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ONTOLOGY REPORT - ANNOTATIONS

Term:hydrocarbon catabolic process
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Accession:GO:0120253 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of a hydrocarbon, a compound consisting of carbon and hydrogen only.
Synonyms:exact_synonym: hydrocarbon breakdown;   hydrocarbon catabolism;   hydrocarbon degradation


show annotations for term's descendants           Sort by:
hydrocarbon catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ephx1 epoxide hydrolase 1 acts_upstream_of_or_within ISO
IEA		 MGI:2137236 (PMID:10446164)
GO_REF:0000107		 RGD
Ensembl		 PMID:10446164 GO_REF:0000107 NCBI chr13:95,246,079...95,275,852
Ensembl chr13:92,714,315...92,790,235 		JBrowse link
carotene catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bco1 beta-carotene oxygenase 1 involved_in ISO
IBA
IEA
ISS		 (PMID:11401432), (PMID:17951468), (PMID:24668807)
GO_REF:0000033
(PMID:11092891), (PMID:15951442)
GO_REF:0000107
GO_REF:0000024		 RGD
GO_Central
Ensembl
UniProt		 PMID:11092891 PMID:11401432 PMID:15951442 PMID:17951468 PMID:24668807 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr19:62,058,061...62,094,923
Ensembl chr19:45,149,265...45,186,101 		JBrowse link
G Bco2 beta-carotene oxygenase 2 involved_in ISO
IEA
IBA		 (PMID:21302131)
GO_REF:0000107
GO_REF:0000033
(PMID:11278918), (PMID:21106934)		 RGD
Ensembl
GO_Central		 PMID:11278918 PMID:21106934 PMID:21302131 GO_REF:0000033 GO_REF:0000107 NCBI chr 8:59,778,571...59,803,597
Ensembl chr 8:50,882,181...50,915,467 		JBrowse link
G Rps13 ribosomal protein S13 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:180,007,230...180,009,660
Ensembl chr 1:170,572,921...170,575,355
Ensembl chr 3:170,572,921...170,575,355 		JBrowse link
G Rps13l1 ribosomal protein S13 like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:61,253,046...61,253,614
Ensembl chr 5:56,457,124...56,457,669 		JBrowse link
naphthalene catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cyp2f4 cytochrome P450, family 2, subfamily f, polypeptide 4 involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:10383923)
(PMID:16876762)
GO_REF:0000107		 RGD
Ensembl		 PMID:10383923 PMID:16876762 GO_REF:0000107 NCBI chr 1:91,543,768...91,557,553
Ensembl chr 1:82,416,130...82,429,896 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20558
    cellular process 19550
      metabolic process 12180
        hydrocarbon metabolic process 10
          hydrocarbon catabolic process 6
            alkane catabolic process + 0
            alkene catabolic process + 0
            alkyne catabolic process + 0
            benzene catabolic process 0
            ethylbenzene catabolic process + 0
            fluorene catabolic process 0
            naphthalene catabolic process 1
            phenanthrene catabolic process + 0
            styrene catabolic process 0
            terpene catabolic process + 4
            toluene catabolic process + 0
            xylene catabolic process + 0
paths to the root