Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

ONTOLOGY REPORT - ANNOTATIONS

Term:regulation of cell-cell adhesion mediated by cadherin
go back to main search page
Accession:GO:2000047 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of cell-cell adhesion mediated by cadherin.
Synonyms:xref: Reactome:R-HSA-9764260 "Regulation of Expression and Function of Type II Classical Cadherins"


show annotations for term's descendants           Sort by:
negative regulation of cell-cell adhesion mediated by cadherin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp6 bone morphogenetic protein 6 involved_in ISO
IEA 		GO_Central
Ensembl		 GO_REF:0000107 GO_REF:0000119 NCBI chr13:38,529,098...38,684,283
Ensembl chr13:38,529,083...38,684,278 		JBrowse link
G Epcam epithelial cell adhesion molecule involved_in ISO
IEA 		GO_Central
Ensembl		 GO_REF:0000107 GO_REF:0000119 NCBI chr17:87,943,407...87,958,555
Ensembl chr17:87,943,407...87,958,557 		JBrowse link
G Mad2l2 MAD2 mitotic arrest deficient-like 2 involved_in IEA
ISO 		Ensembl
GO_Central		 GO_REF:0000107 GO_REF:0000119 NCBI chr 4:148,214,615...148,230,161
Ensembl chr 4:148,214,841...148,230,156 		JBrowse link
G Nexmif neurite extension and migration factor involved_in ISO
IEA
IBA 		RGD
Ensembl
GO_Central		 PMID:24071057 GO_REF:0000033 GO_REF:0000096 GO_REF:0000107 RGD:13442493 NCBI chr  X:103,120,367...103,245,403
Ensembl chr  X:103,121,040...103,244,791 		JBrowse link
G Notch1 notch 1 involved_in IEA
ISO 		Ensembl
GO_Central		 GO_REF:0000107 GO_REF:0000119 NCBI chr 2:26,347,914...26,393,834
Ensembl chr 2:26,347,915...26,406,675 		JBrowse link
G Notch4 notch 4 involved_in ISO GO_Central GO_REF:0000119 NCBI chr17:34,783,257...34,807,517
Ensembl chr17:34,783,242...34,807,477 		JBrowse link
G Ppm1f protein phosphatase 1F (PP2C domain containing) involved_in IEA
ISO 		Ensembl
GO_Central		 GO_REF:0000107 GO_REF:0000119 NCBI chr16:16,714,314...16,745,239
Ensembl chr16:16,714,333...16,745,228 		JBrowse link
G Rgcc regulator of cell cycle involved_in
acts_upstream_of 		IEA
ISO 		(PMID:19158077) Ensembl
BHF-UCL
GO_Central		 PMID:19158077 GO_REF:0000107 GO_REF:0000119 NCBI chr14:79,526,190...79,539,075
Ensembl chr14:79,526,196...79,539,085 		JBrowse link
G Tgfb1 transforming growth factor, beta 1 involved_in ISS UniProt GO_REF:0000024 NCBI chr 7:25,386,406...25,404,503
Ensembl chr 7:25,386,427...25,404,502 		JBrowse link
G Vegfa vascular endothelial growth factor A involved_in IEA
ISO 		Ensembl
GO_Central		 GO_REF:0000107 GO_REF:0000119 NCBI chr17:46,327,919...46,343,303
Ensembl chr17:46,327,919...46,343,295 		JBrowse link
positive regulation of cell-cell adhesion mediated by cadherin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adam19 ADAM metallopeptidase domain 19 involved_in ISS
ISO 		UniProt
GO_Central		 GO_REF:0000024 GO_REF:0000119 NCBI chr11:45,945,329...46,038,174
Ensembl chr11:45,946,819...46,038,170 		JBrowse link
G Afdn afadin, adherens junction formation factor involved_in ISO GO_Central GO_REF:0000119 NCBI chr17:13,980,735...14,126,059
Ensembl chr17:13,980,801...14,126,412 		JBrowse link
G Dennd6a DENN domain containing 6A involved_in ISS
ISO 		UniProt
GO_Central		 GO_REF:0000024 GO_REF:0000119 NCBI chr14:26,295,013...26,355,477
Ensembl chr14:26,295,011...26,355,477 		JBrowse link
G Flot1 flotillin 1 involved_in ISO
IMP
IBA 		(PMID:24046456) GO_Central
UniProt		 PMID:24046456 GO_REF:0000033 GO_REF:0000119 NCBI chr17:36,134,243...36,143,674
Ensembl chr17:36,134,122...36,143,683 		JBrowse link
G Ptpru protein tyrosine phosphatase receptor type U involved_in ISO
IEA 		GO_Central
Ensembl		 GO_REF:0000107 GO_REF:0000119 NCBI chr 4:131,495,768...131,565,617
Ensembl chr 4:131,495,768...131,565,599 		JBrowse link
G Smad7 SMAD family member 7 involved_in IMP (PMID:18593713) BHF-UCL PMID:18593713 NCBI chr18:75,500,436...75,529,006
Ensembl chr18:75,500,600...75,529,006 		JBrowse link
G Tjp1 tight junction protein 1 involved_in ISO GO_Central GO_REF:0000119 NCBI chr 7:64,945,913...65,177,629
Ensembl chr 7:64,945,913...65,177,529 		JBrowse link
G Wnt3a wingless-type MMTV integration site family, member 3A acts_upstream_of_or_within IDA (PMID:10893270) MGI PMID:10893270 NCBI chr11:59,138,859...59,181,579
Ensembl chr11:59,138,859...59,181,578 		JBrowse link
G Wnt5a wingless-type MMTV integration site family, member 5A acts_upstream_of_or_within IDA (PMID:10893270) MGI PMID:10893270 NCBI chr14:28,224,962...28,249,405
Ensembl chr14:28,226,707...28,249,405 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 28625
    cellular process 18393
      cell adhesion 1577
        regulation of cell adhesion 875
          regulation of cell-cell adhesion 547
            regulation of cell-cell adhesion mediated by cadherin 19
              negative regulation of cell-cell adhesion mediated by cadherin 10
              positive regulation of cell-cell adhesion mediated by cadherin 9
Path 2
Term Annotations click to browse term
  biological_process 28625
    biological regulation 13469
      regulation of biological process 13028
        regulation of cellular process 12646
          regulation of cell adhesion 875
            regulation of cell-cell adhesion 547
              regulation of cell-cell adhesion mediated by cadherin 19
                negative regulation of cell-cell adhesion mediated by cadherin 10
                positive regulation of cell-cell adhesion mediated by cadherin 9
paths to the root