ONTOLOGY REPORT - ANNOTATIONS
Term: Sm-like protein family complex
Accession: GO:0120114
browse the term
Definition: A protein complex containing members of the Like-Sm family of proteins, which includes both the Sm proteins and the Lsm proteins, and which generally form hexameric or heptameric ring structures which bind to RNA. While some of these ring complexes may form independently of RNA, many only form in association with their target RNA. In addition to Lsm-family proteins, many of these complexes contain additional protein members. Members of this family of complexes include the snRNPs which comprise the majority of the spliceosome. Others are involved in the 5' to 3' degradation pathways of mRNAs in the cytoplasm and of unspliced transcripts in the nucleus, as well as other diverse roles.
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Gemin7
gem (nuclear organelle) associated protein 7
part_of
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:79,215,054...79,228,769
Ensembl chr 1:79,214,919...79,224,994
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Gemin7l1
gem (nuclear organelle) associated protein 7-like 1
part_of
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 4:78,269,910...78,270,681
Ensembl chr 4:78,269,888...78,270,669
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LOC108350623
small nuclear ribonucleoprotein F-like
part_of
IEA
GO_REF:0000117
UniProt
GO_REF:0000117
NCBI chr 3:155,116,497...155,116,945
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LOC108352309
small nuclear ribonucleoprotein F-like
part_of
IEA
GO_REF:0000117
UniProt
GO_REF:0000117
NCBI chr11:33,533,614...33,533,927
Ensembl chr11:33,533,512...33,533,871
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Hexim1
HEXIM P-TEFb complex subunit 1
part_of
ISO
(PMID:18249148), (PMID:18483487), (PMID:28431135)
RGD
PMID:18249148 PMID:18483487 PMID:28431135
NCBI chr10:88,062,808...88,064,920
Ensembl chr10:88,062,803...88,066,189
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Larp7
La ribonucleoprotein 7, transcriptional regulator
part_of
ISO
(PMID:18249148), (PMID:18483487), (PMID:28431135)
RGD
PMID:18249148 PMID:18483487 PMID:28431135
NCBI chr 2:215,997,641...216,012,833
Ensembl chr 2:215,997,649...216,012,865
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Mepce
methylphosphate capping enzyme
part_of
ISO
(PMID:17643375), (PMID:28431135)
RGD
PMID:17643375 PMID:28431135
NCBI chr12:18,911,796...18,916,515
Ensembl chr12:18,911,796...18,916,514
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AC126899.1
part_of
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
Ensembl chr19:40,146,975...40,147,500
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Lsm1
LSM1 homolog, mRNA degradation associated
part_of
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr16:66,277,345...66,288,852
Ensembl chr16:66,277,345...66,288,852
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Lsm2
LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated
part_of
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:3,843,467...3,847,217
Ensembl chr20:3,843,466...3,847,266
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Lsm3
LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated
part_of
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 4:124,021,023...124,027,269
Ensembl chr 4:124,021,023...124,027,269
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Lsm5
LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated
part_of
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 4:85,951,073...85,954,289
Ensembl chr 6:104,652,477...104,654,165 Ensembl chr 4:104,652,477...104,654,165
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Lsm5l1
LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated like 1
part_of
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr16:1,339,769...1,340,198
Ensembl chr16:1,339,784...1,340,056
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Lsm7
LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated
part_of
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 7:8,856,698...8,859,113
Ensembl chr 7:8,856,489...8,859,119
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Lsm2
LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated
part_of
ISO
(PMID:10523320)
RGD
PMID:10523320
NCBI chr20:3,843,467...3,847,217
Ensembl chr20:3,843,466...3,847,266
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Lsm3
LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated
part_of
ISO
(PMID:10523320)
RGD
PMID:10523320
NCBI chr 4:124,021,023...124,027,269
Ensembl chr 4:124,021,023...124,027,269
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Lsm4
LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated
part_of
ISO
(PMID:10523320)
RGD
PMID:10523320
NCBI chr16:18,755,481...18,761,106
Ensembl chr16:18,755,484...18,760,926
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Lsm5
LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated
part_of
ISO
(PMID:10523320)
RGD
PMID:10523320
NCBI chr 4:85,951,073...85,954,289
Ensembl chr 6:104,652,477...104,654,165 Ensembl chr 4:104,652,477...104,654,165
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Lsm6
LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated
part_of
ISO
(PMID:10523320)
RGD
PMID:10523320
NCBI chr19:29,098,254...29,112,858
Ensembl chr13:42,114,032...42,116,484 Ensembl chr19:42,114,032...42,116,484
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Lsm7
LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated
part_of
ISO
(PMID:10523320)
RGD
PMID:10523320
NCBI chr 7:8,856,698...8,859,113
Ensembl chr 7:8,856,489...8,859,119
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Lsm8
LSM8 homolog, U6 small nuclear RNA associated
part_of
ISO
(PMID:10523320)
RGD
PMID:10523320
NCBI chr 4:47,306,259...47,312,125
Ensembl chr 4:47,306,295...47,314,293
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Clns1a
chloride nucleotide-sensitive channel 1A
part_of
ISO ISS IEA IBA
(PMID:18984161) GO_REF:0000024 GO_REF:0000002 GO_REF:0000033
RGD UniProt InterPro GO_Central
PMID:18984161
GO_REF:0000002 GO_REF:0000024 GO_REF:0000033
NCBI chr 1:152,019,369...152,039,670
Ensembl chr 1:152,019,378...152,039,661
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ENSRNOG00000068015
part_of
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
Ensembl chr X:133,878,251...133,878,959
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Snrpd1
small nuclear ribonucleoprotein D1 polypeptide
part_of
ISO IBA
(PMID:18984161) GO_REF:0000033
RGD GO_Central
PMID:18984161
GO_REF:0000033
NCBI chr18:1,696,838...1,707,400
Ensembl chr18:1,696,852...1,708,256
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Snrpd2
small nuclear ribonucleoprotein D2 polypeptide
part_of
ISO IBA
(PMID:18984161) GO_REF:0000033
RGD GO_Central
PMID:18984161
GO_REF:0000033
NCBI chr 1:78,798,377...78,801,227
Ensembl chr 1:78,798,377...78,803,351
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Snrpd3
small nuclear ribonucleoprotein D3 polypeptide
part_of
ISO IBA
(PMID:18984161) GO_REF:0000033
RGD GO_Central
PMID:18984161
GO_REF:0000033
NCBI chr20:13,130,112...13,145,947
Ensembl chr20:13,130,119...13,145,978
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Snrpe
small nuclear ribonucleoprotein polypeptide E
part_of
ISO IBA
(PMID:18984161) GO_REF:0000033
RGD GO_Central
PMID:18984161
GO_REF:0000033
NCBI chr13:45,050,986...45,057,231
Ensembl chr13:45,050,986...45,057,310 Ensembl chr 8:45,050,986...45,057,310
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Snrpepl2
small nuclear ribonucleoprotein polypeptide E like 2
part_of
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:133,709,656...133,710,137
Ensembl chr 1:133,709,797...133,710,075
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Snrpf
small nuclear ribonucleoprotein polypeptide F
part_of
ISO IBA
(PMID:18984161) GO_REF:0000033
RGD GO_Central
PMID:18984161
GO_REF:0000033
NCBI chr 7:28,130,427...28,137,129
Ensembl chr 7:28,130,427...28,137,129
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Zfp341
zinc finger protein 341
part_of
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 3:143,122,699...143,156,250
Ensembl chr 3:143,119,093...143,156,249
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Arfgef1
ADP ribosylation factor guanine nucleotide exchange factor 1
part_of
ISO IEA ISS
(PMID:18292223) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:18292223
GO_REF:0000024 GO_REF:0000107
NCBI chr 5:8,982,061...9,076,326
Ensembl chr 5:8,981,540...9,076,326
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ENSRNOG00000063288
part_of
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
Ensembl chr14:32,635,911...32,636,620
G
Prpf8
pre-mRNA processing factor 8
IDA
RGD
PMID:1707521
RGD:10045883
NCBI chr10:60,331,494...60,354,606
Ensembl chr10:60,331,494...60,354,606
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Sf3b1
splicing factor 3b, subunit 1
part_of
ISO
(PMID:20153721)
RGD
PMID:20153721
NCBI chr 9:56,492,403...56,532,300
Ensembl chr 9:56,492,403...56,532,300
G
Slu7
SLU7 homolog, splicing factor
part_of
ISS ISO
PMID:15181151 (PMID:15181151)
RGD
PMID:15181151 PMID:15181151
RGD:1304333
NCBI chr10:27,908,325...27,923,784
Ensembl chr10:27,908,396...27,923,349
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Snrpb2
small nuclear ribonucleoprotein polypeptide B2
IDA
RGD
PMID:1707521
RGD:10045883
NCBI chr 3:130,399,239...130,408,821
Ensembl chr 3:130,399,248...130,408,812
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Snrpf
small nuclear ribonucleoprotein polypeptide F
part_of
ISO
(PMID:11991638)
RGD
PMID:11991638
NCBI chr 7:28,130,427...28,137,129
Ensembl chr 7:28,130,427...28,137,129
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Ddx20
DEAD-box helicase 20
part_of
ISO IBA
(PMID:17178713), (PMID:18984161) GO_REF:0000033
RGD GO_Central
PMID:17178713 PMID:18984161
GO_REF:0000033
NCBI chr 2:193,158,761...193,168,484
Ensembl chr 2:193,158,823...193,166,774
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ENSRNOG00000063060
part_of
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
Ensembl chr 6:84,273,587...84,274,496
G
ENSRNOG00000068876
part_of
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
Ensembl chr 9:112,301,511...112,302,585
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Fmr1
fragile X messenger ribonucleoprotein 1
located_in
ISO
(PMID:18093976)
RGD
PMID:18093976
NCBI chr X:147,240,239...147,278,057
Ensembl chr X:147,240,301...147,278,050
G
Gemin2
gem (nuclear organelle) associated protein 2
part_of
ISS IBA ISO
GO_REF:0000024 GO_REF:0000033 (PMID:17178713), (PMID:18984161)
UniProt GO_Central RGD
PMID:17178713 PMID:18984161
GO_REF:0000024 GO_REF:0000033
NCBI chr 6:76,706,424...76,721,154
Ensembl chr 6:76,707,523...76,721,153
G
Gemin4
gem (nuclear organelle) associated protein 4
part_of
ISO IBA
(PMID:17178713), (PMID:18984161) GO_REF:0000033
RGD GO_Central
PMID:17178713 PMID:18984161
GO_REF:0000033
NCBI chr10:61,062,420...61,073,529
Ensembl chr10:61,066,425...61,073,431 Ensembl chr10:61,066,425...61,073,431
G
Gemin5
gem (nuclear organelle) associated protein 5
part_of
ISO IBA
(PMID:17178713), (PMID:18984161), (PMID:20513430) GO_REF:0000033
RGD GO_Central
PMID:17178713 PMID:18984161 PMID:20513430
GO_REF:0000033
NCBI chr10:42,295,729...42,342,902
Ensembl chr10:42,297,515...42,342,892
G
Gemin6
gem (nuclear organelle) associated protein 6
part_of
ISO IBA
(PMID:17178713), (PMID:18984161) GO_REF:0000033
RGD GO_Central
PMID:17178713 PMID:18984161
GO_REF:0000033
NCBI chr 6:14,786,090...14,790,617
Ensembl chr 6:14,786,070...14,790,612
G
Gemin7
gem (nuclear organelle) associated protein 7
part_of
ISO
(PMID:17178713), (PMID:18984161)
RGD
PMID:17178713 PMID:18984161
NCBI chr 1:79,215,054...79,228,769
Ensembl chr 1:79,214,919...79,224,994
G
Gemin8
gem (nuclear organelle) associated protein 8
part_of
ISO IBA
(PMID:16434402), (PMID:17178713), (PMID:18984161) GO_REF:0000033
RGD GO_Central
PMID:16434402 PMID:17178713 PMID:18984161
GO_REF:0000033
NCBI chr X:28,259,806...28,278,641
Ensembl chr X:28,259,793...28,278,663
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Glod4
glyoxalase domain containing 4
part_of
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr10:61,077,535...61,095,876
Ensembl chr10:61,066,421...61,095,898
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Smn1
survival of motor neuron 1, telomeric
part_of
ISS IBA ISO
GO_REF:0000024 GO_REF:0000033 (PMID:11283611), (PMID:17178713), (PMID:18093976), (PMID:18984161)
UniProt GO_Central RGD
PMID:11283611 PMID:17178713 PMID:18093976 PMID:18984161
GO_REF:0000024 GO_REF:0000033
NCBI chr 2:31,490,018...31,501,065
Ensembl chr 2:31,490,015...31,501,060
G
Strap
serine/threonine kinase receptor associated protein
part_of
ISS IBA ISO
GO_REF:0000024 GO_REF:0000033 (PMID:17178713), (PMID:18984161)
UniProt GO_Central RGD
PMID:17178713 PMID:18984161
GO_REF:0000024 GO_REF:0000033
NCBI chr 4:170,646,042...170,660,291
Ensembl chr 4:170,646,001...170,660,828
G
Gemin5
gem (nuclear organelle) associated protein 5
part_of
ISO
(PMID:19377484)
RGD
PMID:19377484
NCBI chr10:42,295,729...42,342,902
Ensembl chr10:42,297,515...42,342,892
G
AABR07042226.1
part_of
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
Ensembl chr X:144,806,986...144,812,552
G
Ddx20
DEAD-box helicase 20
part_of
ISO
(PMID:18984161)
RGD
PMID:18984161
NCBI chr 2:193,158,761...193,168,484
Ensembl chr 2:193,158,823...193,166,774
G
Gemin2
gem (nuclear organelle) associated protein 2
part_of
ISS ISO
GO_REF:0000024 (PMID:18984161)
UniProt RGD
PMID:18984161
GO_REF:0000024
NCBI chr 6:76,706,424...76,721,154
Ensembl chr 6:76,707,523...76,721,153
G
Gemin4
gem (nuclear organelle) associated protein 4
part_of
ISO
(PMID:18984161)
RGD
PMID:18984161
NCBI chr10:61,062,420...61,073,529
Ensembl chr10:61,066,425...61,073,431 Ensembl chr10:61,066,425...61,073,431
G
Gemin5
gem (nuclear organelle) associated protein 5
part_of
ISO
(PMID:18984161)
RGD
PMID:18984161
NCBI chr10:42,295,729...42,342,902
Ensembl chr10:42,297,515...42,342,892
G
Gemin6
gem (nuclear organelle) associated protein 6
part_of
ISO
(PMID:18984161)
RGD
PMID:18984161
NCBI chr 6:14,786,090...14,790,617
Ensembl chr 6:14,786,070...14,790,612
G
Gemin7
gem (nuclear organelle) associated protein 7
part_of
ISO
(PMID:18984161)
RGD
PMID:18984161
NCBI chr 1:79,215,054...79,228,769
Ensembl chr 1:79,214,919...79,224,994
G
Gemin7l1
gem (nuclear organelle) associated protein 7-like 1
part_of
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr 4:78,269,910...78,270,681
Ensembl chr 4:78,269,888...78,270,669
G
Gemin8
gem (nuclear organelle) associated protein 8
part_of
ISO
(PMID:18984161)
RGD
PMID:18984161
NCBI chr X:28,259,806...28,278,641
Ensembl chr X:28,259,793...28,278,663
G
Smn1
survival of motor neuron 1, telomeric
part_of
ISS ISO
GO_REF:0000024 (PMID:18984161)
UniProt RGD
PMID:18984161
GO_REF:0000024
NCBI chr 2:31,490,018...31,501,065
Ensembl chr 2:31,490,015...31,501,060
G
Snrpb
small nuclear ribonucleoprotein polypeptides B and B1
part_of
ISS ISO
GO_REF:0000024 (PMID:18984161)
UniProt RGD
PMID:18984161
GO_REF:0000024
NCBI chr 3:117,369,816...117,379,344
Ensembl chr 3:117,370,100...117,379,339
G
Snrpd1
small nuclear ribonucleoprotein D1 polypeptide
part_of
ISO IBA
(PMID:18984161) GO_REF:0000033
RGD GO_Central
PMID:18984161
GO_REF:0000033
NCBI chr18:1,696,838...1,707,400
Ensembl chr18:1,696,852...1,708,256
G
Snrpd2
small nuclear ribonucleoprotein D2 polypeptide
part_of
ISO
(PMID:18984161)
RGD
PMID:18984161
NCBI chr 1:78,798,377...78,801,227
Ensembl chr 1:78,798,377...78,803,351
G
Snrpd3
small nuclear ribonucleoprotein D3 polypeptide
part_of
ISO IBA
(PMID:18984161) GO_REF:0000033
RGD GO_Central
PMID:18984161
GO_REF:0000033
NCBI chr20:13,130,112...13,145,947
Ensembl chr20:13,130,119...13,145,978
G
Snrpe
small nuclear ribonucleoprotein polypeptide E
part_of
ISO
(PMID:18984161)
RGD
PMID:18984161
NCBI chr13:45,050,986...45,057,231
Ensembl chr13:45,050,986...45,057,310 Ensembl chr 8:45,050,986...45,057,310
G
Snrpf
small nuclear ribonucleoprotein polypeptide F
part_of
ISO
(PMID:18984161)
RGD
PMID:18984161
NCBI chr 7:28,130,427...28,137,129
Ensembl chr 7:28,130,427...28,137,129
G
Snrpg
small nuclear ribonucleoprotein polypeptide G
part_of
ISO IBA
(PMID:18984161) GO_REF:0000033
RGD GO_Central
PMID:18984161
GO_REF:0000033
NCBI chr 4:118,812,278...118,819,827
Ensembl chr 4:118,812,252...118,819,826
G
Snrpgl1
small nuclear ribonucleoprotein polypeptide G like 1
part_of
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:87,982,629...87,983,056
Ensembl chr 1:87,982,626...87,983,118 Ensembl chr 4:87,982,626...87,983,118
G
Strap
serine/threonine kinase receptor associated protein
part_of
ISO ISS
(PMID:18984161) GO_REF:0000024
RGD UniProt
PMID:18984161
GO_REF:0000024
NCBI chr 4:170,646,042...170,660,291
Ensembl chr 4:170,646,001...170,660,828
G
Prpf4
pre-mRNA splicing tri-snRNP complex factor 4
part_of
ISO
(PMID:25383878)
RGD
PMID:25383878
NCBI chr 5:75,859,934...75,873,924
Ensembl chr 5:75,859,924...75,873,919
G
AABR07042226.1
part_of
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
Ensembl chr X:144,806,986...144,812,552
G
Lsm4
LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated
part_of
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr16:18,755,481...18,761,106
Ensembl chr16:18,755,484...18,760,926
G
Lsm7
LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated
part_of
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 7:8,856,698...8,859,113
Ensembl chr 7:8,856,489...8,859,119
G
Prpf31
pre-mRNA processing factor 31
part_of
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:65,575,887...65,587,561
Ensembl chr 1:65,575,887...65,587,873
G
Snrpd1
small nuclear ribonucleoprotein D1 polypeptide
part_of
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr18:1,696,838...1,707,400
Ensembl chr18:1,696,852...1,708,256
G
Snrpd3
small nuclear ribonucleoprotein D3 polypeptide
part_of
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:13,130,112...13,145,947
Ensembl chr20:13,130,119...13,145,978
G
Snrpg
small nuclear ribonucleoprotein polypeptide G
part_of
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 4:118,812,278...118,819,827
Ensembl chr 4:118,812,252...118,819,826
G
Snrpgl1
small nuclear ribonucleoprotein polypeptide G like 1
part_of
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:87,982,629...87,983,056
Ensembl chr 1:87,982,626...87,983,118 Ensembl chr 4:87,982,626...87,983,118
G
AABR07042226.1
part_of
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
Ensembl chr X:144,806,986...144,812,552
G
ENSRNOG00000064062
part_of
IEA
GO_REF:0000104
UniProt
GO_REF:0000104
Ensembl chr19:33,454,456...33,455,388
G
ENSRNOG00000066758
part_of
IEA
GO_REF:0000104
UniProt
GO_REF:0000104
Ensembl chr X:14,995,412...14,996,454
G
LOC120099250
U1 small nuclear ribonucleoprotein C-like
part_of
IEA
GO_REF:0000104
UniProt
GO_REF:0000104
NCBI chr X:135,673,708...135,678,865
G
Luc7l
LUC7-like
part_of
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr10:15,273,340...15,307,131
Ensembl chr10:15,273,348...15,303,112
G
Luc7l2
LUC7-like 2 pre-mRNA splicing factor
part_of
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 4:67,287,593...67,347,986
Ensembl chr 4:67,287,640...67,347,964
G
Luc7l3
LUC7-like 3 pre-mRNA splicing factor
part_of
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr10:79,240,050...79,276,555
Ensembl chr10:79,240,563...79,276,538
G
Luc7l3-ps2
LUC7-like 3 pre-mRNA splicing factor, pseudogene 2
part_of
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 5:49,653,487...49,655,419
G
Prpf39
pre-mRNA processing factor 39
part_of
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 6:83,088,981...83,113,826
Ensembl chr 6:83,088,986...83,113,825
G
Prpf40a
pre-mRNA processing factor 40 homolog A
part_of
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 3:37,625,585...37,689,859
Ensembl chr 3:37,627,690...37,690,886
G
Prpf40b
pre-mRNA processing factor 40 homolog B
part_of
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 7:130,392,611...130,454,053
Ensembl chr 7:130,432,112...130,454,052
G
Snrnp70
small nuclear ribonucleoprotein U1 subunit 70
part_of
IDA ISO IBA
(PMID:21113136), (PMID:23793891), (PMID:25555158), (PMID:33677607) GO_REF:0000033
RGD GO_Central
PMID:21113136 PMID:23793891 PMID:25555158 PMID:33677607 PMID:16502463
GO_REF:0000033, RGD:10448962
NCBI chr 1:95,856,038...95,876,434
Ensembl chr 1:95,856,036...95,876,392
G
Snrpa
small nuclear ribonucleoprotein polypeptide A
part_of
IDA ISO IBA
(PMID:21113136), (PMID:23793891), (PMID:33677607) GO_REF:0000033 (PMID:25555158)
RGD GO_Central
PMID:21113136 PMID:23793891 PMID:25555158 PMID:33677607 PMID:16502463
GO_REF:0000033, RGD:10448962
NCBI chr 1:82,481,770...82,490,540
Ensembl chr 1:82,481,770...82,490,538
G
Snrpb
small nuclear ribonucleoprotein polypeptides B and B1
part_of
IDA ISO IBA ISS
(PMID:21113136), (PMID:25555158), (PMID:33677607) GO_REF:0000033 GO_REF:0000024
RGD GO_Central UniProt
PMID:21113136 PMID:25555158 PMID:33677607 PMID:8371979
GO_REF:0000024 GO_REF:0000033, RGD:1601359
NCBI chr 3:117,369,816...117,379,344
Ensembl chr 3:117,370,100...117,379,339
G
Snrpb2
small nuclear ribonucleoprotein polypeptide B2
part_of
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 3:130,399,239...130,408,821
Ensembl chr 3:130,399,248...130,408,812
G
Snrpc
small nuclear ribonucleoprotein polypeptide C
part_of
IDA ISO IBA IEA ISS
(PMID:15312772), (PMID:15525645), (PMID:21113136), (PMID:33677607) GO_REF:0000033 GO_REF:0000104 GO_REF:0000024
RGD GO_Central UniProt
PMID:15312772 PMID:15525645 PMID:21113136 PMID:33677607 PMID:16502463
GO_REF:0000024 GO_REF:0000033 GO_REF:0000104, RGD:10448962
NCBI chr20:5,888,453...5,906,638
Ensembl chr20:5,888,453...5,906,638
G
Snrpd1
small nuclear ribonucleoprotein D1 polypeptide
part_of
IDA ISO IBA
(PMID:21113136), (PMID:25555158), (PMID:33677607) GO_REF:0000033
RGD GO_Central
PMID:21113136 PMID:25555158 PMID:33677607 PMID:16502463
GO_REF:0000033, RGD:10448962
NCBI chr18:1,696,838...1,707,400
Ensembl chr18:1,696,852...1,708,256
G
Snrpd2
small nuclear ribonucleoprotein D2 polypeptide
part_of
IDA ISO IBA
(PMID:21113136), (PMID:25555158), (PMID:33677607) GO_REF:0000033
RGD GO_Central
PMID:21113136 PMID:25555158 PMID:33677607 PMID:16502463
GO_REF:0000033, RGD:10448962
NCBI chr 1:78,798,377...78,801,227
Ensembl chr 1:78,798,377...78,803,351
G
Snrpd3
small nuclear ribonucleoprotein D3 polypeptide
part_of
IDA ISO IBA
(PMID:21113136), (PMID:25555158), (PMID:33677607) GO_REF:0000033
RGD GO_Central
PMID:21113136 PMID:25555158 PMID:33677607 PMID:16502463
GO_REF:0000033, RGD:10448962
NCBI chr20:13,130,112...13,145,947
Ensembl chr20:13,130,119...13,145,978
G
Snrpe
small nuclear ribonucleoprotein polypeptide E
part_of
IDA ISO IBA
(PMID:21113136), (PMID:25555158), (PMID:33677607) GO_REF:0000033
RGD GO_Central
PMID:21113136 PMID:25555158 PMID:33677607 PMID:16502463
GO_REF:0000033, RGD:10448962
NCBI chr13:45,050,986...45,057,231
Ensembl chr13:45,050,986...45,057,310 Ensembl chr 8:45,050,986...45,057,310
G
Snrpepl2
small nuclear ribonucleoprotein polypeptide E like 2
part_of
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:133,709,656...133,710,137
Ensembl chr 1:133,709,797...133,710,075
G
Snrpf
small nuclear ribonucleoprotein polypeptide F
part_of
IBA ISO
GO_REF:0000033 (PMID:21113136), (PMID:25555158), (PMID:33677607)
GO_Central RGD
PMID:21113136 PMID:25555158 PMID:33677607
GO_REF:0000033
NCBI chr 7:28,130,427...28,137,129
Ensembl chr 7:28,130,427...28,137,129
G
Snrpg
small nuclear ribonucleoprotein polypeptide G
part_of
IDA ISO IBA
(PMID:21113136), (PMID:25555158), (PMID:33677607) GO_REF:0000033
RGD GO_Central
PMID:21113136 PMID:25555158 PMID:33677607 PMID:16502463
GO_REF:0000033, RGD:10448962
NCBI chr 4:118,812,278...118,819,827
Ensembl chr 4:118,812,252...118,819,826
G
Snrpgl1
small nuclear ribonucleoprotein polypeptide G like 1
part_of
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:87,982,629...87,983,056
Ensembl chr 1:87,982,626...87,983,118 Ensembl chr 4:87,982,626...87,983,118
G
Snrpn
small nuclear ribonucleoprotein polypeptide N
part_of
IDA IBA
GO_REF:0000033
GO_Central RGD
PMID:8371979
GO_REF:0000033, RGD:1601359
NCBI chr 1:111,101,327...111,123,400
Ensembl chr 1:111,101,329...111,123,634
G
Zfp341
zinc finger protein 341
part_of
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 3:143,122,699...143,156,250
Ensembl chr 3:143,119,093...143,156,249
G
Sf3b1
splicing factor 3b, subunit 1
part_of
ISO
(PMID:11252167)
RGD
PMID:11252167
NCBI chr 9:56,492,403...56,532,300
Ensembl chr 9:56,492,403...56,532,300
G
AABR07042226.1
part_of
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
Ensembl chr X:144,806,986...144,812,552
G
ENSRNOG00000064062
part_of
IEA
GO_REF:0000104
UniProt
GO_REF:0000104
Ensembl chr19:33,454,456...33,455,388
G
Htatsf1
HIV-1 Tat specific factor 1
part_of
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr X:134,935,426...134,949,607
Ensembl chr X:134,935,426...134,949,607
G
Phf5a
PHD finger protein 5A
part_of
ISS IBA ISO
GO_REF:0000024 GO_REF:0000033 (PMID:12234937)
UniProt GO_Central RGD
PMID:12234937
GO_REF:0000024 GO_REF:0000033
NCBI chr 7:113,378,469...113,385,035
Ensembl chr 7:113,378,471...113,385,460
G
Rbmx2
RNA binding motif protein, X-linked 2
part_of
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr X:127,888,514...127,896,239
Ensembl chr X:127,888,438...127,896,869
G
Sf3a1
splicing factor 3A subunit 1
part_of
ISO IBA
(PMID:10882114), (PMID:11533230), (PMID:23793891) GO_REF:0000033
RGD GO_Central
PMID:10882114 PMID:11533230 PMID:23793891
GO_REF:0000033
NCBI chr14:79,031,394...79,052,144
Ensembl chr14:79,031,394...79,052,144
G
Sf3a2
splicing factor 3A subunit 2
part_of
ISO IBA ISS
(PMID:11533230) GO_REF:0000033 GO_REF:0000024
RGD GO_Central UniProt
PMID:11533230
GO_REF:0000024 GO_REF:0000033
NCBI chr 7:8,909,507...8,916,104
Ensembl chr 7:8,909,507...8,915,530
G
Sf3a3
splicing factor 3a, subunit 3
part_of
ISO
(PMID:11533230)
RGD
PMID:11533230
NCBI chr 5:136,967,713...136,987,345
Ensembl chr 5:136,967,691...136,987,361
G
Sf3b1
splicing factor 3b, subunit 1
part_of
ISO IBA
(PMID:11252167) GO_REF:0000033
RGD GO_Central
PMID:11252167
GO_REF:0000033
NCBI chr 9:56,492,403...56,532,300
Ensembl chr 9:56,492,403...56,532,300
G
Sf3b2
splicing factor 3b, subunit 2
part_of
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:202,570,423...202,590,774
Ensembl chr 1:202,570,423...202,590,759
G
Sf3b3
splicing factor 3b, subunit 3
part_of
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr19:38,782,749...38,820,271
Ensembl chr19:38,783,040...38,820,245
G
Sf3b4
splicing factor 3B subunit 4
part_of
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 2:183,732,791...183,737,545
Ensembl chr 2:183,732,754...183,737,959
G
Sf3b5
splicing factor 3b, subunit 5
part_of
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:7,357,040...7,357,752
Ensembl chr 1:7,350,731...7,357,839
G
Sf3b6
splicing factor 3B, subunit 6
part_of
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 6:27,826,044...27,835,086
Ensembl chr 6:27,826,029...27,835,156
G
Snrpa1
small nuclear ribonucleoprotein polypeptide A'
part_of
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:119,641,402...119,654,653
Ensembl chr 1:119,638,481...119,654,653
G
Snrpb
small nuclear ribonucleoprotein polypeptides B and B1
part_of
IDA IBA
GO_REF:0000033
GO_Central RGD
PMID:8371979
GO_REF:0000033, RGD:1601359
NCBI chr 3:117,369,816...117,379,344
Ensembl chr 3:117,370,100...117,379,339
G
Snrpb2
small nuclear ribonucleoprotein polypeptide B2
part_of
ISO
(PMID:2951739)
RGD
PMID:2951739
NCBI chr 3:130,399,239...130,408,821
Ensembl chr 3:130,399,248...130,408,812
G
Snrpd1
small nuclear ribonucleoprotein D1 polypeptide
part_of
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr18:1,696,838...1,707,400
Ensembl chr18:1,696,852...1,708,256
G
Snrpd2
small nuclear ribonucleoprotein D2 polypeptide
part_of
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:78,798,377...78,801,227
Ensembl chr 1:78,798,377...78,803,351
G
Snrpd3
small nuclear ribonucleoprotein D3 polypeptide
part_of
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:13,130,112...13,145,947
Ensembl chr20:13,130,119...13,145,978
G
Snrpe
small nuclear ribonucleoprotein polypeptide E
part_of
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr13:45,050,986...45,057,231
Ensembl chr13:45,050,986...45,057,310 Ensembl chr 8:45,050,986...45,057,310
G
Snrpepl2
small nuclear ribonucleoprotein polypeptide E like 2
part_of
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:133,709,656...133,710,137
Ensembl chr 1:133,709,797...133,710,075
G
Snrpg
small nuclear ribonucleoprotein polypeptide G
part_of
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 4:118,812,278...118,819,827
Ensembl chr 4:118,812,252...118,819,826
G
Snrpgl1
small nuclear ribonucleoprotein polypeptide G like 1
part_of
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:87,982,629...87,983,056
Ensembl chr 1:87,982,626...87,983,118 Ensembl chr 4:87,982,626...87,983,118
G
Snrpn
small nuclear ribonucleoprotein polypeptide N
part_of
IDA IBA
GO_REF:0000033
GO_Central RGD
PMID:8371979
GO_REF:0000033, RGD:1601359
NCBI chr 1:111,101,327...111,123,400
Ensembl chr 1:111,101,329...111,123,634
G
U2surp
U2 snRNP-associated SURP domain containing
part_of
IEA
GO_REF:0000107
Ensembl
GO_REF:0000107
NCBI chr 8:96,018,932...96,075,795
Ensembl chr 8:96,022,957...96,075,691
G
Zfp341
zinc finger protein 341
part_of
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 3:143,122,699...143,156,250
Ensembl chr 3:143,119,093...143,156,249
G
AABR07042226.1
part_of
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
Ensembl chr X:144,806,986...144,812,552
G
Ddx39b
DExD-box helicase 39B
part_of
ISO IEA
(PMID:18593880) GO_REF:0000107
RGD Ensembl
PMID:18593880
GO_REF:0000107
NCBI chr20:3,547,702...3,585,064
Ensembl chr20:3,572,056...3,584,996
G
ENSRNOG00000064062
part_of
IEA
GO_REF:0000104
UniProt
GO_REF:0000104
Ensembl chr19:33,454,456...33,455,388
G
Prpf31
pre-mRNA processing factor 31
part_of
ISO IBA
(PMID:17412961) GO_REF:0000033
RGD GO_Central
PMID:17412961
GO_REF:0000033
NCBI chr 1:65,575,887...65,587,561
Ensembl chr 1:65,575,887...65,587,873
G
Snrpb
small nuclear ribonucleoprotein polypeptides B and B1
part_of
ISS IBA ISO
GO_REF:0000024 GO_REF:0000033 (PMID:21516107)
UniProt GO_Central RGD
PMID:21516107
GO_REF:0000024 GO_REF:0000033
NCBI chr 3:117,369,816...117,379,344
Ensembl chr 3:117,370,100...117,379,339
G
Snrpd1
small nuclear ribonucleoprotein D1 polypeptide
part_of
ISO IBA
(PMID:21516107) GO_REF:0000033
RGD GO_Central
PMID:21516107
GO_REF:0000033
NCBI chr18:1,696,838...1,707,400
Ensembl chr18:1,696,852...1,708,256
G
Snrpd2
small nuclear ribonucleoprotein D2 polypeptide
part_of
ISO
(PMID:21516107)
RGD
PMID:21516107
NCBI chr 1:78,798,377...78,801,227
Ensembl chr 1:78,798,377...78,803,351
G
Snrpd3
small nuclear ribonucleoprotein D3 polypeptide
part_of
ISO IBA
(PMID:21516107) GO_REF:0000033
RGD GO_Central
PMID:21516107
GO_REF:0000033
NCBI chr20:13,130,112...13,145,947
Ensembl chr20:13,130,119...13,145,978
G
Snrpe
small nuclear ribonucleoprotein polypeptide E
part_of
ISO IBA
(PMID:21516107) GO_REF:0000033
RGD GO_Central
PMID:21516107
GO_REF:0000033
NCBI chr13:45,050,986...45,057,231
Ensembl chr13:45,050,986...45,057,310 Ensembl chr 8:45,050,986...45,057,310
G
Snrpepl2
small nuclear ribonucleoprotein polypeptide E like 2
part_of
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:133,709,656...133,710,137
Ensembl chr 1:133,709,797...133,710,075
G
Snrpf
small nuclear ribonucleoprotein polypeptide F
part_of
ISO
(PMID:21516107)
RGD
PMID:21516107
NCBI chr 7:28,130,427...28,137,129
Ensembl chr 7:28,130,427...28,137,129
G
Snrpg
small nuclear ribonucleoprotein polypeptide G
part_of
ISO IBA
(PMID:21516107) GO_REF:0000033
RGD GO_Central
PMID:21516107
GO_REF:0000033
NCBI chr 4:118,812,278...118,819,827
Ensembl chr 4:118,812,252...118,819,826
G
Snrpgl1
small nuclear ribonucleoprotein polypeptide G like 1
part_of
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:87,982,629...87,983,056
Ensembl chr 1:87,982,626...87,983,118 Ensembl chr 4:87,982,626...87,983,118
G
Snrpn
small nuclear ribonucleoprotein polypeptide N
part_of
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:111,101,327...111,123,400
Ensembl chr 1:111,101,329...111,123,634
G
Zfp341
zinc finger protein 341
part_of
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 3:143,122,699...143,156,250
Ensembl chr 3:143,119,093...143,156,249
G
Ppih
peptidylprolyl isomerase H
part_of
ISO
(PMID:9570313)
RGD
PMID:9570313
NCBI chr 5:132,906,324...132,924,341
Ensembl chr 5:132,906,328...132,924,267
G
Prpf4
pre-mRNA splicing tri-snRNP complex factor 4
part_of
ISO
(PMID:25383878), (PMID:9570313)
RGD
PMID:9570313 PMID:25383878
NCBI chr 5:75,859,934...75,873,924
Ensembl chr 5:75,859,924...75,873,919
G
Sart3
spliceosome associated factor 3, U4/U6 recycling protein
located_in
ISO
(PMID:12032085)
RGD
PMID:12032085
NCBI chr12:42,859,026...42,887,041
Ensembl chr12:42,859,305...42,887,038
G
AC126899.1
part_of
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
Ensembl chr19:40,146,975...40,147,500
G
Cd2bp2
Cd2 (cytoplasmic tail) binding protein 2
NOT|part_of
ISO
(PMID:15840814)
RGD
PMID:15840814
NCBI chr 1:181,809,399...181,815,269
Ensembl chr 1:181,809,406...181,813,448
G
Ddx23
DEAD-box helicase 23
part_of
ISO
(PMID:30975767), (PMID:9409622)
RGD
PMID:9409622 PMID:30975767
NCBI chr 7:129,797,620...129,814,909
Ensembl chr 7:129,797,614...129,814,949
G
Eftud2
elongation factor Tu GTP binding domain containing 2
part_of
IBA ISO
GO_REF:0000033 (PMID:23793891), (PMID:30975767)
GO_Central RGD
PMID:23793891 PMID:30975767
GO_REF:0000033
NCBI chr10:87,804,893...87,852,181
Ensembl chr10:87,804,892...87,846,079
G
ENSRNOG00000064062
part_of
IEA
GO_REF:0000104
UniProt
GO_REF:0000104
Ensembl chr19:33,454,456...33,455,388
G
ENSRNOG00000069332
part_of
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
Ensembl chr 2:89,339,501...89,339,701
G
Hars2
histidyl-tRNA synthetase 2, mitochondrial
part_of
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr18:28,398,790...28,408,075
Ensembl chr18:28,398,795...28,414,747
G
Linc00176
long intergenic non-protein coding RNA 176
part_of
IEA
GO_REF:0000107
Ensembl
GO_REF:0000107
NCBI chr 3:168,771,350...168,775,133
Ensembl chr 3:168,704,299...168,774,991
G
Lsm2
LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated
part_of
IBA ISO
GO_REF:0000033 (PMID:10523320), (PMID:26912367), (PMID:30975767)
GO_Central RGD
PMID:10523320 PMID:26912367 PMID:30975767
GO_REF:0000033
NCBI chr20:3,843,467...3,847,217
Ensembl chr20:3,843,466...3,847,266
G
Lsm3
LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated
part_of
IBA ISO
GO_REF:0000033 (PMID:10369684), (PMID:10523320), (PMID:26912367), (PMID:30975767)
GO_Central RGD
PMID:10369684 PMID:10523320 PMID:26912367 PMID:30975767
GO_REF:0000033
NCBI chr 4:124,021,023...124,027,269
Ensembl chr 4:124,021,023...124,027,269
G
Lsm4
LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated
part_of
ISO
(PMID:26912367), (PMID:30975767)
RGD
PMID:26912367 PMID:30975767
NCBI chr16:18,755,481...18,761,106
Ensembl chr16:18,755,484...18,760,926
G
Lsm5
LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated
part_of
IBA ISO
GO_REF:0000033 (PMID:26912367), (PMID:30975767)
GO_Central RGD
PMID:26912367 PMID:30975767
GO_REF:0000033
NCBI chr 4:85,951,073...85,954,289
Ensembl chr 6:104,652,477...104,654,165 Ensembl chr 4:104,652,477...104,654,165
G
Lsm5l1
LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated like 1
part_of
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr16:1,339,769...1,340,198
Ensembl chr16:1,339,784...1,340,056
G
Lsm6
LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated
part_of
IBA ISO
GO_REF:0000033 (PMID:26912367), (PMID:30975767)
GO_Central RGD
PMID:26912367 PMID:30975767
GO_REF:0000033
NCBI chr19:29,098,254...29,112,858
Ensembl chr13:42,114,032...42,116,484 Ensembl chr19:42,114,032...42,116,484
G
Lsm6l1
LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated like 1
part_of
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr13:42,114,013...42,116,559
Ensembl chr13:42,114,032...42,116,484
G
Lsm7
LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated
part_of
ISO
(PMID:26912367), (PMID:30975767)
RGD
PMID:26912367 PMID:30975767
NCBI chr 7:8,856,698...8,859,113
Ensembl chr 7:8,856,489...8,859,119
G
Lsm8
LSM8 homolog, U6 small nuclear RNA associated
part_of
IBA ISO
GO_REF:0000033 (PMID:26912367), (PMID:30975767)
GO_Central RGD
PMID:26912367 PMID:30975767
GO_REF:0000033
NCBI chr 4:47,306,259...47,312,125
Ensembl chr 4:47,306,295...47,314,293
G
Ppih
peptidylprolyl isomerase H
part_of
ISO
(PMID:9570313)
RGD
PMID:9570313
NCBI chr 5:132,906,324...132,924,341
Ensembl chr 5:132,906,328...132,924,267
G
Prpf18
pre-mRNA processing factor 18
part_of
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr17:73,630,560...73,661,210
Ensembl chr17:73,630,571...73,690,979
G
Prpf3
pre-mRNA processing factor 3
part_of
ISO IBA
(PMID:26912367) GO_REF:0000033
RGD GO_Central
PMID:26912367
GO_REF:0000033
NCBI chr 2:183,379,041...183,403,526
Ensembl chr 2:183,378,718...183,403,489
G
Prpf31
pre-mRNA processing factor 31
part_of
ISO
(PMID:11867543), (PMID:23793891), (PMID:26912367), (PMID:30975767)
RGD
PMID:11867543 PMID:23793891 PMID:26912367 PMID:30975767
NCBI chr 1:65,575,887...65,587,561
Ensembl chr 1:65,575,887...65,587,873
G
Prpf4
pre-mRNA splicing tri-snRNP complex factor 4
part_of
IBA ISO
GO_REF:0000033 (PMID:23793891), (PMID:30975767)
GO_Central RGD
PMID:23793891 PMID:30975767
GO_REF:0000033
NCBI chr 5:75,859,934...75,873,924
Ensembl chr 5:75,859,924...75,873,919
G
Prpf6
pre-mRNA processing factor 6
part_of
IEA ISO IBA
GO_REF:0000107 (PMID:10788320), (PMID:30975767) GO_REF:0000033
Ensembl RGD GO_Central
PMID:10788320 PMID:30975767
GO_REF:0000033 GO_REF:0000107
NCBI chr 3:168,706,952...168,771,191
Ensembl chr 3:168,704,299...168,774,991
G
Prpf8
pre-mRNA processing factor 8
part_of
ISO
(PMID:23793891), (PMID:30975767)
RGD
PMID:23793891 PMID:30975767
NCBI chr10:60,331,494...60,354,606
Ensembl chr10:60,331,494...60,354,606
G
Rbm42
RNA binding motif protein 42
part_of
ISO
(PMID:30975767)
RGD
PMID:30975767
NCBI chr 1:85,898,618...85,908,569
Ensembl chr 1:85,898,625...85,908,573
G
Sart1
spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP
part_of
IEA IBA ISO
GO_REF:0000002 GO_REF:0000033 (PMID:30975767)
InterPro GO_Central RGD
PMID:30975767
GO_REF:0000002 GO_REF:0000033
NCBI chr 1:202,690,472...202,699,136
Ensembl chr 1:202,690,459...202,699,136
G
Sart3
spliceosome associated factor 3, U4/U6 recycling protein
NOT|located_in
ISO
(PMID:12032085)
RGD
PMID:12032085
NCBI chr12:42,859,026...42,887,041
Ensembl chr12:42,859,305...42,887,038
G
Snrnp200
small nuclear ribonucleoprotein U5 subunit 200
part_of
IEA ISO
GO_REF:0000107 (PMID:23793891), (PMID:30975767)
Ensembl RGD
PMID:23793891 PMID:30975767
GO_REF:0000107
NCBI chr 3:114,428,854...114,458,194
Ensembl chr 3:114,428,854...114,458,182
G
Snrnp27
small nuclear ribonucleoprotein U4/U6.U5 subunit 27
part_of
ISO
(PMID:30975767)
RGD
PMID:30975767
NCBI chr 4:119,123,676...119,133,234
Ensembl chr 4:119,121,877...119,133,234
G
Snrnp40
small nuclear ribonucleoprotein U5 subunit 40
part_of
ISO
(PMID:30975767)
RGD
PMID:30975767
NCBI chr 5:142,700,632...142,733,776
Ensembl chr 5:142,700,534...142,733,776
G
Snrpa
small nuclear ribonucleoprotein polypeptide A
part_of
ISO
(PMID:30975767)
RGD
PMID:30975767
NCBI chr 1:82,481,770...82,490,540
Ensembl chr 1:82,481,770...82,490,538
G
Snrpb
small nuclear ribonucleoprotein polypeptides B and B1
part_of
ISS IBA ISO
GO_REF:0000024 GO_REF:0000033 (PMID:26912367), (PMID:30975767)
UniProt GO_Central RGD
PMID:26912367 PMID:30975767
GO_REF:0000024 GO_REF:0000033
NCBI chr 3:117,369,816...117,379,344
Ensembl chr 3:117,370,100...117,379,339
G
Snrpd1
small nuclear ribonucleoprotein D1 polypeptide
part_of
ISO
(PMID:26912367), (PMID:30975767)
RGD
PMID:26912367 PMID:30975767
NCBI chr18:1,696,838...1,707,400
Ensembl chr18:1,696,852...1,708,256
G
Snrpd2
small nuclear ribonucleoprotein D2 polypeptide
part_of
IBA ISO
GO_REF:0000033 (PMID:26912367), (PMID:30975767)
GO_Central RGD
PMID:26912367 PMID:30975767
GO_REF:0000033
NCBI chr 1:78,798,377...78,801,227
Ensembl chr 1:78,798,377...78,803,351
G
Snrpd3
small nuclear ribonucleoprotein D3 polypeptide
part_of
ISO
(PMID:26912367), (PMID:30975767)
RGD
PMID:26912367 PMID:30975767
NCBI chr20:13,130,112...13,145,947
Ensembl chr20:13,130,119...13,145,978
G
Snrpe
small nuclear ribonucleoprotein polypeptide E
part_of
IBA ISO
GO_REF:0000033 (PMID:26912367), (PMID:30975767)
GO_Central RGD
PMID:26912367 PMID:30975767
GO_REF:0000033
NCBI chr13:45,050,986...45,057,231
Ensembl chr13:45,050,986...45,057,310 Ensembl chr 8:45,050,986...45,057,310
G
Snrpepl2
small nuclear ribonucleoprotein polypeptide E like 2
part_of
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:133,709,656...133,710,137
Ensembl chr 1:133,709,797...133,710,075
G
Snrpf
small nuclear ribonucleoprotein polypeptide F
part_of
ISO
(PMID:26912367), (PMID:30975767)
RGD
PMID:26912367 PMID:30975767
NCBI chr 7:28,130,427...28,137,129
Ensembl chr 7:28,130,427...28,137,129
G
Snrpg
small nuclear ribonucleoprotein polypeptide G
part_of
ISO
(PMID:26912367), (PMID:30975767)
RGD
PMID:26912367 PMID:30975767
NCBI chr 4:118,812,278...118,819,827
Ensembl chr 4:118,812,252...118,819,826
G
Snrpn
small nuclear ribonucleoprotein polypeptide N
part_of
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:111,101,327...111,123,400
Ensembl chr 1:111,101,329...111,123,634
G
Snu13
small nuclear ribonucleoprotein 13
part_of
ISS IBA ISO
GO_REF:0000024 GO_REF:0000033 (PMID:26912367), (PMID:30975767)
UniProt GO_Central RGD
PMID:26912367 PMID:30975767
GO_REF:0000024 GO_REF:0000033
NCBI chr 7:113,565,293...113,570,887
Ensembl chr 7:113,565,295...113,570,872 Ensembl chr 1:113,565,295...113,570,872
G
Snu13l1
small nuclear ribonucleoprotein 13 like 1
part_of
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr X:150,624,087...150,624,525
Ensembl chr X:150,624,087...150,624,473
G
Txnl4a
thioredoxin-like 4A
part_of
ISO
(PMID:26912367), (PMID:30975767)
RGD
PMID:26912367 PMID:30975767
NCBI chr18:73,659,107...73,674,893
Ensembl chr18:73,659,107...73,674,893
G
Txnl4b
thioredoxin-like 4B
part_of
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr19:37,530,157...37,539,827
Ensembl chr19:37,530,152...37,538,521
G
Usp39
ubiquitin specific peptidase 39
part_of
ISO
(PMID:11350945), (PMID:26912367), (PMID:30975767)
RGD
PMID:11350945 PMID:26912367 PMID:30975767
NCBI chr 4:104,373,948...104,406,359
Ensembl chr 4:104,373,955...104,406,359
G
Zfp341
zinc finger protein 341
part_of
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 3:143,122,699...143,156,250
Ensembl chr 3:143,119,093...143,156,249
G
Zmat2
zinc finger, matrin type 2
part_of
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr18:28,409,606...28,414,241
Ensembl chr18:28,398,795...28,414,747
G
Prpf31
pre-mRNA processing factor 31
part_of
ISO
(PMID:21784869)
RGD
PMID:21784869
NCBI chr 1:65,575,887...65,587,561
Ensembl chr 1:65,575,887...65,587,873
G
Snu13
small nuclear ribonucleoprotein 13
part_of
ISS ISO
GO_REF:0000024 (PMID:21784869)
UniProt RGD
PMID:21784869
GO_REF:0000024
NCBI chr 7:113,565,293...113,570,887
Ensembl chr 7:113,565,295...113,570,872 Ensembl chr 1:113,565,295...113,570,872
G
Sart3
spliceosome associated factor 3, U4/U6 recycling protein
NOT|located_in
ISO
(PMID:14749385)
RGD
PMID:14749385
NCBI chr12:42,859,026...42,887,041
Ensembl chr12:42,859,305...42,887,038
G
AABR07042226.1
part_of
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
Ensembl chr X:144,806,986...144,812,552
G
Cd2bp2
Cd2 (cytoplasmic tail) binding protein 2
part_of
ISO IBA
(PMID:15840814) GO_REF:0000033
RGD GO_Central
PMID:15840814
GO_REF:0000033
NCBI chr 1:181,809,399...181,815,269
Ensembl chr 1:181,809,406...181,813,448
G
Ddx23
DEAD-box helicase 23
part_of
ISO
(PMID:9539711)
RGD
PMID:9539711
NCBI chr 7:129,797,620...129,814,909
Ensembl chr 7:129,797,614...129,814,949
G
ENSRNOG00000064062
part_of
IEA
GO_REF:0000104
UniProt
GO_REF:0000104
Ensembl chr19:33,454,456...33,455,388
G
Linc00176
long intergenic non-protein coding RNA 176
part_of
IEA
GO_REF:0000107
Ensembl
GO_REF:0000107
NCBI chr 3:168,771,350...168,775,133
Ensembl chr 3:168,704,299...168,774,991
G
Prpf18
pre-mRNA processing factor 18
part_of
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr17:73,630,560...73,661,210
Ensembl chr17:73,630,571...73,690,979
G
Prpf6
pre-mRNA processing factor 6
part_of
ISO IEA
(PMID:10788320) GO_REF:0000107
RGD Ensembl
PMID:10788320
GO_REF:0000107
NCBI chr 3:168,706,952...168,771,191
Ensembl chr 3:168,704,299...168,774,991
G
Prpf8
pre-mRNA processing factor 8
part_of
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr10:60,331,494...60,354,606
Ensembl chr10:60,331,494...60,354,606
G
Snrnp200
small nuclear ribonucleoprotein U5 subunit 200
part_of
ISO IEA
(PMID:9539711) GO_REF:0000107
RGD Ensembl
PMID:9539711
GO_REF:0000107
NCBI chr 3:114,428,854...114,458,194
Ensembl chr 3:114,428,854...114,458,182
G
Snrpb
small nuclear ribonucleoprotein polypeptides B and B1
part_of
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 3:117,369,816...117,379,344
Ensembl chr 3:117,370,100...117,379,339
G
Snrpd1
small nuclear ribonucleoprotein D1 polypeptide
part_of
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr18:1,696,838...1,707,400
Ensembl chr18:1,696,852...1,708,256
G
Snrpd2
small nuclear ribonucleoprotein D2 polypeptide
part_of
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:78,798,377...78,801,227
Ensembl chr 1:78,798,377...78,803,351
G
Snrpd3
small nuclear ribonucleoprotein D3 polypeptide
part_of
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:13,130,112...13,145,947
Ensembl chr20:13,130,119...13,145,978
G
Snrpe
small nuclear ribonucleoprotein polypeptide E
part_of
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr13:45,050,986...45,057,231
Ensembl chr13:45,050,986...45,057,310 Ensembl chr 8:45,050,986...45,057,310
G
Snrpepl2
small nuclear ribonucleoprotein polypeptide E like 2
part_of
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:133,709,656...133,710,137
Ensembl chr 1:133,709,797...133,710,075
G
Snrpg
small nuclear ribonucleoprotein polypeptide G
part_of
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 4:118,812,278...118,819,827
Ensembl chr 4:118,812,252...118,819,826
G
Snrpgl1
small nuclear ribonucleoprotein polypeptide G like 1
part_of
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:87,982,629...87,983,056
Ensembl chr 1:87,982,626...87,983,118 Ensembl chr 4:87,982,626...87,983,118
G
Snrpn
small nuclear ribonucleoprotein polypeptide N
part_of
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:111,101,327...111,123,400
Ensembl chr 1:111,101,329...111,123,634
G
Tssc4
tumor suppressing subtransferable candidate 4
is_active_in part_of
ISO IEA ISS
(PMID:35188580) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:35188580
GO_REF:0000024 GO_REF:0000107
NCBI chr 1:198,251,986...198,254,810
Ensembl chr 1:198,235,487...198,254,980
G
Txnl4a
thioredoxin-like 4A
part_of
IEA
GO_REF:0000104
UniProt
GO_REF:0000104
NCBI chr18:73,659,107...73,674,893
Ensembl chr18:73,659,107...73,674,893
G
Txnl4b
thioredoxin-like 4B
part_of
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr19:37,530,157...37,539,827
Ensembl chr19:37,530,152...37,538,521
G
Zfp341
zinc finger protein 341
part_of
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 3:143,122,699...143,156,250
Ensembl chr 3:143,119,093...143,156,249
G
AC126899.1
part_of
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
Ensembl chr19:40,146,975...40,147,500
G
Ddx39b
DExD-box helicase 39B
part_of
ISO IEA
(PMID:18593880) GO_REF:0000107
RGD Ensembl
PMID:18593880
GO_REF:0000107
NCBI chr20:3,547,702...3,585,064
Ensembl chr20:3,572,056...3,584,996
G
Lsm2
LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated
part_of
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:3,843,467...3,847,217
Ensembl chr20:3,843,466...3,847,266
G
Lsm3
LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated
part_of
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 4:124,021,023...124,027,269
Ensembl chr 4:124,021,023...124,027,269
G
Lsm4
LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated
part_of
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr16:18,755,481...18,761,106
Ensembl chr16:18,755,484...18,760,926
G
Lsm5
LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated
part_of
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 4:85,951,073...85,954,289
Ensembl chr 6:104,652,477...104,654,165 Ensembl chr 4:104,652,477...104,654,165
G
Lsm5l1
LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated like 1
part_of
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr16:1,339,769...1,340,198
Ensembl chr16:1,339,784...1,340,056
G
Lsm6
LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated
part_of
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr19:29,098,254...29,112,858
Ensembl chr19:29,098,214...29,118,682 Ensembl chr13:29,098,214...29,118,682
G
Lsm6l1
LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated like 1
part_of
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr13:42,114,013...42,116,559
Ensembl chr13:42,114,032...42,116,484
G
Lsm7
LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated
part_of
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 7:8,856,698...8,859,113
Ensembl chr 7:8,856,489...8,859,119
G
Lsm8
LSM8 homolog, U6 small nuclear RNA associated
part_of
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 4:47,306,259...47,312,125
Ensembl chr 4:47,306,295...47,314,293
G
Sart3
spliceosome associated factor 3, U4/U6 recycling protein
located_in
ISO
(PMID:14749385)
RGD
PMID:14749385
NCBI chr12:42,859,026...42,887,041
Ensembl chr12:42,859,305...42,887,038
G
Lsm10
LSM10, U7 small nuclear RNA associated
part_of
ISO
(PMID:11574479)
RGD
PMID:11574479
NCBI chr 5:138,365,983...138,375,856
Ensembl chr 5:138,373,119...138,377,505
G
Lsm11
LSM11, U7 small nuclear RNA associated
part_of
ISO IBA
(PMID:11574479) (PMID:12975319) GO_REF:0000033 (MGI:2676509|PMID:12975319)
RGD GO_Central
PMID:11574479 PMID:12975319
GO_REF:0000033 MGI:2676509
NCBI chr10:30,367,841...30,385,956
Ensembl chr10:30,370,727...30,385,944
G
Snrpb
small nuclear ribonucleoprotein polypeptides B and B1
part_of
ISO ISS
(PMID:11574479) GO_REF:0000024
RGD UniProt
PMID:11574479
GO_REF:0000024
NCBI chr 3:117,369,816...117,379,344
Ensembl chr 3:117,370,100...117,379,339
G
Snrpd3
small nuclear ribonucleoprotein D3 polypeptide
part_of
ISO
(PMID:11574479)
RGD
PMID:11574479
NCBI chr20:13,130,112...13,145,947
Ensembl chr20:13,130,119...13,145,978
G
Snrpe
small nuclear ribonucleoprotein polypeptide E
part_of
ISO
(PMID:11574479)
RGD
PMID:11574479
NCBI chr13:45,050,986...45,057,231
Ensembl chr13:45,050,986...45,057,310 Ensembl chr 8:45,050,986...45,057,310
G
Snrpf
small nuclear ribonucleoprotein polypeptide F
part_of
ISO
(PMID:11574479)
RGD
PMID:11574479
NCBI chr 7:28,130,427...28,137,129
Ensembl chr 7:28,130,427...28,137,129
G
Snrpg
small nuclear ribonucleoprotein polypeptide G
part_of
ISO
(PMID:11574479)
RGD
PMID:11574479
NCBI chr 4:118,812,278...118,819,827
Ensembl chr 4:118,812,252...118,819,826
Term paths to the root one shortest all shortest one longest all longest one shortest and longest all