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MEASUREMENT METHODS - ANNOTATIONS

The Clinical Measurement Ontology (CMO), Measurement Methods Ontology (MMO), and Experimental Condition Ontology (XCO) are currently being developed at the Rat Genome Database. For more information about these vocabularies please see Shimoyama et al. Three ontologies to define phenotype measurement data. Front Genet. 2012;3:87. Epub 2012 May 28 or contact us (http://rgd.mcw.edu/contact/index.shtml).

Term:blood differential lipoprotein-cholesterol analysis
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Accession:MMO:0000489 term browser browse the term
Definition:Any laboratory test which measures the amount of cholesterol carried by or specifically associated with a particular type of lipoprotein (a complex particle that consists of a protein layer surrounding a core of lipids) in blood. Cholesterol is a eukaryotic sterol that in higher animals is the precursor of bile acids and steroid hormones and a key constituent of cell membranes.



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blood high-density lipoprotein-cholesterol measurement test term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Scl32 Serum cholesterol level QTL 32 IDA RGD PMID:15452030 RGD:1302893 NCBI chr17:15,781,592...60,781,592 JBrowse link
blood very low-density lipoprotein-cholesterol measurement test term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Scl68 Serum cholesterol level QTL 68 IDA RGD PMID:15452030 RGD:1302893 NCBI chr17:15,781,592...60,781,592 JBrowse link
serum high-density lipoprotein-cholesterol measurement test term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Scl12 Serum cholesterol level QTL 12 IDA RGD PMID:8698878 RGD:61079 NCBI chr19:13,926,401...30,303,727 JBrowse link
Q Scl27 Serum cholesterol level QTL 27 IDA RGD PMID:11721057 RGD:70849 NCBI chr18:52,292,875...59,796,643 JBrowse link
Q Scl28 Serum cholesterol level QTL 28 IDA RGD PMID:11721057 RGD:70849 NCBI chr18:11,944,299...24,797,117 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  measurement method 2368
    ex vivo method 1236
      ex vivo biological fluid analysis 305
        ex vivo blood analysis 250
          blood lipid analysis 57
            blood lipoprotein analysis 5
              blood differential lipoprotein-cholesterol analysis 5
                blood high-density lipoprotein-cholesterol measurement test + 4
                blood intermediate-density lipoprotein cholesterol measurement test + 0
                blood low-density lipoprotein-cholesterol measurement test + 0
                blood very low-density lipoprotein-cholesterol measurement test + 1
Path 2
Term Annotations click to browse term
  measurement method 2368
    ex vivo method 1236
      ex vivo biological fluid analysis 305
        ex vivo blood analysis 250
          blood lipid analysis 57
            blood sterol analysis 36
              blood cholesterol analysis 36
                blood differential lipoprotein-cholesterol analysis 5
                  blood high-density lipoprotein-cholesterol measurement test + 4
                  blood intermediate-density lipoprotein cholesterol measurement test + 0
                  blood low-density lipoprotein-cholesterol measurement test + 0
                  blood very low-density lipoprotein-cholesterol measurement test + 1
paths to the root