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ONTOLOGY REPORT - ANNOTATIONS

Term:neuron projection organization
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Accession:GO:0106027 term browser browse the term
Definition:A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a prolongation or process extending from a neuron, e.g. an axon, or a dendrite.


show annotations for term's descendants           Sort by:
neuron projection organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gsk3b glycogen synthase kinase 3 beta involved_in IMP PMID:15652487 ARUK-UCL PMID:15652487 RGD:10045567 NCBI chr11:76,004,502...76,154,665
Ensembl chr11:62,504,316...62,648,646 		JBrowse link
dendritic spine maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl2 ABL proto-oncogene 2, non-receptor tyrosine kinase acts_upstream_of_or_within ISO MGI:99695 (PMID:23365224) RGD PMID:23365224 NCBI chr13:71,223,902...71,319,770
Ensembl chr13:68,673,722...68,839,742 		JBrowse link
G Ckap5 cytoskeleton associated protein 5 acts_upstream_of_or_within ISO MGI:2177650|MGI:5570192 (PMID:23936366) RGD PMID:23936366 NCBI chr 3:97,946,966...98,049,050
Ensembl chr 3:77,491,276...77,593,264 		JBrowse link
G Cntnap2 contactin associated protein 2 involved_in ISO MGI:2677631 (PMID:31141683) RGD PMID:31141683 NCBI chr 4:75,109,358...77,366,258
Ensembl chr 4:74,109,472...76,362,027 		JBrowse link
G Cttn cortactin acts_upstream_of_or_within ISO
IEA		 MGI:87860 (PMID:23365224)
GO_REF:0000107		 RGD
Ensembl		 PMID:23365224 GO_REF:0000107 NCBI chr 1:209,029,048...209,064,577
Ensembl chr 1:199,599,710...199,635,164 		JBrowse link
G Igf1r insulin-like growth factor 1 receptor involved_in IGI PMID:19406747 ARUK-UCL PMID:19406747 RGD:13210538 NCBI chr 1:130,959,787...131,248,664
Ensembl chr 1:121,550,743...121,831,777 		JBrowse link
G Insr insulin receptor involved_in IGI PMID:19406747 ARUK-UCL PMID:19406747 RGD:13210538 NCBI chr12:5,991,135...6,129,275
Ensembl chr12:1,197,100...1,330,883 		JBrowse link
G Itga3 integrin subunit alpha 3 acts_upstream_of_or_within ISO
IEA		 MGI:1857792|MGI:87860 (PMID:23595732)
GO_REF:0000107		 RGD
Ensembl		 PMID:23595732 GO_REF:0000107 NCBI chr10:80,486,998...80,522,548
Ensembl chr10:79,990,161...80,022,118 		JBrowse link
G Itpka inositol-trisphosphate 3-kinase A acts_upstream_of_or_within IMP PMID:19890013 MGI PMID:19890013 RGD:8553536 NCBI chr 3:127,179,841...127,188,405
Ensembl chr 3:106,726,036...106,734,600 		JBrowse link
G Mtmr2 myotubularin related protein 2 involved_in IMP PMID:20410104 BHF-UCL PMID:20410104 RGD:8553482 NCBI chr 8:18,899,303...18,949,767
Ensembl chr 8:10,617,993...10,668,172 		JBrowse link
G Pick1 protein interacting with PRKCA 1 involved_in IMP
IBA		 PMID:18297063
GO_REF:0000033		 GO_Central PMID:18297063 GO_REF:0000033, RGD:8554748 NCBI chr 7:112,676,890...112,697,275
Ensembl chr 7:110,797,117...110,816,848 		JBrowse link
G Tanc1 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 acts_upstream_of_or_within ISO
IEA		 MGI:4125076 (PMID:21068316)
GO_REF:0000107		 RGD
Ensembl		 PMID:21068316 GO_REF:0000107 NCBI chr 3:64,508,037...64,741,826
Ensembl chr 3:44,134,016...44,331,627 		JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in ISO (PMID:31980586) RGD PMID:31980586 NCBI chr 9:20,145,215...20,151,797
Ensembl chr 9:12,647,259...12,654,170 		JBrowse link
dendritic spine morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdc42 cell division cycle 42 involved_in ISS
ISO		 GO_REF:0000024
(PMID:25851601)		 UniProt
RGD		 PMID:25851601 GO_REF:0000024 NCBI chr 5:154,838,478...154,876,629
Ensembl chr 5:149,553,724...149,593,111 		JBrowse link
G Ctnnd2 catenin delta 2 involved_in ISO
IEA		 (PMID:25807484)
GO_REF:0000107		 RGD
Ensembl		 PMID:25807484 GO_REF:0000107 NCBI chr 2:82,879,469...83,727,409
Ensembl chr 2:81,167,117...82,015,764 		JBrowse link
G Dip2a disco-interacting protein 2 homolog A involved_in ISO (PMID:31600191) RGD PMID:31600191 NCBI chr20:12,284,037...12,373,519
Ensembl chr20:12,284,654...12,370,217 		JBrowse link
G Dlg4 discs large MAGUK scaffold protein 4 involved_in IMP
ISO
IEA		 PMID:21525273
(PMID:20952458)
GO_REF:0000107		 RGD
Ensembl		 PMID:20952458 PMID:21525273 GO_REF:0000107, RGD:8554095 NCBI chr10:55,239,397...55,267,780
Ensembl chr10:54,739,470...54,767,153 		JBrowse link
G Dock10 dedicator of cytokinesis 10 involved_in ISO
IBA		 (PMID:25851601)
GO_REF:0000033		 RGD
GO_Central		 PMID:25851601 GO_REF:0000033 NCBI chr 9:89,291,936...89,549,871
Ensembl chr 9:81,843,604...82,101,525 		JBrowse link
G Dvl1 dishevelled segment polarity protein 1 involved_in IGI PMID:21670302 ParkinsonsUK-UCL PMID:21670302 RGD:10449514 NCBI chr 5:171,738,911...171,750,967
Ensembl chr 5:166,456,686...166,468,664 		JBrowse link
G Epha5 EPH receptor A5 involved_in IDA PMID:20824214 UniProt PMID:20824214 RGD:8554330 NCBI chr14:23,653,393...24,020,129
Ensembl chr14:23,653,393...24,017,317 		JBrowse link
G Ephb1 Eph receptor B1 involved_in
acts_upstream_of_or_within		 ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:14691139)
(PMID:17310244)		 UniProt
Ensembl
RGD		 PMID:14691139 PMID:17310244 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:111,386,432...111,823,759
Ensembl chr 8:102,507,549...102,944,839 		JBrowse link
G Ephb2 Eph receptor B2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:17310244)
GO_REF:0000107
(PMID:14691139)		 RGD
Ensembl		 PMID:14691139 PMID:17310244 GO_REF:0000107 NCBI chr 5:154,179,065...154,360,459
Ensembl chr 5:148,897,246...149,077,059 		JBrowse link
G Ephb3 Eph receptor B3 involved_in ISO
IEA		 (PMID:14691139)
GO_REF:0000107		 RGD
Ensembl		 PMID:14691139 GO_REF:0000107 NCBI chr11:93,345,098...93,363,775
Ensembl chr11:79,840,668...79,859,370 		JBrowse link
G Hdac6 histone deacetylase 6 acts_upstream_of_or_within ISO
IEA		 (PMID:24113571)
GO_REF:0000107		 RGD
Ensembl		 PMID:24113571 GO_REF:0000107 NCBI chr  X:17,222,538...17,244,373
Ensembl chr  X:14,551,044...14,572,441 		JBrowse link
G Myo5b myosin Vb IMP RGD PMID:18984164 RGD:11533643 NCBI chr18:70,313,717...70,613,918
Ensembl chr18:68,038,759...68,338,745 		JBrowse link
G Pak3 p21 (RAC1) activated kinase 3 involved_in ISS
ISO		 GO_REF:0000024
(PMID:25851601)		 UniProt
RGD		 PMID:25851601 GO_REF:0000024 NCBI chr  X:111,912,967...112,171,037
Ensembl chr  X:107,260,898...107,368,314 		JBrowse link
G Prmt3 protein arginine methyltransferase 3 IMP RGD PMID:20647003 RGD:9491824 NCBI chr 1:108,628,899...108,718,803
Ensembl chr 1:99,492,724...99,579,435 		JBrowse link
G Pten phosphatase and tensin homolog involved_in ISO (PMID:18082964), (PMID:21411674) RGD PMID:18082964 PMID:21411674 NCBI chr 1:240,043,707...240,110,330
Ensembl chr 1:230,630,338...230,696,838 		JBrowse link
G Septin7 septin 7 acts_upstream_of_or_within ISO (PMID:24113571) RGD PMID:24113571 NCBI chr 8:31,995,597...32,059,069
Ensembl chr 8:23,716,030...23,783,243 		JBrowse link
G Shank1 SH3 and multiple ankyrin repeat domains 1 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:18272690)		 BHF-UCL
Ensembl
RGD		 PMID:18272690 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:103,944,416...103,993,887
Ensembl chr 1:94,808,276...94,855,824 		JBrowse link
G Shank3 SH3 and multiple ankyrin repeat domains 3 involved_in
acts_upstream_of_or_within		 ISS
ISO
IEA		 GO_REF:0000024
(PMID:21167025), (PMID:21423165), (PMID:21558424)
MGI:5056336 (PMID:21558424)
GO_REF:0000107		 BHF-UCL
RGD
Ensembl		 PMID:21167025 PMID:21423165 PMID:21558424 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:122,448,323...122,518,623
Ensembl chr 7:120,570,402...120,630,374 		JBrowse link
G Wasl WASP like actin nucleation promoting factor involved_in ISS
ISO		 GO_REF:0000024
(PMID:25851601)		 UniProt
RGD		 PMID:25851601 GO_REF:0000024 NCBI chr 4:54,049,081...54,097,653
Ensembl chr 4:53,083,536...53,132,022 		JBrowse link
G Wnt7a Wnt family member 7A involved_in ISO
IEA		 (PMID:21670302)
GO_REF:0000107
UniProtKB:Q9WVB9 (PMID:21670302)		 RGD
Ensembl		 PMID:21670302 GO_REF:0000107 NCBI chr 4:125,420,276...125,466,149
Ensembl chr 4:123,863,108...123,908,981 		JBrowse link
G Zfp365 zinc finger protein 365 involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:25983680)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:25983680 GO_REF:0000024 GO_REF:0000107 NCBI chr20:20,666,240...20,689,734
Ensembl chr20:20,666,240...20,691,238 		JBrowse link
dendritic spine organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arf1 ARF GTPase 1 involved_in IMP PMID:23889934 UniProt PMID:23889934 RGD:8553918 NCBI chr10:44,497,543...44,513,994
Ensembl chr10:43,997,986...44,014,434 		JBrowse link
G Chrna7 cholinergic receptor nicotinic alpha 7 subunit involved_in IEA
ISO		 GO_REF:0000107
(PMID:23270857)		 Ensembl
RGD		 PMID:23270857 GO_REF:0000107 NCBI chr 1:126,123,425...126,249,181
Ensembl chr 1:116,714,711...116,837,240 		JBrowse link
G Cntnap2 contactin associated protein 2 involved_in ISO MGI:2677631 (PMID:31141683) RGD PMID:31141683 NCBI chr 4:75,109,358...77,366,258
Ensembl chr 4:74,109,472...76,362,027 		JBrowse link
G Dlg4 discs large MAGUK scaffold protein 4 involved_in IMP PMID:26679993 UniProt PMID:26679993 RGD:11085451 NCBI chr10:55,239,397...55,267,780
Ensembl chr10:54,739,470...54,767,153 		JBrowse link
G Grin2a glutamate ionotropic receptor NMDA type subunit 2A involved_in IMP PMID:26679993 UniProt PMID:26679993 RGD:11085451 NCBI chr10:6,136,458...6,560,003
Ensembl chr10:5,631,369...6,044,637 		JBrowse link
G Lgmn legumain involved_in ISO
IEA		 UniProtKB:P10636 (PMID:25326800)
GO_REF:0000107		 RGD
Ensembl		 PMID:25326800 GO_REF:0000107 NCBI chr 6:127,308,913...127,347,355
Ensembl chr 6:121,544,053...121,582,480 		JBrowse link
G Pick1 protein interacting with PRKCA 1 involved_in IDA PMID:21252856 UniProt PMID:21252856 RGD:8554238 NCBI chr 7:112,676,890...112,697,275
Ensembl chr 7:110,797,117...110,816,848 		JBrowse link
G Rph3a rabphilin 3A involved_in IMP PMID:26679993 UniProt PMID:26679993 RGD:11085451 NCBI chr12:41,203,004...41,279,536
Ensembl chr12:35,542,728...35,617,592 		JBrowse link
negative regulation of dendritic spine maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoe apolipoprotein E acts_upstream_of_or_within ISO (PMID:24328732) RGD PMID:24328732 NCBI chr 1:88,481,889...88,485,816
Ensembl chr 1:79,353,916...79,357,932 		JBrowse link
G Cfl1 cofilin 1 involved_in IMP
NAS		 PMID:17360908 RGD
ARUK-UCL		 PMID:23974706 PMID:17360908 RGD:11570553, RGD:12793018 NCBI chr 1:212,227,124...212,230,656
Ensembl chr 1:202,786,627...202,817,587 		JBrowse link
G Fyn FYN proto-oncogene, Src family tyrosine kinase involved_in IEA
ISO		 GO_REF:0000107
UniProtKB:P04925|UniProtKB:Q01097 (PMID:22820466)		 Ensembl
RGD		 PMID:22820466 GO_REF:0000107 NCBI chr20:44,322,635...44,514,498
Ensembl chr20:42,766,369...42,959,911 		JBrowse link
G Grin2b glutamate ionotropic receptor NMDA type subunit 2B involved_in ISO UniProtKB:P04925|UniProtKB:P39688 (PMID:22820466) RGD PMID:22820466 NCBI chr 4:170,297,811...170,775,420
Ensembl chr 4:168,599,546...169,042,279 		JBrowse link
G Prnp prion protein involved_in ISO
IEA		 ComplexPortal:CPX-1134|UniProtKB:P39688|UniProtKB:Q01097 (PMID:22820466), (PMID:24012003)
GO_REF:0000107		 RGD
Ensembl		 PMID:22820466 PMID:24012003 GO_REF:0000107 NCBI chr 3:139,639,076...139,654,420
Ensembl chr 3:119,177,485...119,203,937 		JBrowse link
negative regulation of dendritic spine morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnm3 dynamin 3 IDA RGD PMID:17880892 RGD:8553820 NCBI chr13:76,892,381...77,371,346
Ensembl chr13:74,359,213...74,838,108 		JBrowse link
G Dtnbp1 dystrobrevin binding protein 1 IMP
IDA		 RGD PMID:20531346 PMID:20531346 RGD:11251757, RGD:11251757 NCBI chr17:19,891,313...19,982,770
Ensembl chr17:19,685,215...19,776,661 		JBrowse link
G Efna1 ephrin A1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:17143272)		 UniProt
RGD		 PMID:17143272 GO_REF:0000024 NCBI chr 2:176,979,434...176,988,675
Ensembl chr 2:174,681,682...174,690,866 		JBrowse link
G Ngef neuronal guanine nucleotide exchange factor involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:17143272)		 UniProt
Ensembl
RGD		 PMID:17143272 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:95,594,823...95,692,381
Ensembl chr 9:88,146,956...88,244,914 		JBrowse link
G Nlgn1 neuroligin 1 involved_in ISO
ISS		 UniProtKB:Q99K10 (PMID:23143522)
GO_REF:0000024		 RGD
BHF-UCL		 PMID:23143522 GO_REF:0000024 NCBI chr 2:110,184,987...111,110,316
Ensembl chr 2:108,257,824...109,002,464 		JBrowse link
G Nlgn3 neuroligin 3 involved_in ISO (PMID:21808020) RGD PMID:21808020 NCBI chr  X:70,469,251...70,497,380
Ensembl chr  X:66,429,458...66,451,876 		JBrowse link
G Pten phosphatase and tensin homolog involved_in ISO (PMID:16675393) RGD PMID:16675393 NCBI chr 1:240,043,707...240,110,330
Ensembl chr 1:230,630,338...230,696,838 		JBrowse link
G Twf1 twinfilin actin-binding protein 1 IMP RGD PMID:33963280 RGD:596938166 NCBI chr 7:127,595,210...127,607,821
Ensembl chr 7:125,716,015...125,727,894 		JBrowse link
G Ube3a ubiquitin protein ligase E3A IMP RGD PMID:25867122 RGD:11079590 NCBI chr 1:119,204,244...119,297,097
Ensembl chr 1:110,070,480...110,157,250 		JBrowse link
neuron projection maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcd1 ATP binding cassette subfamily D member 1 involved_in ISO (PMID:11875044), (PMID:15489218) RGD PMID:11875044 PMID:15489218 NCBI chr  X:156,579,669...156,601,448
Ensembl chr  X:151,428,578...151,450,115 		JBrowse link
G Abcd2 ATP binding cassette subfamily D member 2 involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:15489218)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:15489218 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:124,142,597...124,191,202
Ensembl chr 7:122,263,032...122,311,642 		JBrowse link
G Adcy10 adenylate cyclase 10 IMP RGD PMID:22649251 RGD:329347828 NCBI chr13:80,280,595...80,366,939
Ensembl chr13:77,768,468...77,833,951 		JBrowse link
G App amyloid beta precursor protein involved_in ISO
IEA		 UniProtKB:P04156|UniProtKB:P49768 (PMID:20445063)
GO_REF:0000107		 RGD
Ensembl		 PMID:20445063 GO_REF:0000107 NCBI chr11:37,506,207...37,724,351
Ensembl chr11:24,019,778...24,236,561 		JBrowse link
G Atp1a3 ATPase Na+/K+ transporting subunit alpha 3 involved_in ISO
IEA		 UniProtKB:P05067 (PMID:26224839)
GO_REF:0000107		 RGD
Ensembl		 PMID:26224839 GO_REF:0000107 NCBI chr 1:89,700,645...89,729,782
Ensembl chr 1:80,572,796...80,601,918 		JBrowse link
G C4h2orf81 similar to human chromosome 2 open reading frame 81 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 4:117,219,357...117,225,633
Ensembl chr 4:115,661,638...115,703,815 		JBrowse link
G Dctn1 dynactin subunit 1 involved_in ISO
IEA		 (PMID:18305234), (PMID:18364389)
GO_REF:0000107		 RGD
Ensembl		 PMID:18305234 PMID:18364389 GO_REF:0000107 NCBI chr 4:117,228,722...117,261,528
Ensembl chr 4:115,661,638...115,703,815 		JBrowse link
G Ephb2 Eph receptor B2 involved_in IEA
ISO		 GO_REF:0000107
(PMID:11585923)		 Ensembl
RGD		 PMID:11585923 GO_REF:0000107 NCBI chr 5:154,179,065...154,360,459
Ensembl chr 5:148,897,246...149,077,059 		JBrowse link
G Ins2 insulin 2 involved_in ISO ComplexPortal:CPX-1134|UniProtKB:P15127 (PMID:19188609) RGD PMID:19188609 NCBI chr 1:207,272,738...207,421,998
Ensembl chr 1:197,843,281...197,864,775 		JBrowse link
G Insr insulin receptor involved_in IGI PMID:19188609 ARUK-UCL PMID:19188609 RGD:12907552 NCBI chr12:5,991,135...6,129,275
Ensembl chr12:1,197,100...1,330,883 		JBrowse link
G Kifbp kinesin family binding protein involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:31,055,625...31,075,232
Ensembl chr20:30,512,901...30,532,476 		JBrowse link
G Map1a microtubule-associated protein 1A involved_in ISO (PMID:25788676) RGD PMID:25788676 NCBI chr 3:128,716,907...128,736,638
Ensembl chr 3:108,263,151...108,282,899 		JBrowse link
G Nmnat3 nicotinamide nucleotide adenylyltransferase 3 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 8:107,771,124...107,888,528
Ensembl chr 8:98,873,398...99,020,645 		JBrowse link
G Prnp prion protein involved_in ISO
IEA		 UniProtKB:P12023|UniProtKB:P49769 (PMID:20445063)
GO_REF:0000107		 RGD
Ensembl		 PMID:20445063 GO_REF:0000107 NCBI chr 3:139,639,076...139,654,420
Ensembl chr 3:119,177,485...119,203,937 		JBrowse link
G Psen1 presenilin 1 involved_in ISO
IEA		 UniProtKB:P04156|UniProtKB:P05067 (PMID:20445063)
GO_REF:0000107		 RGD
Ensembl		 PMID:20445063 GO_REF:0000107 NCBI chr 6:109,054,160...109,106,191
Ensembl chr 6:103,323,120...103,371,650 		JBrowse link
neuron projection retraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adcy10 adenylate cyclase 10 IMP RGD PMID:22649251 RGD:329347828 NCBI chr13:80,280,595...80,366,939
Ensembl chr13:77,768,468...77,833,951 		JBrowse link
G Ctnnd2 catenin delta 2 IMP RGD PMID:32554807 RGD:407532699 NCBI chr 2:82,879,469...83,727,409
Ensembl chr 2:81,167,117...82,015,764 		JBrowse link
G Diaph1 diaphanous-related formin 1 acts_upstream_of_or_within ISO MGI:1858500 (PMID:23890216) RGD PMID:23890216 NCBI chr18:29,920,889...30,020,280
Ensembl chr18:29,669,659...29,769,172 		JBrowse link
G Diaph2 diaphanous-related formin 2 acts_upstream_of_or_within ISO MGI:1194490 (PMID:23890216) RGD PMID:23890216 NCBI chr  X:96,700,535...97,528,080
Ensembl chr  X:92,395,251...93,229,869 		JBrowse link
G Ephb2 Eph receptor B2 involved_in ISO
IEA		 (PMID:11585923)
GO_REF:0000107		 RGD
Ensembl		 PMID:11585923 GO_REF:0000107 NCBI chr 5:154,179,065...154,360,459
Ensembl chr 5:148,897,246...149,077,059 		JBrowse link
positive regulation of dendritic spine maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoe apolipoprotein E acts_upstream_of_or_within ISO
IEA		 (PMID:24328732)
GO_REF:0000107		 RGD
Ensembl		 PMID:24328732 GO_REF:0000107 NCBI chr 1:88,481,889...88,485,816
Ensembl chr 1:79,353,916...79,357,932 		JBrowse link
G Erbb4 erb-b2 receptor tyrosine kinase 4 IMP RGD PMID:30206770 RGD:405650589 NCBI chr 9:76,973,386...78,045,633
Ensembl chr 9:69,531,481...70,596,595 		JBrowse link
G Grin1 glutamate ionotropic receptor NMDA type subunit 1 involved_in IGI PMID:17360908 ARUK-UCL PMID:17360908 RGD:12793018 NCBI chr 3:28,501,836...28,528,754
Ensembl chr 3:8,103,680...8,130,603 		JBrowse link
G Ins2 insulin 2 involved_in ISO ComplexPortal:CPX-1134 (PMID:19188609) RGD PMID:19188609 NCBI chr 1:207,272,738...207,421,998
Ensembl chr 1:197,843,281...197,864,775 		JBrowse link
G Nedd9 neural precursor cell expressed, developmentally down-regulated 9 involved_in ISO (PMID:26683084) RGD PMID:26683084 NCBI chr17:23,495,531...23,673,780
Ensembl chr17:23,282,326...23,468,019 		JBrowse link
G Zfp804a zinc finger protein 804A involved_in IMP PMID:27837918 UniProt PMID:27837918 RGD:13210564 NCBI chr 3:87,440,496...87,670,872
Ensembl chr 3:67,034,170...67,263,607 		JBrowse link
G Zmynd8 zinc finger, MYND-type containing 8 IMP RGD PMID:24117785 RGD:8554267 NCBI chr 3:174,948,162...175,061,382
Ensembl chr 3:154,529,043...154,628,463 		JBrowse link
positive regulation of dendritic spine morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actr2 actin related protein 2 IMP RGD PMID:23441206 RGD:11530033 NCBI chr14:98,500,119...98,535,092
Ensembl chr14:94,296,443...94,340,524 		JBrowse link
G Actr3 actin related protein 3 IMP RGD PMID:23441206 RGD:11530033 NCBI chr13:39,353,413...39,396,509
Ensembl chr13:36,800,093...36,844,124 		JBrowse link
G Afdn afadin, adherens junction formation factor IMP RGD PMID:22948147 RGD:13838731 NCBI chr 1:58,041,065...58,170,505
Ensembl chr 1:53,905,373...54,034,216 		JBrowse link
G Baiap2 BAR/IMD domain containing adaptor protein 2 IMP RGD PMID:15673667 RGD:9684988 NCBI chr10:105,721,371...105,788,549
Ensembl chr10:105,223,090...105,290,134 		JBrowse link
G Camk2b calcium/calmodulin-dependent protein kinase II beta involved_in IMP PMID:12873385 UniProt PMID:12873385 RGD:8553829 NCBI chr14:85,059,166...85,148,121
Ensembl chr14:80,845,238...80,933,994 		JBrowse link
G Caprin1 cell cycle associated protein 1 involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:20516077)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:20516077 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:110,606,489...110,685,408
Ensembl chr 3:90,153,620...90,230,502 		JBrowse link
G Caprin2 caprin family member 2 involved_in ISO (PMID:20516077) RGD PMID:20516077 NCBI chr 4:181,806,105...181,860,754
Ensembl chr 4:181,806,575...181,860,830 		JBrowse link
G Cask calcium/calmodulin dependent serine protein kinase IMP RGD PMID:18606847 RGD:11576294 NCBI chr  X:11,572,328...11,915,831
Ensembl chr  X:8,899,833...9,238,694 		JBrowse link
G Cux2 cut-like homeobox 2 involved_in ISO (PMID:20510857) RGD PMID:20510857 NCBI chr12:40,168,402...40,368,303
Ensembl chr12:34,520,959...34,705,806 		JBrowse link
G Dbn1 drebrin 1 involved_in IMP
ISO
IBA
ISS
IEA		 (PMID:25865831)
GO_REF:0000033
GO_REF:0000024
GO_REF:0000107		 RGD
GO_Central
UniProt
Ensembl		 PMID:25865831 PMID:19174472 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107, RGD:10398809 NCBI chr17:9,155,729...9,170,121
Ensembl chr17:9,150,659...9,164,984 		JBrowse link
G Dbnl drebrin-like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:84,880,085...84,895,122
Ensembl chr14:80,666,124...80,681,155 		JBrowse link
G Dhx36 DEAH-box helicase 36 involved_in IMP PMID:23651854 UniProt PMID:23651854 RGD:13792545 NCBI chr 2:149,006,089...149,044,192
Ensembl chr 2:146,856,469...146,894,572 		JBrowse link
G Dnm1l dynamin 1-like IMP RGD PMID:19605646 RGD:7800727 NCBI chr11:98,084,049...98,135,663
Ensembl chr11:84,581,216...84,631,482 		JBrowse link
G Eef2k eukaryotic elongation factor-2 kinase IMP RGD PMID:20427644 RGD:10401235 NCBI chr 1:184,824,420...184,888,048
Ensembl chr 1:175,393,154...175,455,164 		JBrowse link
G Ephb2 Eph receptor B2 IMP RGD PMID:21364901 RGD:127285794 NCBI chr 5:154,179,065...154,360,459
Ensembl chr 5:148,897,246...149,077,059 		JBrowse link
G Gprasp3 G protein-coupled receptor associated sorting protein family member 3 involved_in ISO
IEA		 (PMID:21199326)
GO_REF:0000107		 RGD
Ensembl		 PMID:21199326 GO_REF:0000107 NCBI chr  X:103,639,366...103,644,561
Ensembl chr  X:98,817,593...98,854,545 		JBrowse link
G Il1rapl1 interleukin 1 receptor accessory protein-like 1 involved_in ISO (PMID:21940441) RGD PMID:21940441 NCBI chr  X:55,322,779...56,827,486
Ensembl chr  X:51,378,215...52,876,772 		JBrowse link
G Itpka inositol-trisphosphate 3-kinase A acts_upstream_of_or_within IMP PMID:19890013 MGI PMID:19890013 RGD:8553536 NCBI chr 3:127,179,841...127,188,405
Ensembl chr 3:106,726,036...106,734,600 		JBrowse link
G Kalrn kalirin, RhoGEF kinase acts_upstream_of_or_within ISO MGI:4358076 (PMID:19625617) RGD PMID:19625617 NCBI chr11:79,703,345...80,309,210
Ensembl chr11:66,198,173...66,797,610 		JBrowse link
G Lrp8 LDL receptor related protein 8 involved_in ISO
IEA		 (PMID:21852430)
GO_REF:0000107		 RGD
Ensembl		 PMID:21852430 GO_REF:0000107 NCBI chr 5:127,792,236...127,864,207
Ensembl chr 5:122,563,453...122,631,352 		JBrowse link
G Mapre3 microtubule-associated protein, RP/EB family, member 3 IDA RGD PMID:31092585 RGD:597538596 NCBI chr 6:31,233,736...31,278,626
Ensembl chr 6:25,513,800...25,558,881 		JBrowse link
G Marcks myristoylated alanine rich protein kinase C substrate IMP RGD PMID:16202710 RGD:9685333 NCBI chr20:42,240,185...42,245,882
Ensembl chr20:40,685,315...40,691,012 		JBrowse link
G Mfn1 mitofusin 1 IMP RGD PMID:19605646 RGD:7800727 NCBI chr 2:117,240,525...117,288,017
Ensembl chr 2:115,313,401...115,359,640 		JBrowse link
G Mfn2 mitofusin 2 IMP RGD PMID:19605646 RGD:7800727 NCBI chr 5:163,587,463...163,617,363
Ensembl chr 5:158,304,287...158,335,342 		JBrowse link
G Opa1 OPA1, mitochondrial dynamin like GTPase IMP RGD PMID:19605646 RGD:7800727 NCBI chr11:84,612,943...84,690,025
Ensembl chr11:71,109,873...71,185,109 		JBrowse link
G Pafah1b1 platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 involved_in ISO
IEA		 (PMID:23483716)
GO_REF:0000107		 RGD
Ensembl		 PMID:23483716 GO_REF:0000107 NCBI chr10:60,031,441...60,090,259
Ensembl chr10:59,534,117...59,591,808 		JBrowse link
G Pak3 p21 (RAC1) activated kinase 3 IMP RGD PMID:18481281 RGD:7775053 NCBI chr  X:111,912,967...112,171,037
Ensembl chr  X:107,260,898...107,368,314 		JBrowse link
G Ptprd protein tyrosine phosphatase, receptor type, D involved_in ISO (PMID:21940441) RGD PMID:21940441 NCBI chr 5:95,093,221...97,415,498
Ensembl chr 5:90,048,966...92,369,396 		JBrowse link
G Reln reelin involved_in ISO (PMID:21664258), (PMID:21852430) RGD PMID:21664258 PMID:21852430 NCBI chr 4:13,628,440...14,055,201
Ensembl chr 4:12,736,130...13,162,211 		JBrowse link
G Slc30a1 solute carrier family 30 member 1 IMP RGD PMID:25319628 RGD:11057402 NCBI chr13:106,022,019...106,025,892
Ensembl chr13:103,491,037...103,494,910 		JBrowse link
G Srcin1 SRC kinase signaling inhibitor 1 IDA RGD PMID:31092585 RGD:597538596 NCBI chr10:82,999,295...83,066,359
Ensembl chr10:82,504,393...82,571,040 		JBrowse link
G Stau2 staufen double-stranded RNA binding protein 2 IMP RGD PMID:16418534 RGD:10043163 NCBI chr 5:7,623,528...7,868,206
Ensembl chr 5:2,840,765...3,084,929 		JBrowse link
G Tiam1 TIAM Rac1 associated GEF 1 IMP RGD PMID:16474385 RGD:10043325 NCBI chr11:42,517,527...42,866,280
Ensembl chr11:29,031,348...29,159,901 		JBrowse link
regulation of dendritic spine maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abhd17b abhydrolase domain containing 17B, depalmitoylase involved_in IEA
ISO		 GO_REF:0000107
(PMID:27307232)		 Ensembl
RGD		 PMID:27307232 GO_REF:0000107 NCBI chr 1:228,624,821...228,659,254
Ensembl chr 1:219,198,471...219,231,933 		JBrowse link
G App amyloid beta precursor protein involved_in ISO ComplexPortal:CPX-1134 (PMID:23921129) RGD PMID:23921129 NCBI chr11:37,506,207...37,724,351
Ensembl chr11:24,019,778...24,236,561 		JBrowse link
G Fcgr2b Fc gamma receptor 2B involved_in ISO UniProtKB:P05067-PRO_0000000092 (PMID:23921129) RGD PMID:23921129 NCBI chr13:85,725,897...85,740,517
Ensembl chr13:83,193,163...83,207,778 		JBrowse link
G Homer1 homer scaffold protein 1 involved_in IMP
ISS		 PMID:19345194
GO_REF:0000024		 UniProt PMID:19345194 GO_REF:0000024, RGD:8553291 NCBI chr 2:26,279,012...26,388,279
Ensembl chr 2:24,543,093...24,644,785 		JBrowse link
G Vps35 VPS35 retromer complex component involved_in ISO (PMID:26618722) RGD PMID:26618722 NCBI chr19:37,938,989...37,974,887
Ensembl chr19:21,765,749...21,801,618 		JBrowse link
regulation of dendritic spine morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abi2 abl-interactor 2 involved_in ISO (PMID:15572692) RGD PMID:15572692 NCBI chr 9:69,321,072...69,490,630
Ensembl chr 9:61,827,139...61,905,699 		JBrowse link
G Abi3bp ABI family member 3 binding protein involved_in IMP PMID:22485184 ARUK-UCL PMID:22485184 RGD:42721990 NCBI chr11:57,381,282...57,597,989
Ensembl chr11:43,913,043...44,128,929 		JBrowse link
G Adam10 ADAM metallopeptidase domain 10 IMP RGD PMID:22328515 RGD:13703034 NCBI chr 8:80,226,862...80,358,728
Ensembl chr 8:71,345,837...71,477,889 		JBrowse link
G Arc activity-regulated cytoskeleton-associated protein involved_in IGI PMID:15537891 ARUK-UCL PMID:15537891 RGD:13210528 NCBI chr 7:108,444,959...108,448,413
Ensembl chr 7:106,555,785...106,559,378 		JBrowse link
G Arhgap33 Rho GTPase activating protein 33 IMP RGD PMID:24003235 RGD:13508596 NCBI chr 1:94,903,566...94,917,074
Ensembl chr 1:85,776,108...85,789,678 		JBrowse link
G Arhgap44 Rho GTPase activating protein 44 involved_in IBA
IEA
ISO		 GO_REF:0000033
GO_REF:0000107
(PMID:24352656)		 GO_Central
Ensembl
RGD		 PMID:24352656 GO_REF:0000033 GO_REF:0000107 NCBI chr10:50,154,724...50,322,027
Ensembl chr10:49,655,584...49,824,297 		JBrowse link
G Cdk5 cyclin-dependent kinase 5 involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:17143272)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:17143272 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:11,647,098...11,651,606
Ensembl chr 4:10,754,687...10,760,112 		JBrowse link
G Cdk5r1 cyclin-dependent kinase 5 regulatory subunit 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:17143272)		 UniProt
RGD		 PMID:17143272 GO_REF:0000024 NCBI chr10:65,981,692...65,985,831
Ensembl chr10:65,483,941...65,488,456 		JBrowse link
G Cfl1 cofilin 1 involved_in ISO
IEA
ISS		 (PMID:24464040)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
ParkinsonsUK-UCL		 PMID:24464040 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:212,227,124...212,230,656
Ensembl chr 1:202,786,627...202,817,587 		JBrowse link
G Dnm3 dynamin 3 IMP RGD PMID:15741233 RGD:8554738 NCBI chr13:76,892,381...77,371,346
Ensembl chr13:74,359,213...74,838,108 		JBrowse link
G Epha4 Eph receptor A4 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:17143272)		 UniProt
Ensembl
RGD		 PMID:17143272 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:86,263,982...86,406,744
Ensembl chr 9:78,815,460...78,958,139 		JBrowse link
G Kif1a kinesin family member 1A involved_in IMP PMID:30021165 UniProt PMID:30021165 RGD:14995321 NCBI chr 9:101,010,447...101,094,891
Ensembl chr 9:93,563,045...93,647,480 		JBrowse link
G Lrrk2 leucine-rich repeat kinase 2 involved_in ISO
IEA
ISS		 (PMID:21168496)
GO_REF:0000107
UniProtKB:P23528 (PMID:24464040)
GO_REF:0000024		 RGD
Ensembl
ParkinsonsUK-UCL		 PMID:21168496 PMID:24464040 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:124,706,246...124,867,234
Ensembl chr 7:122,826,696...122,987,703 		JBrowse link
G Lzts3 leucine zipper tumor suppressor family member 3 involved_in IMP
IBA		 PMID:27252646
GO_REF:0000033		 GO_Central PMID:27252646 GO_REF:0000033, RGD:13210540 NCBI chr 3:117,850,286...117,861,132
Ensembl chr 3:117,851,702...117,860,081 		JBrowse link
G Nlgn3 neuroligin 3 involved_in ISS
ISO		 GO_REF:0000024
(PMID:21808020)		 BHF-UCL
RGD		 PMID:21808020 PMID:21808020 GO_REF:0000024, RGD:8553412 NCBI chr  X:70,469,251...70,497,380
Ensembl chr  X:66,429,458...66,451,876 		JBrowse link
G Pdlim5 PDZ and LIM domain 5 involved_in IDA PMID:19900557 UniProt PMID:19900557 RGD:8554803 NCBI chr 2:233,625,478...233,793,582
Ensembl chr 2:230,952,248...231,120,275 		JBrowse link
G Ppfia2 PTPRF interacting protein alpha 2 involved_in ISO
IEA		 (PMID:30021165)
GO_REF:0000107		 RGD
Ensembl		 PMID:30021165 GO_REF:0000107 NCBI chr 7:43,652,258...44,126,555
Ensembl chr 7:41,765,575...42,239,599 		JBrowse link
G Ppp1r9a protein phosphatase 1, regulatory subunit 9A IMP RGD PMID:15473970 RGD:10043779 NCBI chr 4:33,936,949...34,258,927
Ensembl chr 4:33,024,450...33,286,907 		JBrowse link
G Shank3 SH3 and multiple ankyrin repeat domains 3 involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:21795692)		 Ensembl
RGD		 PMID:21795692 PMID:21795692 GO_REF:0000107, RGD:7349315 NCBI chr 7:122,448,323...122,518,623
Ensembl chr 7:120,570,402...120,630,374 		JBrowse link
G Sipa1l1 signal-induced proliferation-associated 1 like 1 involved_in IDA PMID:11502259 UniProt PMID:11502259 RGD:8554032 NCBI chr 6:107,570,569...107,849,613
Ensembl chr 6:101,839,404...102,116,950 		JBrowse link
G Smad3 SMAD family member 3 IMP RGD PMID:26030849 RGD:597830060 NCBI chr 8:73,022,204...73,132,324
Ensembl chr 8:64,110,039...64,236,960 		JBrowse link
G Srcin1 SRC kinase signaling inhibitor 1 involved_in ISO
IBA
ISS		 (PMID:19146815)
GO_REF:0000033
GO_REF:0000024		 RGD
GO_Central
UniProt		 PMID:19146815 GO_REF:0000024 GO_REF:0000033 NCBI chr10:82,999,295...83,066,359
Ensembl chr10:82,504,393...82,571,040 		JBrowse link
G Tanc2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 involved_in IMP
IBA		 PMID:30021165
GO_REF:0000033		 GO_Central PMID:30021165 GO_REF:0000033, RGD:14995321 NCBI chr10:91,052,860...91,373,291
Ensembl chr10:90,553,002...90,868,756 		JBrowse link
G Zdhhc15 zinc finger DHHC-type palmitoyltransferase 15 involved_in IMP PMID:31189538 UniProt PMID:31189538 RGD:25671406 NCBI chr  X:73,633,977...73,767,451
Ensembl chr  X:69,574,124...69,701,756 		JBrowse link
vestibular receptor cell stereocilium organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pls1 plastin 1 involved_in ISO
IEA		 (PMID:25124451)
GO_REF:0000107		 RGD
Ensembl		 PMID:25124451 GO_REF:0000107 NCBI chr 8:105,196,312...105,306,252
Ensembl chr 8:96,317,849...96,385,195 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20567
    cellular process 19557
      cellular component organization or biogenesis 7115
        cellular component organization 6828
          cell projection organization 1889
            plasma membrane bounded cell projection organization 1849
              neuron projection organization 125
                dendritic spine organization + 111
                neuron projection maintenance 15
                neuron projection retraction 5
                vestibular receptor cell stereocilium organization 1
paths to the root