Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

ONTOLOGY REPORT - ANNOTATIONS

Term:presynaptic cytoskeleton
go back to main search page
Accession:GO:0099569 term browser browse the term
Definition:The portion of the cytoskeleton contained within the presynapse.


show annotations for term's descendants           Sort by:
cytoskeleton of presynaptic active zone term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BSN bassoon presynaptic cytomatrix protein located_in ISO
IEA		 RGD
TreeGrafter		 PMID:11596050 GO_REF:0000118 RGD:9850129 NCBI chr 3:49,483,652...49,603,928
Ensembl chr 3:50,790,552...50,841,178 		JBrowse link
G ERC1 ELKS/RAB6-interacting/CAST family member 1 located_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:1,066,034...1,597,562
Ensembl chr12:1,027,967...1,545,431 		JBrowse link
G ERC2 ELKS/RAB6-interacting/CAST family member 2 located_in IEA TreeGrafter GO_REF:0000118 NCBI chr 3:55,438,875...56,417,072
Ensembl chr 3:56,836,941...57,599,248 		JBrowse link
G PCLO piccolo presynaptic cytomatrix protein ISO RGD PMID:11596050 RGD:9850129 NCBI chr 7:74,714,364...75,126,518 JBrowse link
G RIMS1 regulating synaptic membrane exocytosis 1 located_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:69,714,807...70,231,260
Ensembl chr 6:73,008,176...73,523,422 		JBrowse link
G RIMS2 regulating synaptic membrane exocytosis 2 located_in IEA TreeGrafter GO_REF:0000118 NCBI chr 8:100,156,403...100,894,128 JBrowse link
G RIMS3 regulating synaptic membrane exocytosis 3 located_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:39,886,961...39,958,519
Ensembl chr 1:41,239,798...41,278,282 		JBrowse link
G RIMS4 regulating synaptic membrane exocytosis 4 located_in IEA TreeGrafter GO_REF:0000118 NCBI chr20:41,082,200...41,141,119
Ensembl chr20:42,180,764...42,234,847 		JBrowse link
presynaptic actin cytoskeleton term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTG1 actin gamma 1 is_active_in ISO PMID:9875357 SynGO PMID:9875357 RGD:13702432 NCBI chr17:75,965,911...75,968,822
Ensembl chr17:81,668,221...81,671,087 		JBrowse link
G FAM107A family with sequence similarity 107 member A is_active_in ISO (PMID:21969592) SynGO PMID:21969592 NCBI chr 3:58,494,342...58,557,712
Ensembl chr 3:59,903,602...59,967,013 		JBrowse link
presynaptic intermediate filament cytoskeleton term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NEFL neurofilament light chain located_in
is_active_in		 IEA
ISO		 (PMID:25232125) Ensembl
SynGO		 PMID:25232125 GO_REF:0000107 NCBI chr 8:24,218,510...24,224,627
Ensembl chr 8:21,134,533...21,140,694 		JBrowse link
G NEFM neurofilament medium chain is_active_in ISO (PMID:25869803) SynGO PMID:25869803 NCBI chr 8:24,181,335...24,186,701
Ensembl chr 8:21,098,005...21,107,468 		JBrowse link
G RAD51 RAD51 recombinase located_in
is_active_in		 IEA
ISO		 (PMID:18003859) Ensembl
UniProt		 PMID:18003859 GO_REF:0000107 NCBI chr15:19,638,310...19,672,474
Ensembl chr15:37,891,056...37,925,207 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 20468
    cellular anatomical structure 20035
      presynapse 830
        presynaptic cytoskeleton 13
          cytoskeleton of presynaptic active zone + 8
          presynaptic actin cytoskeleton 2
          presynaptic intermediate filament cytoskeleton 3
Path 2
Term Annotations click to browse term
  cellular_component 20468
    cellular anatomical structure 20035
      organelle 14984
        membraneless organelle 5824
          intracellular membraneless organelle 5824
            cytoskeleton 2260
              presynaptic cytoskeleton 13
                cytoskeleton of presynaptic active zone + 8
                presynaptic actin cytoskeleton 2
                presynaptic intermediate filament cytoskeleton 3
paths to the root