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ONTOLOGY REPORT - ANNOTATIONS

Term:annealing activity
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Accession:GO:0140666 term browser browse the term
Definition:An activity that facilitates the formation of a complementary double-stranded polynucleotide molecule.
Synonyms:related_synonym: renaturation
 alt_id: GO:0097617
 xref: Reactome:R-HSA-5686642 "RAD52 promotes single strand annealing at resected DNA DSBs"


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ATP-dependent DNA/DNA annealing activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RAD54L RAD54 like enables IDA (PMID:22705370) UniProt PMID:22705370 NCBI chr 1:46,247,688...46,278,473
Ensembl chr 1:46,246,461...46,278,480 		JBrowse link
G SMARCA1 SNF2 related chromatin remodeling ATPase 1 enables IDA (PMID:22705370) UniProt PMID:22705370 NCBI chr  X:129,446,506...129,523,490
Ensembl chr  X:129,446,501...129,523,500 		JBrowse link
G SMARCAL1 SNF2 related chromatin remodeling annealing helicase 1 enables IMP
IDA		 (PMID:18974355)
(PMID:22705370)		 UniProt PMID:18974355 PMID:22705370 NCBI chr 2:216,412,484...216,483,053
Ensembl chr 2:216,412,383...216,483,053 		JBrowse link
G TP53 tumor protein p53 enables IDA (PMID:8183576) UniProt PMID:8183576 NCBI chr17:7,668,421...7,687,490
Ensembl chr17:7,661,779...7,687,546 		JBrowse link
G ZRANB3 zinc finger RANBP2-type containing 3 enables IDA (PMID:21078962), (PMID:22704558), (PMID:22705370) UniProt PMID:21078962 PMID:22704558 PMID:22705370 NCBI chr 2:135,196,969...135,531,218
Ensembl chr 2:135,136,916...135,531,218 		JBrowse link
DNA/DNA annealing activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANXA1 annexin A1 ISO RGD PMID:20655937 RGD:7421590 NCBI chr 9:73,151,865...73,170,393
Ensembl chr 9:73,151,865...73,170,629 		JBrowse link
G BLM BLM RecQ like helicase enables IDA (PMID:17878217) GO_Central PMID:17878217 NCBI chr15:90,717,346...90,816,166
Ensembl chr15:90,717,346...90,816,166 		JBrowse link
G HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 ISO RGD PMID:1703006 RGD:10045979 NCBI chr12:54,280,726...54,287,087
Ensembl chr12:54,280,193...54,287,088 		JBrowse link
G RECQL RecQ like helicase enables IDA (PMID:19177149) GO_Central PMID:19177149 NCBI chr12:21,468,910...21,501,635
Ensembl chr12:21,468,910...21,501,669 		JBrowse link
G RECQL4 RecQ like helicase 4 enables IDA (PMID:19177149) GO_Central PMID:19177149 NCBI chr 8:144,511,288...144,517,833
Ensembl chr 8:144,511,288...144,517,845 		JBrowse link
RNA strand annealing activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DDX3X DEAD-box helicase 3 X-linked enables IDA (PMID:27546789) UniProt PMID:27546789 NCBI chr  X:41,333,308...41,364,472
Ensembl chr  X:41,333,348...41,364,472 		JBrowse link
G EIF4B eukaryotic translation initiation factor 4B enables IBA GO_Central GO_REF:0000033 NCBI chr12:53,006,456...53,042,215
Ensembl chr12:53,006,282...53,042,215 		JBrowse link
G EIF4H eukaryotic translation initiation factor 4H enables IBA GO_Central GO_REF:0000033 NCBI chr 7:74,174,356...74,197,096
Ensembl chr 7:74,174,231...74,197,122 		JBrowse link
G FMR1 fragile X messenger ribonucleoprotein 1 enables IDA (PMID:17057366) UniProt PMID:17057366 NCBI chr  X:147,911,919...147,951,125
Ensembl chr  X:147,911,919...147,951,125 		JBrowse link
G FXR1 FMR1 autosomal homolog 1 enables IDA (PMID:17057366) UniProt PMID:17057366 NCBI chr 3:180,912,670...180,982,753
Ensembl chr 3:180,868,141...180,982,753 		JBrowse link
G HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 ISO RGD PMID:1703006 RGD:10045979 NCBI chr12:54,280,726...54,287,087
Ensembl chr12:54,280,193...54,287,088 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 19683
    binding 18143
      nucleic acid binding 4752
        annealing activity 15
          DNA/DNA annealing activity + 10
          DNA/RNA hybrid annealing activity 0
          RNA strand annealing activity 6
paths to the root