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ONTOLOGY REPORT - ANNOTATIONS

Term:rod photoreceptor outer segment
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Accession:GO:0120200 term browser browse the term
Definition:The outer segment of a vertebrate rod photoreceptor that contains sealed membrane discs that are not connected to the ciliary membrane and containing rhodopsin photoreceptor proteins.


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rod photoreceptor outer segment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp1a4 ATPase Na+/K+ transporting subunit alpha 4 located_in ISO
IEA		 (PMID:26373354)
GO_REF:0000107		 RGD
Ensembl		 PMID:26373354 GO_REF:0000107 NCBI chr13:84,683,766...84,719,790
Ensembl chr13:84,683,768...84,719,687 		JBrowse link
G Cep290 centrosomal protein 290 is_active_in ISO MGI:2144877 (PMID:29899041) RGD PMID:29899041 NCBI chr 7:35,310,071...35,399,388
Ensembl chr 7:35,310,199...35,399,392 		JBrowse link
G Cnga1 cyclic nucleotide gated channel subunit alpha 1 located_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:22802073)		 UniProt
Ensembl
RGD		 PMID:22802073 GO_REF:0000024 GO_REF:0000107 NCBI chr14:35,566,947...35,605,065
Ensembl chr14:35,567,125...35,605,065 		JBrowse link
G Cngb1 cyclic nucleotide gated channel subunit beta 1 located_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr19:9,726,595...9,791,111
Ensembl chr19:9,726,595...9,791,173 		JBrowse link
G Gucy2f guanylate cyclase 2F located_in ISS
ISO		 GO_REF:0000024
(PMID:21078983)		 UniProt
RGD		 PMID:21078983 GO_REF:0000024 NCBI chr  X:105,710,356...105,808,183
Ensembl chr  X:105,710,356...105,808,183 		JBrowse link
G Rd3 RD3 regulator of GUCY2D located_in ISO (PMID:21078983) RGD PMID:21078983 NCBI chr13:103,551,823...103,562,925
Ensembl chr13:103,552,857...103,562,622 		JBrowse link
G Rgs9bp regulator of G protein signaling 9 binding protein located_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 1:88,249,438...88,250,151
Ensembl chr 1:88,249,438...88,250,151 		JBrowse link
G Rho rhodopsin located_in IEA
ISO		 GO_REF:0000107
(PMID:19332056), (PMID:21444805), (PMID:23178122)		 Ensembl
RGD		 PMID:19332056 PMID:21444805 PMID:23178122 GO_REF:0000107 NCBI chr 4:148,975,597...148,988,693
Ensembl chr 4:148,980,611...148,985,773 		JBrowse link
G Spata7 spermatogenesis associated 7 located_in
is_active_in		 IEA
IBA
ISO		 GO_REF:0000107
GO_REF:0000033
MGI:2384917|MGI:5660490 (PMID:29899041)		 Ensembl
GO_Central
RGD		 PMID:29899041 GO_REF:0000033 GO_REF:0000107 NCBI chr 6:117,879,828...117,925,284
Ensembl chr 6:117,879,823...117,925,284 		JBrowse link
G Tmem237 transmembrane protein 237 located_in ISO (PMID:20375344) RGD PMID:20375344 NCBI chr 9:60,533,348...60,569,253
Ensembl chr 9:60,535,233...60,572,567 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 20832
    cellular anatomical structure 20632
      photoreceptor outer segment 93
        rod photoreceptor outer segment 10
          rod photoreceptor disc lumen 0
Path 2
Term Annotations click to browse term
  cellular_component 20832
    cellular anatomical structure 20632
      organelle 13974
        membrane-bounded organelle 12560
          cilium 815
            non-motile cilium 181
              9+0 non-motile cilium 137
                photoreceptor cell cilium 123
                  photoreceptor outer segment 93
                    rod photoreceptor outer segment 10
                      rod photoreceptor disc lumen 0
paths to the root