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ONTOLOGY REPORT - ANNOTATIONS

Term:rod photoreceptor outer segment
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Accession:GO:0120200 term browser browse the term
Definition:The outer segment of a vertebrate rod photoreceptor that contains sealed membrane discs that are not connected to the ciliary membrane and containing rhodopsin photoreceptor proteins.


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rod photoreceptor outer segment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp1a4 ATPase Na+/K+ transporting subunit alpha 4 located_in ISO
IEA 		(PMID:26373354)
GO_REF:0000107 		RGD
Ensembl		 PMID:26373354 GO_REF:0000107 NCBI chr13:87,216,139...87,252,155
Ensembl chr13:87,216,139...87,251,724 		JBrowse link
G Cep290 centrosomal protein 290 is_active_in ISO MGI:2144877 (PMID:29899041) RGD PMID:29899041 NCBI chr 7:37,196,765...37,285,955
Ensembl chr 7:37,196,783...37,285,955 		JBrowse link
G Cnga1 cyclic nucleotide gated channel subunit alpha 1 located_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:22802073) 		UniProt
Ensembl
RGD		 PMID:22802073 GO_REF:0000024 GO_REF:0000107 NCBI chr14:35,920,948...35,959,065
Ensembl chr14:35,926,854...35,959,056 		JBrowse link
G Cngb1 cyclic nucleotide gated channel subunit beta 1 located_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:22802073) 		UniProt
Ensembl
RGD		 PMID:22802073 GO_REF:0000024 GO_REF:0000107 NCBI chr19:9,732,646...9,798,864
Ensembl chr19:9,732,646...9,797,224 		JBrowse link
G Gucy2f guanylate cyclase 2F located_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:21078983) 		UniProt
Ensembl
RGD		 PMID:21078983 GO_REF:0000024 GO_REF:0000107 NCBI chr  X:110,507,183...110,605,017
Ensembl chr  X:110,507,183...110,605,017 		JBrowse link
G Rd3 RD3 regulator of GUCY2D located_in IEA
ISO 		GO_REF:0000107
(PMID:21078983) 		Ensembl
RGD		 PMID:21078983 GO_REF:0000107 NCBI chr13:106,060,657...106,097,063
Ensembl chr13:106,084,171...106,093,540 		JBrowse link
G Rgs9bp regulator of G protein signaling 9 binding protein located_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 1:97,386,326...97,387,039
Ensembl chr 1:97,386,326...97,387,039 		JBrowse link
G Rho rhodopsin located_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 4:150,653,205...150,658,367
Ensembl chr 4:150,653,205...150,658,367 		JBrowse link
G Spata7 spermatogenesis associated 7 is_active_in IBA
IEA
ISO 		GO_REF:0000033
GO_REF:0000107
MGI:2384917|MGI:5660490 (PMID:29899041) 		GO_Central
Ensembl
RGD		 PMID:29899041 GO_REF:0000033 GO_REF:0000107 NCBI chr 6:123,609,519...123,655,001
Ensembl chr 6:123,609,535...123,655,001 		JBrowse link
G Tmem237 transmembrane protein 237 located_in ISO (PMID:20375344) RGD PMID:20375344 NCBI chr 9:68,027,481...68,066,731
Ensembl chr 9:68,030,664...68,063,525 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 19485
    cellular anatomical structure 19353
      photoreceptor outer segment 94
        rod photoreceptor outer segment 10
          rod photoreceptor disc lumen 0
Path 2
Term Annotations click to browse term
  cellular_component 19485
    cellular anatomical structure 19353
      organelle 13686
        membrane-bounded organelle 12471
          cilium 1098
            non-motile cilium 188
              9+0 non-motile cilium 153
                photoreceptor cell cilium 126
                  photoreceptor outer segment 94
                    rod photoreceptor outer segment 10
                      rod photoreceptor disc lumen 0
paths to the root