Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

ONTOLOGY REPORT - ANNOTATIONS

Term:neuron projection cytoplasm
go back to main search page
Accession:GO:0120111 term browser browse the term
Definition:All of the contents of a plasma membrane bounded neuron projection, excluding the plasma membrane surrounding the projection.


show annotations for term's descendants           Sort by:
neuron projection cytoplasm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chrna2 cholinergic receptor nicotinic alpha 2 subunit IDA MMO:0000293, MMO:0000656 RGD PMID:19385992 RGD:152995360 NCBI chr15:40,342,317...40,358,601
Ensembl chr15:40,342,317...40,358,601 		JBrowse link
axon cytoplasm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actr10 actin related protein 10 located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 6:89,446,141...89,472,350
Ensembl chr 6:89,446,093...89,473,047 		JBrowse link
G Agbl4 AGBL carboxypeptidase 4 located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 5:125,254,963...126,534,367
Ensembl chr 5:125,254,956...126,534,367 		JBrowse link
G Agtpbp1 ATP/GTP binding carboxypeptidase 1 located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr17:5,120,540...5,238,874
Ensembl chr17:5,120,609...5,238,869 		JBrowse link
G Ank3 ankyrin 3 located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr20:18,602,267...19,225,831
Ensembl chr20:18,602,786...19,086,300 		JBrowse link
G Ap3b1 adaptor related protein complex 3 subunit beta 1 located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 2:25,600,069...25,800,937
Ensembl chr 2:25,600,040...25,800,935 		JBrowse link
G Ap3d1 adaptor related protein complex 3 subunit delta 1 located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 7:8,970,249...9,005,651
Ensembl chr 7:8,970,291...9,005,643 		JBrowse link
G Ap3m1 adaptor related protein complex 3 subunit mu 1 located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr15:3,246,616...3,264,846
Ensembl chr15:3,246,926...3,264,844 		JBrowse link
G Ap3m2 adaptor related protein complex 3 subunit mu 2 located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr16:69,217,526...69,237,372
Ensembl chr16:69,217,633...69,235,431 		JBrowse link
G Ap3s1 adaptor related protein complex 3 subunit sigma 1 located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr18:39,462,728...39,531,622
Ensembl chr18:39,462,765...39,531,622 		JBrowse link
G Ap3s2 adaptor related protein complex 3 subunit sigma 2 located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:133,818,825...133,859,269
Ensembl chr 1:133,818,825...133,859,322 		JBrowse link
G Arl8a ARF like GTPase 8A located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr13:46,585,845...46,594,851
Ensembl chr13:46,585,845...46,594,851 		JBrowse link
G Arl8b ARF like GTPase 8B located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 4:141,748,634...141,792,605
Ensembl chr 4:141,748,587...141,792,596 		JBrowse link
G Armcx3 armadillo repeat containing, X-linked 3 located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr  X:97,937,115...97,942,098
Ensembl chr  X:97,936,999...97,942,098 		JBrowse link
G Bend5 BEN domain containing 5 located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 5:126,290,648...126,336,662
Ensembl chr 5:125,254,956...126,534,367 		JBrowse link
G Bloc1s1 biogenesis of lysosomal organelles complex-1, subunit 1 located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 7:1,347,495...1,351,103
Ensembl chr 7:1,340,934...1,351,558 		JBrowse link
G Bloc1s2 biogenesis of lysosomal organelles complex-1, subunit 2 located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:243,024,611...243,031,749
Ensembl chr 1:243,024,614...243,031,653 		JBrowse link
G Bloc1s3 biogenesis of lysosomal organelles complex-1, subunit 3 located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:79,155,873...79,158,247
Ensembl chr 1:79,155,693...79,158,505 		JBrowse link
G Bloc1s4 biogenesis of lysosomal organelles complex 1 subunit 4 located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr14:74,043,025...74,044,325
Ensembl chr14:74,043,015...74,044,531 		JBrowse link
G Bloc1s5 biogenesis of lysosomal organelles complex 1 subunit 5 located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr17:26,171,965...26,197,276
Ensembl chr17:26,172,018...26,197,251 		JBrowse link
G Bloc1s6 biogenesis of lysosomal organelles complex 1 subunit 6 located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 3:109,816,397...109,826,528
Ensembl chr 3:109,816,366...109,828,308 		JBrowse link
G Bsn bassoon (presynaptic cytomatrix protein) located_in IDA PMID:19380881 SynGO-UCL PMID:19380881 RGD:12793047 NCBI chr 8:108,784,849...108,875,819
Ensembl chr 8:108,788,542...108,875,819 		JBrowse link
G Cacna1c calcium voltage-gated channel subunit alpha1 C ISO RGD (All species) (All species) NCBI chr 4:151,764,138...152,379,454
Ensembl chr 4:151,764,138...152,379,648 		JBrowse link
G Caly calcyon neuron-specific vesicular protein located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:194,862,671...194,873,861
Ensembl chr 1:194,862,672...194,873,551 		JBrowse link
G Dlg2 discs large MAGUK scaffold protein 2 located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:144,451,653...146,503,949
Ensembl chr 1:144,451,472...146,499,475 		JBrowse link
G Dst dystonin located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 9:36,135,657...36,529,617
Ensembl chr 9:36,135,284...36,529,615 		JBrowse link
G Dtnbp1 dystrobrevin binding protein 1 located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr17:19,685,218...19,776,668
Ensembl chr17:19,685,215...19,776,661 		JBrowse link
G Dync1h1 dynein cytoplasmic 1 heavy chain 1 located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 6:129,615,208...129,680,888
Ensembl chr 6:129,609,397...129,680,883 		JBrowse link
G Dync1i1 dynein cytoplasmic 1 intermediate chain 1 located_in IDA PMID:19380881 SynGO-UCL PMID:19380881 RGD:12793047 NCBI chr 4:33,852,597...34,166,159
Ensembl chr 4:33,852,927...34,166,149 		JBrowse link
G Dynll1 dynein light chain LC8-type 1 IDA RGD PMID:19641106 RGD:13207432 NCBI chr12:41,312,365...41,316,157
Ensembl chr12:41,312,367...41,314,741 		JBrowse link
G Dynlrb1 dynein light chain roadblock-type 1 located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 3:143,742,427...143,764,227
Ensembl chr 3:143,742,586...143,764,227 		JBrowse link
G Fbxw11 F-box and WD repeat domain containing 11 located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:17,232,735...17,330,574
Ensembl chr10:17,227,181...17,330,571 		JBrowse link
G Fmr1 fragile X messenger ribonucleoprotein 1 located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr  X:147,240,239...147,278,057
Ensembl chr  X:147,240,301...147,278,050 		JBrowse link
G Hap1 huntingtin-associated protein 1 located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:85,277,890...85,286,126
Ensembl chr10:85,277,890...85,286,126 		JBrowse link
G Hdac6 histone deacetylase 6 located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr  X:14,550,645...14,572,445
Ensembl chr  X:14,551,044...14,572,441 		JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 6:92,624,059...92,669,262
Ensembl chr 6:92,624,390...92,669,261 		JBrowse link
G Hsbp1 heat shock factor binding protein 1 located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr19:47,401,039...47,405,373
Ensembl chr19:47,400,966...47,435,821 		JBrowse link
G Hspb1 heat shock protein family B (small) member 1 located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr12:20,794,014...20,795,675
Ensembl chr12:20,794,028...20,795,743 		JBrowse link
G Kif1a kinesin family member 1A located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 9:93,563,033...93,647,412
Ensembl chr 9:93,563,045...93,647,480 		JBrowse link
G Kif1b kinesin family member 1B located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 5:159,607,697...159,742,778
Ensembl chr 5:159,561,271...159,742,778 		JBrowse link
G Kif1c kinesin family member 1C located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:55,414,412...55,444,587
Ensembl chr10:55,415,900...55,443,545 		JBrowse link
G Kif21a kinesin family member 21A located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 7:122,062,523...122,179,051
Ensembl chr 7:122,062,537...122,178,999 		JBrowse link
G Kif2a kinesin family member 2A located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 2:38,367,998...38,431,237
Ensembl chr 2:38,367,998...38,431,508 		JBrowse link
G Kif3a kinesin family member 3a IDA RGD PMID:15266650 RGD:11049593 NCBI chr10:37,725,930...37,761,183
Ensembl chr10:37,725,970...37,759,191 		JBrowse link
G Kif5a kinesin family member 5A located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 7:63,051,894...63,089,024
Ensembl chr 7:63,049,424...63,092,858 		JBrowse link
G Kif5b kinesin family member 5B located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr17:51,489,904...51,527,508
Ensembl chr17:51,489,944...51,527,508 		JBrowse link
G Kif5c kinesin family member 5C located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 3:34,032,082...34,185,597
Ensembl chr 3:34,032,105...34,182,413 		JBrowse link
G Map1a microtubule-associated protein 1A located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 3:108,263,217...108,283,936
Ensembl chr 3:108,263,151...108,282,899 		JBrowse link
G Map6 microtubule-associated protein 6 located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:153,568,020...153,634,415
Ensembl chr 1:153,568,368...153,634,414 		JBrowse link
G Mapk8ip3 mitogen-activated protein kinase 8 interacting protein 3 located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:13,918,417...13,958,335
Ensembl chr10:13,918,400...13,958,273 		JBrowse link
G Mgarp mitochondria-localized glutamic acid-rich protein located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 2:135,431,283...135,439,425
Ensembl chr 2:135,431,283...135,439,612 		JBrowse link
G Ndel1 nudE neurodevelopment protein 1-like 1 located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:53,505,628...53,582,025
Ensembl chr10:53,516,491...53,570,907 		JBrowse link
G Nefl neurofilament light chain located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr15:42,301,920...42,305,793
Ensembl chr15:42,301,916...42,305,793 		JBrowse link
G Neto1 neuropilin and tolloid like 1 located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr18:79,635,633...79,753,913
Ensembl chr18:79,635,633...79,749,030 		JBrowse link
G Pafah1b1 platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:59,533,042...59,591,808
Ensembl chr10:59,534,117...59,591,808 		JBrowse link
G Rab21 RAB21, member RAS oncogene family located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 7:50,904,050...50,928,890
Ensembl chr 7:50,904,057...50,928,839 		JBrowse link
G Rab27b RAB27B, member RAS oncogene family located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr18:63,597,554...63,794,124
Ensembl chr18:63,600,937...63,757,180 		JBrowse link
G Ranbp1 RAN binding protein 1 IDA RGD PMID:18667152 RGD:9835000 NCBI chr11:82,742,603...82,750,836
Ensembl chr11:82,742,600...82,750,838 		JBrowse link
G Rangap1 RAN GTPase activating protein 1 IDA RGD PMID:18667152 RGD:9835000 NCBI chr 7:113,224,695...113,250,441
Ensembl chr 7:113,224,703...113,250,438 		JBrowse link
G Snapin SNAP-associated protein located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 2:175,971,575...175,974,164
Ensembl chr 2:175,971,257...175,974,231 		JBrowse link
G Sod1 superoxide dismutase 1 located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr11:29,456,673...29,462,249
Ensembl chr11:29,456,558...29,462,249 		JBrowse link
G Spast spastin located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 6:21,055,349...21,106,586
Ensembl chr 6:21,055,349...21,107,954 		JBrowse link
G Spg7 SPG7 matrix AAA peptidase subunit, paraplegin located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr19:51,117,088...51,151,228
Ensembl chr19:51,117,057...51,150,484 		JBrowse link
G Sybu syntabulin located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 7:75,847,000...75,948,919
Ensembl chr 7:75,847,003...75,948,828 		JBrowse link
G Terf2 telomeric repeat binding factor 2 located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr19:34,976,963...35,005,813
Ensembl chr19:34,977,471...35,005,819 		JBrowse link
G Tmem108 transmembrane protein 108 located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 8:104,066,081...104,360,172
Ensembl chr 8:104,066,078...104,360,094 		JBrowse link
G Trak1 trafficking kinesin protein 1 located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 8:120,984,445...121,139,357
Ensembl chr 8:120,984,431...121,139,367 		JBrowse link
G Trak2 trafficking kinesin protein 2 located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 9:60,348,531...60,414,036
Ensembl chr 9:60,350,012...60,413,996 		JBrowse link
G Trim46 tripartite motif-containing 46 located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 2:174,641,494...174,654,237
Ensembl chr 2:174,641,496...174,654,141 		JBrowse link
G Uchl1 ubiquitin C-terminal hydrolase L1 located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr14:41,485,031...41,495,590
Ensembl chr14:41,485,031...41,495,590 		JBrowse link
G Zc3h14 zinc finger CCCH type containing 14 located_in ISO
IEA		 (PMID:28793261)
GO_REF:0000107		 RGD
Ensembl		 PMID:28793261 GO_REF:0000107 NCBI chr 6:118,006,420...118,044,480
Ensembl chr 6:118,006,458...118,044,105 		JBrowse link
dendrite cytoplasm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07046707.1 located_in IEA GO_REF:0000108 GOC GO_REF:0000108
G Abhd12 abhydrolase domain containing 12, lysophospholipase located_in ISO (PMID:27307232) RGD PMID:27307232 NCBI chr 3:139,659,315...139,719,529
Ensembl chr 3:139,659,317...139,719,564 		JBrowse link
G Abhd13 abhydrolase domain containing 13 located_in ISO (PMID:27307232) RGD PMID:27307232 NCBI chr16:79,501,879...79,516,712
Ensembl chr16:79,501,727...79,516,748 		JBrowse link
G Ada adenosine deaminase IDA RGD PMID:2253038 RGD:2291858 NCBI chr 3:152,398,745...152,422,854
Ensembl chr 3:152,398,747...152,447,088 		JBrowse link
G Camk2a calcium/calmodulin-dependent protein kinase II alpha located_in IDA PMID:1419001 BHF-UCL PMID:1419001 RGD:68238 NCBI chr18:54,378,642...54,441,120
Ensembl chr18:54,378,784...54,438,994 		JBrowse link
G Canx calnexin IDA RGD PMID:10461883 RGD:2313156 NCBI chr10:34,623,865...34,656,866
Ensembl chr10:34,625,191...34,656,821 		JBrowse link
G Cdkl5 cyclin-dependent kinase-like 5 located_in
is_active_in		 IDA
IBA		 PMID:20861382
GO_REF:0000033		 GO_Central PMID:20861382 GO_REF:0000033, RGD:8554575 NCBI chr  X:33,757,605...33,988,075
Ensembl chr  X:33,821,257...33,986,582 		JBrowse link
G Dlg4 discs large MAGUK scaffold protein 4 located_in IDA PMID:1419001 BHF-UCL PMID:1419001 RGD:68238 NCBI chr10:54,740,700...54,769,097
Ensembl chr10:54,739,470...54,767,153 		JBrowse link
G Flot2 flotillin 2 located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:62,926,047...62,947,759
Ensembl chr10:62,920,665...62,947,756 		JBrowse link
G Gabarapl1 GABA type A receptor associated protein like 1 IDA RGD PMID:16650615 RGD:4890439 NCBI chr 4:162,980,309...162,989,452
Ensembl chr 4:162,980,249...162,989,450 		JBrowse link
G Gria2 glutamate ionotropic receptor AMPA type subunit 2 IDA RGD PMID:17207780 RGD:1642304 NCBI chr 2:165,949,379...166,069,510
Ensembl chr 2:165,947,521...166,069,510 		JBrowse link
G Grik2 glutamate ionotropic receptor kainate type subunit 2 IDA RGD PMID:15844209 RGD:1642495 NCBI chr20:52,135,325...52,833,061
Ensembl chr20:52,133,851...52,838,375 		JBrowse link
G Grik3 glutamate ionotropic receptor kainate type subunit 3 IDA RGD PMID:15844209 RGD:1642495 NCBI chr 5:137,767,865...137,989,617
Ensembl chr 5:137,767,865...137,984,307 		JBrowse link
G Hpca hippocalcin IDA RGD PMID:8233019 RGD:9686436 NCBI chr 5:141,455,616...141,466,252
Ensembl chr 5:141,455,613...141,463,841 		JBrowse link
G Kcnab1 potassium voltage-gated channel subfamily A regulatory beta subunit 1 IDA RGD PMID:8756417 RGD:9743934 NCBI chr 2:149,137,025...149,603,540
Ensembl chr 2:149,137,041...149,603,534 		JBrowse link
G Kif1a kinesin family member 1A located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 9:93,563,033...93,647,412
Ensembl chr 9:93,563,045...93,647,480 		JBrowse link
G Kif21b kinesin family member 21B located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr13:47,576,129...47,626,112
Ensembl chr13:47,576,160...47,626,127 		JBrowse link
G Kif3a kinesin family member 3a located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:37,725,930...37,761,183
Ensembl chr10:37,725,970...37,759,191 		JBrowse link
G Kif3b kinesin family member 3B located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 3:141,758,466...141,798,012
Ensembl chr 3:141,758,466...141,797,963 		JBrowse link
G Kif5a kinesin family member 5A located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 7:63,051,894...63,089,024
Ensembl chr 7:63,049,424...63,092,858 		JBrowse link
G Kif5b kinesin family member 5B located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr17:51,489,904...51,527,508
Ensembl chr17:51,489,944...51,527,508 		JBrowse link
G Kif5c kinesin family member 5C located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 3:34,032,082...34,185,597
Ensembl chr 3:34,032,105...34,182,413 		JBrowse link
G Kifap3 kinesin-associated protein 3 located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr13:76,127,702...76,264,654
Ensembl chr13:76,127,696...76,264,650 		JBrowse link
G Klhl17 kelch-like family member 17 IDA RGD PMID:12063253 RGD:625502 NCBI chr 5:166,813,482...166,819,949
Ensembl chr 5:166,814,110...166,818,925 		JBrowse link
G Lrrk2 leucine-rich repeat kinase 2 located_in ISO (PMID:21696411) RGD PMID:21696411 NCBI chr 7:122,826,696...122,987,711
Ensembl chr 7:122,826,696...122,987,703 		JBrowse link
G Map2 microtubule-associated protein 2 located_in IDA PMID:3517689 ARUK-UCL PMID:3517689 RGD:13514082 NCBI chr 9:67,723,422...67,981,886
Ensembl chr 9:67,723,371...67,979,809 		JBrowse link
G Map2k1 mitogen activated protein kinase kinase 1 IDA RGD PMID:9714150 RGD:2293331 NCBI chr 8:64,683,449...64,754,900
Ensembl chr 8:64,683,449...64,755,147 		JBrowse link
G Map2k4 mitogen activated protein kinase kinase 4 IDA RGD PMID:9714150 RGD:2293331 NCBI chr10:50,343,227...50,447,956
Ensembl chr10:50,344,915...50,447,993 		JBrowse link
G Mapk1 mitogen activated protein kinase 1 IDA RGD PMID:9714150 RGD:2293331 NCBI chr11:83,957,813...84,023,629
Ensembl chr11:83,957,813...84,023,616 		JBrowse link
G Mapk8 mitogen-activated protein kinase 8 IDA RGD PMID:9714150 RGD:2293331 NCBI chr16:8,638,897...8,721,960
Ensembl chr16:8,638,924...8,721,981 		JBrowse link
G Oprm1 opioid receptor, mu 1 IDA RGD PMID:16194531 RGD:2316627 NCBI chr 1:43,160,057...43,413,409
Ensembl chr 1:43,160,057...43,413,409 		JBrowse link
G Rab17 RAB17, member RAS oncogene family located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 9:91,552,924...91,566,759
Ensembl chr 9:91,553,464...91,566,451 		JBrowse link
G Septin9 septin 9 located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:102,409,798...102,579,056
Ensembl chr10:102,409,711...102,579,055 		JBrowse link
G Sod1 superoxide dismutase 1 located_in ISO
IEA
ISS		 (PMID:17324120)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:17324120 GO_REF:0000024 GO_REF:0000107 NCBI chr11:29,456,673...29,462,249
Ensembl chr11:29,456,558...29,462,249 		JBrowse link
G Stau2 staufen double-stranded RNA binding protein 2 located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 5:2,840,741...3,084,935
Ensembl chr 5:2,840,765...3,084,929 		JBrowse link
G Trak2 trafficking kinesin protein 2 located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 9:60,348,531...60,414,036
Ensembl chr 9:60,350,012...60,413,996 		JBrowse link
G Uhmk1 U2AF homology motif kinase 1 located_in IEA
ISO		 GO_REF:0000107
(PMID:19015237)		 Ensembl
RGD		 PMID:19015237 GO_REF:0000107 NCBI chr13:82,396,646...82,416,292
Ensembl chr13:82,401,187...82,416,292 		JBrowse link
G Uhmk1l1 U2AF homology motif kinase 1l1 located_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr17:42,241,640...42,243,666 JBrowse link
G Wasf1 WASP family member 1 located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr20:44,325,815...44,372,999
Ensembl chr20:44,325,795...44,372,996 		JBrowse link
G Wls Wnt ligand secretion mediator IDA RGD PMID:22001156 RGD:7488965 NCBI chr 2:248,931,885...249,047,248
Ensembl chr 2:248,931,903...249,048,298 		JBrowse link
G Zc3h14 zinc finger CCCH type containing 14 located_in ISO
IEA		 (PMID:28793261)
GO_REF:0000107		 RGD
Ensembl		 PMID:28793261 GO_REF:0000107 NCBI chr 6:118,006,420...118,044,480
Ensembl chr 6:118,006,458...118,044,105 		JBrowse link
dendritic spine cytoplasm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Baiap2 BAR/IMD domain containing adaptor protein 2 IDA RGD PMID:15673667 RGD:9684988 NCBI chr10:105,223,065...105,290,130
Ensembl chr10:105,223,090...105,290,134 		JBrowse link
neuronal ribonucleoprotein granule term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arc activity-regulated cytoskeleton-associated protein located_in ISO (PMID:23936366) RGD PMID:23936366 NCBI chr 7:106,555,968...106,559,697
Ensembl chr 7:106,555,785...106,559,378 		JBrowse link
G Ckap5 cytoskeleton associated protein 5 located_in ISO (PMID:23936366) RGD PMID:23936366 NCBI chr 3:77,491,195...77,593,300
Ensembl chr 3:77,491,276...77,593,264 		JBrowse link
G Eif4ebp2 eukaryotic translation initiation factor 4E binding protein 2 is_active_in ISO (PMID:30765518) RGD PMID:30765518 NCBI chr20:29,379,444...29,400,110
Ensembl chr20:29,382,668...29,399,946 		JBrowse link
G Fmr1 fragile X messenger ribonucleoprotein 1 located_in
is_active_in		 IDA
ISO		 PMID:17881655
(PMID:18539120), (PMID:21933836)
(PMID:30765518)		 RGD PMID:18539120 PMID:21933836 PMID:30765518 PMID:17881655 RGD:8553560 NCBI chr  X:147,240,239...147,278,057
Ensembl chr  X:147,240,301...147,278,050 		JBrowse link
G Hnrnpa2b1 heterogeneous nuclear ribonucleoprotein A2/B1 IDA RGD PMID:14523087 RGD:9685480 NCBI chr 4:80,534,659...80,545,297
Ensembl chr 4:80,534,651...80,545,249 		JBrowse link
G Hnrnpab heterogeneous nuclear ribonucleoprotein A/B IDA RGD PMID:21471000 RGD:9999187 NCBI chr10:35,857,040...35,862,935
Ensembl chr10:35,857,041...35,863,344 		JBrowse link
G Htt huntingtin IDA RGD PMID:22355657 RGD:6902916 NCBI chr14:75,845,836...75,996,094
Ensembl chr14:75,845,836...75,995,070 		JBrowse link
G Kif3c kinesin family member 3C located_in IDA PMID:17881655 MGI PMID:17881655 RGD:8553560 NCBI chr 6:26,367,092...26,406,033
Ensembl chr 6:26,366,531...26,406,130 		JBrowse link
G Pqbp1 polyglutamine binding protein 1 located_in ISO (PMID:21933836) RGD PMID:21933836 NCBI chr  X:14,603,516...14,608,091
Ensembl chr  X:14,603,539...14,608,087 		JBrowse link
G Uhmk1 U2AF homology motif kinase 1 located_in
is_active_in		 IEA
ISO
IBA		 GO_REF:0000107
(PMID:19015237)
GO_REF:0000033		 Ensembl
RGD
GO_Central		 PMID:19015237 GO_REF:0000033 GO_REF:0000107 NCBI chr13:82,396,646...82,416,292
Ensembl chr13:82,401,187...82,416,292 		JBrowse link
G Uhmk1l1 U2AF homology motif kinase 1l1 located_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr17:42,241,640...42,243,666 JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 20832
    cellular anatomical structure 20632
      cytoplasm 11892
        cytoplasmic region 353
          plasma membrane bounded cell projection cytoplasm 310
            neuron projection cytoplasm 113
              axon cytoplasm 70
              dendrite cytoplasm + 42
              neuronal ribonucleoprotein granule 11
Path 2
Term Annotations click to browse term
  cellular_component 20832
    cellular anatomical structure 20632
      intracellular anatomical structure 15188
        cytoplasm 11892
          cytoplasmic region 353
            plasma membrane bounded cell projection cytoplasm 310
              neuron projection cytoplasm 113
                axon cytoplasm 70
                dendrite cytoplasm + 42
                neuronal ribonucleoprotein granule 11
paths to the root