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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of gastro-intestinal system smooth muscle contraction
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Accession:GO:1904304 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of gastro-intestinal system smooth muscle contraction.



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negative regulation of small intestine smooth muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kcnma1 potassium calcium-activated channel subfamily M alpha 1 IMP RGD PMID:23647678 RGD:10412032 NCBI chr15:351,065...1,057,117
Ensembl chr15:302,214...1,001,198
JBrowse link
G Ptger3 prostaglandin E receptor 3 IDA RGD PMID:11991626 RGD:10003093 NCBI chr 2:249,264,985...249,409,966
Ensembl chr 2:246,606,183...246,684,434
JBrowse link
G Ptger4 prostaglandin E receptor 4 IDA RGD PMID:11991626 RGD:10003093 NCBI chr 2:56,061,699...56,074,594
Ensembl chr 2:54,335,424...54,346,670
JBrowse link
positive regulation of colon smooth muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kit KIT proto-oncogene receptor tyrosine kinase IMP RGD PMID:17322067 RGD:12910822 NCBI chr14:32,901,615...32,978,895
Ensembl chr14:32,548,877...32,624,652
JBrowse link
G Ptger3 prostaglandin E receptor 3 IMP RGD PMID:24170253 RGD:10043193 NCBI chr 2:249,264,985...249,409,966
Ensembl chr 2:246,606,183...246,684,434
JBrowse link
positive regulation of gastro-intestinal system smooth muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ghrl ghrelin and obestatin prepropeptide IDA RGD PMID:15890336 RGD:12907565 NCBI chr 4:148,421,315...148,431,128
Ensembl chr 4:146,865,712...146,869,621
JBrowse link
G Ptafr platelet-activating factor receptor IMP RGD PMID:10821044 RGD:10043148 NCBI chr 5:150,049,322...150,079,060
Ensembl chr 5:144,765,976...144,795,251
JBrowse link
G Spx spexin hormone involved_in ISO
IBA
ISS
(PMID:17284679)
GO_REF:0000033
RGD
GO_Central
PMID:17284679 PMID:17284679 GO_REF:0000033, RGD:12907558 NCBI chr 4:177,087,053...177,093,091
Ensembl chr 4:175,356,247...175,362,082
JBrowse link
positive regulation of pyloric antrum smooth muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kit KIT proto-oncogene receptor tyrosine kinase IMP RGD PMID:9832052 RGD:12910753 NCBI chr14:32,901,615...32,978,895
Ensembl chr14:32,548,877...32,624,652
JBrowse link
positive regulation of small intestine smooth muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ghrl ghrelin and obestatin prepropeptide IDA RGD PMID:15890336 PMID:21874246 RGD:12907565, RGD:12910732 NCBI chr 4:148,421,315...148,431,128
Ensembl chr 4:146,865,712...146,869,621
JBrowse link
G Ghsr growth hormone secretagogue receptor IMP RGD PMID:21874246 PMID:15890336 RGD:12910732, RGD:12907565 NCBI chr 2:112,196,158...112,201,666
Ensembl chr 2:110,268,489...110,271,865
JBrowse link
G Kit KIT proto-oncogene receptor tyrosine kinase IMP RGD PMID:7542218 RGD:12910748 NCBI chr14:32,901,615...32,978,895
Ensembl chr14:32,548,877...32,624,652
JBrowse link
positive regulation of stomach fundus smooth muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nmu neuromedin U involved_in IDA PMID:2055247 UniProt PMID:2055247 RGD:13461751 NCBI chr14:32,198,789...32,226,397
Ensembl chr14:31,844,728...31,872,192
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20536
    multicellular organismal process 8969
      system process 3558
        muscle system process 485
          muscle contraction 344
            regulation of muscle contraction 175
              regulation of smooth muscle contraction 74
                regulation of gastro-intestinal system smooth muscle contraction 9
                  negative regulation of gastro-intestinal system smooth muscle contraction + 3
                  positive regulation of gastro-intestinal system smooth muscle contraction + 7
                  regulation of colon smooth muscle contraction + 2
                  regulation of pyloric antrum smooth muscle contraction + 1
                  regulation of small intestine smooth muscle contraction + 6
                  regulation of stomach fundus smooth muscle contraction + 1
Path 2
Term Annotations click to browse term
  biological_process 20536
    biological regulation 13822
      regulation of biological process 13376
        regulation of multicellular organismal process 3340
          regulation of system process 683
            regulation of muscle system process 282
              regulation of muscle contraction 175
                regulation of smooth muscle contraction 74
                  regulation of gastro-intestinal system smooth muscle contraction 9
                    negative regulation of gastro-intestinal system smooth muscle contraction + 3
                    positive regulation of gastro-intestinal system smooth muscle contraction + 7
                    regulation of colon smooth muscle contraction + 2
                    regulation of pyloric antrum smooth muscle contraction + 1
                    regulation of small intestine smooth muscle contraction + 6
                    regulation of stomach fundus smooth muscle contraction + 1
paths to the root