25A IEA MGI NCBI chr 9:109,704,545...109,722,963
Ensembl chr 9:109,704,647...109,722,963
JBrowse link
G Chad chondroadherin IAGP MGI PMID:23755099 NCBI chr11:94,455,873...94,459,953
Ensembl chr11:94,455,873...94,459,953
JBrowse link
G Chd7 chromodomain helicase DNA binding protein 7 IAGP MGI PMID:35418650 NCBI chr 4:8,690,345...8,868,449
Ensembl chr 4:8,690,406...8,867,659
JBrowse link
G Ciita class II transactivator IAGP MGI PMID:24038328 NCBI chr16:10,297,877...10,348,928
Ensembl chr16:10,297,923...10,346,282
JBrowse link
G Clcn7 chloride channel, voltage-sensitive 7 IAGP MGI PMID:20430974 PMID:24185277 NCBI chr17:25,352,353...25,381,077
Ensembl chr17:25,352,365...25,381,078
JBrowse link
G Cldn18 claudin 18 IAGP MGI PMID:23299504 NCBI chr 9:99,572,849...99,599,320
Ensembl chr 9:99,571,514...99,599,320
JBrowse link
G Clec2d C-type lectin domain family 2, member d IAGP MGI PMID:18782774 NCBI chr 6:129,157,578...129,163,498
Ensembl chr 6:129,157,578...129,163,497
JBrowse link
G Cnot3 CCR4-NOT transcription complex, subunit 3 IAGP MGI PMID:24550297 NCBI chr 7:3,646,717...3,664,108
Ensembl chr 7:3,648,267...3,664,108
JBrowse link
G Col10a1 collagen, type X, alpha 1 IAGP MGI PMID:9015315 PMID:10811836 NCBI chr10:34,265,977...34,273,081
Ensembl chr10:34,265,977...34,273,081
JBrowse link
G Col11a1 collagen, type XI, alpha 1 IAGP MGI PMID:4100752 NCBI chr 3:113,823,933...114,014,405
Ensembl chr 3:113,824,189...114,014,367
JBrowse link
G Col2a1 collagen, type II, alpha 1 IAGP MGI PMID:11680679 PMID:22028304 PMID:24475193 NCBI chr15:97,873,483...97,902,525
Ensembl chr15:97,873,483...97,902,576
JBrowse link
G Crtap cartilage associated protein IAGP MGI PMID:17055431 NCBI chr 9:114,204,204...114,219,743
Ensembl chr 9:114,204,202...114,219,743
JBrowse link
G Csf1 colony stimulating factor 1 (macrophage) IAGP MGI PMID:1262696 PMID:21958845 NCBI chr 3:107,648,364...107,668,048
Ensembl chr 3:107,648,364...107,667,785
JBrowse link
G Csf1r colony stimulating factor 1 receptor IAGP MGI PMID:11756160 NCBI chr18:61,238,644...61,264,211
Ensembl chr18:61,233,670...61,265,221
JBrowse link
G Ctnnb1 catenin beta 1 IAGP MGI PMID:16854976 PMID:16951686 PMID:21876000 NCBI chr 9:120,762,466...120,789,573
Ensembl chr 9:120,758,282...120,789,573
JBrowse link
G Ctsk cathepsin K IAGP MGI PMID:9811821 PMID:15664014 PMID:16753017 PMID:23341620 NCBI chr 3:95,406,521...95,416,698
Ensembl chr 3:95,406,567...95,416,673
JBrowse link
G Ctsl cathepsin L IAGP MGI PMID:15154914 NCBI chr13:64,509,704...64,518,586
Ensembl chr13:64,507,151...64,518,704
JBrowse link
G Cyp19a1 cytochrome P450, family 19, subfamily a, polypeptide 1 IAGP MGI PMID:11162635 NCBI chr 9:54,073,221...54,175,448
Ensembl chr 9:54,073,221...54,175,394
JBrowse link
G Dll3 delta like canonical Notch ligand 3 IEA MGI NCBI chr 7:27,992,980...28,001,210
Ensembl chr 7:27,992,978...28,001,663
JBrowse link
G Ebf1 early B cell factor 1 IAGP MGI PMID:19130908 NCBI chr11:44,502,738...44,898,923
Ensembl chr11:44,508,144...44,898,918
JBrowse link
G Ebf2 early B cell factor 2 IAGP MGI PMID:16326388 NCBI chr14:67,470,741...67,668,401
Ensembl chr14:67,470,741...67,668,367
JBrowse link
G Egr1 early growth response 1 IAGP MGI PMID:10792003 NCBI chr18:34,994,260...34,998,009
Ensembl chr18:34,992,876...34,998,037
JBrowse link
G Enam enamelin IAGP MGI PMID:22813216 NCBI chr 5:88,635,834...88,653,908
Ensembl chr 5:88,635,834...88,653,908
JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 IAGP MGI PMID:12817751 NCBI chr10:24,513,812...24,588,057
Ensembl chr10:24,513,812...24,588,057
JBrowse link
G Esr1 estrogen receptor 1 (alpha) IAGP MGI PMID:20053716 NCBI chr10:4,561,989...4,955,633
Ensembl chr10:4,561,593...4,955,614
JBrowse link
G Esrra estrogen related receptor, alpha IAGP MGI PMID:20519122 PMID:23359549 NCBI chr19:6,888,345...6,899,182
Ensembl chr19:6,888,345...6,899,208
JBrowse link
G Fam20c FAM20C, golgi associated secretory pathway kinase IAGP MGI PMID:22732358 NCBI chr 5:138,740,836...138,795,818
Ensembl chr 5:138,740,269...138,795,832
JBrowse link
G Fas Fas cell surface death receptor IAGP MGI PMID:17259598 NCBI chr19:34,267,926...34,305,175
Ensembl chr19:34,268,066...34,305,172
JBrowse link
G Fblim1 filamin binding LIM protein 1 IAGP MGI PMID:22556421 NCBI chr 4:141,303,373...141,333,351
Ensembl chr 4:141,303,373...141,333,407
JBrowse link
G Fbn1 fibrillin 1 IAGP MGI PMID:22374917 NCBI chr 2:125,142,514...125,348,417
Ensembl chr 2:125,142,514...125,349,913
JBrowse link
G Fcer1g Fc receptor, IgE, high affinity I, gamma polypeptide IAGP MGI PMID:15073337 NCBI chr 1:171,057,141...171,061,918
Ensembl chr 1:171,057,141...171,061,934
JBrowse link
G Fgf23 fibroblast growth factor 23 IAGP MGI PMID:16449303 NCBI chr 6:127,049,865...127,059,257
Ensembl chr 6:127,049,865...127,058,371
JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 IAGP MGI PMID:18242159 PMID:21538817 NCBI chr 7:129,764,181...129,868,538
Ensembl chr 7:129,764,181...132,725,079
JBrowse link
G Fgfr3 fibroblast growth factor receptor 3 IAGP MGI PMID:10587515 PMID:17360456 PMID:22367969 PMID:25852647 PMID:37345656 NCBI chr 5:33,879,068...33,894,412
Ensembl chr 5:33,879,018...33,894,412
JBrowse link
G Fig4 FIG4 phosphoinositide 5-phosphatase IAGP MGI PMID:23623387 NCBI chr10:41,064,168...41,179,237
Ensembl chr10:41,064,168...41,179,256
JBrowse link
G Foxn1 forkhead box N1 IAGP MGI PMID:17202317 NCBI chr11:78,248,403...78,277,597
Ensembl chr11:78,248,403...78,277,384
JBrowse link
G Gas5 growth arrest specific 5 IAGP MGI PMID:33006314 NCBI chr 1:160,862,171...160,866,109
Ensembl chr 1:160,861,992...160,866,116
JBrowse link
G Gba1 glucosylceramidase beta 1 IAGP MGI PMID:20962279 NCBI chr 3:89,110,235...89,119,944
Ensembl chr 3:89,110,235...89,116,273
JBrowse link
G Gcm2 glial cells missing homolog 2 IAGP MGI PMID:10910362 NCBI chr13:41,254,903...41,264,511
Ensembl chr13:41,254,903...41,264,511
JBrowse link
G Ghr growth hormone receptor IAGP MGI PMID:11133160 NCBI chr15:3,347,237...3,612,834
Ensembl chr15:3,347,242...3,612,974
JBrowse link
G Gja1 gap junction protein, alpha 1 IAGP MGI PMID:18003637 NCBI chr10:56,253,297...56,266,519
Ensembl chr10:56,253,426...56,278,609
JBrowse link
G Gpr55 G protein-coupled receptor 55 IAGP MGI PMID:19805329 NCBI chr 1:85,860,927...85,924,781
Ensembl chr 1:85,866,039...85,888,729
JBrowse link
G Gt(ROSA)26Sor gene trap ROSA 26, Philippe Soriano IAGP MGI PMID:20010698 PMID:20499347 NCBI chr 6:113,044,389...113,054,205
Ensembl chr 6:113,043,843...113,054,294
JBrowse link
G Gulo gulonolactone (L-) oxidase IEA MGI NCBI chr14:66,224,235...66,246,703
Ensembl chr14:66,224,235...66,246,656
JBrowse link
G Hck hemopoietic cell kinase IAGP MGI PMID:8634424 NCBI chr 2:152,950,388...152,993,361
Ensembl chr 2:152,950,388...152,993,361
JBrowse link
G Hcst hematopoietic cell signal transducer IAGP MGI PMID:19251634 NCBI chr 7:30,117,137...30,119,279
Ensembl chr 7:30,117,137...30,119,279
JBrowse link
G Hexa hexosaminidase A IAGP MGI PMID:9184660 NCBI chr 9:59,446,966...59,472,392
Ensembl chr 9:59,446,823...59,472,392
JBrowse link
G Hexb hexosaminidase B IAGP MGI PMID:9184660 NCBI chr13:97,312,839...97,334,865
Ensembl chr13:97,312,839...97,334,865
JBrowse link
G Hfe homeostatic iron regulator IAGP MGI PMID:20976594 NCBI chr13:23,886,017...23,894,837
Ensembl chr13:23,886,017...23,894,837
JBrowse link
G Hivep3 human immunodeficiency virus type I enhancer binding protein 3 IAGP MGI PMID:22573816 NCBI chr 4:119,590,982...119,992,608
Ensembl chr 4:119,590,981...119,995,242
JBrowse link
G Hspg2 perlecan (heparan sulfate proteoglycan 2) IAGP MGI PMID:17213231 NCBI chr 4:137,196,062...137,297,941
Ensembl chr 4:137,196,080...137,297,941
JBrowse link
G Iapp islet amyloid polypeptide IAGP MGI PMID:14970190 NCBI chr 6:142,244,151...142,249,546
Ensembl chr 6:142,244,149...142,249,687
JBrowse link
G Ibsp integrin binding sialoprotein IAGP MGI PMID:18458111 NCBI chr 5:104,447,153...104,459,338
Ensembl chr 5:104,447,037...104,459,335
JBrowse link
G Idh2 isocitrate dehydrogenase 2 (NADP+), mitochondrial IAGP MGI PMID:29527922 NCBI chr 7:79,744,594...79,768,356
Ensembl chr 7:79,744,594...79,765,140
JBrowse link
G Ifitm5 interferon induced transmembrane protein 5 IAGP MGI PMID:28880886 PMID:29174564 NCBI chr 7:140,528,871...140,530,156
Ensembl chr 7:140,528,871...140,530,204
JBrowse link
G Igf1 insulin-like growth factor 1 IAGP MGI PMID:11133160 NCBI chr10:87,694,127...87,772,909
Ensembl chr10:87,694,127...87,772,904
JBrowse link
G Igf1r insulin-like growth factor I receptor IAGP MGI PMID:12215457 NCBI chr 7:67,601,486...67,883,416
Ensembl chr 7:67,602,575...67,883,416
JBrowse link
G Ighm immunoglobulin heavy constant mu IAGP MGI PMID:17202317 NCBI chr12:113,382,446...113,386,350
Ensembl chr12:113,382,178...113,386,350
JBrowse link
G Ihh Indian hedgehog IAGP MGI PMID:10465785 PMID:16278811 NCBI chr 1:74,984,474...74,990,831
Ensembl chr 1:74,984,474...74,990,831
JBrowse link
G Il10 interleukin 10 IAGP MGI PMID:15362035 NCBI chr 1:130,947,459...130,952,707
Ensembl chr 1:130,947,582...130,952,711
JBrowse link
G Il6 interleukin 6 IAGP MGI PMID:8131749 PMID:11018077 NCBI chr 5:30,218,112...30,224,973
Ensembl chr 5:30,218,112...30,224,979
JBrowse link
G Il6st interleukin 6 signal transducer IAGP MGI PMID:14617570 PMID:14755335 NCBI chr13:112,600,604...112,643,394
Ensembl chr13:112,600,604...112,646,620
JBrowse link
G Inpp4b inositol polyphosphate-4-phosphatase, type II IAGP MGI PMID:21982707 NCBI chr 8:82,068,895...82,865,553
Ensembl chr 8:82,069,185...82,854,543
JBrowse link
G Inpp5d inositol polyphosphate-5-phosphatase D IAGP MGI PMID:12161749 NCBI chr 1:87,548,034...87,648,232
Ensembl chr 1:87,548,034...87,648,229
JBrowse link
G Irak3 interleukin-1 receptor-associated kinase 3 IAGP MGI PMID:15809356 NCBI chr10:119,977,553...120,038,035
Ensembl chr10:119,977,553...120,038,035
JBrowse link
G Irs1 insulin receptor substrate 1 IAGP MGI PMID:10749573 NCBI chr 1:82,210,826...82,269,160
Ensembl chr 1:82,210,822...82,269,137
JBrowse link
G Jdp2 Jun dimerization protein 2 IAGP MGI PMID:23200825 NCBI chr12:85,645,190...85,686,652
Ensembl chr12:85,645,801...85,686,652
JBrowse link
G Junb jun B proto-oncogene IAGP MGI PMID:14769860 NCBI chr 8:85,703,538...85,705,377
Ensembl chr 8:85,701,113...85,705,347
JBrowse link
G Kl klotho IAGP MGI PMID:10430604 NCBI chr 5:150,876,072...150,917,282
Ensembl chr 5:150,876,072...150,917,282
JBrowse link
G Klf10 Kruppel-like transcription factor 10 IAGP MGI PMID:16876494 NCBI chr15:38,291,702...38,300,950
Ensembl chr15:38,291,707...38,300,950
JBrowse link
G Lbr lamin B receptor IAGP MGI PMID:17403717 NCBI chr 1:181,642,880...181,669,933
Ensembl chr 1:181,642,900...181,670,611
JBrowse link
G Lmna lamin A IAGP MGI PMID:12748643 NCBI chr 3:88,388,455...88,413,842
Ensembl chr 3:88,387,454...88,417,263
JBrowse link
G Lrp5 low density lipoprotein receptor-related protein 5 IAGP MGI PMID:11956231 PMID:15537447 PMID:16293698 PMID:17147489 PMID:21924256 NCBI chr19:3,634,825...3,736,574
Ensembl chr19:3,634,828...3,736,564
JBrowse link
G Lrp6 low density lipoprotein receptor-related protein 6 IAGP MGI PMID:21924256 NCBI chr 6:134,423,439...134,543,876
Ensembl chr 6:134,423,439...134,543,928
JBrowse link
G Lrrk1 leucine-rich repeat kinase 1 IAGP MGI PMID:23526378 NCBI chr 7:65,908,493...66,038,089
Ensembl chr 7:65,876,660...66,038,098
JBrowse link
G Ltbp3 latent transforming growth factor beta binding protein 3 IAGP MGI PMID:12379497 NCBI chr19:5,790,928...5,808,564
Ensembl chr19:5,790,932...5,808,560
JBrowse link
G Lyz2 lysozyme 2 IAGP MGI PMID:14769860 PMID:20053716 NCBI chr10:117,113,446...117,118,177
Ensembl chr10:117,113,236...117,118,226
JBrowse link
G Mbtps2 membrane-bound transcription factor peptidase, site 2 IAGP MGI PMID:37797712 NCBI chr  X:156,330,818...156,381,711
Ensembl chr  X:156,318,367...156,381,711
JBrowse link
G Mef2c myocyte enhancer factor 2C IAGP MGI PMID:17336904 NCBI chr13:83,652,136...83,815,197
Ensembl chr13:83,652,153...83,815,199
JBrowse link
G Mepe matrix extracellular phosphoglycoprotein with ASARM motif (bone) IAGP MGI PMID:12421822 NCBI chr 5:104,473,195...104,486,477
Ensembl chr 5:104,473,195...104,486,477
JBrowse link
G Mmp13 matrix metallopeptidase 13 IAGP MGI PMID:15539485 NCBI chr 9:7,272,514...7,283,333
Ensembl chr 9:7,272,514...7,283,331
JBrowse link
G Mmp14 matrix metallopeptidase 14 (membrane-inserted) IAGP MGI PMID:10520996 NCBI chr14:54,669,055...54,679,913
Ensembl chr14:54,669,069...54,682,821
JBrowse link
G Mmp2 matrix metallopeptidase 2 IAGP MGI PMID:17400654 NCBI chr 8:93,553,920...93,580,049
Ensembl chr 8:93,553,919...93,580,048
JBrowse link
G Mmp9 matrix metallopeptidase 9 IAGP MGI PMID:9590175 PMID:15539485 NCBI chr 2:164,782,246...164,797,770
Ensembl chr 2:164,782,700...164,797,770
JBrowse link
G Msx2 msh homeobox 2 IAGP MGI PMID:10742104 NCBI chr13:53,620,917...53,626,816
Ensembl chr13:53,620,920...53,627,110
JBrowse link
G Mt2 metallothionein 2 IAGP MGI PMID:10869470 NCBI chr 8:94,899,246...94,900,195
Ensembl chr 8:94,899,292...94,900,196
JBrowse link
G Ncor2 nuclear receptor co-repressor 2 IAGP MGI PMID:24191050 NCBI chr 5:125,094,217...125,256,302
Ensembl chr 5:125,094,217...125,256,283
JBrowse link
G Ndor1 NADPH dependent diflavin oxidoreductase 1 IAGP MGI PMID:18371340 NCBI chr 2:25,134,825...25,145,458
Ensembl chr 2:25,134,833...25,146,034
Ensembl chr 2:25,134,833...25,146,034
Ensembl chr 2:25,134,833...25,146,034
JBrowse link
G Nfkb2 nuclear factor of kappa light polypeptide gene enhancer in B cells 2, p49/p100 IAGP MGI PMID:18025196 NCBI chr19:46,285,478...46,300,839
Ensembl chr19:46,292,759...46,300,824
JBrowse link
G Nlrp3 NLR family, pyrin domain containing 3 IAGP MGI PMID:22558291 NCBI chr11:59,432,395...59,457,781
Ensembl chr11:59,432,394...59,457,782
JBrowse link
G Nos1 nitric oxide synthase 1, neuronal IAGP MGI PMID:15297441 PMID:18433298 NCBI chr 5:118,004,904...118,096,905
Ensembl chr 5:117,919,097...118,096,905
JBrowse link
G Nos2 nitric oxide synthase 2, inducible IAGP MGI PMID:18433298 NCBI chr11:78,811,613...78,851,052
Ensembl chr11:78,811,613...78,851,080
JBrowse link
G Nos3 nitric oxide synthase 3, endothelial cell IAGP MGI PMID:18433298 NCBI chr 5:24,569,772...24,589,472
Ensembl chr 5:24,569,808...24,589,472
JBrowse link
G Notch2 notch 2 IAGP MGI PMID:28592489 NCBI chr 3:97,920,854...98,057,683
Ensembl chr 3:97,920,843...98,057,677
JBrowse link
G Npy2r neuropeptide Y receptor Y2 IAGP MGI PMID:11927618 PMID:12861009 NCBI chr 3:82,445,688...82,455,404
Ensembl chr 3:82,445,690...82,455,391
JBrowse link
G Npy4r neuropeptide Y receptor Y4 IAGP MGI PMID:12861009 NCBI chr14:33,867,603...33,874,376
Ensembl chr14:33,865,949...33,874,446
JBrowse link
G Ocln occludin IAGP MGI PMID:16679411 NCBI chr13:100,633,012...100,689,226
Ensembl chr13:100,633,015...100,689,226
JBrowse link
G Oscar osteoclast associated receptor IAGP MGI PMID:21841309 NCBI chr 7:3,612,812...3,619,156
Ensembl chr 7:3,612,812...3,619,156
JBrowse link
G Ostf1 osteoclast stimulating factor 1 IAGP MGI PMID:28936620 NCBI chr19:18,557,728...18,609,177
Ensembl chr19:18,493,501...18,609,187
JBrowse link
G Ostm1 osteopetrosis associated transmembrane protein 1 IAGP MGI PMID:23160729 NCBI chr10:42,554,912...42,578,458
Ensembl chr10:42,459,818...42,578,455
JBrowse link
G P3h1 prolyl 3-hydroxylase 1 IAGP MGI PMID:20363744 PMID:24465224 NCBI chr 4:119,090,112...119,106,174
Ensembl chr 4:119,090,112...119,106,172
JBrowse link
G Papss2 3'-phosphoadenosine 5'-phosphosulfate synthase 2 IAGP MGI PMID:5713631 NCBI chr19:32,573,072...32,644,587
Ensembl chr19:32,573,190...32,644,587
JBrowse link
G Pcolce procollagen C-endopeptidase enhancer protein IAGP MGI PMID:16354695 NCBI chr 5:137,603,369...137,609,666
Ensembl chr 5:137,603,365...137,612,046
JBrowse link
G Pdia3 protein disulfide isomerase associated 3 IAGP MGI PMID:20576531 NCBI chr 2:121,244,383...121,269,168
Ensembl chr 2:121,244,256...121,269,168
JBrowse link
G Pdk4 pyruvate dehydrogenase kinase, isoenzyme 4 IAGP MGI PMID:21803180 NCBI chr 6:5,483,351...5,496,278
Ensembl chr 6:5,483,351...5,496,309
JBrowse link
G Pgr progesterone receptor IAGP MGI PMID:18276762 NCBI chr 9:8,890,017...8,968,612
Ensembl chr 9:8,899,834...8,968,612
JBrowse link
G Phospho1 phosphatase, orphan 1 IAGP MGI PMID:20684022 NCBI chr11:95,715,326...95,722,966
Ensembl chr11:95,715,325...95,722,966
JBrowse link
G Plcg2 phospholipase C, gamma 2 IAGP MGI PMID:17053833 NCBI chr 8:118,225,014...118,361,881
Ensembl chr 8:118,225,030...118,361,881
JBrowse link
G Postn periostin, osteoblast specific factor IAGP MGI PMID:16314533 NCBI chr 3:54,266,688...54,298,462
Ensembl chr 3:54,268,530...54,298,458
JBrowse link
G Pparg peroxisome proliferator activated receptor gamma IAGP MGI PMID:18059282 PMID:21876000 NCBI chr 6:115,337,828...115,467,365
Ensembl chr 6:115,337,912...115,467,360
JBrowse link
G Prkar1a protein kinase, cAMP dependent regulatory, type I, alpha IAGP MGI PMID:27589370 NCBI chr11:109,539,849...109,560,489
Ensembl chr11:109,540,231...109,560,482
JBrowse link
G Prkd3 protein kinase D3 IEA MGI NCBI chr17:79,256,834...79,328,245
Ensembl chr17:79,256,834...79,328,245
JBrowse link
G Prrx1 paired related homeobox 1 IAGP MGI PMID:18198333 NCBI chr 1:163,072,688...163,142,714
Ensembl chr 1:163,072,688...163,141,279
JBrowse link
G Pth parathyroid hormone IAGP MGI PMID:11994406 NCBI chr 7:112,984,783...112,987,879
Ensembl chr 7:112,984,787...112,987,777
JBrowse link
G Pth1r parathyroid hormone 1 receptor IAGP MGI PMID:21220409 NCBI chr 9:110,551,132...110,576,213
Ensembl chr 9:110,551,153...110,576,213
JBrowse link
G Pthlh parathyroid hormone-like peptide IAGP MGI PMID:11760831 PMID:11994406 PMID:16138191 PMID:19091948 NCBI chr 6:147,153,607...147,165,511
Ensembl chr 6:147,153,599...147,165,681
JBrowse link
G Qrfpr pyroglutamylated RFamide peptide receptor IAGP MGI PMID:16382160 NCBI chr 3:36,233,575...36,276,462
Ensembl chr 3:36,233,573...36,276,462
JBrowse link
G Rag1 recombination activating 1 IAGP MGI PMID:29178458 NCBI chr 2:101,468,597...101,479,877
Ensembl chr 2:101,468,627...101,479,846
JBrowse link
G Rassf2 Ras association (RalGDS/AF-6) domain family member 2 IAGP MGI PMID:22227519 NCBI chr 2:131,834,770...131,872,336
Ensembl chr 2:131,831,335...131,872,178
JBrowse link
G Rgs12 regulator of G-protein signaling 12 IAGP MGI PMID:23349096 NCBI chr 5:35,106,273...35,196,988
Ensembl chr 5:35,106,789...35,196,988
JBrowse link
G Runx2 runt related transcription factor 2 IAGP MGI PMID:15007057 PMID:19028669 NCBI chr17:44,806,873...45,125,518
Ensembl chr17:44,806,874...45,125,684
JBrowse link
G Runx3 runt related transcription factor 3 IAGP MGI PMID:25605327 NCBI chr 4:134,847,956...134,905,301
Ensembl chr 4:134,847,963...134,905,301
JBrowse link
G Satb2 special AT-rich sequence binding protein 2 IAGP MGI PMID:16751105 PMID:22527485 NCBI chr 1:56,833,145...57,019,350
Ensembl chr 1:56,833,140...57,017,809
JBrowse link
G Scube2 signal peptide, CUB domain, EGF-like 2 IAGP MGI PMID:25639508 NCBI chr 7:109,397,897...109,464,886
Ensembl chr 7:109,397,883...109,464,886
JBrowse link
G Sfrp1 secreted frizzled-related protein 1 IAGP MGI PMID:14976225 NCBI chr 8:23,901,401...23,939,648
Ensembl chr 8:23,901,518...23,939,648
JBrowse link
G Sgpl1 sphingosine phosphate lyase 1 IAGP MGI PMID:19119317 NCBI chr10:60,934,421...60,983,463
Ensembl chr10:60,934,421...60,983,482
JBrowse link
G Slc34a1 solute carrier family 34 (sodium phosphate), member 1 IAGP MGI PMID:9560283 NCBI chr13:55,547,435...55,562,508
Ensembl chr13:55,546,000...55,563,405
JBrowse link
G Slc4a2 solute carrier family 4 (anion exchanger), member 2 IAGP MGI PMID:23341620 NCBI chr 5:24,628,834...24,645,945
Ensembl chr 5:24,628,835...24,645,948
JBrowse link
G Smad1 SMAD family member 1 IAGP MGI PMID:21420501 NCBI chr 8:80,065,024...80,126,057
Ensembl chr 8:80,065,024...80,126,147
JBrowse link
G Smad4 SMAD family member 4 IAGP MGI PMID:24006258 NCBI chr18:73,767,861...73,836,862
Ensembl chr18:73,772,080...73,836,851
JBrowse link
G Snx10 sorting nexin 10 IAGP MGI PMID:32278070 NCBI chr 6:51,500,882...51,567,659
Ensembl chr 6:51,500,881...51,567,659
JBrowse link
G Sost sclerostin IAGP MGI PMID:18269310 PMID:20952383 PMID:22886088 NCBI chr11:101,853,284...101,857,841
Ensembl chr11:101,853,284...101,857,841
JBrowse link
G Sox9 SRY (sex determining region Y)-box 9 IAGP MGI PMID:16203988 NCBI chr11:112,673,036...112,678,583
Ensembl chr11:112,673,050...112,678,586
JBrowse link
G Sp7 Sp7 transcription factor 7 IAGP MGI PMID:16203988 NCBI chr15:102,265,038...102,275,498
Ensembl chr15:102,265,041...102,275,617
JBrowse link
G Sparc secreted acidic cysteine rich glycoprotein IAGP MGI PMID:10749571 NCBI chr11:55,284,985...55,310,906
Ensembl chr11:55,285,326...55,314,009
JBrowse link
G Spop speckle-type BTB/POZ protein IAGP MGI PMID:27930311 NCBI chr11:95,304,909...95,384,236
Ensembl chr11:95,304,906...95,384,232
JBrowse link
G Sqstm1 sequestosome 1 IAGP MGI PMID:21515589 PMID:29555685 NCBI chr11:50,090,979...50,105,303
Ensembl chr11:50,090,193...50,101,654
JBrowse link
G Src Rous sarcoma oncogene IAGP MGI PMID:8634424 NCBI chr 2:157,265,828...157,313,758
Ensembl chr 2:157,260,364...157,313,782
JBrowse link
G Suco SUN domain containing ossification factor IAGP MGI PMID:20440000 NCBI chr 1:161,643,681...161,704,506
Ensembl chr 1:161,643,683...161,704,251
JBrowse link
G Tcirg1 T cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 protein A3 IAGP MGI PMID:21305608 NCBI chr19:3,946,050...3,957,717
Ensembl chr19:3,946,050...3,957,133
JBrowse link
G Thra thyroid hormone receptor alpha IAGP MGI PMID:11731613 PMID:16051666 PMID:17327419 NCBI chr11:98,631,539...98,659,832
Ensembl chr11:98,631,464...98,659,832
JBrowse link
G Thrb thyroid hormone receptor beta IAGP MGI PMID:17327419 NCBI chr14:4,429,599...4,810,538
Ensembl chr14:4,431,611...4,809,435
JBrowse link
G Tmem163 transmembrane protein 163 IAGP MGI PMID:12370412 NCBI chr 1:127,418,079...127,605,758
Ensembl chr 1:127,414,283...127,607,285
JBrowse link
G Tmem64 transmembrane protein 64 IAGP MGI PMID:23395171 NCBI chr 4:15,265,820...15,286,753
Ensembl chr 4:15,265,831...15,286,753
JBrowse link
G Tnf tumor necrosis factor IAGP MGI PMID:17266397 NCBI chr17:35,418,343...35,420,983
Ensembl chr17:35,418,357...35,420,983
JBrowse link
G Tnfrsf11a tumor necrosis factor receptor superfamily, member 11a, NFKB activator IAGP MGI PMID:15355564 PMID:33724536 NCBI chr 1:105,708,443...105,777,172
Ensembl chr 1:105,708,443...105,775,709
JBrowse link
G Tnfrsf11b tumor necrosis factor receptor superfamily, member 11b (osteoprotegerin) IAGP MGI PMID:9647741 NCBI chr15:54,114,014...54,141,700
Ensembl chr15:54,114,015...54,141,880
JBrowse link
G Tnfrsf1a tumor necrosis factor receptor superfamily, member 1a IAGP MGI PMID:11455125 NCBI chr 6:125,326,686...125,339,446
Ensembl chr 6:125,326,325...125,339,447
JBrowse link
G Tnfrsf1b tumor necrosis factor receptor superfamily, member 1b IAGP MGI PMID:11455125 NCBI chr 4:144,938,938...144,973,453
Ensembl chr 4:144,940,033...144,973,440
JBrowse link
G Tnfsf11 tumor necrosis factor (ligand) superfamily, member 11 IAGP MGI PMID:21909105 PMID:22068587 NCBI chr14:78,514,886...78,545,483
Ensembl chr14:78,514,885...78,545,483
JBrowse link
G Tnfsf14 tumor necrosis factor (ligand) superfamily, member 14 IAGP MGI PMID:29178458 NCBI chr17:57,496,437...57,501,182
Ensembl chr17:57,496,492...57,501,177
JBrowse link
G Tob2 transducer of ERBB2, 2 IAGP MGI PMID:18358842 NCBI chr15:81,732,471...81,744,742
Ensembl chr15:81,732,473...81,742,997
JBrowse link
G Trp53 transformation related protein 53 IAGP MGI PMID:12533509 NCBI chr11:69,471,174...69,482,699
Ensembl chr11:69,471,185...69,482,699
JBrowse link
G Tsc1 TSC complex subunit 1 IAGP MGI PMID:28523278 NCBI chr 2:28,531,005...28,581,183
Ensembl chr 2:28,531,240...28,581,179
JBrowse link
G Twist2 twist basic helix-loop-helix transcription factor 2 IAGP MGI PMID:17336904 PMID:21924256 NCBI chr 1:91,729,183...91,775,756
Ensembl chr 1:91,729,183...91,775,750
JBrowse link
G Tyrobp TYRO protein tyrosine kinase binding protein IAGP MGI PMID:15073337 PMID:21841309 NCBI chr 7:30,113,207...30,117,007
Ensembl chr 7:30,113,185...30,117,010
JBrowse link
G Vdr vitamin D (1,25-dihydroxyvitamin D3) receptor IAGP MGI PMID:9241280 PMID:17099775 NCBI chr15:97,752,308...97,806,177
Ensembl chr15:97,752,306...97,808,511
JBrowse link
G Wwox WW domain-containing oxidoreductase IAGP MGI PMID:18487609 PMID:23254685 NCBI chr 8:115,166,377...116,079,451
Ensembl chr 8:115,166,395...116,079,447
JBrowse link
G Zdhhc13 zinc finger, DHHC domain containing 13 IAGP MGI PMID:20548961 NCBI chr 7:48,438,751...48,477,188
Ensembl chr 7:48,438,751...48,477,188
JBrowse link
G Zfp467 zinc finger protein 467 IAGP MGI PMID:33359894 NCBI chr 6:48,404,626...48,422,926
Ensembl chr 6:48,404,631...48,422,759
JBrowse link
G Zmpste24 zinc metallopeptidase, STE24 IAGP MGI PMID:12235369 NCBI chr 4:120,916,434...120,955,452
Ensembl chr 4:120,916,434...120,955,438
JBrowse link
abnormal bone trabecula morphology term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agtr2 angiotensin II receptor, type 2 IAGP MGI PMID:19004830 NCBI chr  X:21,350,863...21,355,072
Ensembl chr  X:21,350,783...21,355,403
JBrowse link
G Atf4 activating transcription factor 4 IAGP MGI PMID:15109498 NCBI chr15:80,139,385...80,141,746
Ensembl chr15:80,139,385...80,141,742
JBrowse link
G Calcr calcitonin receptor IAGP MGI PMID:18627265 NCBI chr 6:3,685,678...3,764,713
Ensembl chr 6:3,685,680...3,764,714
JBrowse link
G Cav1 caveolin 1, caveolae protein IAGP MGI PMID:17550335 NCBI chr 6:17,306,387...17,341,323
Ensembl chr 6:17,306,334...17,341,451
JBrowse link
G Ccr2 C-C motif chemokine receptor 2 IAGP MGI PMID:19330010 NCBI chr 9:123,901,954...123,913,594
Ensembl chr 9:123,901,987...123,913,594
JBrowse link
G Cebpb CCAAT/enhancer binding protein beta IAGP MGI PMID:19440205 NCBI chr 2:167,530,835...167,532,352
Ensembl chr 2:167,530,835...167,532,338
JBrowse link
G Cyp19a1 cytochrome P450, family 19, subfamily a, polypeptide 1 IAGP MGI PMID:11162635 NCBI chr 9:54,073,221...54,175,448
Ensembl chr 9:54,073,221...54,175,394
JBrowse link
G Farp2 FERM, RhoGEF and pleckstrin domain protein 2 IAGP MGI PMID:20702777 NCBI chr 1:93,439,826...93,549,698
Ensembl chr 1:93,439,801...93,549,698
JBrowse link
G Fbn1 fibrillin 1 IAGP MGI PMID:22374917 NCBI chr 2:125,142,514...125,348,417
Ensembl chr 2:125,142,514...125,349,913
JBrowse link
G Hivep3 human immunodeficiency virus type I enhancer binding protein 3 IAGP MGI PMID:23945236 NCBI chr 4:119,590,982...119,992,608
Ensembl chr 4:119,590,981...119,995,242
JBrowse link
G Igf2 insulin-like growth factor 2 IAGP MGI PMID:21148188 NCBI chr 7:142,204,505...142,220,566
Ensembl chr 7:142,204,503...142,220,553
JBrowse link
G Jak1 Janus kinase 1 IAGP MGI PMID:23791841 NCBI chr 4:101,009,171...101,122,493
Ensembl chr 4:101,009,564...101,122,479
JBrowse link
G Klf10 Kruppel-like transcription factor 10 IAGP MGI PMID:16876494 NCBI chr15:38,291,702...38,300,950
Ensembl chr15:38,291,707...38,300,950
JBrowse link
G Lrp5 low density lipoprotein receptor-related protein 5 IAGP MGI PMID:23945236 NCBI chr19:3,634,825...3,736,574
Ensembl chr19:3,634,828...3,736,564
JBrowse link
G Naca nascent polypeptide-associated complex alpha polypeptide IAGP MGI PMID:19884350 NCBI chr10:127,869,144...127,884,506
Ensembl chr10:127,871,444...127,884,506
JBrowse link
G Notch2 notch 2 IAGP MGI PMID:28592489 NCBI chr 3:97,920,854...98,057,683
Ensembl chr 3:97,920,843...98,057,677
JBrowse link
G Notch3 notch 3 IAGP MGI PMID:30042232 NCBI chr17:32,339,794...32,385,869
Ensembl chr17:32,339,794...32,385,826
JBrowse link
G Npr2 natriuretic peptide receptor 2 IAGP MGI PMID:5713631 NCBI chr 4:43,629,015...43,651,437
Ensembl chr 4:43,631,935...43,651,244
JBrowse link
G Npr3 natriuretic peptide receptor 3 IAGP MGI PMID:10377427 NCBI chr15:11,839,982...11,907,287
Ensembl chr15:11,839,982...11,907,373
JBrowse link
G Pax8 paired box 8 IAGP MGI PMID:17932107 NCBI chr 2:24,310,563...24,365,611
Ensembl chr 2:24,310,572...24,365,611
JBrowse link
G Pparg peroxisome proliferator activated receptor gamma IAGP MGI PMID:18059282 PMID:20519122 NCBI chr 6:115,337,828...115,467,365
Ensembl chr 6:115,337,912...115,467,360
JBrowse link
G Pthlh parathyroid hormone-like peptide IAGP MGI PMID:8314082 NCBI chr 6:147,153,607...147,165,511
Ensembl chr 6:147,153,599...147,165,681
JBrowse link
G Ptpn2 protein tyrosine phosphatase, non-receptor type 2 IAGP MGI PMID:22590589 NCBI chr18:67,798,571...67,857,697
Ensembl chr18:67,798,581...67,857,665
JBrowse link
G Sbno2 strawberry notch 2 IAGP MGI PMID:23980096 NCBI chr10:79,892,826...79,941,942
Ensembl chr10:79,892,826...79,941,405
JBrowse link
G Socs2 suppressor of cytokine signaling 2 IAGP MGI PMID:18803233 NCBI chr10:95,219,765...95,253,176
Ensembl chr10:95,221,224...95,253,042
JBrowse link
G Src Rous sarcoma oncogene IAGP MGI PMID:1997203 NCBI chr 2:157,265,828...157,313,758
Ensembl chr 2:157,260,364...157,313,782
JBrowse link
G Terc telomerase RNA component IAGP MGI PMID:24626990 NCBI chr 3:96,321,753...96,322,149
Ensembl chr 3:96,321,753...96,322,149
JBrowse link
G Tmem119 transmembrane protein 119 IAGP MGI PMID:22416756 NCBI chr 5:113,931,790...113,938,457
Ensembl chr 5:113,931,790...113,938,577
JBrowse link
G Tmem64 transmembrane protein 64 IAGP MGI PMID:23395171 NCBI chr 4:15,265,820...15,286,753
Ensembl chr 4:15,265,831...15,286,753
JBrowse link
G Tshr thyroid stimulating hormone receptor IAGP MGI PMID:17932107 NCBI chr12:91,367,767...91,507,283
Ensembl chr12:91,351,337...91,516,582
JBrowse link
G Wrn Werner syndrome RecQ like helicase IAGP MGI PMID:24626990 NCBI chr 8:33,724,400...33,875,591
Ensembl chr 8:33,724,412...33,875,555
JBrowse link
abnormal trabecular bone thickness term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Calcr calcitonin receptor IAGP MGI PMID:18627265 NCBI chr 6:3,685,678...3,764,713
Ensembl chr 6:3,685,680...3,764,714
JBrowse link
G Nos3 nitric oxide synthase 3, endothelial cell IAGP MGI PMID:11141498 NCBI chr 5:24,569,772...24,589,472
Ensembl chr 5:24,569,808...24,589,472
JBrowse link
G Pdk4 pyruvate dehydrogenase kinase, isoenzyme 4 IAGP MGI PMID:21803180 NCBI chr 6:5,483,351...5,496,278
Ensembl chr 6:5,483,351...5,496,309
JBrowse link
abnormal trabecular bone volume term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb4 ATP-binding cassette, sub-family B member 4 IAGP MGI PMID:23545228 NCBI chr 5:8,943,614...9,009,226
Ensembl chr 5:8,943,717...9,009,231
JBrowse link
G Farp2 FERM, RhoGEF and pleckstrin domain protein 2 IAGP MGI PMID:20702777 NCBI chr 1:93,439,826...93,549,698
Ensembl chr 1:93,439,801...93,549,698
JBrowse link
G Pdk4 pyruvate dehydrogenase kinase, isoenzyme 4 IAGP MGI PMID:21803180 NCBI chr 6:5,483,351...5,496,278
Ensembl chr 6:5,483,351...5,496,309
JBrowse link
absent bone trabeculae term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fam20c FAM20C, golgi associated secretory pathway kinase IAGP MGI PMID:22732358 NCBI chr 5:138,740,836...138,795,818
Ensembl chr 5:138,740,269...138,795,832
JBrowse link
G Kl klotho IEA MGI NCBI chr 5:150,876,072...150,917,282
Ensembl chr 5:150,876,072...150,917,282
JBrowse link
G Mia3 MIA SH3 domain ER export factor 3 IAGP MGI PMID:21606205 NCBI chr 1:183,107,091...183,151,091
Ensembl chr 1:183,107,682...183,150,894
JBrowse link
G Mmp14 matrix metallopeptidase 14 (membrane-inserted) IAGP MGI PMID:18022611 NCBI chr14:54,669,055...54,679,913
Ensembl chr14:54,669,069...54,682,821
JBrowse link
G Mmp16 matrix metallopeptidase 16 IAGP MGI PMID:18022611 NCBI chr 4:17,853,072...18,117,479
Ensembl chr 4:17,852,893...18,119,145
JBrowse link
G Tent5a terminal nucleotidyltransferase 5A IAGP MGI PMID:26803617 NCBI chr 9:85,202,492...85,209,203
Ensembl chr 9:85,202,492...85,209,401
JBrowse link
G Tnfrsf11b tumor necrosis factor receptor superfamily, member 11b (osteoprotegerin) IAGP MGI PMID:9573043 NCBI chr15:54,114,014...54,141,700
Ensembl chr15:54,114,015...54,141,880
JBrowse link
decreased bone trabecula number term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb4 ATP-binding cassette, sub-family B member 4 IAGP MGI PMID:23545228 NCBI chr 5:8,943,614...9,009,226
Ensembl chr 5:8,943,717...9,009,231
JBrowse link
G Abhd5 abhydrolase domain containing 5 IAGP MGI PMID:24652767 NCBI chr 9:122,180,681...122,210,589
Ensembl chr 9:122,180,673...122,210,589
JBrowse link
G Acbd5 acyl-Coenzyme A binding domain containing 5 IEA MGI NCBI chr 2:22,958,189...23,004,525
Ensembl chr 2:22,958,179...23,005,570
JBrowse link
G Adipoq adiponectin, C1Q and collagen domain containing IAGP MGI PMID:23684624 NCBI chr16:22,965,286...22,976,718
Ensembl chr16:22,965,286...22,976,778
JBrowse link
G Akr1a1 aldo-keto reductase family 1, member A1 IAGP MGI PMID:20410296 NCBI chr 4:116,493,707...116,508,871
Ensembl chr 4:116,493,707...116,508,877
JBrowse link
G Ankrd11 ankyrin repeat domain 11 IAGP MGI PMID:33996804 NCBI chr 8:123,610,060...123,769,023
Ensembl chr 8:123,610,561...123,769,016
JBrowse link
G Ano5 anoctamin 5 IAGP MGI PMID:30712070 PMID:34841576 NCBI chr 7:51,160,668...51,248,459
Ensembl chr 7:51,160,777...51,248,457
JBrowse link
G Apoe apolipoprotein E IAGP MGI PMID:17259598 NCBI chr 7:19,430,169...19,434,326
Ensembl chr 7:19,430,034...19,433,113
JBrowse link
G Atf4 activating transcription factor 4 IAGP MGI PMID:16751105 NCBI chr15:80,139,385...80,141,746
Ensembl chr15:80,139,385...80,141,742
JBrowse link
G Bbln bublin coiled coil protein IAGP MGI PMID:32569872 NCBI chr 2:32,269,120...32,271,877
Ensembl chr 2:32,267,109...32,271,950
JBrowse link
G Bmp1 bone morphogenetic protein 1 IAGP MGI PMID:24419319 NCBI chr14:70,711,998...70,758,280
Ensembl chr14:70,711,998...70,757,674
JBrowse link
G Casr calcium-sensing receptor IAGP MGI PMID:18765830 NCBI chr16:36,310,947...36,382,605
Ensembl chr16:36,314,058...36,382,503
JBrowse link
G Ccn3 cellular communication network factor 3 IAGP MGI PMID:19934377 NCBI chr15:54,609,306...54,617,158
Ensembl chr15:54,609,098...54,617,435
JBrowse link
G Cebpb CCAAT/enhancer binding protein beta IAGP MGI PMID:19440205 NCBI chr 2:167,530,835...167,532,352
Ensembl chr 2:167,530,835...167,532,338
JBrowse link
G Chd7 chromodomain helicase DNA binding protein 7 IAGP MGI PMID:35418650 NCBI chr 4:8,690,345...8,868,449
Ensembl chr 4:8,690,406...8,867,659
JBrowse link
G Chsy1 chondroitin sulfate synthase 1 IEA MGI NCBI chr 7:65,759,240...65,823,546
Ensembl chr 7:65,759,263...65,823,546
JBrowse link
G Ciita class II transactivator IAGP MGI PMID:24038328 NCBI chr16:10,297,877...10,348,928
Ensembl chr16:10,297,923...10,346,282
JBrowse link
G Cldn18 claudin 18 IAGP MGI PMID:23299504 NCBI chr 9:99,572,849...99,599,320
Ensembl chr 9:99,571,514...99,599,320
JBrowse link
G Clec11a C-type lectin domain family 11, member a IAGP MGI PMID:27976999 NCBI chr 7:43,953,190...43,956,383
Ensembl chr 7:43,952,111...43,956,326
JBrowse link
G Clec2d C-type lectin domain family 2, member d IAGP MGI PMID:18782774 NCBI chr 6:129,157,578...129,163,498
Ensembl chr 6:129,157,578...129,163,497
JBrowse link
G Cnot3 CCR4-NOT transcription complex, subunit 3 IAGP MGI PMID:24550297 NCBI chr 7:3,646,717...3,664,108
Ensembl chr 7:3,648,267...3,664,108
JBrowse link
G Col2a1 collagen, type II, alpha 1 IAGP MGI PMID:22028304 NCBI chr15:97,873,483...97,902,525
Ensembl chr15:97,873,483...97,902,576
JBrowse link
G Cthrc1 collagen triple helix repeat containing 1 IAGP MGI PMID:18779865 PMID:23908115 NCBI chr15:38,940,327...38,950,516
Ensembl chr15:38,940,327...38,950,516
JBrowse link
G Ctnnb1 catenin beta 1 IAGP MGI PMID:21876000 NCBI chr 9:120,762,466...120,789,573
Ensembl chr 9:120,758,282...120,789,573
JBrowse link
G Ctsk cathepsin K IAGP MGI PMID:23908115 NCBI chr 3:95,406,521...95,416,698
Ensembl chr 3:95,406,567...95,416,673
JBrowse link
G E2f1 E2F transcription factor 1 IAGP MGI PMID:33996804 NCBI chr 2:154,401,320...154,411,812
Ensembl chr 2:154,401,327...154,411,812
JBrowse link
G Eif4e3 eukaryotic translation initiation factor 4E member 3 IAGP MGI PMID:24652767 NCBI chr 6:99,599,008...99,669,834
Ensembl chr 6:99,602,096...99,643,732
JBrowse link
G Epas1 endothelial PAS domain protein 1 IAGP MGI PMID:22464323 NCBI chr17:87,061,292...87,140,838
Ensembl chr17:87,061,128...87,140,838
JBrowse link
G Fam210a family with sequence similarity 210, member A IAGP MGI PMID:29618611 NCBI chr18:68,393,248...68,433,404
Ensembl chr18:68,393,258...68,433,404
JBrowse link
G Fas Fas cell surface death receptor IAGP MGI PMID:17259598 NCBI chr19:34,267,926...34,305,175
Ensembl chr19:34,268,066...34,305,172
JBrowse link
G Fblim1 filamin binding LIM protein 1 IAGP MGI PMID:22556421 NCBI chr 4:141,303,373...141,333,351
Ensembl chr 4:141,303,373...141,333,407
JBrowse link
G Fbn1 fibrillin 1 IAGP MGI PMID:22374917 NCBI chr 2:125,142,514...125,348,417
Ensembl chr 2:125,142,514...125,349,913
JBrowse link
G Fgfr3 fibroblast growth factor receptor 3 IAGP MGI PMID:28230213 PMID:37345656 NCBI chr 5:33,879,068...33,894,412
Ensembl chr 5:33,879,018...33,894,412
JBrowse link
G Fig4 FIG4 phosphoinositide 5-phosphatase IAGP MGI PMID:23623387 NCBI chr10:41,064,168...41,179,237
Ensembl chr10:41,064,168...41,179,256
JBrowse link
G Fosl2 fos-like antigen 2 IAGP MGI PMID:24046454 NCBI chr 5:32,292,599...32,315,184
Ensembl chr 5:32,293,145...32,315,186
JBrowse link
G Fzd9 frizzled class receptor 9 IAGP MGI PMID:21402791 NCBI chr 5:135,277,792...135,279,901
Ensembl chr 5:135,277,792...135,280,084
JBrowse link
G Galc galactosylceramidase IAGP MGI PMID:20441793 NCBI chr12:98,168,543...98,226,565
Ensembl chr12:98,168,553...98,225,718
JBrowse link
G Gas5 growth arrest specific 5 IAGP MGI PMID:33006314 NCBI chr 1:160,862,171...160,866,109
Ensembl chr 1:160,861,992...160,866,116
JBrowse link
G Gna11 guanine nucleotide binding protein, alpha 11 IAGP MGI PMID:28194446 NCBI chr10:81,364,558...81,380,996
Ensembl chr10:81,364,558...81,381,024
JBrowse link
G Gt(ROSA)26Sor gene trap ROSA 26, Philippe Soriano IAGP MGI PMID:29621230 PMID:30204862 NCBI chr 6:113,044,389...113,054,205
Ensembl chr 6:113,043,843...113,054,294
JBrowse link
G Hfe homeostatic iron regulator IAGP MGI PMID:20976594 NCBI chr13:23,886,017...23,894,837
Ensembl chr13:23,886,017...23,894,837
JBrowse link
G Hif1a hypoxia inducible factor 1, alpha subunit IAGP MGI PMID:22464323 NCBI chr12:73,948,186...73,994,304
Ensembl chr12:73,948,149...73,994,304
JBrowse link
G Idh2 isocitrate dehydrogenase 2 (NADP+), mitochondrial IAGP MGI PMID:29527922 NCBI chr 7:79,744,594...79,768,356
Ensembl chr 7:79,744,594...79,765,140
JBrowse link
G Ifitm5 interferon induced transmembrane protein 5 IAGP MGI PMID:28880886 NCBI chr 7:140,528,871...140,530,156
Ensembl chr 7:140,528,871...140,530,204
JBrowse link
G Ifngr1 interferon gamma receptor 1 IAGP MGI PMID:21308779 NCBI chr10:19,467,697...19,485,977
Ensembl chr10:19,467,697...19,485,977
JBrowse link
G Igf1r insulin-like growth factor I receptor IAGP MGI PMID:12215457 NCBI chr 7:67,601,486...67,883,416
Ensembl chr 7:67,602,575...67,883,416
JBrowse link
G Il10 interleukin 10 IAGP MGI PMID:15362035 NCBI chr 1:130,947,459...130,952,707
Ensembl chr 1:130,947,582...130,952,711
JBrowse link
G Inpp5d inositol polyphosphate-5-phosphatase D IAGP MGI PMID:12161749 NCBI chr 1:87,548,034...87,648,232
Ensembl chr 1:87,548,034...87,648,229
JBrowse link
G Itln1 intelectin 1 (galactofuranose binding) IAGP MGI PMID:29619269 NCBI chr 1:171,345,691...171,362,893
Ensembl chr 1:171,345,690...171,362,862
JBrowse link
G Jak1 Janus kinase 1 IAGP MGI PMID:23791841 NCBI chr 4:101,009,171...101,122,493
Ensembl chr 4:101,009,564...101,122,479
JBrowse link
G Lmna lamin A IAGP MGI PMID:22030750 PMID:32128409 NCBI chr 3:88,388,455...88,413,842
Ensembl chr 3:88,387,454...88,417,263
JBrowse link
G Ly6a lymphocyte antigen 6 family member A IAGP MGI PMID:12732718 NCBI chr15:74,866,726...74,869,880
Ensembl chr15:74,866,726...74,869,880
JBrowse link
G Lyz2 lysozyme 2 IAGP MGI PMID:28287403 NCBI chr10:117,113,446...117,118,177
Ensembl chr10:117,113,236...117,118,226
JBrowse link
G Mcph1 microcephaly, primary autosomal recessive 1 IAGP MGI PMID:24652767 NCBI chr 8:18,645,132...18,858,110
Ensembl chr 8:18,645,147...18,853,205
JBrowse link
G Mecom MDS1 and EVI1 complex locus IAGP MGI PMID:24316420 NCBI chr 3:30,005,445...30,563,937
Ensembl chr 3:30,005,445...30,602,157
JBrowse link
G Mfap2 microfibrillar-associated protein 2 IAGP MGI PMID:23963447 NCBI chr 4:140,737,735...140,743,284
Ensembl chr 4:140,737,729...140,743,295
JBrowse link
G Mfap5 microfibrillar associated protein 5 IAGP MGI PMID:23963447 NCBI chr 6:122,490,543...122,506,249
Ensembl chr 6:122,482,804...122,506,249
JBrowse link
G Mgp matrix Gla protein IAGP MGI PMID:23994172 NCBI chr 6:136,849,433...136,852,821
Ensembl chr 6:136,849,433...136,852,821
JBrowse link
G Naca nascent polypeptide-associated complex alpha polypeptide IAGP MGI PMID:19884350 NCBI chr10:127,869,144...127,884,506
Ensembl chr10:127,871,444...127,884,506
JBrowse link
G Ndor1 NADPH dependent diflavin oxidoreductase 1 IAGP MGI PMID:24419319 NCBI chr 2:25,134,825...25,145,458
Ensembl chr 2:25,134,833...25,146,034
Ensembl chr 2:25,134,833...25,146,034
Ensembl chr 2:25,134,833...25,146,034
JBrowse link
G Nlrp3 NLR family, pyrin domain containing 3 IAGP MGI PMID:22558291 NCBI chr11:59,432,395...59,457,781
Ensembl chr11:59,432,394...59,457,782
JBrowse link
G Notch2 notch 2 IAGP MGI PMID:26627824 PMID:28592489 PMID:28856714 NCBI chr 3:97,920,854...98,057,683
Ensembl chr 3:97,920,843...98,057,677
JBrowse link
G Notch3 notch 3 IAGP MGI PMID:30042232 NCBI chr17:32,339,794...32,385,869
Ensembl chr17:32,339,794...32,385,826
JBrowse link
G Nr3c1 nuclear receptor subfamily 3, group C, member 1 IAGP MGI PMID:20519123 NCBI chr18:39,543,598...39,652,485
Ensembl chr18:39,543,598...39,652,474
JBrowse link
G P3h1 prolyl 3-hydroxylase 1 IAGP MGI PMID:24465224 NCBI chr 4:119,090,112...119,106,174
Ensembl chr 4:119,090,112...119,106,172
JBrowse link
G Pls3 plastin 3 (T-isoform) IAGP MGI PMID:30204862 NCBI chr  X:74,829,259...74,918,788
Ensembl chr  X:74,829,260...74,918,788
JBrowse link
G Pparg peroxisome proliferator activated receptor gamma IAGP MGI PMID:21876000 NCBI chr 6:115,337,828...115,467,365
Ensembl chr 6:115,337,912...115,467,360
JBrowse link
G Ppib peptidylprolyl isomerase B IAGP MGI PMID:24968150 NCBI chr 9:65,967,451...65,973,911
Ensembl chr 9:65,967,504...65,973,905
JBrowse link
G Ptpn2 protein tyrosine phosphatase, non-receptor type 2 IAGP MGI PMID:22000926 NCBI chr18:67,798,571...67,857,697
Ensembl chr18:67,798,581...67,857,665
JBrowse link
G Rassf2 Ras association (RalGDS/AF-6) domain family member 2 IAGP MGI PMID:22227519 NCBI chr 2:131,834,770...131,872,336
Ensembl chr 2:131,831,335...131,872,178
JBrowse link
G Rnf146 ring finger protein 146 IAGP MGI PMID:28287403 PMID:28581440 NCBI chr10:29,220,172...29,238,438
Ensembl chr10:29,220,172...29,238,438
JBrowse link
G Ror2 receptor tyrosine kinase-like orphan receptor 2 IAGP MGI PMID:18353862 NCBI chr13:53,263,353...53,440,160
Ensembl chr13:53,263,348...53,440,160
JBrowse link
G Rps6ka3 ribosomal protein S6 kinase polypeptide 3 IAGP MGI PMID:15109498 NCBI chr  X:158,038,652...158,151,240
Ensembl chr  X:157,993,303...158,151,240
JBrowse link
G Runx2 runt related transcription factor 2 IAGP MGI PMID:16751105 PMID:25244033 NCBI chr17:44,806,873...45,125,518
Ensembl chr17:44,806,874...45,125,684
JBrowse link
G Satb2 special AT-rich sequence binding protein 2 IAGP MGI PMID:16751105 NCBI chr 1:56,833,145...57,019,350
Ensembl chr 1:56,833,140...57,017,809
JBrowse link
G Scube2 signal peptide, CUB domain, EGF-like 2 IAGP MGI PMID:25639508 NCBI chr 7:109,397,897...109,464,886
Ensembl chr 7:109,397,883...109,464,886
JBrowse link
G Serpinf1 serine (or cysteine) peptidase inhibitor, clade F, member 1 IAGP MGI PMID:23413146 NCBI chr11:75,300,855...75,313,449
Ensembl chr11:75,300,595...75,313,527
JBrowse link
G Sh3bp2 SH3-domain binding protein 2 IAGP MGI PMID:17218256 NCBI chr 5:34,683,128...34,720,983
Ensembl chr 5:34,683,182...34,720,985
JBrowse link
G Slc39a13 solute carrier family 39 (metal ion transporter), member 13 IAGP MGI PMID:18985159 NCBI chr 2:90,892,136...90,900,754
Ensembl chr 2:90,892,136...90,900,762
JBrowse link
G Slc39a14 solute carrier family 39 (zinc transporter), member 14 IAGP MGI PMID:21445361 NCBI chr14:70,540,916...70,588,873
Ensembl chr14:70,540,918...70,588,874
JBrowse link
G Smad1 SMAD family member 1 IAGP MGI PMID:21420501 NCBI chr 8:80,065,024...80,126,057
Ensembl chr 8:80,065,024...80,126,147
JBrowse link
G Smpd3 sphingomyelin phosphodiesterase 3, neutral IAGP MGI PMID:8456819 NCBI chr 8:106,979,180...107,064,597
Ensembl chr 8:106,979,180...107,064,620
JBrowse link
G Spop speckle-type BTB/POZ protein IAGP MGI PMID:27930311 NCBI chr11:95,304,909...95,384,236
Ensembl chr11:95,304,906...95,384,232
JBrowse link
G Suco SUN domain containing ossification factor IAGP MGI PMID:20440000 NCBI chr 1:161,643,681...161,704,506
Ensembl chr 1:161,643,683...161,704,251
JBrowse link
G Tead3 TEA domain family member 3 IEA MGI NCBI chr17:28,550,645...28,569,779
Ensembl chr17:28,550,645...28,569,791
JBrowse link
G Terc telomerase RNA component IAGP MGI PMID:24626990 NCBI chr 3:96,321,753...96,322,149
Ensembl chr 3:96,321,753...96,322,149
JBrowse link
G Tll1 tolloid-like IAGP MGI PMID:24419319 NCBI chr 8:64,466,132...64,659,043
Ensembl chr 8:64,467,965...64,659,305
JBrowse link
G Tmem119 transmembrane protein 119 IAGP MGI PMID:22416756 NCBI chr 5:113,931,790...113,938,457
Ensembl chr 5:113,931,790...113,938,577
JBrowse link
G Tnfsf11 tumor necrosis factor (ligand) superfamily, member 11 IAGP MGI PMID:22836362 NCBI chr14:78,514,886...78,545,483
Ensembl chr14:78,514,885...78,545,483
JBrowse link
G Twsg1 twisted gastrulation BMP signaling modulator 1 IAGP MGI PMID:16934545 NCBI chr17:66,230,060...66,258,198
Ensembl chr17:66,228,967...66,258,221
JBrowse link
G Usp34 ubiquitin specific peptidase 34 IAGP MGI PMID:30181118 NCBI chr11:23,256,433...23,440,560
Ensembl chr11:23,256,895...23,440,560
JBrowse link
G Vhl von Hippel-Lindau tumor suppressor IAGP MGI PMID:22464323 NCBI chr 6:113,600,955...113,608,595
Ensembl chr 6:113,600,920...113,608,594
JBrowse link
G Wnt4 wingless-type MMTV integration site family, member 4 IAGP MGI PMID:32497039 NCBI chr 4:137,004,946...137,026,812
Ensembl chr 4:137,004,800...137,027,037
JBrowse link
G Wrn Werner syndrome RecQ like helicase IAGP MGI PMID:24626990 NCBI chr 8:33,724,400...33,875,591
Ensembl chr 8:33,724,412...33,875,555
JBrowse link
G Wwox WW domain-containing oxidoreductase IAGP MGI PMID:19936220 PMID:23254685 NCBI chr 8:115,166,377...116,079,451
Ensembl chr 8:115,166,395...116,079,447
JBrowse link
G Xylt1 xylosyltransferase 1 IAGP MGI PMID:24161523 NCBI chr 7:116,980,214...117,266,853
Ensembl chr 7:116,980,214...117,272,803
JBrowse link
G Zbtb40 zinc finger and BTB domain containing 40 IAGP MGI PMID:32497039 NCBI chr 4:136,707,043...136,776,129
Ensembl chr 4:136,707,043...136,776,112
JBrowse link
decreased bone trabecular spacing term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ager advanced glycosylation end product-specific receptor IAGP MGI PMID:16403440 NCBI chr17:34,816,545...34,819,911
Ensembl chr17:34,816,836...34,819,910
JBrowse link
G Ccdc154 coiled-coil domain containing 154 IAGP MGI PMID:20121924 NCBI chr17:25,381,142...25,390,887
Ensembl chr17:25,381,435...25,390,887
JBrowse link
G Clcn7 chloride channel, voltage-sensitive 7 IAGP MGI PMID:24185277 PMID:28942122 NCBI chr17:25,352,353...25,381,077
Ensembl chr17:25,352,365...25,381,078
JBrowse link
G Ctsk cathepsin K IAGP MGI PMID:27777970 NCBI chr 3:95,406,521...95,416,698
Ensembl chr 3:95,406,567...95,416,673
JBrowse link
G Cxxc5 CXXC finger 5 IAGP MGI PMID:25633194 NCBI chr18:35,962,432...35,994,746
Ensembl chr18:35,962,450...35,994,741
JBrowse link
G F2r coagulation factor II thrombin receptor IAGP MGI PMID:25460576 NCBI chr13:95,738,288...95,754,974
Ensembl chr13:95,738,311...95,754,995
JBrowse link
G Gt(ROSA)26Sor gene trap ROSA 26, Philippe Soriano IAGP MGI PMID:20499347 PMID:29621230 NCBI chr 6:113,044,389...113,054,205
Ensembl chr 6:113,043,843...113,054,294
JBrowse link
G Ibsp integrin binding sialoprotein IAGP MGI PMID:18458111 NCBI chr 5:104,447,153...104,459,338
Ensembl chr 5:104,447,037...104,459,335
JBrowse link
G Idua iduronidase, alpha-L IAGP MGI PMID:33905568 NCBI chr 5:108,808,197...108,833,312
Ensembl chr 5:108,808,197...108,832,423
JBrowse link
G Lgals3 lectin, galactose binding, soluble 3 IAGP MGI PMID:36062328 NCBI chr14:47,611,317...47,623,624
Ensembl chr14:47,605,208...47,623,617
JBrowse link
G Lrp4 low density lipoprotein receptor-related protein 4 IAGP MGI PMID:28477420 NCBI chr 2:91,287,794...91,344,246
Ensembl chr 2:91,287,856...91,344,124
JBrowse link
G Mir185 microRNA 185 IAGP MGI PMID:30787286 NCBI chr16:18,145,265...18,145,329
Ensembl chr16:18,145,265...18,145,329
JBrowse link
G Mir188 microRNA 188 IAGP MGI PMID:25751060 NCBI chr  X:7,114,228...7,114,295
Ensembl chr  X:7,114,228...7,114,295
JBrowse link
G Nbr1 NBR1, autophagy cargo receptor IAGP MGI PMID:20616007 NCBI chr11:101,442,933...101,472,777
Ensembl chr11:101,442,975...101,472,777
JBrowse link
G Pcdh7 protocadherin 7 IAGP MGI PMID:32635982 NCBI chr 5:57,873,487...58,290,578
Ensembl chr 5:57,875,309...58,290,572
JBrowse link
G Plekhm1 pleckstrin homology domain containing, family M (with RUN domain) member 1 IAGP MGI PMID:27777970 NCBI chr11:103,255,101...103,303,531
Ensembl chr11:103,255,101...103,303,513
JBrowse link
G Selenow selenoprotein W IAGP MGI PMID:33859201 NCBI chr 7:15,651,133...15,656,296
Ensembl chr 7:15,651,133...15,656,327
JBrowse link
G Sfrp4 secreted frizzled-related protein 4 IAGP MGI PMID:27117872 NCBI chr13:19,807,345...19,816,995
Ensembl chr13:19,807,274...19,817,164
JBrowse link
G Slc24a3 solute carrier family 24 (sodium/potassium/calcium exchanger), member 3 IAGP MGI PMID:28602864 NCBI chr 2:145,009,695...145,484,086
Ensembl chr 2:145,009,674...145,484,086
JBrowse link
G Snx10 sorting nexin 10 IAGP MGI PMID:25811986 PMID:32278070 NCBI chr 6:51,500,882...51,567,659
Ensembl chr 6:51,500,881...51,567,659
JBrowse link
G Socs2 suppressor of cytokine signaling 2 IAGP MGI PMID:18803233 NCBI chr10:95,219,765...95,253,176
Ensembl chr10:95,221,224...95,253,042
JBrowse link
G Spon1 spondin 1, (f-spondin) extracellular matrix protein IAGP MGI PMID:24875054 NCBI chr 7:113,365,235...113,642,610
Ensembl chr 7:113,365,235...113,642,605
JBrowse link
G Sqstm1 sequestosome 1 IAGP MGI PMID:29555685 NCBI chr11:50,090,979...50,105,303
Ensembl chr11:50,090,193...50,101,654
JBrowse link
G Tnfrsf11a tumor necrosis factor receptor superfamily, member 11a, NFKB activator IAGP MGI PMID:33724536 NCBI chr 1:105,708,443...105,777,172
Ensembl chr 1:105,708,443...105,775,709
JBrowse link
G Zfp467 zinc finger protein 467 IAGP MGI PMID:33359894 NCBI chr 6:48,404,626...48,422,926
Ensembl chr 6:48,404,631...48,422,759
JBrowse link
decreased trabecular bone connectivity density term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb4 ATP-binding cassette, sub-family B member 4 IAGP MGI PMID:23545228 NCBI chr 5:8,943,614...9,009,226
Ensembl chr 5:8,943,717...9,009,231
JBrowse link
G Ank progressive ankylosis IAGP MGI PMID:17186460 NCBI chr15:27,466,763...27,594,995
Ensembl chr15:27,466,763...27,594,995
JBrowse link
G Apoe apolipoprotein E IAGP MGI PMID:17259598 NCBI chr 7:19,430,169...19,434,326
Ensembl chr 7:19,430,034...19,433,113
JBrowse link
G Casr calcium-sensing receptor IAGP MGI PMID:18765830 NCBI chr16:36,310,947...36,382,605
Ensembl chr16:36,314,058...36,382,503
JBrowse link
G Chsy1 chondroitin sulfate synthase 1 IEA MGI NCBI chr 7:65,759,240...65,823,546
Ensembl chr 7:65,759,263...65,823,546
JBrowse link
G Cldn18 claudin 18 IAGP MGI PMID:23299504 NCBI chr 9:99,572,849...99,599,320
Ensembl chr 9:99,571,514...99,599,320
JBrowse link
G Clec11a C-type lectin domain family 11, member a IAGP MGI PMID:27976999 NCBI chr 7:43,953,190...43,956,383
Ensembl chr 7:43,952,111...43,956,326
JBrowse link
G Fas Fas cell surface death receptor IAGP MGI PMID:17259598 NCBI chr19:34,267,926...34,305,175
Ensembl chr19:34,268,066...34,305,172
JBrowse link
G Fig4 FIG4 phosphoinositide 5-phosphatase IAGP MGI PMID:23623387 NCBI chr10:41,064,168...41,179,237
Ensembl chr10:41,064,168...41,179,256
JBrowse link
G Gt(ROSA)26Sor gene trap ROSA 26, Philippe Soriano IAGP MGI PMID:29621230 NCBI chr 6:113,044,389...113,054,205
Ensembl chr 6:113,043,843...113,054,294
JBrowse link
G Mecom MDS1 and EVI1 complex locus IAGP MGI PMID:24316420 NCBI chr 3:30,005,445...30,563,937
Ensembl chr 3:30,005,445...30,602,157
JBrowse link
G Mfap2 microfibrillar-associated protein 2 IAGP MGI PMID:23963447 NCBI chr 4:140,737,735...140,743,284
Ensembl chr 4:140,737,729...140,743,295
JBrowse link
G Mfap5 microfibrillar associated protein 5 IAGP MGI PMID:23963447 NCBI chr 6:122,490,543...122,506,249
Ensembl chr 6:122,482,804...122,506,249
JBrowse link
G Mir185 microRNA 185 IAGP MGI PMID:30787286 NCBI chr16:18,145,265...18,145,329
Ensembl chr16:18,145,265...18,145,329
JBrowse link
G Notch2 notch 2 IAGP MGI PMID:26627824 PMID:28592489 NCBI chr 3:97,920,854...98,057,683
Ensembl chr 3:97,920,843...98,057,677
JBrowse link
G Notch3 notch 3 IAGP MGI PMID:30042232 NCBI chr17:32,339,794...32,385,869
Ensembl chr17:32,339,794...32,385,826
JBrowse link
G P3h4 prolyl 3-hydroxylase family member 4 (non-enzymatic) IAGP MGI PMID:27119146 NCBI chr11:100,299,293...100,305,542
Ensembl chr11:100,299,282...100,305,662
JBrowse link
G Smad1 SMAD family member 1 IAGP MGI PMID:21420501 NCBI chr 8:80,065,024...80,126,057
Ensembl chr 8:80,065,024...80,126,147
JBrowse link
G Spop speckle-type BTB/POZ protein IAGP MGI PMID:27930311 NCBI chr11:95,304,909...95,384,236
Ensembl chr11:95,304,906...95,384,232
JBrowse link
G Suco SUN domain containing ossification factor IAGP MGI PMID:20440000 NCBI chr 1:161,643,681...161,704,506
Ensembl chr 1:161,643,683...161,704,251
JBrowse link
G Tmem119 transmembrane protein 119 IAGP MGI PMID:22416756 NCBI chr 5:113,931,790...113,938,457
Ensembl chr 5:113,931,790...113,938,577
JBrowse link
G Wwox WW domain-containing oxidoreductase IAGP MGI PMID:23254685 NCBI chr 8:115,166,377...116,079,451
Ensembl chr 8:115,166,395...116,079,447
JBrowse link
G Zbtb40 zinc finger and BTB domain containing 40 IAGP MGI PMID:32497039 NCBI chr 4:136,707,043...136,776,129
Ensembl chr 4:136,707,043...136,776,112
JBrowse link
decreased trabecular bone mass term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bgn biglycan IAGP MGI PMID:12102052 NCBI chr  X:72,527,207...72,539,542
Ensembl chr  X:72,527,208...72,539,539
JBrowse link
G Cd40 CD40 antigen IAGP MGI PMID:17202317 NCBI chr 2:164,897,535...164,913,574
Ensembl chr 2:164,897,547...164,914,868
JBrowse link
G Cd40lg CD40 ligand IAGP MGI PMID:17202317 NCBI chr  X:56,257,448...56,269,402
Ensembl chr  X:56,257,503...56,269,402
JBrowse link
G Cd44 CD44 antigen IAGP MGI PMID:15781582 NCBI chr 2:102,641,486...102,732,014
Ensembl chr 2:102,641,486...102,732,010
JBrowse link
G Cdk7 cyclin dependent kinase 7 IAGP MGI PMID:22505032 NCBI chr13:100,833,532...100,867,454
Ensembl chr13:100,839,139...100,867,447
JBrowse link
G Cnot3 CCR4-NOT transcription complex, subunit 3 IAGP MGI PMID:24550297 NCBI chr 7:3,646,717...3,664,108
Ensembl chr 7:3,648,267...3,664,108
JBrowse link
G Csta1 cystatin A1 IAGP MGI PMID:37118283 NCBI chr16:35,940,316...35,951,559
Ensembl chr16:35,940,316...35,951,611
JBrowse link
G Cthrc1 collagen triple helix repeat containing 1 IAGP MGI PMID:18779865 NCBI chr15:38,940,327...38,950,516
Ensembl chr15:38,940,327...38,950,516
JBrowse link
G Ctnnb1 catenin beta 1 IAGP MGI PMID:21876000 NCBI chr 9:120,762,466...120,789,573
Ensembl chr 9:120,758,282...120,789,573
JBrowse link
G Dcn decorin IAGP MGI PMID:12102052 NCBI chr10:97,315,362...97,354,025
Ensembl chr10:97,315,471...97,354,005
JBrowse link
G Gja1 gap junction protein, alpha 1 IAGP MGI PMID:18003637 NCBI chr10:56,253,297...56,266,519
Ensembl chr10:56,253,426...56,278,609
JBrowse link
G Gt(ROSA)26Sor gene trap ROSA 26, Philippe Soriano IAGP MGI PMID:29621230 NCBI chr 6:113,044,389...113,054,205
Ensembl chr 6:113,043,843...113,054,294
JBrowse link
G Il10 interleukin 10 IAGP MGI PMID:15362035 NCBI chr 1:130,947,459...130,952,707
Ensembl chr 1:130,947,582...130,952,711
JBrowse link
G Itgb2 integrin beta 2 IAGP MGI PMID:16172402 NCBI chr10:77,366,164...77,401,542
Ensembl chr10:77,366,086...77,401,542
JBrowse link
G Lrp5 low density lipoprotein receptor-related protein 5 IAGP MGI PMID:17147489 PMID:24225945 NCBI chr19:3,634,825...3,736,574
Ensembl chr19:3,634,828...3,736,564
JBrowse link
G Lyz2 lysozyme 2 IAGP MGI PMID:28287403 NCBI chr10:117,113,446...117,118,177
Ensembl chr10:117,113,236...117,118,226
JBrowse link
G Mcph1 microcephaly, primary autosomal recessive 1 IAGP MGI PMID:24652767 NCBI chr 8:18,645,132...18,858,110
Ensembl chr 8:18,645,147...18,853,205
JBrowse link
G Mgp matrix Gla protein IAGP MGI PMID:23994172 NCBI chr 6:136,849,433...136,852,821
Ensembl chr 6:136,849,433...136,852,821
JBrowse link
G Ndor1 NADPH dependent diflavin oxidoreductase 1 IAGP MGI PMID:22505032 NCBI chr 2:25,134,825...25,145,458
Ensembl chr 2:25,134,833...25,146,034
Ensembl chr 2:25,134,833...25,146,034
Ensembl chr 2:25,134,833...25,146,034
JBrowse link
G Nfix nuclear factor I/X IAGP MGI PMID:17353270 NCBI chr 8:85,431,341...85,527,086
Ensembl chr 8:85,426,505...85,526,973
JBrowse link
G Nlrp3 NLR family, pyrin domain containing 3 IAGP MGI PMID:22558291 NCBI chr11:59,432,395...59,457,781
Ensembl chr11:59,432,394...59,457,782
JBrowse link
G P3h1 prolyl 3-hydroxylase 1 IAGP MGI PMID:24465224 NCBI chr 4:119,090,112...119,106,174
Ensembl chr 4:119,090,112...119,106,172
JBrowse link
G Pkd1 polycystin 1, transient receptor potential channel interacting IAGP MGI PMID:23064367 NCBI chr17:24,767,657...24,815,457
Ensembl chr17:24,768,808...24,815,482
JBrowse link
G Pparg peroxisome proliferator activated receptor gamma IAGP MGI PMID:21876000 NCBI chr 6:115,337,828...115,467,365
Ensembl chr 6:115,337,912...115,467,360
JBrowse link
G Rnf146 ring finger protein 146 IAGP MGI PMID:28287403 NCBI chr10:29,220,172...29,238,438
Ensembl chr10:29,220,172...29,238,438
JBrowse link
G Spop speckle-type BTB/POZ protein IAGP MGI PMID:27930311 NCBI chr11:95,304,909...95,384,236
Ensembl chr11:95,304,906...95,384,232
JBrowse link
G Spry2 sprouty RTK signaling antagonist 2 IAGP MGI PMID:34423857 NCBI chr14:106,129,381...106,134,559
Ensembl chr14:106,129,381...106,134,253
JBrowse link
G Terc telomerase RNA component IAGP MGI PMID:15235603 NCBI chr 3:96,321,753...96,322,149
Ensembl chr 3:96,321,753...96,322,149
JBrowse link
G Tle4 transducin-like enhancer of split 4 IAGP MGI PMID:25153823 NCBI chr19:14,425,434...14,575,542
Ensembl chr19:14,425,514...14,575,415
JBrowse link
G Tmem178 transmembrane protein 178 IAGP MGI PMID:26644563 NCBI chr17:81,252,061...81,309,245
Ensembl chr17:81,252,061...81,309,245
JBrowse link
G Tnfrsf11b tumor necrosis factor receptor superfamily, member 11b (osteoprotegerin) IAGP MGI PMID:9573043 NCBI chr15:54,114,014...54,141,700
Ensembl chr15:54,114,015...54,141,880
JBrowse link
G Tnni2 troponin I, skeletal, fast 2 IAGP MGI PMID:25340332 NCBI chr 7:141,995,553...141,998,147
Ensembl chr 7:141,995,545...141,998,147
JBrowse link
G Wnt4 wingless-type MMTV integration site family, member 4 IAGP MGI PMID:32497039 NCBI chr 4:137,004,946...137,026,812
Ensembl chr 4:137,004,800...137,027,037
JBrowse link
G Wrn Werner syndrome RecQ like helicase IAGP MGI PMID:15235603 NCBI chr 8:33,724,400...33,875,591
Ensembl chr 8:33,724,412...33,875,555
JBrowse link
G Zbtb40 zinc finger and BTB domain containing 40 IAGP MGI PMID:32497039 NCBI chr 4:136,707,043...136,776,129
Ensembl chr 4:136,707,043...136,776,112
JBrowse link
decreased trabecular bone thickness term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adam17 a disintegrin and metallopeptidase domain 17 IAGP MGI PMID:19201862 NCBI chr12:21,373,510...21,423,633
Ensembl chr12:21,373,510...21,423,633
JBrowse link
G Akr1a1 aldo-keto reductase family 1, member A1 IAGP MGI PMID:20410296 NCBI chr 4:116,493,707...116,508,871
Ensembl chr 4:116,493,707...116,508,877
JBrowse link
G Alpl alkaline phosphatase, liver/bone/kidney IAGP MGI PMID:25716980 NCBI chr 4:137,469,042...137,523,695
Ensembl chr 4:137,469,044...137,523,695
JBrowse link
G Ano5 anoctamin 5 IAGP MGI PMID:30712070 PMID:34841576 NCBI chr 7:51,160,668...51,248,459
Ensembl chr 7:51,160,777...51,248,457
JBrowse link
G Apoe apolipoprotein E IAGP MGI PMID:17259598 NCBI chr 7:19,430,169...19,434,326
Ensembl chr 7:19,430,034...19,433,113
JBrowse link
G Atp6v1h ATPase, H+ transporting, lysosomal V1 subunit H IAGP MGI PMID:27924156 NCBI chr 1:5,153,201...5,233,438
Ensembl chr 1:5,140,241...5,232,752
JBrowse link
G Bmp2 bone morphogenetic protein 2 IAGP MGI PMID:23843612 NCBI chr 2:133,394,079...133,404,816
Ensembl chr 2:133,394,079...133,404,805
JBrowse link
G Casp3 caspase 3 IAGP MGI PMID:15599395 NCBI chr 8:47,070,326...47,092,733
Ensembl chr 8:47,070,326...47,092,724
JBrowse link
G Casr calcium-sensing receptor IAGP MGI PMID:18765830 NCBI chr16:36,310,947...36,382,605
Ensembl chr16:36,314,058...36,382,503
JBrowse link
G Ccn2 cellular communication network factor 2 IAGP MGI PMID:12736220 NCBI chr10:24,471,340...24,474,581
Ensembl chr10:24,471,340...24,474,581
JBrowse link
G Cebpb CCAAT/enhancer binding protein beta IAGP MGI PMID:19440205 NCBI chr 2:167,530,835...167,532,352
Ensembl chr 2:167,530,835...167,532,338
JBrowse link
G Chd7 chromodomain helicase DNA binding protein 7 IAGP MGI PMID:35418650 NCBI chr 4:8,690,345...8,868,449
Ensembl chr 4:8,690,406...8,867,659
JBrowse link
G Chsy1 chondroitin sulfate synthase 1 IEA MGI NCBI chr 7:65,759,240...65,823,546
Ensembl chr 7:65,759,263...65,823,546
JBrowse link
G Cisd2 CDGSH iron sulfur domain 2 IAGP MGI PMID:19451219 NCBI chr 3:135,112,173...135,129,194
Ensembl chr 3:135,112,173...135,129,686
JBrowse link
G Cldn18 claudin 18 IAGP MGI PMID:23299504 NCBI chr 9:99,572,849...99,599,320
Ensembl chr 9:99,571,514...99,599,320
JBrowse link
G Clec11a C-type lectin domain family 11, member a IAGP MGI PMID:27976999 NCBI chr 7:43,953,190...43,956,383
Ensembl chr 7:43,952,111...43,956,326
JBrowse link
G Clec2d C-type lectin domain family 2, member d IAGP MGI PMID:18782774 NCBI chr 6:129,157,578...129,163,498
Ensembl chr 6:129,157,578...129,163,497
JBrowse link
G Cnot3 CCR4-NOT transcription complex, subunit 3 IAGP MGI PMID:24550297 NCBI chr 7:3,646,717...3,664,108
Ensembl chr 7:3,648,267...3,664,108
JBrowse link
G Creb3l1 cAMP responsive element binding protein 3-like 1 IAGP MGI PMID:19767743 NCBI chr 2:91,812,673...91,854,515
Ensembl chr 2:91,812,673...91,854,847
JBrowse link
G Csf1 colony stimulating factor 1 (macrophage) IAGP MGI PMID:21958845 NCBI chr 3:107,648,364...107,668,048
Ensembl chr 3:107,648,364...107,667,785
JBrowse link
G Cthrc1 collagen triple helix repeat containing 1 IAGP MGI PMID:23908115 NCBI chr15:38,940,327...38,950,516
Ensembl chr15:38,940,327...38,950,516
JBrowse link
G Ctnnb1 catenin beta 1 IAGP MGI PMID:21876000 NCBI chr 9:120,762,466...120,789,573
Ensembl chr 9:120,758,282...120,789,573
JBrowse link
G Ctsk cathepsin K IAGP MGI PMID:23908115 NCBI chr 3:95,406,521...95,416,698
Ensembl chr 3:95,406,567...95,416,673
JBrowse link
G Dpp3 dipeptidylpeptidase 3 IAGP MGI PMID:31295380 NCBI chr19:4,957,257...4,978,315
Ensembl chr19:4,957,257...4,978,315
JBrowse link
G Fam20c FAM20C, golgi associated secretory pathway kinase IAGP MGI PMID:22732358 NCBI chr 5:138,740,836...138,795,818
Ensembl chr 5:138,740,269...138,795,832
JBrowse link
G Fas Fas cell surface death receptor IAGP MGI PMID:17259598 NCBI chr19:34,267,926...34,305,175
Ensembl chr19:34,268,066...34,305,172
JBrowse link
G Fbn1 fibrillin 1 IAGP MGI PMID:22374917 NCBI chr 2:125,142,514...125,348,417
Ensembl chr 2:125,142,514...125,349,913
JBrowse link
G Fgfr3 fibroblast growth factor receptor 3 IAGP MGI PMID:28230213 PMID:37345656 NCBI chr 5:33,879,068...33,894,412
Ensembl chr 5:33,879,018...33,894,412
JBrowse link
G Fosl2 fos-like antigen 2 IAGP MGI PMID:24046454 NCBI chr 5:32,292,599...32,315,184
Ensembl chr 5:32,293,145...32,315,186
JBrowse link
G Gas5 growth arrest specific 5 IAGP MGI PMID:33006314 NCBI chr 1:160,862,171...160,866,109
Ensembl chr 1:160,861,992...160,866,116
JBrowse link
G Hfe homeostatic iron regulator IAGP MGI PMID:20976594 NCBI chr13:23,886,017...23,894,837
Ensembl chr13:23,886,017...23,894,837
JBrowse link
G Hgs HGF-regulated tyrosine kinase substrate IAGP MGI PMID:6024256 NCBI chr11:120,358,431...120,374,810
Ensembl chr11:120,358,461...120,374,805
JBrowse link
G Ibsp integrin binding sialoprotein IAGP MGI PMID:18458111 NCBI chr 5:104,447,153...104,459,338
Ensembl chr 5:104,447,037...104,459,335
JBrowse link
G Id1 inhibitor of DNA binding 1, HLH protein IAGP MGI PMID:19956687 NCBI chr 2:152,578,171...152,579,330
Ensembl chr 2:152,578,171...152,579,330
JBrowse link
G Idh2 isocitrate dehydrogenase 2 (NADP+), mitochondrial IAGP MGI PMID:29527922 NCBI chr 7:79,744,594...79,768,356
Ensembl chr 7:79,744,594...79,765,140
JBrowse link
G Ifngr1 interferon gamma receptor 1 IAGP MGI PMID:21308779 NCBI chr10:19,467,697...19,485,977
Ensembl chr10:19,467,697...19,485,977
JBrowse link
G Igf1r insulin-like growth factor I receptor IAGP MGI PMID:12215457 NCBI chr 7:67,601,486...67,883,416
Ensembl chr 7:67,602,575...67,883,416
JBrowse link
G Ighm immunoglobulin heavy constant mu IAGP MGI PMID:17202317 NCBI chr12:113,382,446...113,386,350
Ensembl chr12:113,382,178...113,386,350
JBrowse link
G Il10 interleukin 10 IAGP MGI PMID:15362035 NCBI chr 1:130,947,459...130,952,707
Ensembl chr 1:130,947,582...130,952,711
JBrowse link
G Il6st interleukin 6 signal transducer IAGP MGI PMID:14755335 NCBI chr13:112,600,604...112,643,394
Ensembl chr13:112,600,604...112,646,620
JBrowse link
G Inpp5d inositol polyphosphate-5-phosphatase D IAGP MGI PMID:12161749 NCBI chr 1:87,548,034...87,648,232
Ensembl chr 1:87,548,034...87,648,229
JBrowse link
G Irs1 insulin receptor substrate 1 IAGP MGI PMID:20032200 NCBI chr 1:82,210,826...82,269,160
Ensembl chr 1:82,210,822...82,269,137
JBrowse link
G Itln1 intelectin 1 (galactofuranose binding) IAGP MGI PMID:29619269 NCBI chr 1:171,345,691...171,362,893
Ensembl chr 1:171,345,690...171,362,862
JBrowse link
G Lmna lamin A IAGP MGI PMID:32128409 NCBI chr 3:88,388,455...88,413,842
Ensembl chr 3:88,387,454...88,417,263
JBrowse link
G Mecom MDS1 and EVI1 complex locus IAGP MGI PMID:24316420 NCBI chr 3:30,005,445...30,563,937
Ensembl chr 3:30,005,445...30,602,157
JBrowse link
G Mfap2 microfibrillar-associated protein 2 IAGP MGI PMID:23963447 NCBI chr 4:140,737,735...140,743,284
Ensembl chr 4:140,737,729...140,743,295
JBrowse link
G Mfap5 microfibrillar associated protein 5 IAGP MGI PMID:23963447 NCBI chr 6:122,490,543...122,506,249
Ensembl chr 6:122,482,804...122,506,249
JBrowse link
G Mgp matrix Gla protein IAGP MGI PMID:23994172 NCBI chr 6:136,849,433...136,852,821
Ensembl chr 6:136,849,433...136,852,821
JBrowse link
G Naca nascent polypeptide-associated complex alpha polypeptide IAGP MGI PMID:19884350 NCBI chr10:127,869,144...127,884,506
Ensembl chr10:127,871,444...127,884,506
JBrowse link
G Nfix nuclear factor I/X IAGP MGI PMID:17353270 NCBI chr 8:85,431,341...85,527,086
Ensembl chr 8:85,426,505...85,526,973
JBrowse link
G Nlrp3 NLR family, pyrin domain containing 3 IAGP MGI PMID:22558291 NCBI chr11:59,432,395...59,457,781
Ensembl chr11:59,432,394...59,457,782
JBrowse link
G Notch2 notch 2 IAGP MGI PMID:26627824 PMID:28592489 PMID:28856714 NCBI chr 3:97,920,854...98,057,683
Ensembl chr 3:97,920,843...98,057,677
JBrowse link
G Nppc natriuretic peptide type C IAGP MGI PMID:22271248 NCBI chr 1:86,594,015...86,598,295
Ensembl chr 1:86,594,013...86,598,293
JBrowse link
G P3h1 prolyl 3-hydroxylase 1 IAGP MGI PMID:24465224 NCBI chr 4:119,090,112...119,106,174
Ensembl chr 4:119,090,112...119,106,172
JBrowse link
G Pparg peroxisome proliferator activated receptor gamma IAGP MGI PMID:21876000 NCBI chr 6:115,337,828...115,467,365
Ensembl chr 6:115,337,912...115,467,360
JBrowse link
G Ppib peptidylprolyl isomerase B IAGP MGI PMID:24968150 NCBI chr 9:65,967,451...65,973,911
Ensembl chr 9:65,967,504...65,973,905
JBrowse link
G Prkaca protein kinase, cAMP dependent, catalytic, alpha IAGP MGI PMID:20421483 NCBI chr 8:84,699,607...84,723,073
Ensembl chr 8:84,699,622...84,723,072
JBrowse link
G Rassf2 Ras association (RalGDS/AF-6) domain family member 2 IAGP MGI PMID:22227519 NCBI chr 2:131,834,770...131,872,336
Ensembl chr 2:131,831,335...131,872,178
JBrowse link
G Runx2 runt related transcription factor 2 IAGP MGI PMID:25244033 NCBI chr17:44,806,873...45,125,518
Ensembl chr17:44,806,874...45,125,684
JBrowse link
G Runx3 runt related transcription factor 3 IAGP MGI PMID:25605327 NCBI chr 4:134,847,956...134,905,301
Ensembl chr 4:134,847,963...134,905,301
JBrowse link
G Scube2 signal peptide, CUB domain, EGF-like 2 IAGP MGI PMID:25639508 NCBI chr 7:109,397,897...109,464,886
Ensembl chr 7:109,397,883...109,464,886
JBrowse link
G Slc10a7 solute carrier family 10 (sodium/bile acid cotransporter family), member 7 IAGP MGI PMID:30082715 NCBI chr 8:79,235,957...79,460,641
Ensembl chr 8:79,235,975...79,460,632
JBrowse link
G Smad1 SMAD family member 1 IAGP MGI PMID:21420501 NCBI chr 8:80,065,024...80,126,057
Ensembl chr 8:80,065,024...80,126,147
JBrowse link
G Sox9 SRY (sex determining region Y)-box 9 IAGP MGI PMID:19201862 NCBI chr11:112,673,036...112,678,583
Ensembl chr11:112,673,050...112,678,586
JBrowse link
G Spop speckle-type BTB/POZ protein IAGP MGI PMID:27930311 NCBI chr11:95,304,909...95,384,236
Ensembl chr11:95,304,906...95,384,232
JBrowse link
G Stat3 signal transducer and activator of transcription 3 IAGP MGI PMID:16679075 NCBI chr11:100,777,632...100,830,447
Ensembl chr11:100,775,924...100,830,366
JBrowse link
G Suco SUN domain containing ossification factor IAGP MGI PMID:20440000 NCBI chr 1:161,643,681...161,704,506
Ensembl chr 1:161,643,683...161,704,251
JBrowse link
G Terc telomerase RNA component IAGP MGI PMID:24626990 NCBI chr 3:96,321,753...96,322,149
Ensembl chr 3:96,321,753...96,322,149
JBrowse link
G Thra thyroid hormone receptor alpha IAGP MGI PMID:29205102 NCBI chr11:98,631,539...98,659,832
Ensembl chr11:98,631,464...98,659,832
JBrowse link
G Thrb thyroid hormone receptor beta IAGP MGI PMID:17327419 NCBI chr14:4,429,599...4,810,538
Ensembl chr14:4,431,611...4,809,435
JBrowse link
G Tmem178 transmembrane protein 178 IAGP MGI PMID:26644563 NCBI chr17:81,252,061...81,309,245
Ensembl chr17:81,252,061...81,309,245
JBrowse link
G Tmem263 transmembrane protein 263 IAGP MGI PMID:38241182 NCBI chr10:84,938,491...84,953,611
Ensembl chr10:84,938,491...84,956,482
JBrowse link
G Trpv5 transient receptor potential cation channel, subfamily V, member 5 IAGP MGI PMID:14679186 PMID:23383183 NCBI chr 6:41,628,595...41,658,158
Ensembl chr 6:41,629,107...41,657,703
JBrowse link
G Usp34 ubiquitin specific peptidase 34 IAGP MGI PMID:30181118 NCBI chr11:23,256,433...23,440,560
Ensembl chr11:23,256,895...23,440,560
JBrowse link
G Wrn Werner syndrome RecQ like helicase IAGP MGI PMID:24626990 NCBI chr 8:33,724,400...33,875,591
Ensembl chr 8:33,724,412...33,875,555
JBrowse link
G Wwox WW domain-containing oxidoreductase IAGP MGI PMID:19936220 NCBI chr 8:115,166,377...116,079,451
Ensembl chr 8:115,166,395...116,079,447
JBrowse link
G Zfp467 zinc finger protein 467 IAGP MGI PMID:33359894 NCBI chr 6:48,404,626...48,422,926
Ensembl chr 6:48,404,631...48,422,759
JBrowse link
decreased trabecular bone volume term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ackr1 atypical chemokine receptor 1 (Duffy blood group) IAGP MGI PMID:17416748 NCBI chr 1:173,159,457...173,161,079
Ensembl chr 1:173,159,453...173,161,317
JBrowse link
G Adipoq adiponectin, C1Q and collagen domain containing IAGP MGI PMID:23684624 NCBI chr16:22,965,286...22,976,718
Ensembl chr16:22,965,286...22,976,778
JBrowse link
G Ank progressive ankylosis IAGP MGI PMID:17186460 NCBI chr15:27,466,763...27,594,995
Ensembl chr15:27,466,763...27,594,995
JBrowse link
G Apoe apolipoprotein E IAGP MGI PMID:17259598 NCBI chr 7:19,430,169...19,434,326
Ensembl chr 7:19,430,034...19,433,113
JBrowse link
G Bbln bublin coiled coil protein IAGP MGI PMID:32569872 NCBI chr 2:32,269,120...32,271,877
Ensembl chr 2:32,267,109...32,271,950
JBrowse link
G Bmncr bone marrow associated noncoding RNA IAGP MGI PMID:30352426 NCBI chr 1:133,905,026...133,934,187
Ensembl chr 1:133,905,262...133,918,369
JBrowse link
G Bmp2 bone morphogenetic protein 2 IAGP MGI PMID:23843612 NCBI chr 2:133,394,079...133,404,816
Ensembl chr 2:133,394,079...133,404,805
JBrowse link
G Casr calcium-sensing receptor IAGP MGI PMID:18765830 NCBI chr16:36,310,947...36,382,605
Ensembl chr16:36,314,058...36,382,503
JBrowse link
G Cd44 CD44 antigen IAGP MGI PMID:15781582 NCBI chr 2:102,641,486...102,732,014
Ensembl chr 2:102,641,486...102,732,010
JBrowse link
G Chsy1 chondroitin sulfate synthase 1 IEA MGI NCBI chr 7:65,759,240...65,823,546
Ensembl chr 7:65,759,263...65,823,546
JBrowse link
G Ciita class II transactivator IAGP MGI PMID:24038328 NCBI chr16:10,297,877...10,348,928
Ensembl chr16:10,297,923...10,346,282
JBrowse link
G Cldn18 claudin 18 IAGP MGI PMID:23299504 NCBI chr 9:99,572,849...99,599,320
Ensembl chr 9:99,571,514...99,599,320
JBrowse link
G Clec11a C-type lectin domain family 11, member a IAGP MGI PMID:27976999 NCBI chr 7:43,953,190...43,956,383
Ensembl chr 7:43,952,111...43,956,326
JBrowse link
G Clec2d C-type lectin domain family 2, member d IAGP MGI PMID:18782774 NCBI chr 6:129,157,578...129,163,498
Ensembl chr 6:129,157,578...129,163,497
JBrowse link
G Col2a1 collagen, type II, alpha 1 IAGP MGI PMID:22028304 NCBI chr15:97,873,483...97,902,525
Ensembl chr15:97,873,483...97,902,576
JBrowse link
G Cst5 cystatin D IAGP MGI PMID:16680148 NCBI chr 2:149,247,242...149,252,217
Ensembl chr 2:149,246,977...149,252,213
JBrowse link
G Ctnnb1 catenin beta 1 IAGP MGI PMID:21876000 NCBI chr 9:120,762,466...120,789,573
Ensembl chr 9:120,758,282...120,789,573
JBrowse link
G Ctsk cathepsin K IAGP MGI PMID:21876000 NCBI chr 3:95,406,521...95,416,698
Ensembl chr 3:95,406,567...95,416,673
JBrowse link
G Epas1 endothelial PAS domain protein 1 IAGP MGI PMID:22464323 NCBI chr17:87,061,292...87,140,838
Ensembl chr17:87,061,128...87,140,838
JBrowse link
G Evc2 EvC ciliary complex subunit 2 IAGP MGI PMID:26219237 NCBI chr 5:37,495,801...37,582,399
Ensembl chr 5:37,495,843...37,582,399
JBrowse link
G Fam20c FAM20C, golgi associated secretory pathway kinase IAGP MGI PMID:22732358 NCBI chr 5:138,740,836...138,795,818
Ensembl chr 5:138,740,269...138,795,832
JBrowse link
G Fam210a family with sequence similarity 210, member A IAGP MGI PMID:29618611 NCBI chr18:68,393,248...68,433,404
Ensembl chr18:68,393,258...68,433,404
JBrowse link
G Fas Fas cell surface death receptor IAGP MGI PMID:17259598 NCBI chr19:34,267,926...34,305,175
Ensembl chr19:34,268,066...34,305,172
JBrowse link
G Fermt2 fermitin family member 2 IAGP MGI PMID:26151572 NCBI chr14:45,696,252...45,767,767
Ensembl chr14:45,696,252...45,767,575
JBrowse link
G Fgfr3 fibroblast growth factor receptor 3 IAGP MGI PMID:28230213 NCBI chr 5:33,879,068...33,894,412
Ensembl chr 5:33,879,018...33,894,412
JBrowse link
G Fig4 FIG4 phosphoinositide 5-phosphatase IAGP MGI PMID:23623387 NCBI chr10:41,064,168...41,179,237
Ensembl chr10:41,064,168...41,179,256
JBrowse link
G Fzd9 frizzled class receptor 9 IAGP MGI PMID:21402791 NCBI chr 5:135,277,792...135,279,901
Ensembl chr 5:135,277,792...135,280,084
JBrowse link
G Gnptab N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits IAGP MGI PMID:24127423 NCBI chr10:88,215,130...88,283,186
Ensembl chr10:88,214,994...88,283,191
JBrowse link
G Gpr65 G-protein coupled receptor 65 IAGP MGI PMID:24221084 NCBI chr12:98,234,894...98,242,981
Ensembl chr12:98,234,894...98,242,903
JBrowse link
G Gt(ROSA)26Sor gene trap ROSA 26, Philippe Soriano IAGP MGI PMID:22792209 PMID:24497849 PMID:29621230 NCBI chr 6:113,044,389...113,054,205
Ensembl chr 6:113,043,843...113,054,294
JBrowse link
G Hfe homeostatic iron regulator IAGP MGI PMID:20976594 NCBI chr13:23,886,017...23,894,837
Ensembl chr13:23,886,017...23,894,837
JBrowse link
G Hif1a hypoxia inducible factor 1, alpha subunit IAGP MGI PMID:22464323 NCBI chr12:73,948,186...73,994,304
Ensembl chr12:73,948,149...73,994,304
JBrowse link
G Idh2 isocitrate dehydrogenase 2 (NADP+), mitochondrial IAGP MGI PMID:29527922 NCBI chr 7:79,744,594...79,768,356
Ensembl chr 7:79,744,594...79,765,140
JBrowse link
G Ifitm5 interferon induced transmembrane protein 5 IAGP MGI PMID:28880886 NCBI chr 7:140,528,871...140,530,156
Ensembl chr 7:140,528,871...140,530,204
JBrowse link
G Igf1r insulin-like growth factor I receptor IAGP MGI PMID:12215457 NCBI chr 7:67,601,486...67,883,416
Ensembl chr 7:67,602,575...67,883,416
JBrowse link
G Inpp5d inositol polyphosphate-5-phosphatase D IAGP MGI PMID:12161749 NCBI chr 1:87,548,034...87,648,232
Ensembl chr 1:87,548,034...87,648,229
JBrowse link
G Irak3 interleukin-1 receptor-associated kinase 3 IAGP MGI PMID:15809356 NCBI chr10:119,977,553...120,038,035
Ensembl chr10:119,977,553...120,038,035
JBrowse link
G Isg15 ISG15 ubiquitin-like modifier IAGP MGI PMID:21402791 NCBI chr 4:156,283,881...156,285,275
Ensembl chr 4:156,283,912...156,285,253
JBrowse link
G Itln1 intelectin 1 (galactofuranose binding) IAGP MGI PMID:29619269 NCBI chr 1:171,345,691...171,362,893
Ensembl chr 1:171,345,690...171,362,862
JBrowse link
G Kitl kit ligand IAGP MGI PMID:15765184 NCBI chr10:99,851,477...99,936,278
Ensembl chr10:99,851,492...99,936,278
JBrowse link
G Klf10 Kruppel-like transcription factor 10 IAGP MGI PMID:16876494 NCBI chr15:38,291,702...38,300,950
Ensembl chr15:38,291,707...38,300,950
JBrowse link
G Lmna lamin A IAGP MGI PMID:32128409 NCBI chr 3:88,388,455...88,413,842
Ensembl chr 3:88,387,454...88,417,263
JBrowse link
G Lyz2 lysozyme 2 IAGP MGI PMID:21876000 PMID:28287403 NCBI chr10:117,113,446...117,118,177
Ensembl chr10:117,113,236...117,118,226
JBrowse link
G Mbtps1 membrane-bound transcription factor peptidase, site 1 IAGP MGI PMID:29437042 NCBI chr 8:120,234,890...120,285,603
Ensembl chr 8:120,234,895...120,285,474
JBrowse link
G Mcph1 microcephaly, primary autosomal recessive 1 IAGP MGI PMID:24652767 NCBI chr 8:18,645,132...18,858,110
Ensembl chr 8:18,645,147...18,853,205
JBrowse link
G Mecom MDS1 and EVI1 complex locus IAGP MGI PMID:24316420 NCBI chr 3:30,005,445...30,563,937
Ensembl chr 3:30,005,445...30,602,157
JBrowse link
G Mfap2 microfibrillar-associated protein 2 IAGP MGI PMID:27445989 NCBI chr 4:140,737,735...140,743,284
Ensembl chr 4:140,737,729...140,743,295
JBrowse link
G Notch2 notch 2 IAGP MGI PMID:26627824 PMID:28592489 PMID:28856714 NCBI chr 3:97,920,854...98,057,683
Ensembl chr 3:97,920,843...98,057,677
JBrowse link
G Notch3 notch 3 IAGP MGI PMID:30042232 NCBI chr17:32,339,794...32,385,869
Ensembl chr17:32,339,794...32,385,826
JBrowse link
G P3h1 prolyl 3-hydroxylase 1 IAGP MGI PMID:24465224 NCBI chr 4:119,090,112...119,106,174
Ensembl chr 4:119,090,112...119,106,172
JBrowse link
G P3h4 prolyl 3-hydroxylase family member 4 (non-enzymatic) IAGP MGI PMID:27119146 NCBI chr11:100,299,293...100,305,542
Ensembl chr11:100,299,282...100,305,662
JBrowse link
G Pdia3 protein disulfide isomerase associated 3 IAGP MGI PMID:20576531 NCBI chr 2:121,244,383...121,269,168
Ensembl chr 2:121,244,256...121,269,168
JBrowse link
G Pkd1 polycystin 1, transient receptor potential channel interacting IAGP MGI PMID:23029375 NCBI chr17:24,767,657...24,815,457
Ensembl chr17:24,768,808...24,815,482
JBrowse link
G Postn periostin, osteoblast specific factor IAGP MGI PMID:23505553 NCBI chr 3:54,266,688...54,298,462
Ensembl chr 3:54,268,530...54,298,458
JBrowse link
G Pparg peroxisome proliferator activated receptor gamma IAGP MGI PMID:21876000 NCBI chr 6:115,337,828...115,467,365
Ensembl chr 6:115,337,912...115,467,360
JBrowse link
G Ppib peptidylprolyl isomerase B IAGP MGI PMID:19997487 PMID:24968150 NCBI chr 9:65,967,451...65,973,911
Ensembl chr 9:65,967,504...65,973,905
JBrowse link
G Prdm5 PR domain containing 5 IAGP MGI PMID:22589746 NCBI chr 6:65,754,640...65,914,606
Ensembl chr 6:65,755,972...65,913,994
JBrowse link
G Prmt5 protein arginine N-methyltransferase 5 IAGP MGI PMID:31848143 NCBI chr14:54,744,639...54,754,927
Ensembl chr14:54,744,644...54,754,982
JBrowse link
G Ptpn2 protein tyrosine phosphatase, non-receptor type 2 IAGP MGI PMID:22000926 NCBI chr18:67,798,571...67,857,697
Ensembl chr18:67,798,581...67,857,665
JBrowse link
G Rassf2 Ras association (RalGDS/AF-6) domain family member 2 IAGP MGI PMID:22227519 NCBI chr 2:131,834,770...131,872,336
Ensembl chr 2:131,831,335...131,872,178
JBrowse link
G Rnf146 ring finger protein 146 IAGP MGI PMID:28287403 PMID:28581440 NCBI chr10:29,220,172...29,238,438
Ensembl chr10:29,220,172...29,238,438
JBrowse link
G Ror2 receptor tyrosine kinase-like orphan receptor 2 IAGP MGI PMID:18353862 NCBI chr13:53,263,353...53,440,160
Ensembl chr13:53,263,348...53,440,160
JBrowse link
G Runx3 runt related transcription factor 3 IAGP MGI PMID:25605327 NCBI chr 4:134,847,956...134,905,301
Ensembl chr 4:134,847,963...134,905,301
JBrowse link
G Scube2 signal peptide, CUB domain, EGF-like 2 IAGP MGI PMID:25639508 NCBI chr 7:109,397,897...109,464,886
Ensembl chr 7:109,397,883...109,464,886
JBrowse link
G Serpinf1 serine (or cysteine) peptidase inhibitor, clade F, member 1 IAGP MGI PMID:23413146 NCBI chr11:75,300,855...75,313,449
Ensembl chr11:75,300,595...75,313,527
JBrowse link
G Sh3bp2 SH3-domain binding protein 2 IAGP MGI PMID:17218256 NCBI chr 5:34,683,128...34,720,983
Ensembl chr 5:34,683,182...34,720,985
JBrowse link
G Slc10a7 solute carrier family 10 (sodium/bile acid cotransporter family), member 7 IAGP MGI PMID:30082715 NCBI chr 8:79,235,957...79,460,641
Ensembl chr 8:79,235,975...79,460,632
JBrowse link
G Smad1 SMAD family member 1 IAGP MGI PMID:21420501 NCBI chr 8:80,065,024...80,126,057
Ensembl chr 8:80,065,024...80,126,147
JBrowse link
G Tmem119 transmembrane protein 119 IAGP MGI PMID:22416756 NCBI chr 5:113,931,790...113,938,457
Ensembl chr 5:113,931,790...113,938,577
JBrowse link
G Tmem178 transmembrane protein 178 IAGP MGI PMID:26644563 NCBI chr17:81,252,061...81,309,245
Ensembl chr17:81,252,061...81,309,245
JBrowse link
G Tmem263 transmembrane protein 263 IAGP MGI PMID:38241182 NCBI chr10:84,938,491...84,953,611
Ensembl chr10:84,938,491...84,956,482
JBrowse link
G Tnfsf14 tumor necrosis factor (ligand) superfamily, member 14 IAGP MGI PMID:29178458 NCBI chr17:57,496,437...57,501,182
Ensembl chr17:57,496,492...57,501,177
JBrowse link
G Twsg1 twisted gastrulation BMP signaling modulator 1 IAGP MGI PMID:16934545 NCBI chr17:66,230,060...66,258,198
Ensembl chr17:66,228,967...66,258,221
JBrowse link
G Vhl von Hippel-Lindau tumor suppressor IAGP MGI PMID:22464323 NCBI chr 6:113,600,955...113,608,595
Ensembl chr 6:113,600,920...113,608,594
JBrowse link
G Wwox WW domain-containing oxidoreductase IAGP MGI PMID:19936220 PMID:23254685 NCBI chr 8:115,166,377...116,079,451
Ensembl chr 8:115,166,395...116,079,447
JBrowse link
G Zbtb40 zinc finger and BTB domain containing 40 IAGP MGI PMID:32497039 NCBI chr 4:136,707,043...136,776,129
Ensembl chr 4:136,707,043...136,776,112
JBrowse link
increased bone trabecula number term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agtr2 angiotensin II receptor, type 2 IAGP MGI PMID:19004830 NCBI chr  X:21,350,863...21,355,072
Ensembl chr  X:21,350,783...21,355,403
JBrowse link
G Alpl alkaline phosphatase, liver/bone/kidney IAGP MGI PMID:16939396 PMID:25716980 NCBI chr 4:137,469,042...137,523,695
Ensembl chr 4:137,469,044...137,523,695
JBrowse link
G Apoe apolipoprotein E IAGP MGI PMID:15647822 NCBI chr 7:19,430,169...19,434,326
Ensembl chr 7:19,430,034...19,433,113
JBrowse link
G Cav1 caveolin 1, caveolae protein IAGP MGI PMID:17550335 NCBI chr 6:17,306,387...17,341,323
Ensembl chr 6:17,306,334...17,341,451
JBrowse link
G Cd68 CD68 antigen IAGP MGI PMID:21991369 NCBI chr11:69,555,039...69,556,996
Ensembl chr11:69,555,039...69,556,979
JBrowse link
G Cebpb CCAAT/enhancer binding protein beta IAGP MGI PMID:19440205 NCBI chr 2:167,530,835...167,532,352
Ensembl chr 2:167,530,835...167,532,338
JBrowse link
G Clcn7 chloride channel, voltage-sensitive 7 IAGP MGI PMID:24185277 PMID:27746321 PMID:28942122 NCBI chr17:25,352,353...25,381,077
Ensembl chr17:25,352,365...25,381,078
JBrowse link
G Csf1 colony stimulating factor 1 (macrophage) IAGP MGI PMID:1887865 PMID:11756160 PMID:21958845 NCBI chr 3:107,648,364...107,668,048
Ensembl chr 3:107,648,364...107,667,785
JBrowse link
G Ctnnb1 catenin beta 1 IAGP MGI PMID:21876000 NCBI chr 9:120,762,466...120,789,573
Ensembl chr 9:120,758,282...120,789,573
JBrowse link
G Ctsk cathepsin K IAGP MGI PMID:16753017 PMID:23321671 PMID:23341620 PMID:27777970 NCBI chr 3:95,406,521...95,416,698
Ensembl chr 3:95,406,567...95,416,673
JBrowse link
G Cxxc5 CXXC finger 5 IAGP MGI PMID:25633194 NCBI chr18:35,962,432...35,994,746
Ensembl chr18:35,962,450...35,994,741
JBrowse link
G Dmp1 dentin matrix protein 1 IAGP MGI PMID:21542006 NCBI chr 5:104,345,441...104,361,968
Ensembl chr 5:104,350,479...104,361,968
JBrowse link
G F2r coagulation factor II thrombin receptor IAGP MGI PMID:25460576 NCBI chr13:95,738,288...95,754,974
Ensembl chr13:95,738,311...95,754,995
JBrowse link
G Farp2 FERM, RhoGEF and pleckstrin domain protein 2 IAGP MGI PMID:20702777 NCBI chr 1:93,439,826...93,549,698
Ensembl chr 1:93,439,801...93,549,698
JBrowse link
G Galnt3 polypeptide N-acetylgalactosaminyltransferase 3 IAGP MGI PMID:22912827 NCBI chr 2:65,913,110...65,955,217
Ensembl chr 2:65,913,110...65,955,338
JBrowse link
G Gata1 GATA binding protein 1 IAGP MGI PMID:12149188 NCBI chr  X:7,825,504...7,842,844
Ensembl chr  X:7,825,499...7,844,310
JBrowse link
G Gt(ROSA)26Sor gene trap ROSA 26, Philippe Soriano IAGP MGI PMID:20499347 PMID:29621230 NCBI chr 6:113,044,389...113,054,205
Ensembl chr 6:113,043,843...113,054,294
JBrowse link
G Hivep3 human immunodeficiency virus type I enhancer binding protein 3 IAGP MGI PMID:23945236 NCBI chr 4:119,590,982...119,992,608
Ensembl chr 4:119,590,981...119,995,242
JBrowse link
G Ibsp integrin binding sialoprotein IAGP MGI PMID:18458111 NCBI chr 5:104,447,153...104,459,338
Ensembl chr 5:104,447,037...104,459,335
JBrowse link
G Idua iduronidase, alpha-L IAGP MGI PMID:33905568 NCBI chr 5:108,808,197...108,833,312
Ensembl chr 5:108,808,197...108,832,423
JBrowse link
G Inpp4b inositol polyphosphate-4-phosphatase, type II IAGP MGI PMID:21982707 NCBI chr 8:82,068,895...82,865,553
Ensembl chr 8:82,069,185...82,854,543
JBrowse link
G Jdp2 Jun dimerization protein 2 IAGP MGI PMID:23200825 NCBI chr12:85,645,190...85,686,652
Ensembl chr12:85,645,801...85,686,652
JBrowse link
G Lgals3 lectin, galactose binding, soluble 3 IAGP MGI PMID:36062328 NCBI chr14:47,611,317...47,623,624
Ensembl chr14:47,605,208...47,623,617
JBrowse link
G Lrp4 low density lipoprotein receptor-related protein 4 IAGP MGI PMID:28477420 NCBI chr 2:91,287,794...91,344,246
Ensembl chr 2:91,287,856...91,344,124
JBrowse link
G Lrp5 low density lipoprotein receptor-related protein 5 IAGP MGI PMID:23945236 PMID:24225945 NCBI chr19:3,634,825...3,736,574
Ensembl chr19:3,634,828...3,736,564
JBrowse link
G Lrrk1 leucine-rich repeat kinase 1 IAGP MGI PMID:23526378 NCBI chr 7:65,908,493...66,038,089
Ensembl chr 7:65,876,660...66,038,098
JBrowse link
G Mir185 microRNA 185 IAGP MGI PMID:30787286 NCBI chr16:18,145,265...18,145,329
Ensembl chr16:18,145,265...18,145,329
JBrowse link
G Mir188 microRNA 188 IAGP MGI PMID:25751060 NCBI chr  X:7,114,228...7,114,295
Ensembl chr  X:7,114,228...7,114,295
JBrowse link
G Nbr1 NBR1, autophagy cargo receptor IAGP MGI PMID:20616007 NCBI chr11:101,442,933...101,472,777
Ensembl chr11:101,442,975...101,472,777
JBrowse link
G Ncor2 nuclear receptor co-repressor 2 IAGP MGI PMID:24191050 NCBI chr 5:125,094,217...125,256,302
Ensembl chr 5:125,094,217...125,256,283
JBrowse link
G Npffr2 neuropeptide FF receptor 2 IAGP MGI PMID:30413707 NCBI chr 5:89,674,805...89,731,473
Ensembl chr 5:89,675,288...89,731,599
JBrowse link
G Npy1r neuropeptide Y receptor Y1 IAGP MGI PMID:21040809 NCBI chr 8:67,149,595...67,159,452
Ensembl chr 8:67,149,844...67,159,444
JBrowse link
G Oscar osteoclast associated receptor IAGP MGI PMID:21841309 NCBI chr 7:3,612,812...3,619,156
Ensembl chr 7:3,612,812...3,619,156
JBrowse link
G Pdia3 protein disulfide isomerase associated 3 IAGP MGI PMID:20576531 NCBI chr 2:121,244,383...121,269,168
Ensembl chr 2:121,244,256...121,269,168
JBrowse link
G Phospho1 phosphatase, orphan 1 IAGP MGI PMID:20684022 NCBI chr11:95,715,326...95,722,966
Ensembl chr11:95,715,325...95,722,966
JBrowse link
G Plekhm1 pleckstrin homology domain containing, family M (with RUN domain) member 1 IAGP MGI PMID:27777970 NCBI chr11:103,255,101...103,303,531
Ensembl chr11:103,255,101...103,303,513
JBrowse link
G Pparg peroxisome proliferator activated receptor gamma IAGP MGI PMID:18059282 PMID:21876000 NCBI chr 6:115,337,828...115,467,365
Ensembl chr 6:115,337,912...115,467,360
JBrowse link
G Ptpn2 protein tyrosine phosphatase, non-receptor type 2 IAGP MGI PMID:22590589 NCBI chr18:67,798,571...67,857,697
Ensembl chr18:67,798,581...67,857,665
JBrowse link
G Ptpre protein tyrosine phosphatase receptor type E IAGP MGI PMID:14528021 NCBI chr 7:135,139,195...135,288,023
Ensembl chr 7:135,139,210...135,288,022
JBrowse link
G Rag1 recombination activating 1 IAGP MGI PMID:17611620 NCBI chr 2:101,468,597...101,479,877
Ensembl chr 2:101,468,627...101,479,846
JBrowse link
G Rgs12 regulator of G-protein signaling 12 IAGP MGI PMID:23349096 NCBI chr 5:35,106,273...35,196,988
Ensembl chr 5:35,106,789...35,196,988
JBrowse link
G Riox1 ribosomal oxygenase 1 IAGP MGI PMID:25736226 NCBI chr12:83,997,382...83,999,727
Ensembl chr12:83,997,382...83,999,725
JBrowse link
G Sbno2 strawberry notch 2 IAGP MGI PMID:23980096 NCBI chr10:79,892,826...79,941,942
Ensembl chr10:79,892,826...79,941,405
JBrowse link
G Sfrp4 secreted frizzled-related protein 4 IAGP MGI PMID:27117872 NCBI chr13:19,807,345...19,816,995
Ensembl chr13:19,807,274...19,817,164
JBrowse link
G Sh3bp2 SH3-domain binding protein 2 IAGP MGI PMID:28287403 NCBI chr 5:34,683,128...34,720,983
Ensembl chr 5:34,683,182...34,720,985
JBrowse link
G Siglec15 sialic acid binding Ig-like lectin 15 IAGP MGI PMID:23238125 NCBI chr18:78,085,708...78,100,656
Ensembl chr18:78,086,829...78,100,610
JBrowse link
G Slc4a2 solute carrier family 4 (anion exchanger), member 2 IAGP MGI PMID:23341620 NCBI chr 5:24,628,834...24,645,945
Ensembl chr 5:24,628,835...24,645,948
JBrowse link
G Slc5a1 solute carrier family 5 (sodium/glucose cotransporter), member 1 IAGP MGI PMID:23149623 NCBI chr 5:33,261,563...33,320,043
Ensembl chr 5:33,261,563...33,320,214
JBrowse link
G Slc5a2 solute carrier family 5 (sodium/glucose cotransporter), member 2 IAGP MGI PMID:23149623 NCBI chr 7:127,864,855...127,871,602
Ensembl chr 7:127,864,829...127,871,602
JBrowse link
G Snx10 sorting nexin 10 IAGP MGI PMID:25811986 PMID:32278070 NCBI chr 6:51,500,882...51,567,659
Ensembl chr 6:51,500,881...51,567,659
JBrowse link
G Socs2 suppressor of cytokine signaling 2 IAGP MGI PMID:18803233 NCBI chr10:95,219,765...95,253,176
Ensembl chr10:95,221,224...95,253,042
JBrowse link
G Sost sclerostin IAGP MGI PMID:18269310 PMID:22886088 PMID:24225945 NCBI chr11:101,853,284...101,857,841
Ensembl chr11:101,853,284...101,857,841
JBrowse link
G Spp1 secreted phosphoprotein 1 IAGP MGI PMID:16939396 NCBI chr 5:104,582,977...104,588,919
Ensembl chr 5:104,582,984...104,588,916
JBrowse link
G Sqstm1 sequestosome 1 IAGP MGI PMID:29555685 NCBI chr11:50,090,979...50,105,303
Ensembl chr11:50,090,193...50,101,654
JBrowse link
G Thra thyroid hormone receptor alpha IAGP MGI PMID:24914936 NCBI chr11:98,631,539...98,659,832
Ensembl chr11:98,631,464...98,659,832
JBrowse link
G Tmem64 transmembrane protein 64 IAGP MGI PMID:23395171 NCBI chr 4:15,265,820...15,286,753
Ensembl chr 4:15,265,831...15,286,753
JBrowse link
G Tnfrsf11a tumor necrosis factor receptor superfamily, member 11a, NFKB activator IAGP MGI PMID:19016581 PMID:33724536 NCBI chr 1:105,708,443...105,777,172
Ensembl chr 1:105,708,443...105,775,709
JBrowse link
G Tnfsf11 tumor necrosis factor (ligand) superfamily, member 11 IAGP MGI PMID:22068587 NCBI chr14:78,514,886...78,545,483
Ensembl chr14:78,514,885...78,545,483
JBrowse link
G Tyrobp TYRO protein tyrosine kinase binding protein IAGP MGI PMID:15632019 PMID:17611620 PMID:21841309 NCBI chr 7:30,113,207...30,117,007
Ensembl chr 7:30,113,185...30,117,010
JBrowse link
G Vhl von Hippel-Lindau tumor suppressor IAGP MGI PMID:22464323 NCBI chr 6:113,600,955...113,608,595
Ensembl chr 6:113,600,920...113,608,594
JBrowse link
G Zfp467 zinc finger protein 467 IAGP MGI PMID:33359894 NCBI chr 6:48,404,626...48,422,926
Ensembl chr 6:48,404,631...48,422,759
JBrowse link
increased bone trabecular spacing term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acbd5 acyl-Coenzyme A binding domain containing 5 IEA MGI NCBI chr 2:22,958,189...23,004,525
Ensembl chr 2:22,958,179...23,005,570
JBrowse link
G Ano5 anoctamin 5 IAGP MGI PMID:30712070 PMID:34841576 NCBI chr 7:51,160,668...51,248,459
Ensembl chr 7:51,160,777...51,248,457
JBrowse link
G Bbln bublin coiled coil protein IAGP MGI PMID:32569872 NCBI chr 2:32,269,120...32,271,877
Ensembl chr 2:32,267,109...32,271,950
JBrowse link
G Bmp1 bone morphogenetic protein 1 IAGP MGI PMID:24419319 NCBI chr14:70,711,998...70,758,280
Ensembl chr14:70,711,998...70,757,674
JBrowse link
G Chd7 chromodomain helicase DNA binding protein 7 IAGP MGI PMID:35418650 NCBI chr 4:8,690,345...8,868,449
Ensembl chr 4:8,690,406...8,867,659
JBrowse link
G Ciita class II transactivator IAGP MGI PMID:24038328 NCBI chr16:10,297,877...10,348,928
Ensembl chr16:10,297,923...10,346,282
JBrowse link
G Clec11a C-type lectin domain family 11, member a IAGP MGI PMID:27976999 NCBI chr 7:43,953,190...43,956,383
Ensembl chr 7:43,952,111...43,956,326
JBrowse link
G Cthrc1 collagen triple helix repeat containing 1 IAGP MGI PMID:23908115 NCBI chr15:38,940,327...38,950,516
Ensembl chr15:38,940,327...38,950,516
JBrowse link
G Ctsk cathepsin K IAGP MGI PMID:23908115 NCBI chr 3:95,406,521...95,416,698
Ensembl chr 3:95,406,567...95,416,673
JBrowse link
G Dpp3 dipeptidylpeptidase 3 IAGP MGI PMID:31295380 NCBI chr19:4,957,257...4,978,315
Ensembl chr19:4,957,257...4,978,315
JBrowse link
G Fam210a family with sequence similarity 210, member A IAGP MGI PMID:29618611 NCBI chr18:68,393,248...68,433,404
Ensembl chr18:68,393,258...68,433,404
JBrowse link
G Fgfr3 fibroblast growth factor receptor 3 IAGP MGI PMID:28230213 PMID:37345656 NCBI chr 5:33,879,068...33,894,412
Ensembl chr 5:33,879,018...33,894,412
JBrowse link
G Gas5 growth arrest specific 5 IAGP MGI PMID:33006314 NCBI chr 1:160,862,171...160,866,109
Ensembl chr 1:160,861,992...160,866,116
JBrowse link
G Gna11 guanine nucleotide binding protein, alpha 11 IAGP MGI PMID:28194446 NCBI chr10:81,364,558...81,380,996
Ensembl chr10:81,364,558...81,381,024
JBrowse link
G Gt(ROSA)26Sor gene trap ROSA 26, Philippe Soriano IAGP MGI PMID:29621230 PMID:30204862 NCBI chr 6:113,044,389...113,054,205
Ensembl chr 6:113,043,843...113,054,294
JBrowse link
G Idh2 isocitrate dehydrogenase 2 (NADP+), mitochondrial IAGP MGI PMID:29527922 NCBI chr 7:79,744,594...79,768,356
Ensembl chr 7:79,744,594...79,765,140
JBrowse link
G Ifitm5 interferon induced transmembrane protein 5 IAGP MGI PMID:28880886 NCBI chr 7:140,528,871...140,530,156
Ensembl chr 7:140,528,871...140,530,204
JBrowse link
G Itln1 intelectin 1 (galactofuranose binding) IAGP MGI PMID:29619269 NCBI chr 1:171,345,691...171,362,893
Ensembl chr 1:171,345,690...171,362,862
JBrowse link
G Lmna lamin A IAGP MGI PMID:32128409 NCBI chr 3:88,388,455...88,413,842
Ensembl chr 3:88,387,454...88,417,263
JBrowse link
G Lyz2 lysozyme 2 IAGP MGI PMID:28287403 NCBI chr10:117,113,446...117,118,177
Ensembl chr10:117,113,236...117,118,226
JBrowse link
G Mecom MDS1 and EVI1 complex locus IAGP MGI PMID:24316420 NCBI chr 3:30,005,445...30,563,937
Ensembl chr 3:30,005,445...30,602,157
JBrowse link
G Ndor1 NADPH dependent diflavin oxidoreductase 1 IAGP MGI PMID:24419319 NCBI chr 2:25,134,825...25,145,458
Ensembl chr 2:25,134,833...25,146,034
Ensembl chr 2:25,134,833...25,146,034
Ensembl chr 2:25,134,833...25,146,034
JBrowse link
G Notch2 notch 2 IAGP MGI PMID:28592489 NCBI chr 3:97,920,854...98,057,683
Ensembl chr 3:97,920,843...98,057,677
JBrowse link
G Nr3c1 nuclear receptor subfamily 3, group C, member 1 IAGP MGI PMID:20519123 NCBI chr18:39,543,598...39,652,485
Ensembl chr18:39,543,598...39,652,474
JBrowse link
G Pls3 plastin 3 (T-isoform) IAGP MGI PMID:30204862 NCBI chr  X:74,829,259...74,918,788
Ensembl chr  X:74,829,260...74,918,788
JBrowse link
G Ppib peptidylprolyl isomerase B IAGP MGI PMID:19997487 NCBI chr 9:65,967,451...65,973,911
Ensembl chr 9:65,967,504...65,973,905
JBrowse link
G Rnf146 ring finger protein 146 IAGP MGI PMID:28287403 PMID:28581440 NCBI chr10:29,220,172...29,238,438
Ensembl chr10:29,220,172...29,238,438
JBrowse link
G Runx2 runt related transcription factor 2 IAGP MGI PMID:25244033 NCBI chr17:44,806,873...45,125,518
Ensembl chr17:44,806,874...45,125,684
JBrowse link
G Slc39a14 solute carrier family 39 (zinc transporter), member 14 IAGP MGI PMID:21445361 NCBI chr14:70,540,916...70,588,873
Ensembl chr14:70,540,918...70,588,874
JBrowse link
G Smad1 SMAD family member 1 IAGP MGI PMID:21420501 NCBI chr 8:80,065,024...80,126,057
Ensembl chr 8:80,065,024...80,126,147
JBrowse link
G Tead3 TEA domain family member 3 IEA MGI NCBI chr17:28,550,645...28,569,779
Ensembl chr17:28,550,645...28,569,791
JBrowse link
G Terc telomerase RNA component IAGP MGI PMID:24626990 NCBI chr 3:96,321,753...96,322,149
Ensembl chr 3:96,321,753...96,322,149
JBrowse link
G Tll1 tolloid-like IAGP MGI PMID:24419319 NCBI chr 8:64,466,132...64,659,043
Ensembl chr 8:64,467,965...64,659,305
JBrowse link
G Tmem18 transmembrane protein 18 IEA MGI NCBI chr12:30,634,442...30,641,218
Ensembl chr12:30,634,425...30,641,214
JBrowse link
G Tnfsf11 tumor necrosis factor (ligand) superfamily, member 11 IAGP MGI PMID:21909103 NCBI chr14:78,514,886...78,545,483
Ensembl chr14:78,514,885...78,545,483
JBrowse link
G Tnfsf14 tumor necrosis factor (ligand) superfamily, member 14 IAGP MGI PMID:29178458 NCBI chr17:57,496,437...57,501,182
Ensembl chr17:57,496,492...57,501,177
JBrowse link
G Usp34 ubiquitin specific peptidase 34 IAGP MGI PMID:30181118 NCBI chr11:23,256,433...23,440,560
Ensembl chr11:23,256,895...23,440,560
JBrowse link
G Wrn Werner syndrome RecQ like helicase IAGP MGI PMID:24626990 NCBI chr 8:33,724,400...33,875,591
Ensembl chr 8:33,724,412...33,875,555
JBrowse link
increased trabecular bone connectivity density term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acp2 acid phosphatase 2, lysosomal IAGP MGI PMID:9228031 NCBI chr 2:91,033,157...91,044,443
Ensembl chr 2:91,033,230...91,044,443
JBrowse link
G Agtr2 angiotensin II receptor, type 2 IAGP MGI PMID:19004830 NCBI chr  X:21,350,863...21,355,072
Ensembl chr  X:21,350,783...21,355,403
JBrowse link
G Ano5 anoctamin 5 IAGP MGI PMID:34841576 NCBI chr 7:51,160,668...51,248,459
Ensembl chr 7:51,160,777...51,248,457
JBrowse link
G Ctsk cathepsin K IAGP MGI PMID:23321671 NCBI chr 3:95,406,521...95,416,698
Ensembl chr 3:95,406,567...95,416,673
JBrowse link
G Fndc5 fibronectin type III domain containing 5 IAGP MGI PMID:30550785 NCBI chr 4:129,030,672...129,038,386
Ensembl chr 4:129,030,477...129,038,386
JBrowse link
G Lgals3 lectin, galactose binding, soluble 3 IAGP MGI PMID:36062328 NCBI chr14:47,611,317...47,623,624
Ensembl chr14:47,605,208...47,623,617
JBrowse link
G Lrp4 low density lipoprotein receptor-related protein 4 IAGP MGI PMID:28477420 NCBI chr 2:91,287,794...91,344,246
Ensembl chr 2:91,287,856...91,344,124
JBrowse link
G Mitf melanogenesis associated transcription factor IAGP MGI PMID:7495310 NCBI chr 6:97,783,966...97,998,321
Ensembl chr 6:97,784,013...97,998,310
JBrowse link
G Rag1 recombination activating 1 IAGP MGI PMID:17611620 NCBI chr 2:101,468,597...101,479,877
Ensembl chr 2:101,468,627...101,479,846
JBrowse link
G Sfrp4 secreted frizzled-related protein 4 IAGP MGI PMID:27117872 NCBI chr13:19,807,345...19,816,995
Ensembl chr13:19,807,274...19,817,164
JBrowse link
G Sost sclerostin IAGP MGI PMID:22886088 NCBI chr11:101,853,284...101,857,841
Ensembl chr11:101,853,284...101,857,841
JBrowse link
G Tyrobp TYRO protein tyrosine kinase binding protein IAGP MGI PMID:17611620 NCBI chr 7:30,113,207...30,117,007
Ensembl chr 7:30,113,185...30,117,010
JBrowse link
G Xylt1 xylosyltransferase 1 IAGP MGI PMID:24161523 NCBI chr 7:116,980,214...117,266,853
Ensembl chr 7:116,980,214...117,272,803
JBrowse link
G Zfp467 zinc finger protein 467 IAGP MGI PMID:33359894 NCBI chr 6:48,404,626...48,422,926
Ensembl chr 6:48,404,631...48,422,759
JBrowse link
increased trabecular bone mass term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp1 bone morphogenetic protein 1 IAGP MGI PMID:24419319 NCBI chr14:70,711,998...70,758,280
Ensembl chr14:70,711,998...70,757,674
JBrowse link
G Calcr calcitonin receptor IAGP MGI PMID:18627265 NCBI chr 6:3,685,678...3,764,713
Ensembl chr 6:3,685,680...3,764,714
JBrowse link
G Csf1 colony stimulating factor 1 (macrophage) IAGP MGI PMID:21958845 NCBI chr 3:107,648,364...107,668,048
Ensembl chr 3:107,648,364...107,667,785
JBrowse link
G Ctsk cathepsin K IAGP MGI PMID:16753017 PMID:23321671 PMID:27777970 NCBI chr 3:95,406,521...95,416,698
Ensembl chr 3:95,406,567...95,416,673
JBrowse link
G Dcstamp dendrocyte expressed seven transmembrane protein IAGP MGI PMID:16061724 NCBI chr15:39,609,326...39,624,334
Ensembl chr15:39,609,326...39,624,334
JBrowse link
G Fndc5 fibronectin type III domain containing 5 IAGP MGI PMID:30550785 NCBI chr 4:129,030,672...129,038,386
Ensembl chr 4:129,030,477...129,038,386
JBrowse link
G Gab2 growth factor receptor bound protein 2-associated protein 2 IAGP MGI PMID:15750601 NCBI chr 7:96,730,958...96,958,158
Ensembl chr 7:96,730,793...96,958,153
JBrowse link
G Gsk3b glycogen synthase kinase 3 beta IAGP MGI PMID:17786208 NCBI chr16:37,909,363...38,066,446
Ensembl chr16:37,909,363...38,066,446
JBrowse link
G Gt(ROSA)26Sor gene trap ROSA 26, Philippe Soriano IAGP MGI PMID:20010698 PMID:24497849 NCBI chr 6:113,044,389...113,054,205
Ensembl chr 6:113,043,843...113,054,294
JBrowse link
G Lgals3 lectin, galactose binding, soluble 3 IAGP MGI PMID:36062328 NCBI chr14:47,611,317...47,623,624
Ensembl chr14:47,605,208...47,623,617
JBrowse link
G Lrp5 low density lipoprotein receptor-related protein 5 IAGP MGI PMID:24225945 NCBI chr19:3,634,825...3,736,574
Ensembl chr19:3,634,828...3,736,564
JBrowse link
G Ltbp3 latent transforming growth factor beta binding protein 3 IAGP MGI PMID:11790802 NCBI chr19:5,790,928...5,808,564
Ensembl chr19:5,790,932...5,808,560
JBrowse link
G Mmp13 matrix metallopeptidase 13 IAGP MGI PMID:15563592 NCBI chr 9:7,272,514...7,283,333
Ensembl chr 9:7,272,514...7,283,331
JBrowse link
G Ndor1 NADPH dependent diflavin oxidoreductase 1 IAGP MGI PMID:24419319 NCBI chr 2:25,134,825...25,145,458
Ensembl chr 2:25,134,833...25,146,034
Ensembl chr 2:25,134,833...25,146,034
Ensembl chr 2:25,134,833...25,146,034
JBrowse link
G Npffr2 neuropeptide FF receptor 2 IAGP MGI PMID:30413707 NCBI chr 5:89,674,805...89,731,473
Ensembl chr 5:89,675,288...89,731,599
JBrowse link
G Pcdh7 protocadherin 7 IAGP MGI PMID:32635982 NCBI chr 5:57,873,487...58,290,578
Ensembl chr 5:57,875,309...58,290,572
JBrowse link
G Plekhm1 pleckstrin homology domain containing, family M (with RUN domain) member 1 IAGP MGI PMID:27777970 NCBI chr11:103,255,101...103,303,531
Ensembl chr11:103,255,101...103,303,513
JBrowse link
G Plxna1 plexin A1 IAGP MGI PMID:16715077 NCBI chr 6:89,293,295...89,339,595
Ensembl chr 6:89,293,296...89,339,602
JBrowse link
G Pparg peroxisome proliferator activated receptor gamma IAGP MGI PMID:15067317 NCBI chr 6:115,337,828...115,467,365
Ensembl chr 6:115,337,912...115,467,360
JBrowse link
G Sfrp4 secreted frizzled-related protein 4 IAGP MGI PMID:27117872 NCBI chr13:19,807,345...19,816,995
Ensembl chr13:19,807,274...19,817,164
JBrowse link
G Siglec15 sialic acid binding Ig-like lectin 15 IAGP MGI PMID:23238125 NCBI chr18:78,085,708...78,100,656
Ensembl chr18:78,086,829...78,100,610
JBrowse link
G Smurf1 SMAD specific E3 ubiquitin protein ligase 1 IAGP MGI PMID:15820682 NCBI chr 5:144,813,305...144,902,657
Ensembl chr 5:144,813,305...144,902,657
JBrowse link
G Sost sclerostin IAGP MGI PMID:24225945 NCBI chr11:101,853,284...101,857,841
Ensembl chr11:101,853,284...101,857,841
JBrowse link
G Spon1 spondin 1, (f-spondin) extracellular matrix protein IAGP MGI PMID:24875054 NCBI chr 7:113,365,235...113,642,610
Ensembl chr 7:113,365,235...113,642,605
JBrowse link
G Src Rous sarcoma oncogene IAGP MGI PMID:1997203 NCBI chr 2:157,265,828...157,313,758
Ensembl chr 2:157,260,364...157,313,782
JBrowse link
G Tcirg1 T cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 protein A3 IAGP MGI PMID:21305608 NCBI chr19:3,946,050...3,957,717
Ensembl chr19:3,946,050...3,957,133
JBrowse link
G Tll1 tolloid-like IAGP MGI PMID:24419319 NCBI chr 8:64,466,132...64,659,043
Ensembl chr 8:64,467,965...64,659,305
JBrowse link
G Tob1 transducer of ErbB-2.1 IAGP MGI PMID:11163184 NCBI chr11:94,100,668...94,106,321
Ensembl chr11:94,102,280...94,106,321
JBrowse link
G Tyrobp TYRO protein tyrosine kinase binding protein IAGP MGI PMID:12569157 NCBI chr 7:30,113,207...30,117,007
Ensembl chr 7:30,113,185...30,117,010
JBrowse link
G Vhl von Hippel-Lindau tumor suppressor IAGP MGI PMID:22464323 NCBI chr 6:113,600,955...113,608,595
Ensembl chr 6:113,600,920...113,608,594
JBrowse link
G Zfp467 zinc finger protein 467 IAGP MGI PMID:33359894 NCBI chr 6:48,404,626...48,422,926
Ensembl chr 6:48,404,631...48,422,759
JBrowse link
increased trabecular bone thickness term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abhd5 abhydrolase domain containing 5 IAGP MGI PMID:24652767 NCBI chr 9:122,180,681...122,210,589
Ensembl chr 9:122,180,673...122,210,589
JBrowse link
G Adipoq adiponectin, C1Q and collagen domain containing IAGP MGI PMID:23684624 NCBI chr16:22,965,286...22,976,718
Ensembl chr16:22,965,286...22,976,778
JBrowse link
G Ager advanced glycosylation end product-specific receptor IAGP MGI PMID:16403440 NCBI chr17:34,816,545...34,819,911
Ensembl chr17:34,816,836...34,819,910
JBrowse link
G Agtr2 angiotensin II receptor, type 2 IAGP MGI PMID:19004830 NCBI chr  X:21,350,863...21,355,072
Ensembl chr  X:21,350,783...21,355,403
JBrowse link
G Amer1 APC membrane recruitment 1 IAGP MGI PMID:21571217 NCBI chr  X:94,463,919...94,488,446
Ensembl chr  X:94,463,924...94,488,478
JBrowse link
G Atf4 activating transcription factor 4 IAGP MGI PMID:23945236 NCBI chr15:80,139,385...80,141,746
Ensembl chr15:80,139,385...80,141,742
JBrowse link
G Bglap bone gamma carboxyglutamate protein IAGP MGI PMID:8684484 NCBI chr 3:88,290,802...88,291,773
Ensembl chr 3:88,290,808...88,291,771
JBrowse link
G Bglap2 bone gamma-carboxyglutamate protein 2 IAGP MGI PMID:8684484 NCBI chr 3:88,285,043...88,286,008
Ensembl chr 3:88,285,043...88,286,006
JBrowse link
G Cav1 caveolin 1, caveolae protein IAGP MGI PMID:17550335 NCBI chr 6:17,306,387...17,341,323
Ensembl chr 6:17,306,334...17,341,451
JBrowse link
G Ccdc154 coiled-coil domain containing 154 IAGP MGI PMID:20121924 NCBI chr17:25,381,142...25,390,887
Ensembl chr17:25,381,435...25,390,887
JBrowse link
G Ccr2 C-C motif chemokine receptor 2 IAGP MGI PMID:19330010 NCBI chr 9:123,901,954...123,913,594
Ensembl chr 9:123,901,987...123,913,594
JBrowse link
G Cd47 CD47 antigen (Rh-related antigen, integrin-associated signal transducer) IAGP MGI PMID:19276363 NCBI chr16:49,671,691...49,732,799
Ensembl chr16:49,620,896...49,735,373
JBrowse link
G Cebpb CCAAT/enhancer binding protein beta IAGP MGI PMID:20047998 NCBI chr 2:167,530,835...167,532,352
Ensembl chr 2:167,530,835...167,532,338
JBrowse link
G Chad chondroadherin IAGP MGI PMID:23755099 NCBI chr11:94,455,873...94,459,953
Ensembl chr11:94,455,873...94,459,953
JBrowse link
G Clcn7 chloride channel, voltage-sensitive 7 IAGP MGI PMID:20430974 PMID:27746321 PMID:28942122 NCBI chr17:25,352,353...25,381,077
Ensembl chr17:25,352,365...25,381,078
JBrowse link
G Ctnnb1 catenin beta 1 IAGP MGI PMID:21876000 NCBI chr 9:120,762,466...120,789,573
Ensembl chr 9:120,758,282...120,789,573
JBrowse link
G Ctsk cathepsin K IAGP MGI PMID:23321671 PMID:23341620 NCBI chr 3:95,406,521...95,416,698
Ensembl chr 3:95,406,567...95,416,673
JBrowse link
G Ebf1 early B cell factor 1 IAGP MGI PMID:19130908 NCBI chr11:44,502,738...44,898,923
Ensembl chr11:44,508,144...44,898,918
JBrowse link
G Grem1 gremlin 1, DAN family BMP antagonist IAGP MGI PMID:17785465 NCBI chr 2:113,579,020...113,588,993
Ensembl chr 2:113,576,509...113,588,991
JBrowse link
G Gt(ROSA)26Sor gene trap ROSA 26, Philippe Soriano IAGP MGI PMID:20499347 PMID:29621230 NCBI chr 6:113,044,389...113,054,205
Ensembl chr 6:113,043,843...113,054,294
JBrowse link
G Hivep3 human immunodeficiency virus type I enhancer binding protein 3 IAGP MGI PMID:23945236 NCBI chr 4:119,590,982...119,992,608
Ensembl chr 4:119,590,981...119,995,242
JBrowse link
G Htra1 HtrA serine peptidase 1 IAGP MGI PMID:24040176 NCBI chr 7:130,537,933...130,587,388
Ensembl chr 7:130,537,841...130,587,390
JBrowse link
G Il20ra interleukin 20 receptor, alpha IAGP MGI PMID:21844205 NCBI chr10:19,587,421...19,635,801
Ensembl chr10:19,588,318...19,635,801
JBrowse link
G Il6st interleukin 6 signal transducer IAGP MGI PMID:16679075 NCBI chr13:112,600,604...112,643,394
Ensembl chr13:112,600,604...112,646,620
JBrowse link
G Ilk integrin linked kinase IAGP MGI PMID:20564195 NCBI chr 7:105,385,797...105,392,132
Ensembl chr 7:105,385,799...105,392,132
JBrowse link
G Inpp4b inositol polyphosphate-4-phosphatase, type II IAGP MGI PMID:21982707 NCBI chr 8:82,068,895...82,865,553
Ensembl chr 8:82,069,185...82,854,543
JBrowse link
G Itgb3 integrin beta 3 IAGP MGI PMID:10683372 PMID:20564195 NCBI chr11:104,498,826...104,561,302
Ensembl chr11:104,498,826...104,561,302
JBrowse link
G Lep leptin IAGP MGI PMID:23684624 NCBI chr 6:29,060,220...29,073,875
Ensembl chr 6:29,060,219...29,073,876
JBrowse link
G Lgals3 lectin, galactose binding, soluble 3 IAGP MGI PMID:36062328 NCBI chr14:47,611,317...47,623,624
Ensembl chr14:47,605,208...47,623,617
JBrowse link
G Lrp4 low density lipoprotein receptor-related protein 4 IAGP MGI PMID:28477420 NCBI chr 2:91,287,794...91,344,246
Ensembl chr 2:91,287,856...91,344,124
JBrowse link
G Lrp5 low density lipoprotein receptor-related protein 5 IAGP MGI PMID:23945236 NCBI chr19:3,634,825...3,736,574
Ensembl chr19:3,634,828...3,736,564
JBrowse link
G Lrrk1 leucine-rich repeat kinase 1 IAGP MGI PMID:23526378 NCBI chr 7:65,908,493...66,038,089
Ensembl chr 7:65,876,660...66,038,098
JBrowse link
G Mir185 microRNA 185 IAGP MGI PMID:30787286 NCBI chr16:18,145,265...18,145,329
Ensembl chr16:18,145,265...18,145,329
JBrowse link
G Mir338 microRNA 338 IAGP MGI PMID:31281513 NCBI chr11:119,905,591...119,905,688
Ensembl chr11:119,905,591...119,905,688
JBrowse link
G Mob1a MOB kinase activator 1A IAGP MGI PMID:23143302 NCBI chr 6:83,303,016...83,320,758
Ensembl chr 6:83,302,998...83,320,758
JBrowse link
G Mob1b MOB kinase activator 1B IAGP MGI PMID:23143302 NCBI chr 5:88,868,730...88,906,314
Ensembl chr 5:88,868,714...88,912,079
JBrowse link
G Nos1 nitric oxide synthase 1, neuronal IAGP MGI PMID:15297441 NCBI chr 5:118,004,904...118,096,905
Ensembl chr 5:117,919,097...118,096,905
JBrowse link
G Npffr2 neuropeptide FF receptor 2 IAGP MGI PMID:30413707 NCBI chr 5:89,674,805...89,731,473
Ensembl chr 5:89,675,288...89,731,599
JBrowse link
G Npy1r neuropeptide Y receptor Y1 IAGP MGI PMID:21040809 NCBI chr 8:67,149,595...67,159,452
Ensembl chr 8:67,149,844...67,159,444
JBrowse link
G Npy2r neuropeptide Y receptor Y2 IAGP MGI PMID:11927618 PMID:12861009 NCBI chr 3:82,445,688...82,455,404
Ensembl chr 3:82,445,690...82,455,391
JBrowse link
G Npy4r neuropeptide Y receptor Y4 IAGP MGI PMID:12861009 NCBI chr14:33,867,603...33,874,376
Ensembl chr14:33,865,949...33,874,446
JBrowse link
G Pcdh7 protocadherin 7 IAGP MGI PMID:32635982 NCBI chr 5:57,873,487...58,290,578
Ensembl chr 5:57,875,309...58,290,572
JBrowse link
G Pgr progesterone receptor IAGP MGI PMID:18276762 NCBI chr 9:8,890,017...8,968,612
Ensembl chr 9:8,899,834...8,968,612
JBrowse link
G Plcg2 phospholipase C, gamma 2 IAGP MGI PMID:17053833 NCBI chr 8:118,225,014...118,361,881
Ensembl chr 8:118,225,030...118,361,881
JBrowse link
G Pparg peroxisome proliferator activated receptor gamma IAGP MGI PMID:18059282 PMID:21876000 NCBI chr 6:115,337,828...115,467,365
Ensembl chr 6:115,337,912...115,467,360
JBrowse link
G Rab33b RAB33B, member RAS oncogene family IAGP MGI PMID:37359363 NCBI chr 3:51,391,387...51,403,649
Ensembl chr 3:51,391,341...51,403,653
JBrowse link
G Rgs12 regulator of G-protein signaling 12 IAGP MGI PMID:23349096 NCBI chr 5:35,106,273...35,196,988
Ensembl chr 5:35,106,789...35,196,988
JBrowse link
G Sbno2 strawberry notch 2