Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

ONTOLOGY REPORT - ANNOTATIONS

Term:regulation of cardiocyte differentiation
go back to main search page
Accession:GO:1905207 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of cardiocyte differentiation.
Synonyms:exact_synonym: regulation of cardiac cell differentiation;   regulation of heart cell differentiation


show annotations for term's descendants           Sort by:
negative regulation of cardiac muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp2 bone morphogenetic protein 2 involved_in ISO
IEA
ISS		 (PMID:18545679)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:18545679 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:141,264,648...141,275,416
Ensembl chr 3:120,812,882...120,821,397 		JBrowse link
G Ccnd2 cyclin D2 IDA RGD PMID:27302109 RGD:151660350 NCBI chr 4:161,653,048...161,675,422
Ensembl chr 4:159,962,363...159,989,495 		JBrowse link
G Dkk1 dickkopf WNT signaling pathway inhibitor 1 involved_in ISO (PMID:20559569) RGD PMID:20559569 NCBI chr 1:237,794,969...237,798,650
Ensembl chr 1:228,381,521...228,385,202 		JBrowse link
G Dll1 delta like canonical Notch ligand 1 involved_in ISO (PMID:18371447) RGD PMID:18371447 NCBI chr 1:64,985,161...64,993,274
Ensembl chr 1:56,312,066...56,320,179 		JBrowse link
G Frs2 fibroblast growth factor receptor substrate 2 involved_in ISO
IEA		 UniProtKB:O75084 (PMID:23939491)
GO_REF:0000107		 RGD
Ensembl		 PMID:23939491 GO_REF:0000107 NCBI chr 7:54,597,182...54,678,656
Ensembl chr 7:52,711,257...52,792,743 		JBrowse link
G Fzd7 frizzled class receptor 7 involved_in ISO
IEA		 UniProtKB:Q8WU20 (PMID:23939491)
GO_REF:0000107		 RGD
Ensembl		 PMID:23939491 GO_REF:0000107 NCBI chr 9:68,425,538...68,428,357
Ensembl chr 9:60,930,875...60,935,781 		JBrowse link
G Hdac3 histone deacetylase 3 acts_upstream_of_or_within ISO
IEA		 (PMID:24565863)
GO_REF:0000107		 RGD
Ensembl		 PMID:24565863 GO_REF:0000107 NCBI chr18:30,021,847...30,041,061
Ensembl chr18:29,770,636...29,793,856 		JBrowse link
G Sox6 SRY-box transcription factor 6 involved_in ISO
IEA		 (PMID:20081117)
GO_REF:0000107		 RGD
Ensembl		 PMID:20081117 GO_REF:0000107 NCBI chr 1:169,723,306...170,334,846
Ensembl chr 1:169,729,194...170,277,386 		JBrowse link
negative regulation of cardiac muscle cell myoblast differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prickle1 prickle planar cell polarity protein 1 involved_in ISO
IEA		 (PMID:21199191)
GO_REF:0000107		 RGD
Ensembl		 PMID:21199191 GO_REF:0000107 NCBI chr 7:126,518,587...126,614,581
Ensembl chr 7:124,639,142...124,658,113 		JBrowse link
negative regulation of cardiac myofibril assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Smad4 SMAD family member 4 involved_in IEA
ISO		 GO_REF:0000107
(PMID:16151019)		 Ensembl
RGD		 PMID:16151019 GO_REF:0000107 NCBI chr18:69,518,988...69,549,684
Ensembl chr18:67,243,742...67,274,438 		JBrowse link
negative regulation of cardiac vascular smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hey2 hes-related family bHLH transcription factor with YRPW motif 2 involved_in IDA PMID:16151017 BHF-UCL PMID:16151017 RGD:8554320 NCBI chr 1:28,641,100...28,651,187
Ensembl chr 1:26,822,131...26,832,218 		JBrowse link
negative regulation of cardiocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Egfr epidermal growth factor receptor involved_in ISO (PMID:23069713) RGD PMID:23069713 NCBI chr14:95,378,626...95,551,358
Ensembl chr14:91,177,067...91,344,382 		JBrowse link
positive regulation of cardiac muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arrb2 arrestin, beta 2 involved_in ISO (PMID:24974728) RGD PMID:24974728 NCBI chr10:55,645,539...55,653,485
Ensembl chr10:55,146,818...55,154,850 		JBrowse link
G Efnb2 ephrin B2 involved_in ISO
IEA		 (PMID:17336907)
GO_REF:0000107		 RGD
Ensembl		 PMID:17336907 GO_REF:0000107 NCBI chr16:87,485,215...87,529,224
Ensembl chr16:80,783,417...80,824,391 		JBrowse link
G Gsk3b glycogen synthase kinase 3 beta involved_in ISO (PMID:24974728) RGD PMID:24974728 NCBI chr11:76,004,502...76,154,665
Ensembl chr11:62,504,316...62,648,646 		JBrowse link
G Kat2a lysine acetyltransferase 2A IMP RGD PMID:20835911 RGD:8693751 NCBI chr10:86,132,535...86,140,877
Ensembl chr10:85,632,216...85,640,166 		JBrowse link
G Mef2c myocyte enhancer factor 2C involved_in ISS
ISO		 GO_REF:0000024
(PMID:16680724)
(PMID:9857019)		 UniProt
RGD		 PMID:9857019 PMID:16680724 GO_REF:0000024 NCBI chr 2:15,708,732...15,871,639
Ensembl chr 2:13,993,438...14,132,880 		JBrowse link
G Mir1 microRNA 1 involved_in ISO (PMID:20081117), (PMID:23939491) RGD PMID:20081117 PMID:23939491 NCBI chr18:2,160,327...2,160,413 JBrowse link
G Mir1a-1 microRNA 1a-1 involved_in ISO (PMID:20081117), (PMID:23939491) RGD PMID:20081117 PMID:23939491 NCBI chr 3:187,864,685...187,864,769
Ensembl chr 3:167,487,117...167,487,201 		JBrowse link
G Mir204 microRNA 204 involved_in ISO (PMID:22982025) RGD PMID:22982025 NCBI chr 1:229,743,461...229,743,570
Ensembl chr 1:220,316,931...220,317,040 		JBrowse link
G Mir499a microRNA 499a involved_in ISO (PMID:20081117) RGD PMID:20081117 NCBI chr 3:164,570,612...164,570,676
Ensembl chr 3:144,110,469...144,110,533 		JBrowse link
G Myocd myocardin involved_in ISO (PMID:18451334) RGD PMID:18451334 NCBI chr10:50,332,356...50,426,819
Ensembl chr10:49,836,641...49,927,627 		JBrowse link
G Nrg1 neuregulin 1 involved_in ISO (PMID:17336907) RGD PMID:17336907 NCBI chr16:65,954,084...67,007,484
Ensembl chr16:59,250,854...60,296,884 		JBrowse link
G Tgfb1 transforming growth factor, beta 1 involved_in ISO
IEA		 (PMID:25163461)
GO_REF:0000107		 RGD
Ensembl		 PMID:25163461 GO_REF:0000107 NCBI chr 1:90,324,312...90,340,627
Ensembl chr 1:81,196,532...81,212,847 		JBrowse link
G Wnt3a Wnt family member 3A acts_upstream_of ISO
IEA		 (PMID:20559569)
GO_REF:0000107		 RGD
Ensembl		 PMID:20559569 GO_REF:0000107 NCBI chr10:44,533,734...44,577,919
Ensembl chr10:44,034,194...44,078,324 		JBrowse link
positive regulation of cardiac muscle fiber development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 involved_in ISO
IEA
ISS		 (PMID:20702560)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:20702560 GO_REF:0000024 GO_REF:0000107 NCBI chr15:22,098,191...22,113,145
Ensembl chr15:19,618,542...19,623,306 		JBrowse link
positive regulation of cardiac vascular smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gper1 G protein-coupled estrogen receptor 1 involved_in ISO (PMID:23840305) RGD PMID:23840305 NCBI chr12:20,331,073...20,336,527
Ensembl chr12:15,217,442...15,221,889 		JBrowse link
positive regulation of cardioblast differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhx36 DEAH-box helicase 36 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:26489465)		 UniProt
Ensembl
RGD		 PMID:26489465 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:149,006,089...149,044,192
Ensembl chr 2:146,856,469...146,894,572 		JBrowse link
G Nkx2-5 NK2 homeobox 5 involved_in IEA
ISO		 GO_REF:0000107
(PMID:11889119)		 Ensembl
RGD		 PMID:11889119 GO_REF:0000107 NCBI chr10:16,844,888...16,851,458
Ensembl chr10:16,344,159...16,346,934 		JBrowse link
G Tbx5 T-box transcription factor 5 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:11431700)		 UniProt
Ensembl
RGD		 PMID:11431700 GO_REF:0000024 GO_REF:0000107 NCBI chr12:36,686,344...36,739,253
Ensembl chr12:36,688,014...36,734,885 		JBrowse link
G Tgfb2 transforming growth factor, beta 2 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:15896309)		 AgBase
Ensembl
RGD		 PMID:15896309 GO_REF:0000024 GO_REF:0000107 NCBI chr13:100,691,540...100,793,227
Ensembl chr13:98,160,087...98,261,405 		JBrowse link
positive regulation of cardiocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abi3bp ABI family member 3 binding protein involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr11:43,912,187...44,128,888
Ensembl chr11:43,913,043...44,128,929 		JBrowse link
G Mir133a1 microRNA 133a-1 involved_in ISO (PMID:23069713) RGD PMID:23069713 NCBI chr18:1,885,082...1,885,168 JBrowse link
G Mir3582 microRNA 3582 involved_in ISO (PMID:23069713) RGD PMID:23069713 NCBI chr18:2,157,853...2,157,970
Ensembl chr18:1,885,063...1,885,180 		JBrowse link
regulation of cardiac cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sox17 SRY-box transcription factor 17 involved_in ISO
IEA		 (PMID:17360443)
GO_REF:0000107		 RGD
Ensembl		 PMID:17360443 GO_REF:0000107 NCBI chr 5:19,814,345...19,819,859
Ensembl chr 5:15,016,731...15,022,228 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20558
    developmental process 7149
      regulation of developmental process 2781
        regulation of cell differentiation 1788
          regulation of cardiocyte differentiation 35
            negative regulation of cardiocyte differentiation + 12
            positive regulation of cardiocyte differentiation + 22
            regulation of cardiac cell fate specification + 1
            regulation of cardiac muscle cell differentiation + 23
            regulation of cardiac vascular smooth muscle cell differentiation + 2
            regulation of cardioblast differentiation + 5
            regulation of endocardial cushion cell differentiation + 0
Path 2
Term Annotations click to browse term
  biological_process 20558
    developmental process 7149
      anatomical structure development 6646
        multicellular organism development 5353
          system development 4635
            circulatory system development 1387
              heart development 750
                cardiocyte differentiation 210
                  regulation of cardiocyte differentiation 35
                    negative regulation of cardiocyte differentiation + 12
                    positive regulation of cardiocyte differentiation + 22
                    regulation of cardiac cell fate specification + 1
                    regulation of cardiac muscle cell differentiation + 23
                    regulation of cardiac vascular smooth muscle cell differentiation + 2
                    regulation of cardioblast differentiation + 5
                    regulation of endocardial cushion cell differentiation + 0
paths to the root