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ONTOLOGY REPORT - ANNOTATIONS

Term:negative regulation of RNA catabolic process
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Accession:GO:1902369 term browser browse the term
Definition:Any process that stops, prevents or reduces the frequency, rate or extent of RNA catabolic process.
Synonyms:exact_synonym: down regulation of RNA breakdown;   down regulation of RNA catabolic process;   down regulation of RNA catabolism;   down regulation of RNA degradation;   downregulation of RNA breakdown;   downregulation of RNA catabolic process;   downregulation of RNA catabolism;   downregulation of RNA degradation;   negative regulation of RNA breakdown;   negative regulation of RNA catabolism;   negative regulation of RNA degradation
 narrow_synonym: inhibition of RNA breakdown;   inhibition of RNA catabolic process;   inhibition of RNA catabolism;   inhibition of RNA degradation


show annotations for term's descendants           Sort by:
negative regulation of RNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nrde2 NRDE-2, necessary for RNA interference, domain containing involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:119,405,103...119,446,861
Ensembl chr 6:119,404,334...119,448,915 		JBrowse link
3'-UTR-mediated mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Angel2 angel homolog 2 involved_in ISO
IEA
IBA		 (PMID:22547059)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:22547059 GO_REF:0000033 GO_REF:0000107 NCBI chr13:102,509,111...102,529,501
Ensembl chr13:102,510,589...102,529,493 		JBrowse link
G Boll boule homolog, RNA binding protein involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:56,734,890...56,859,917
Ensembl chr 9:56,733,584...56,859,916 		JBrowse link
G Dazl deleted in azoospermia-like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:18,193,363...18,210,100
Ensembl chr 9:10,695,592...10,712,323 		JBrowse link
G Elavl1 ELAV like RNA binding protein 1 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:27616329)
(PMID:14517288), (PMID:19029303), (PMID:26489465), (PMID:29180010)		 UniProt
Ensembl
RGD		 PMID:14517288 PMID:19029303 PMID:26489465 PMID:27616329 PMID:29180010 GO_REF:0000024 GO_REF:0000107 NCBI chr12:7,441,699...7,482,625
Ensembl chr12:2,645,061...2,684,784 		JBrowse link
G Elavl4 ELAV like RNA binding protein 4 involved_in ISO
IEA
ISS		 (PMID:12034726)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:12034726 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:130,285,418...130,429,106
Ensembl chr 5:125,056,848...125,200,446 		JBrowse link
G Hnrnpa0 heterogeneous nuclear ribonucleoprotein A0 involved_in ISO
IBA		 (PMID:12456657)
GO_REF:0000033		 RGD
GO_Central		 PMID:12456657 GO_REF:0000033 NCBI chr17:6,513,129...6,515,786
Ensembl chr17:6,507,275...6,509,375 		JBrowse link
G Hnrnpc heterogeneous nuclear ribonucleoprotein C involved_in ISO (PMID:16010978) RGD PMID:16010978 NCBI chr15:27,253,098...27,282,779
Ensembl chr15:24,779,450...24,809,183 		JBrowse link
G Mapkapk2 MAPK activated protein kinase 2 involved_in ISO
IEA		 (PMID:14517288), (PMID:15014438), (PMID:20932473)
GO_REF:0000107		 RGD
Ensembl		 PMID:14517288 PMID:15014438 PMID:20932473 GO_REF:0000107 NCBI chr13:45,066,027...45,112,326
Ensembl chr13:42,513,762...42,560,457 		JBrowse link
G Myd88 MYD88, innate immune signal transduction adaptor involved_in ISO
IEA		 (PMID:15294994)
GO_REF:0000107		 RGD
Ensembl		 PMID:15294994 GO_REF:0000107 NCBI chr 8:127,952,161...127,956,230
Ensembl chr 8:119,074,437...119,079,415 		JBrowse link
G Nicol1 NELL2 interacting cell ontogeny regulator 1 involved_in ISO (PMID:38625739) RGD PMID:38625739 NCBI chr14:80,992,697...80,994,213
Ensembl chr14:76,768,146...76,773,575 		JBrowse link
G Ptbp1 polypyrimidine tract binding protein 1 IDA RGD PMID:11696543 RGD:10045987 NCBI chr 7:10,493,199...10,502,957
Ensembl chr 7:9,842,574...9,852,397 		JBrowse link
G Rbm10 RNA binding motif protein 10 acts_upstream_of_or_within ISO
IEA		 (PMID:19508861)
GO_REF:0000107		 RGD
Ensembl		 PMID:19508861 GO_REF:0000107 NCBI chr  X:4,093,914...4,126,060
Ensembl chr  X:1,540,398...1,572,575 		JBrowse link
G Rbm38 RNA binding motif protein 38 involved_in ISO (PMID:17050675) RGD PMID:17050675 NCBI chr 3:161,801,577...161,814,381
Ensembl chr 3:161,801,577...161,814,381 		JBrowse link
G Rbm47 RNA binding motif protein 47 involved_in ISO
IEA		 (PMID:34160127)
GO_REF:0000107
(PMID:29844590)		 RGD
Ensembl		 PMID:29844590 PMID:34160127 GO_REF:0000107 NCBI chr14:42,407,226...42,545,304
Ensembl chr14:42,154,142...42,189,431 		JBrowse link
G Tardbp TAR DNA binding protein involved_in ISO
IEA		 (PMID:17481916)
GO_REF:0000107		 RGD
Ensembl		 PMID:17481916 GO_REF:0000107 NCBI chr 5:164,330,452...164,348,435
Ensembl chr 5:159,051,799...159,062,055 		JBrowse link
G Tirap TIR domain containing adaptor protein involved_in ISO (PMID:15294994) RGD PMID:15294994 NCBI chr 8:41,789,557...41,805,903
Ensembl chr 8:33,531,725...33,547,432 		JBrowse link
G Zfp36 zinc finger protein 36 involved_in ISO
IEA
ISS		 (PMID:15014438)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:15014438 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:92,796,628...92,799,108
Ensembl chr 1:83,669,084...83,671,564 		JBrowse link
CRD-mediated mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Csde1 cold shock domain containing E1 involved_in ISO (PMID:11051545) RGD PMID:11051545 NCBI chr 2:193,234,546...193,271,301
Ensembl chr 2:190,554,980...190,582,784 		JBrowse link
G Dhx9 DExH-box helicase 9 involved_in ISO
IEA		 (PMID:19029303)
GO_REF:0000107		 RGD
Ensembl		 PMID:19029303 GO_REF:0000107 NCBI chr13:68,152,813...68,189,580
Ensembl chr13:65,602,323...65,639,069 		JBrowse link
G Hnrnpd heterogeneous nuclear ribonucleoprotein D involved_in ISO
IEA		 (PMID:11051545)
GO_REF:0000107		 RGD
Ensembl		 PMID:11051545 GO_REF:0000107 NCBI chr14:9,918,630...9,938,072
Ensembl chr14:9,615,479...9,633,786 		JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U involved_in IEA
ISO		 GO_REF:0000107
(PMID:19029303)		 Ensembl
RGD		 PMID:19029303 GO_REF:0000107 NCBI chr13:92,609,791...92,618,580
Ensembl chr13:90,074,181...90,086,588 		JBrowse link
G Igf2bp1 insulin-like growth factor 2 mRNA binding protein 1 involved_in ISS
IEA
IBA
ISO		 GO_REF:0000024
GO_REF:0000107
GO_REF:0000033
(PMID:19029303), (PMID:29476152)		 UniProt
Ensembl
GO_Central
RGD		 PMID:19029303 PMID:29476152 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr10:80,908,300...80,951,097
Ensembl chr10:80,908,076...80,951,129 		JBrowse link
G Igf2bp2 insulin-like growth factor 2 mRNA binding protein 2 involved_in ISO
IEA
IBA		 (PMID:29476152)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:29476152 GO_REF:0000033 GO_REF:0000107 NCBI chr11:92,378,908...92,478,893
Ensembl chr11:78,874,414...78,974,377 		JBrowse link
G Igf2bp3 insulin-like growth factor 2 mRNA binding protein 3 involved_in ISO
IEA
IBA		 (PMID:29476152)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:29476152 GO_REF:0000033 GO_REF:0000107 NCBI chr 4:79,391,367...79,525,923
Ensembl chr 4:78,060,494...78,194,865 		JBrowse link
G Pabpc1 poly(A) binding protein, cytoplasmic 1 involved_in ISO (PMID:11051545) RGD PMID:11051545 NCBI chr 7:69,662,513...69,674,806
Ensembl chr 7:67,777,381...67,789,744 		JBrowse link
G Paip1 poly(A) binding protein interacting protein 1 involved_in ISO
IEA		 (PMID:11051545)
GO_REF:0000107		 RGD
Ensembl		 PMID:11051545 GO_REF:0000107 NCBI chr 2:51,523,190...51,550,241
Ensembl chr 2:51,522,921...51,550,241 		JBrowse link
G Syncrip synaptotagmin binding, cytoplasmic RNA interacting protein involved_in ISO
IBA		 (PMID:11051545), (PMID:19029303)
GO_REF:0000033		 RGD
GO_Central		 PMID:11051545 PMID:19029303 GO_REF:0000033 NCBI chr 8:98,282,358...98,315,412
Ensembl chr 8:89,402,866...89,435,515 		JBrowse link
G Ybx1 Y box binding protein 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:19029303)		 UniProt
RGD		 PMID:19029303 GO_REF:0000024 NCBI chr 5:138,167,444...138,188,155
Ensembl chr 5:132,882,145...132,898,862 		JBrowse link
mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apobec1 apolipoprotein B mRNA editing enzyme catalytic subunit 1 acts_upstream_of_or_within ISO
IEA		 (PMID:15480992)
GO_REF:0000107		 RGD
Ensembl		 PMID:15480992 GO_REF:0000107 NCBI chr 4:157,472,879...157,500,496
Ensembl chr 4:155,800,887...155,827,390 		JBrowse link
G Axin2 axin 2 involved_in IEA
ISO		 GO_REF:0000107
(PMID:17072303)		 Ensembl
RGD		 PMID:17072303 GO_REF:0000107 NCBI chr10:94,393,379...94,426,579
Ensembl chr10:93,899,245...93,926,231 		JBrowse link
G Cirbp cold inducible RNA binding protein involved_in ISS
ISO		 GO_REF:0000024
(PMID:11574538)		 UniProt
RGD		 PMID:11574538 GO_REF:0000024 NCBI chr 7:9,533,857...9,538,899
Ensembl chr 7:9,424,178...9,538,818 		JBrowse link
G Dicer1 dicer 1 ribonuclease III acts_upstream_of_or_within ISO MGI:3589208 (PMID:22844247) RGD PMID:22844247 NCBI chr 6:129,392,298...129,457,252
Ensembl chr 6:123,631,250...123,693,965 		JBrowse link
G Dnd1 DND microRNA-mediated repression inhibitor 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr18:28,652,712...28,655,336
Ensembl chr18:28,378,692...28,381,316 		JBrowse link
G E2f1 E2F transcription factor 1 involved_in ISO
IEA		 (PMID:15766563)
GO_REF:0000107		 RGD
Ensembl		 PMID:15766563 GO_REF:0000107 NCBI chr 3:163,524,739...163,535,563
Ensembl chr 3:143,049,478...143,075,361 		JBrowse link
G Eif4enif1 eukaryotic translation initiation factor 4E nuclear import factor 1 involved_in ISO
IEA		 (PMID:24335285), (PMID:32354837)
GO_REF:0000107		 RGD
Ensembl		 PMID:24335285 PMID:32354837 GO_REF:0000107 NCBI chr14:82,280,566...82,328,559
Ensembl chr14:78,056,297...78,098,793 		JBrowse link
G Elavl1 ELAV like RNA binding protein 1 involved_in
acts_upstream_of_or_within		 ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:24394384), (PMID:27609837)
(PMID:14976220), (PMID:21613615)
(PMID:21613615)
(PMID:19029303), (PMID:31358969)		 UniProt
Ensembl
RGD		 PMID:14976220 PMID:19029303 PMID:21613615 PMID:24394384 PMID:27609837 More... GO_REF:0000024 GO_REF:0000107 NCBI chr12:7,441,699...7,482,625
Ensembl chr12:2,645,061...2,684,784 		JBrowse link
G Fam76b family with sequence similarity 76, member B involved_in ISO
IEA		 (PMID:38421448)
GO_REF:0000107		 RGD
Ensembl		 PMID:38421448 GO_REF:0000107 NCBI chr 8:18,971,357...18,993,442
Ensembl chr 8:10,688,963...10,711,861 		JBrowse link
G Fbll1 fibrillarin-like 1 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr10:20,258,656...20,260,299
Ensembl chr10:20,258,656...20,260,299 		JBrowse link
G Fus Fus RNA binding protein acts_upstream_of_or_within ISO (PMID:27378374) RGD PMID:27378374 NCBI chr 1:192,007,011...192,020,887
Ensembl chr 1:182,576,545...182,590,414 		JBrowse link
G Gdnf glial cell derived neurotrophic factor involved_in ISO
IEA
ISS		 (PMID:12358785)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:12358785 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:58,621,327...58,647,242
Ensembl chr 2:56,895,010...56,917,209 		JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U involved_in ISO
IEA		 (PMID:17174306)
GO_REF:0000107		 RGD
Ensembl		 PMID:17174306 GO_REF:0000107 NCBI chr13:92,609,791...92,618,580
Ensembl chr13:90,074,181...90,086,588 		JBrowse link
G Ikbke inhibitor of nuclear factor kappa B kinase subunit epsilon involved_in ISO MGI:3707541 (PMID:21822257) RGD PMID:21822257 NCBI chr13:45,264,404...45,290,737
Ensembl chr13:42,712,159...42,737,143 		JBrowse link
G Larp1 La ribonucleoprotein 1, translational regulator involved_in ISO
IEA		 (PMID:25940091), (PMID:28673543)
GO_REF:0000002
GO_REF:0000107		 RGD
InterPro
Ensembl		 PMID:25940091 PMID:28673543 GO_REF:0000002 GO_REF:0000107 NCBI chr10:42,691,833...42,746,816
Ensembl chr10:42,191,325...42,243,371 		JBrowse link
G Larp1bl La ribonucleoprotein 1B like involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 2:123,969,408...124,031,645
Ensembl chr 2:124,008,367...124,030,654 		JBrowse link
G Mapkapk2 MAPK activated protein kinase 2 acts_upstream_of_or_within ISO
IEA		 MGI:2179724 (PMID:11741878)
GO_REF:0000107		 RGD
Ensembl		 PMID:11741878 GO_REF:0000107 NCBI chr13:45,066,027...45,112,326
Ensembl chr13:42,513,762...42,560,457 		JBrowse link
G Meioc meiosis specific with coiled-coil domain involved_in IBA
IEA
ISO		 GO_REF:0000033
GO_REF:0000107
(PMID:26742488)		 GO_Central
Ensembl
RGD		 PMID:26742488 GO_REF:0000033 GO_REF:0000107 NCBI chr10:88,128,939...88,147,833
Ensembl chr10:87,628,875...87,646,752 		JBrowse link
G Mettl14 methyltransferase 14, N6-adenosine-methyltransferase non-catalytic subunit involved_in ISO
IEA		 (PMID:29290617)
GO_REF:0000107		 RGD
Ensembl		 PMID:29290617 GO_REF:0000107 NCBI chr 2:214,215,165...214,231,412
Ensembl chr 2:211,530,602...211,546,821 		JBrowse link
G Mtor mechanistic target of rapamycin kinase IMP RGD PMID:21073857 RGD:10040969 NCBI chr 5:164,167,985...164,277,438
Ensembl chr 5:158,884,804...158,994,311 		JBrowse link
G Noct nocturnin involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:22073225)		 UniProt
Ensembl
RGD		 PMID:22073225 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:137,422,074...137,442,282
Ensembl chr 2:135,271,189...135,291,400 		JBrowse link
G Nrde2 NRDE-2, necessary for RNA interference, domain containing involved_in ISO
IEA		 (PMID:30842217)
GO_REF:0000107		 RGD
Ensembl		 PMID:30842217 GO_REF:0000107 NCBI chr 6:119,405,103...119,446,861
Ensembl chr 6:119,404,334...119,448,915 		JBrowse link
G Qki QKI, KH domain containing RNA binding involved_in IMP
ISO		 (PMID:32732889) RGD PMID:32732889 PMID:16855020 RGD:10045995 NCBI chr 1:52,935,357...53,047,338
Ensembl chr 1:50,387,698...50,498,831 		JBrowse link
G Rbm10 RNA binding motif protein 10 IMP RGD PMID:19508861 RGD:151667451 NCBI chr  X:4,093,914...4,126,060
Ensembl chr  X:1,540,398...1,572,575 		JBrowse link
G Rbm24 RNA binding motif protein 24 involved_in ISO
IBA		 (PMID:29104163)
GO_REF:0000033		 RGD
GO_Central		 PMID:29104163 GO_REF:0000033 NCBI chr17:18,275,681...18,288,231
Ensembl chr17:18,275,688...18,288,102 		JBrowse link
G Rbm46 RNA binding motif protein 46 acts_upstream_of_or_within ISO
IEA		 (PMID:25397698)
GO_REF:0000107		 RGD
Ensembl		 PMID:25397698 GO_REF:0000107 NCBI chr 2:170,496,383...170,548,101
Ensembl chr 2:168,198,463...168,242,011 		JBrowse link
G Secisbp2 SECIS binding protein 2 acts_upstream_of_or_within ISO
IEA		 (PMID:27956496)
GO_REF:0000107		 RGD
Ensembl		 PMID:27956496 GO_REF:0000107 NCBI chr17:13,538,513...13,569,573
Ensembl chr17:13,538,513...13,569,523 		JBrowse link
G Slc11a1 solute carrier family 11 member 1 acts_upstream_of_or_within ISO
IEA		 MGI:1857755 (PMID:9009318)
GO_REF:0000107		 RGD
Ensembl		 PMID:9009318 GO_REF:0000107 NCBI chr 9:83,406,327...83,417,252
Ensembl chr 9:75,957,316...75,968,101 		JBrowse link
G Srsf1 serine and arginine rich splicing factor 1 involved_in ISO
IEA		 (PMID:21822258)
GO_REF:0000107		 RGD
Ensembl		 PMID:21822258 GO_REF:0000107 NCBI chr10:73,335,519...73,342,549
Ensembl chr10:72,839,274...72,845,336 		JBrowse link
G Taf15 TATA-box binding protein associated factor 15 acts_upstream_of_or_within ISO (PMID:27378374) RGD PMID:27378374 NCBI chr10:68,770,408...68,802,458
Ensembl chr10:68,272,969...68,304,949 		JBrowse link
G Tent5a terminal nucleotidyltransferase 5A involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:95,102,349...95,109,100
Ensembl chr 8:86,225,357...86,229,045 		JBrowse link
G Tent5b terminal nucleotidyltransferase 5B involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:145,695,358...145,702,668
Ensembl chr 5:145,695,362...145,706,073
Ensembl chr11:145,695,362...145,706,073 		JBrowse link
G Tent5c terminal nucleotidyltransferase 5C involved_in ISO
IBA
IEA
ISS		 (PMID:28931820)
GO_REF:0000033
GO_REF:0000107
GO_REF:0000024		 RGD
GO_Central
Ensembl
UniProt		 PMID:28931820 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:187,853,026...187,875,260
Ensembl chr 2:187,853,024...187,894,744 		JBrowse link
G Tent5d terminal nucleotidyltransferase 5D involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:72,901,287...72,974,562
Ensembl chr  X:72,901,241...72,970,573 		JBrowse link
G Thrap3 thyroid hormone receptor associated protein 3 involved_in ISO
IEA
ISS		 (PMID:18794151)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:18794151 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:143,729,821...143,772,105
Ensembl chr 5:138,445,295...138,487,477 		JBrowse link
G Traf2 Tnf receptor-associated factor 2 involved_in ISO
IEA		 (PMID:21822258)
GO_REF:0000107		 RGD
Ensembl		 PMID:21822258 GO_REF:0000107 NCBI chr 3:28,740,098...28,764,752
Ensembl chr 3:8,341,951...8,366,538 		JBrowse link
G Traf3ip2 Traf3 interacting protein 2 involved_in ISO (PMID:17785852), (PMID:21822258) RGD PMID:17785852 PMID:21822258 NCBI chr20:44,565,992...44,609,240
Ensembl chr20:43,011,450...43,054,667 		JBrowse link
G Traf5 TNF receptor-associated factor 5 involved_in ISO
IEA		 (PMID:21822258)
GO_REF:0000107		 RGD
Ensembl		 PMID:21822258 GO_REF:0000107 NCBI chr13:106,100,921...106,149,724
Ensembl chr13:103,572,314...103,618,709 		JBrowse link
G Vegfa vascular endothelial growth factor A IDA RGD PMID:12881220 RGD:1580563 NCBI chr 9:22,452,854...22,468,194
Ensembl chr 9:14,955,300...14,970,641 		JBrowse link
G Vip vasoactive intestinal peptide involved_in ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr 1:44,470,232...44,478,561
Ensembl chr 1:42,065,120...42,073,216 		JBrowse link
G Ybx1 Y box binding protein 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:31358969)		 UniProt
RGD		 PMID:31358969 GO_REF:0000024 NCBI chr 5:138,167,444...138,188,155
Ensembl chr 5:132,882,145...132,898,862 		JBrowse link
G Ybx2 Y box binding protein 2 acts_upstream_of_or_within ISO MGI:3576937 (PMID:17035640) RGD PMID:17035640 NCBI chr10:55,158,420...55,164,077
Ensembl chr10:54,659,719...54,665,371 		JBrowse link
G Zar1 zygote arrest 1 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:36264786)		 UniProt
Ensembl
RGD		 PMID:36264786 GO_REF:0000024 GO_REF:0000107 NCBI chr14:35,193,446...35,197,382
Ensembl chr14:35,193,446...35,197,382 		JBrowse link
G Zc3h14 zinc finger CCCH type containing 14 involved_in ISS
ISO		 GO_REF:0000024
(PMID:27563065)		 UniProt
RGD		 PMID:27563065 GO_REF:0000024 NCBI chr 6:118,006,420...118,044,480
Ensembl chr 6:118,006,458...118,044,105 		JBrowse link
negative regulation of 3'-UTR-mediated mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mettl16 methyltransferase 16, RNA N6-adenosine involved_in ISO
IEA		 (PMID:28525753)
GO_REF:0000107		 RGD
Ensembl		 PMID:28525753 GO_REF:0000107 NCBI chr10:59,640,915...59,697,291
Ensembl chr10:59,640,972...59,687,061 		JBrowse link
G Qki QKI, KH domain containing RNA binding involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:31868295)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:31868295 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:52,935,357...53,047,338
Ensembl chr 1:50,387,698...50,498,831 		JBrowse link
G Zfp36 zinc finger protein 36 involved_in ISO
IEA		 (PMID:21606497)
GO_REF:0000107		 RGD
Ensembl		 PMID:21606497 GO_REF:0000107 NCBI chr 1:92,796,628...92,799,108
Ensembl chr 1:83,669,084...83,671,564 		JBrowse link
negative regulation of deadenylation-dependent decapping of nuclear-transcribed mRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eif4enif1 eukaryotic translation initiation factor 4E nuclear import factor 1 involved_in ISO
IEA		 (PMID:32354837)
GO_REF:0000107		 RGD
Ensembl		 PMID:32354837 GO_REF:0000107 NCBI chr14:82,280,566...82,328,559
Ensembl chr14:78,056,297...78,098,793 		JBrowse link
negative regulation of miRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Qki QKI, KH domain containing RNA binding involved_in ISS
ISO		 GO_REF:0000024
(PMID:31792053)		 UniProt
RGD		 PMID:31792053 GO_REF:0000024 NCBI chr 1:52,935,357...53,047,338
Ensembl chr 1:50,387,698...50,498,831 		JBrowse link
G Tent2 terminal nucleotidyltransferase 2 involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:23200856), (PMID:31792053)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:23200856 PMID:31792053 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:26,115,150...26,167,465
Ensembl chr 2:24,380,225...24,432,099 		JBrowse link
negative regulation of mitochondrial RNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrpprc leucine-rich pentatricopeptide repeat containing acts_upstream_of_or_within ISO
IEA		 MGI:1916394|MGI:3857306|MGI:5438913 (PMID:21880015), (PMID:22045337)
GO_REF:0000107		 RGD
Ensembl		 PMID:21880015 PMID:22045337 GO_REF:0000107 NCBI chr 6:15,612,638...15,695,113
Ensembl chr 6:9,859,867...9,942,293 		JBrowse link
G Slirp SRA stem-loop interacting RNA binding protein acts_upstream_of_or_within ISO MGI:1919666 (PMID:22045337) RGD PMID:22045337 NCBI chr 6:107,088,760...107,097,791
Ensembl chr 6:107,088,403...107,097,791 		JBrowse link
negative regulation of mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fxr1 FMR1 autosomal homolog 1 involved_in ISO (PMID:25225333) RGD PMID:25225333 NCBI chr 2:118,812,287...118,865,813
Ensembl chr 2:116,884,248...116,937,590 		JBrowse link
G Pkp1 plakophilin 1 involved_in ISO
IEA		 (PMID:25225333)
GO_REF:0000107		 RGD
Ensembl		 PMID:25225333 GO_REF:0000107 NCBI chr13:49,861,340...49,909,162
Ensembl chr13:47,309,614...47,357,465 		JBrowse link
G Pkp3 plakophilin 3 involved_in ISO (PMID:25225333) RGD PMID:25225333 NCBI chr 1:196,187,914...196,198,843
Ensembl chr 1:196,187,835...196,198,844 		JBrowse link
negative regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Csde1 cold shock domain containing E1 involved_in ISO (PMID:11051545) RGD PMID:11051545 NCBI chr 2:193,234,546...193,271,301
Ensembl chr 2:190,554,980...190,582,784 		JBrowse link
G Dhx9 DExH-box helicase 9 involved_in ISO
IEA		 (PMID:19029303)
GO_REF:0000107		 RGD
Ensembl		 PMID:19029303 GO_REF:0000107 NCBI chr13:68,152,813...68,189,580
Ensembl chr13:65,602,323...65,639,069 		JBrowse link
G Hnrnpd heterogeneous nuclear ribonucleoprotein D involved_in ISO
IEA		 (PMID:11051545)
GO_REF:0000107		 RGD
Ensembl		 PMID:11051545 GO_REF:0000107 NCBI chr14:9,918,630...9,938,072
Ensembl chr14:9,615,479...9,633,786 		JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U involved_in ISO
IEA		 (PMID:19029303)
GO_REF:0000107		 RGD
Ensembl		 PMID:19029303 GO_REF:0000107 NCBI chr13:92,609,791...92,618,580
Ensembl chr13:90,074,181...90,086,588 		JBrowse link
G Igf2bp1 insulin-like growth factor 2 mRNA binding protein 1 involved_in ISO
IEA		 (PMID:19029303)
GO_REF:0000107		 RGD
Ensembl		 PMID:19029303 GO_REF:0000107 NCBI chr10:80,908,300...80,951,097
Ensembl chr10:80,908,076...80,951,129 		JBrowse link
G Pabpc1 poly(A) binding protein, cytoplasmic 1 involved_in ISO (PMID:11051545) RGD PMID:11051545 NCBI chr 7:69,662,513...69,674,806
Ensembl chr 7:67,777,381...67,789,744 		JBrowse link
G Paip1 poly(A) binding protein interacting protein 1 involved_in ISO
IEA		 (PMID:11051545)
GO_REF:0000107		 RGD
Ensembl		 PMID:11051545 GO_REF:0000107 NCBI chr 2:51,523,190...51,550,241
Ensembl chr 2:51,522,921...51,550,241 		JBrowse link
G Syncrip synaptotagmin binding, cytoplasmic RNA interacting protein involved_in ISO (PMID:11051545), (PMID:19029303) RGD PMID:11051545 PMID:19029303 NCBI chr 8:98,282,358...98,315,412
Ensembl chr 8:89,402,866...89,435,515 		JBrowse link
G Ybx1 Y box binding protein 1 involved_in ISO (PMID:19029303) RGD PMID:19029303 NCBI chr 5:138,167,444...138,188,155
Ensembl chr 5:132,882,145...132,898,862 		JBrowse link
negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G A1cf APOBEC1 complementation factor involved_in ISO
IEA		 (PMID:12881431)
GO_REF:0000107		 RGD
Ensembl		 PMID:12881431 GO_REF:0000107 NCBI chr 1:239,149,436...239,242,460
Ensembl chr 1:229,736,106...229,824,354 		JBrowse link
G Apobec1 apolipoprotein B mRNA editing enzyme catalytic subunit 1 involved_in ISO
IEA		 (PMID:12881431)
GO_REF:0000107		 RGD
Ensembl		 PMID:12881431 GO_REF:0000107 NCBI chr 4:157,472,879...157,500,496
Ensembl chr 4:155,800,887...155,827,390 		JBrowse link
G Dhx34 DExH-box helicase 34 involved_in ISO
IEA		 (PMID:23828042)
GO_REF:0000107		 RGD
Ensembl		 PMID:23828042 GO_REF:0000107 NCBI chr 1:76,880,867...76,905,148
Ensembl chr 1:76,880,867...76,905,113 		JBrowse link
G Hnrnpab heterogeneous nuclear ribonucleoprotein A/B involved_in ISO
IEA		 (PMID:12881431)
GO_REF:0000107		 RGD
Ensembl		 PMID:12881431 GO_REF:0000107 NCBI chr10:36,358,004...36,363,898
Ensembl chr10:35,857,041...35,863,344 		JBrowse link
G Nbas NBAS subunit of NRZ tethering complex involved_in ISO
IEA		 (PMID:23828042)
GO_REF:0000107		 RGD
Ensembl		 PMID:23828042 GO_REF:0000107 NCBI chr 6:41,777,253...42,081,895
Ensembl chr 6:36,048,191...36,352,984 		JBrowse link
G Pabpc1 poly(A) binding protein, cytoplasmic 1 involved_in ISO
ISS		 (PMID:18447585)
GO_REF:0000024		 RGD
UniProt		 PMID:18447585 GO_REF:0000024 NCBI chr 7:69,662,513...69,674,806
Ensembl chr 7:67,777,381...67,789,744 		JBrowse link
G Secisbp2 SECIS binding protein 2 acts_upstream_of_or_within ISO
IEA		 MGI:4433050 (PMID:24274065)
GO_REF:0000107		 RGD
Ensembl		 PMID:24274065 GO_REF:0000107 NCBI chr17:13,538,513...13,569,573
Ensembl chr17:13,538,513...13,569,523 		JBrowse link
G Syncrip synaptotagmin binding, cytoplasmic RNA interacting protein involved_in ISO (PMID:12881431) RGD PMID:12881431 NCBI chr 8:98,282,358...98,315,412
Ensembl chr 8:89,402,866...89,435,515 		JBrowse link
G Upf3a UPF3A, regulator of nonsense mediated mRNA decay involved_in ISO
IEA		 MGI:107995|MGI:1915384 (PMID:27040500)
GO_REF:0000107		 RGD
Ensembl		 PMID:27040500 GO_REF:0000107 NCBI chr16:82,459,651...82,470,686
Ensembl chr16:75,757,441...75,769,345 		JBrowse link
negative regulation of nuclear-transcribed mRNA poly(A) tail shortening term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tent4a terminal nucleotidyltransferase 4A involved_in ISO
IEA		 (PMID:30026317)
GO_REF:0000107		 RGD
Ensembl		 PMID:30026317 GO_REF:0000107 NCBI chr 1:33,765,949...33,799,405
Ensembl chr 1:33,765,672...33,799,433 		JBrowse link
G Tent4b terminal nucleotidyltransferase 4B involved_in ISO (PMID:30026317) RGD PMID:30026317 NCBI chr19:18,807,616...18,868,969
Ensembl chr19:18,807,525...18,869,537 		JBrowse link
G Tob1 transducer of ErbB-2.1 involved_in ISO
ISS		 (PMID:18377426)
GO_REF:0000024		 RGD
UniProt		 PMID:18377426 GO_REF:0000024 NCBI chr10:79,659,993...79,662,031
Ensembl chr10:79,160,154...79,165,215 		JBrowse link
positive regulation of 3'-UTR-mediated mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arid5a AT-rich interaction domain 5A involved_in ISO (PMID:32209697) RGD PMID:32209697 NCBI chr 9:46,030,513...46,058,729
Ensembl chr 9:38,534,590...38,547,597 		JBrowse link
G Elavl4 ELAV like RNA binding protein 4 involved_in ISO
IEA
ISS		 (PMID:18218628)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:18218628 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:130,285,418...130,429,106
Ensembl chr 5:125,056,848...125,200,446 		JBrowse link
G Larp4b La ribonucleoprotein 4B involved_in ISO (PMID:26001795) RGD PMID:26001795 NCBI chr17:61,138,663...61,217,423
Ensembl chr17:61,138,709...61,187,960 		JBrowse link
G Qki QKI, KH domain containing RNA binding involved_in ISO (PMID:28188285) RGD PMID:28188285 NCBI chr 1:52,935,357...53,047,338
Ensembl chr 1:50,387,698...50,498,831 		JBrowse link
G Rbm24 RNA binding motif protein 24 involved_in ISO (PMID:24356969) RGD PMID:24356969 NCBI chr17:18,275,681...18,288,231
Ensembl chr17:18,275,688...18,288,102 		JBrowse link
G Tent4a terminal nucleotidyltransferase 4A involved_in ISO
IEA		 (PMID:30026317)
GO_REF:0000107		 RGD
Ensembl		 PMID:30026317 GO_REF:0000107 NCBI chr 1:33,765,949...33,799,405
Ensembl chr 1:33,765,672...33,799,433 		JBrowse link
G Tent4b terminal nucleotidyltransferase 4B involved_in ISO (PMID:30026317) RGD PMID:30026317 NCBI chr19:18,807,616...18,868,969
Ensembl chr19:18,807,525...18,869,537 		JBrowse link
RNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Igf2bp2 insulin-like growth factor 2 mRNA binding protein 2 involved_in ISO (PMID:36354136) RGD PMID:36354136 NCBI chr11:92,378,908...92,478,893
Ensembl chr11:78,874,414...78,974,377 		JBrowse link
G Naf1 nuclear assembly factor 1 ribonucleoprotein involved_in ISS
ISO		 GO_REF:0000024
(PMID:27510903)		 UniProt
RGD		 PMID:27510903 GO_REF:0000024 NCBI chr16:22,837,583...22,868,320
Ensembl chr16:22,837,588...22,868,293 		JBrowse link
G Phax phosphorylated adaptor for RNA export involved_in ISO
IEA		 (PMID:28297668)
GO_REF:0000107		 RGD
Ensembl		 PMID:28297668 GO_REF:0000107 NCBI chr18:50,053,133...50,069,823
Ensembl chr18:50,053,023...50,069,823 		JBrowse link
G Zcchc17 zinc finger CCHC-type containing 17 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:142,658,626...142,700,440
Ensembl chr 5:142,658,589...142,700,426 		JBrowse link
telomerase RNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhx36 DEAH-box helicase 36 involved_in ISO
IEA		 (PMID:22238380)
GO_REF:0000107		 RGD
Ensembl		 PMID:22238380 GO_REF:0000107 NCBI chr 2:149,006,089...149,044,192
Ensembl chr 2:146,856,469...146,894,572 		JBrowse link
G Dkc1 dyskerin pseudouridine synthase 1 involved_in ISO (PMID:25467444), (PMID:26950371) RGD PMID:25467444 PMID:26950371 NCBI chr  X:157,751,651...157,757,796 JBrowse link
G Naf1 nuclear assembly factor 1 ribonucleoprotein involved_in ISO (PMID:27510903) RGD PMID:27510903 NCBI chr16:22,837,583...22,868,320
Ensembl chr16:22,837,588...22,868,293 		JBrowse link
G Parn poly(A)-specific ribonuclease involved_in ISO
IEA		 (PMID:26482878), (PMID:26950371)
GO_REF:0000107		 RGD
Ensembl		 PMID:26482878 PMID:26950371 GO_REF:0000107 NCBI chr10:1,410,636...1,548,573
Ensembl chr10:1,410,642...1,548,560 		JBrowse link
tRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mettl1 methyltransferase 1, tRNA methylguanosine involved_in ISO
IEA		 (PMID:36599982), (PMID:36599985)
GO_REF:0000107		 RGD
Ensembl		 PMID:36599982 PMID:36599985 GO_REF:0000107 NCBI chr 7:64,750,189...64,754,531
Ensembl chr 7:62,864,853...62,869,202 		JBrowse link
G Nsun2 NOP2/Sun RNA methyltransferase 2 involved_in ISO
IEA		 (PMID:22885326)
GO_REF:0000107		 RGD
Ensembl		 PMID:22885326 GO_REF:0000107 NCBI chr 1:35,490,583...35,514,839
Ensembl chr 1:33,662,139...33,685,862 		JBrowse link
G Rnh1 ribonuclease/angiogenin inhibitor 1 involved_in ISO
IEA		 (PMID:23843625)
GO_REF:0000107		 RGD
Ensembl		 PMID:23843625 GO_REF:0000107 NCBI chr 1:196,269,293...196,281,763
Ensembl chr 1:196,269,293...196,281,910 		JBrowse link
G Slfn2 schlafen family member 2 involved_in ISO (PMID:33986151) RGD PMID:33986151 NCBI chr10:67,953,322...67,959,659
Ensembl chr10:67,953,171...67,959,458 		JBrowse link
G Trdmt1 tRNA aspartic acid methyltransferase 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:22885326)		 UniProt
RGD		 PMID:22885326 GO_REF:0000024 NCBI chr17:81,510,740...81,554,036
Ensembl chr17:76,610,543...76,645,439 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20558
    cellular process 19550
      metabolic process 12180
        negative regulation of metabolic process 3146
          negative regulation of catabolic process 380
            negative regulation of RNA catabolic process 95
              RNA stabilization + 83
              negative regulation of mRNA catabolic process + 81
              negative regulation of miRNA catabolic process 2
              negative regulation of mitochondrial RNA catabolic process + 2
              negative regulation of tRNA catabolic process + 5
Path 2
Term Annotations click to browse term
  biological_process 20558
    cellular process 19550
      metabolic process 12180
        primary metabolic process 10745
          nucleobase-containing compound metabolic process 5888
            nucleic acid metabolic process 5280
              RNA metabolic process 4693
                regulation of RNA metabolic process 3747
                  negative regulation of RNA metabolic process 1429
                    negative regulation of RNA catabolic process 95
                      RNA stabilization + 83
                      negative regulation of mRNA catabolic process + 81
                      negative regulation of miRNA catabolic process 2
                      negative regulation of mitochondrial RNA catabolic process + 2
                      negative regulation of tRNA catabolic process + 5
paths to the root