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ONTOLOGY REPORT - ANNOTATIONS

Term:regulation of synapse pruning
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Accession:GO:1905806 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of synapse pruning.
Synonyms:exact_synonym: regulation of synapse clearance;   regulation of synapse disassembly;   regulation of synapse elimination;   regulation of synapse removal


show annotations for term's descendants           Sort by:
regulation of synapse pruning term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adgrb3 adhesion G protein-coupled receptor B3 involved_in ISO
IEA		 (PMID:25611509)
GO_REF:0000107		 RGD
Ensembl		 PMID:25611509 GO_REF:0000107 NCBI chr 9:34,917,474...35,645,350
Ensembl chr 9:27,421,168...28,148,855 		JBrowse link
G Adgrg1 adhesion G protein-coupled receptor G1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr19:10,009,983...10,047,138
Ensembl chr19:10,003,975...10,041,108 		JBrowse link
G C1ql1 complement C1q like 1 involved_in ISO
IEA		 (PMID:25611509)
GO_REF:0000107		 RGD
Ensembl		 PMID:25611509 GO_REF:0000107 NCBI chr10:88,402,219...88,409,649
Ensembl chr10:87,902,137...87,909,310 		JBrowse link
G Cd47 Cd47 molecule involved_in ISO (PMID:30308165) RGD PMID:30308165 NCBI chr11:64,374,816...64,438,763
Ensembl chr11:50,906,177...50,969,425 		JBrowse link
G Cdk5 cyclin-dependent kinase 5 involved_in IDA
IMP
EXP		 PMID:17143272 SynGO PMID:17143272 PMID:17143272 PMID:17143272 RGD:8554385, RGD:8554385, RGD:8554385 NCBI chr 4:11,647,098...11,651,606
Ensembl chr 4:10,754,687...10,760,112 		JBrowse link
G Epha4 Eph receptor A4 involved_in IMP
IEP
EXP
IDA		 PMID:17143272 SynGO PMID:17143272 PMID:17143272 PMID:17143272 PMID:17143272 RGD:8554385, RGD:8554385, RGD:8554385, RGD:8554385 NCBI chr 9:86,263,982...86,406,744
Ensembl chr 9:78,815,460...78,958,139 		JBrowse link
G Itgb1 integrin subunit beta 1 involved_in ISO (PMID:24831527) RGD PMID:24831527 NCBI chr19:73,602,277...73,650,271
Ensembl chr19:56,705,171...56,753,195 		JBrowse link
G Ngef neuronal guanine nucleotide exchange factor involved_in ISO
IEA		 (PMID:17143272)
GO_REF:0000107		 RGD
Ensembl		 PMID:17143272 GO_REF:0000107 NCBI chr 9:95,594,823...95,692,381
Ensembl chr 9:88,146,956...88,244,914 		JBrowse link
G Plxnc1 plexin C1 involved_in ISO
IEA		 (PMID:24831527)
GO_REF:0000107		 RGD
Ensembl		 PMID:24831527 GO_REF:0000107 NCBI chr 7:31,276,978...31,430,823
Ensembl chr 7:29,390,048...29,543,779 		JBrowse link
G Sarm1 sterile alpha and TIR motif containing 1 involved_in ISO
IEA		 (PMID:22678360)
GO_REF:0000107		 RGD
Ensembl		 PMID:22678360 GO_REF:0000107 NCBI chr10:63,867,503...63,890,872
Ensembl chr10:63,369,456...63,392,822 		JBrowse link
G Vangl2 VANGL planar cell polarity protein 2 involved_in ISO
IEA		 (PMID:34407949)
GO_REF:0000107		 RGD
Ensembl		 PMID:34407949 GO_REF:0000107 NCBI chr13:86,995,124...87,021,770
Ensembl chr13:84,465,527...84,489,378 		JBrowse link
positive regulation of synapse pruning term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in ISO
IEA		 (PMID:33097708)
GO_REF:0000107		 RGD
Ensembl		 PMID:33097708 GO_REF:0000107 NCBI chr 9:20,145,215...20,151,797
Ensembl chr 9:12,647,259...12,654,170 		JBrowse link
regulation of excitatory synapse pruning term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kcnk13 potassium two pore domain channel subfamily K member 13 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:34642249)		 UniProt
Ensembl
RGD		 PMID:34642249 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:124,970,363...125,074,919
Ensembl chr 6:119,242,188...119,345,240 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20567
    biological regulation 13841
      regulation of biological quality 3470
        regulation of synapse structure or activity 421
          regulation of synapse organization 414
            regulation of synapse pruning 13
              negative regulation of synapse pruning + 0
              positive regulation of synapse pruning 1
              regulation of excitatory synapse pruning + 1
Path 2
Term Annotations click to browse term
  biological_process 20567
    cellular process 19557
      cellular component organization or biogenesis 7115
        cellular component organization 6828
          cellular component disassembly 464
            cell junction disassembly 35
              synapse pruning 19
                regulation of synapse pruning 13
                  negative regulation of synapse pruning + 0
                  positive regulation of synapse pruning 1
                  regulation of excitatory synapse pruning + 1
paths to the root