Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

MEASUREMENT METHODS - ANNOTATIONS

The Clinical Measurement Ontology (CMO), Measurement Methods Ontology (MMO), and Experimental Condition Ontology (XCO) are currently being developed at the Rat Genome Database. For more information about these vocabularies please see Shimoyama et al. Three ontologies to define phenotype measurement data. Front Genet. 2012;3:87. Epub 2012 May 28 or contact us (http://rgd.mcw.edu/contact/index.shtml).

Term:ex vivo light microscopy with histochemistry
go back to main search page
Accession:MMO:0000561 term browser browse the term
Definition:A method performed outside the living body, for instance, on isolated cells or tissues, which incorporates the use of light microscopy and histochemistry to produce magnified images. Histochemistry is the microscopic analysis of tissues stained with chemical agents to increase the contrast and aid visualization or to highlight specific substances within the specimen.



show annotations for term's descendants           Sort by:
ex vivo light microscopy with histochemistry term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Gdil2 Gastrointestinal dilation QTL 2 IDA RGD PMID:25790447 RGD:10402048 NCBI chr 2:24,903,853...74,786,777 JBrowse link
ex vivo light microscopy with immunohistochemistry and digital image analysis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Gcr3 Gastric cancer resistance QTL 3 IDA RGD PMID:10706129 RGD:69698 NCBI chr16:17,696,791...82,635,055 JBrowse link
Q Lnnr1 Liver neoplastic nodule remodeling QTL 1 IDA RGD PMID:12672032 RGD:629574 NCBI chr 7:34,293,282...79,293,282 JBrowse link
Q Lnnr2 Liver neoplastic nodule remodeling QTL 2 IDA RGD PMID:12672032 RGD:629574 NCBI chr 1:233,948,574...260,522,016 JBrowse link
Q Neuinf4 Neuroinflammation QTL 4 IDA RGD PMID:19525015 RGD:2311085 NCBI chr 1:1...28,736,750 JBrowse link
Q Neuinf5 Neuroinflammation QTL 5 IDA RGD PMID:19525015 RGD:2311085 NCBI chr 7:9,462,246...58,265,113 JBrowse link
Q Neuinf6 Neuroinflammation QTL 6 IDA RGD PMID:19525015 RGD:2311085 NCBI chr 7:1...27,829,089 JBrowse link
Q Neuinf7 Neuroinflammation QTL 7 IDA RGD PMID:19525015 RGD:2311085 NCBI chr10:72,224,939...107,211,142 JBrowse link

Related Phenotype Data for Term "ex vivo light microscopy with histochemistry" (MMO:0000561)

Rat Strains:
Clinical Measurements:
Experimental Conditions:
Measurement Methods:

Term paths to the root
Path 1
Term Annotations click to browse term
  measurement method 2368
    ex vivo method 1236
      ex vivo microscopy 132
        ex vivo light microscopy 127
          ex vivo light microscopy with histochemistry 8
            ex vivo light microscopy with histochemistry and digital image analysis + 7
            ex vivo light microscopy with immunohistochemistry + 7
Path 2
Term Annotations click to browse term
  measurement method 2368
    ex vivo method 1236
      ex vivo microscopy 132
        histology 8
          histochemistry 8
            ex vivo light microscopy with histochemistry 8
              ex vivo light microscopy with histochemistry and digital image analysis + 7
              ex vivo light microscopy with immunohistochemistry + 7
paths to the root