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ONTOLOGY REPORT - ANNOTATIONS

Term:regulation of postsynaptic density organization
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Accession:GO:1905874 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of postsynaptic density organization.
Synonyms:exact_synonym: regulation of PSD organization;   regulation of post synaptic density organization;   regulation of postsynaptic density organisation


show annotations for term's descendants           Sort by:
negative regulation of postsynaptic density organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cfl1 cofilin 1 IMP RGD PMID:26169356 RGD:11074527 NCBI chr 1:212,227,124...212,230,656
Ensembl chr 1:202,786,627...202,817,587 		JBrowse link
regulation of postsynaptic density assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abi3bp ABI family member 3 binding protein involved_in IMP PMID:22485184 ARUK-UCL PMID:22485184 RGD:42721990 NCBI chr11:43,912,187...44,128,888
Ensembl chr11:43,913,043...44,128,929 		JBrowse link
G Caskin1 CASK interacting protein 1 involved_in ISO
IEA 		(PMID:31727973)
GO_REF:0000107 		RGD
Ensembl		 PMID:31727973 GO_REF:0000107 NCBI chr10:13,512,684...13,533,380
Ensembl chr10:13,513,465...13,533,377 		JBrowse link
G Cbln1 cerebellin 1 precursor involved_in ISO
IEA 		(PMID:20395510)
GO_REF:0000107 		RGD
Ensembl		 PMID:20395510 GO_REF:0000107 NCBI chr19:19,608,763...19,612,572
Ensembl chr19:19,608,716...19,612,572 		JBrowse link
G Cript CXXC repeat containing interactor of PDZ3 domain involved_in IMP
IDA 		PMID:10570482 SynGO PMID:10570482 PMID:10570482 RGD:8554363, RGD:8554363 NCBI chr 6:7,581,428...7,589,384
Ensembl chr 6:7,580,703...7,589,399 		JBrowse link
G Fgfr1 Fibroblast growth factor receptor 1 involved_in ISO
IEA 		(PMID:32324534)
GO_REF:0000107 		RGD
Ensembl		 PMID:32324534 GO_REF:0000107 NCBI chr16:73,194,631...73,249,855
Ensembl chr16:66,494,042...66,547,350 		JBrowse link
G Grid2 glutamate ionotropic receptor delta type subunit 2 involved_in ISO
IEA 		(PMID:20395510)
GO_REF:0000107 		RGD
Ensembl		 PMID:20395510 GO_REF:0000107 NCBI chr 4:92,415,019...93,892,472
Ensembl chr 4:92,415,230...93,889,355 		JBrowse link
G Il1rap interleukin 1 receptor accessory protein involved_in ISO (PMID:22357843) RGD PMID:22357843 NCBI chr11:74,062,999...74,199,530
Ensembl chr11:74,070,304...74,199,530 		JBrowse link
G Lats1 large tumor suppressor kinase 1 involved_in IMP
IDA
EXP 		PMID:29317530 SynGO PMID:29317530 PMID:29317530 PMID:29317530 RGD:405650325, RGD:405650325, RGD:405650325 NCBI chr 1:2,160,411...2,193,640
Ensembl chr 1:2,160,411...2,193,640 		JBrowse link
G Lrfn1 leucine rich repeat and fibronectin type III domain containing 1 involved_in IMP
IDA 		PMID:16630835 SynGO PMID:16630835 PMID:16630835 RGD:13702351, RGD:13702351 NCBI chr 1:83,742,442...83,761,450
Ensembl chr 1:83,682,964...83,761,449 		JBrowse link
G Lrfn4 leucine rich repeat and fibronectin type III domain containing 4 involved_in IBA
IEA
ISO 		GO_REF:0000033
GO_REF:0000107
(PMID:20410109) 		GO_Central
Ensembl
RGD		 PMID:20410109 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:201,888,569...201,891,861
Ensembl chr 1:201,888,569...201,891,861 		JBrowse link
G Lrrc4b leucine rich repeat containing 4B involved_in IMP
IBA
IDA 		PMID:19252495
GO_REF:0000033 		GO_Central PMID:19252495 PMID:19252495 GO_REF:0000033, RGD:13702321, RGD:13702321 NCBI chr 1:94,922,034...94,956,309
Ensembl chr 1:94,935,603...94,956,263 		JBrowse link
G Lrrtm1 leucine rich repeat transmembrane neuronal 1 involved_in IMP
IDA 		PMID:19285470 SynGO PMID:19285470 PMID:19285470 RGD:8554788, RGD:8554788 NCBI chr 4:109,701,815...109,718,924
Ensembl chr 4:109,701,815...109,717,184 		JBrowse link
G Lrrtm2 leucine rich repeat transmembrane neuronal 2 involved_in IDA
IMP 		PMID:19285470 SynGO PMID:19285470 PMID:19285470 RGD:8554788, RGD:8554788 NCBI chr18:26,817,816...26,822,864
Ensembl chr18:26,817,816...26,822,864 		JBrowse link
G Nlgn1 neuroligin 1 involved_in ISO (PMID:32324534) RGD PMID:32324534 NCBI chr 2:110,184,987...111,110,316
Ensembl chr 2:108,257,824...109,002,464 		JBrowse link
G Nrxn1 neurexin 1 involved_in IEA
ISO 		GO_REF:0000107
(PMID:21410790) 		Ensembl
RGD		 PMID:21410790 GO_REF:0000107 NCBI chr 6:8,931,360...10,077,381
Ensembl chr 6:3,177,897...4,322,710 		JBrowse link
G Prickle1 prickle planar cell polarity protein 1 involved_in ISO
IEA 		(PMID:34613779)
GO_REF:0000107 		RGD
Ensembl		 PMID:34613779 GO_REF:0000107 NCBI chr 7:126,518,587...126,614,581
Ensembl chr 7:124,639,142...124,658,113 		JBrowse link
G Prickle2 prickle planar cell polarity protein 2 involved_in ISO (PMID:23711981), (PMID:34613779) RGD PMID:23711981 PMID:34613779 NCBI chr 4:124,869,655...125,214,862
Ensembl chr 4:124,869,552...125,214,824 		JBrowse link
G Ptk2b protein tyrosine kinase 2 beta involved_in ISO (PMID:28555636) RGD PMID:28555636 NCBI chr15:44,536,275...44,656,754
Ensembl chr15:40,360,723...40,481,282 		JBrowse link
G Ptprd protein tyrosine phosphatase, receptor type, D involved_in EXP
ISO
IDA 		PMID:29024665
(PMID:22357843) 		RGD PMID:22357843 PMID:29024665 PMID:29024665 RGD:13702141, RGD:13702141 NCBI chr 5:90,046,993...90,698,977
NCBI chr 5:91,122,354...91,641,754
Ensembl chr 5:90,048,966...92,369,396 		JBrowse link
G Ptprs protein tyrosine phosphatase, receptor type, S involved_in IDA
EXP
IMP
ISO 		PMID:21262467
(PMID:21262467) 		RGD PMID:21262467 PMID:21262467 PMID:21262467 PMID:21262467 RGD:13702219, RGD:13702219, RGD:13702219 NCBI chr 9:1,245,408...1,307,015
Ensembl chr 9:1,245,410...1,306,947 		JBrowse link
G Sipa1l1 signal-induced proliferation-associated 1 like 1 involved_in IMP
IDA 		PMID:11502259 SynGO PMID:11502259 PMID:11502259 RGD:8554032, RGD:8554032 NCBI chr 6:101,839,351...102,118,408
Ensembl chr 6:101,839,404...102,116,950 		JBrowse link
regulation of postsynaptic density protein 95 clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdh2 cadherin 2 involved_in IEA
ISO 		GO_REF:0000107
(PMID:20534458) 		Ensembl
RGD		 PMID:20534458 GO_REF:0000107 NCBI chr18:8,051,097...8,265,288
Ensembl chr18:7,776,704...7,990,167 		JBrowse link
G Cript CXXC repeat containing interactor of PDZ3 domain involved_in IMP PMID:10570482 UniProt PMID:10570482 RGD:8554363 NCBI chr 6:7,581,428...7,589,384
Ensembl chr 6:7,580,703...7,589,399 		JBrowse link
G Dbn1 drebrin 1 IMP RGD PMID:12878700 RGD:10398728 NCBI chr17:9,150,608...9,164,982
Ensembl chr17:9,150,659...9,164,984 		JBrowse link
G Slc30a1 solute carrier family 30 member 1 IMP RGD PMID:25319628 RGD:11057402 NCBI chr13:106,022,019...106,025,892
Ensembl chr13:103,491,037...103,494,910 		JBrowse link
G Zmynd8 zinc finger, MYND-type containing 8 IMP RGD PMID:24117785 RGD:8554267 NCBI chr 3:154,528,917...154,629,532
Ensembl chr 3:154,529,043...154,628,463 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20543
    cellular process 19534
      regulation of cellular process 13032
        regulation of cellular component organization 2713
          regulation of organelle organization 1218
            regulation of postsynaptic density organization 26
              negative regulation of postsynaptic density organization + 1
              positive regulation of postsynaptic density organization + 0
              regulation of postsynaptic density assembly + 21
              regulation of postsynaptic density protein 95 clustering 5
Path 2
Term Annotations click to browse term
  biological_process 20543
    cellular process 19534
      cellular component organization or biogenesis 7114
        cellular component organization 6827
          cell junction organization 989
            synapse organization 709
              postsynapse organization 339
                postsynaptic specialization organization 85
                  postsynaptic density organization 68
                    regulation of postsynaptic density organization 26
                      negative regulation of postsynaptic density organization + 1
                      positive regulation of postsynaptic density organization + 0
                      regulation of postsynaptic density assembly + 21
                      regulation of postsynaptic density protein 95 clustering 5
paths to the root