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ONTOLOGY REPORT - ANNOTATIONS

Term:regulation of cell-cell adhesion mediated by cadherin
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Accession:GO:2000047 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of cell-cell adhesion mediated by cadherin.
Synonyms:xref: Reactome:R-HSA-9764260 "Regulation of Expression and Function of Type II Classical Cadherins"


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negative regulation of cell-cell adhesion mediated by cadherin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B9D2 B9 domain containing 2 involved_in ISO (PMID:18593713) BHF-UCL PMID:18593713 NCBI chr 1:112,621,832...112,627,726
Ensembl chr 1:112,621,633...112,643,885 		JBrowse link
G BMP6 bone morphogenetic protein 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr35:7,780,763...7,833,095
Ensembl chr35:7,804,231...7,831,845 		JBrowse link
G EPCAM epithelial cell adhesion molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:49,446,165...49,498,690
Ensembl chr10:49,485,746...49,498,475 		JBrowse link
G MAD2L2 mitotic arrest deficient 2 like 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:84,539,724...84,549,402
Ensembl chr 2:84,545,226...84,549,356 		JBrowse link
G NEXMIF neurite extension and migration factor involved_in ISO
IBA 		RGD
GO_Central		 PMID:24071057 GO_REF:0000033 RGD:13442493 NCBI chr  X:57,986,884...58,120,453
Ensembl chr  X:57,992,476...58,013,478 		JBrowse link
G NOTCH1 notch receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:48,975,972...49,018,985
Ensembl chr 9:48,974,757...49,017,277 		JBrowse link
G NOTCH4 notch receptor 4 involved_in ISO (PMID:17984306) ARUK-UCL PMID:17984306 NCBI chr12:1,585,249...1,608,721
Ensembl chr12:1,587,918...1,607,760 		JBrowse link
G PPM1F protein phosphatase, Mg2+/Mn2+ dependent 1F involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:31,162,810...31,193,586
Ensembl chr26:31,166,593...31,193,587 		JBrowse link
G RGCC regulator of cell cycle involved_in
acts_upstream_of 		IEA
ISO 		(PMID:19158077) Ensembl
BHF-UCL		 PMID:19158077 GO_REF:0000107 NCBI chr22:9,199,204...9,209,297 JBrowse link
G TGFB1 transforming growth factor beta 1 involved_in ISS
IEA 		UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:112,629,476...112,643,885
Ensembl chr 1:112,621,633...112,643,885 		JBrowse link
G VEGFA vascular endothelial growth factor A involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:12,209,032...12,224,978
Ensembl chr12:12,208,231...12,224,965 		JBrowse link
positive regulation of cell-cell adhesion mediated by cadherin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADAM19 ADAM metallopeptidase domain 19 involved_in ISO (PMID:19727588) UniProt PMID:19727588 NCBI chr 4:52,650,077...52,733,299
Ensembl chr 4:52,650,162...52,729,843 		JBrowse link
G AFDN afadin, adherens junction formation factor involved_in ISO (PMID:16882694) ARUK-UCL PMID:16882694 NCBI chr 1:55,435,451...55,535,534
Ensembl chr 1:55,435,472...55,535,543 		JBrowse link
G DENND6A DENN domain containing 6A involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:32,780,529...32,830,388
Ensembl chr20:32,780,579...32,830,478 		JBrowse link
G FLOT1 flotillin 1 involved_in IEA
IBA 		Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr12:517,941...528,677
Ensembl chr12:516,032...528,637 		JBrowse link
G PTPRU protein tyrosine phosphatase receptor type U involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:71,284,979...71,363,253
Ensembl chr 2:71,285,851...71,363,691 		JBrowse link
G SMAD7 SMAD family member 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:79,706,485...79,734,673
Ensembl chr 7:79,706,705...79,734,749 		JBrowse link
G TJP1 tight junction protein 1 involved_in ISO (PMID:25753039) ARUK-UCL PMID:25753039 NCBI chr 3:38,997,122...39,076,617
Ensembl chr 3:38,997,076...39,241,574 		JBrowse link
G WNT3A Wnt family member 3A acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr14:864,393...899,698
Ensembl chr14:863,424...896,412 		JBrowse link
G WNT5A Wnt family member 5A acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr20:34,756,430...34,790,937
Ensembl chr20:34,769,930...34,786,673 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 22130
    cellular process 21661
      cell adhesion 1428
        regulation of cell adhesion 837
          regulation of cell-cell adhesion 509
            regulation of cell-cell adhesion mediated by cadherin 20
              negative regulation of cell-cell adhesion mediated by cadherin 11
              positive regulation of cell-cell adhesion mediated by cadherin 9
Path 2
Term Annotations click to browse term
  biological_process 22130
    biological regulation 12562
      regulation of biological process 12180
        regulation of cellular process 11831
          regulation of cell adhesion 837
            regulation of cell-cell adhesion 509
              regulation of cell-cell adhesion mediated by cadherin 20
                negative regulation of cell-cell adhesion mediated by cadherin 11
                positive regulation of cell-cell adhesion mediated by cadherin 9
paths to the root