Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

ONTOLOGY REPORT - ANNOTATIONS

Term:synaptic membrane adhesion
go back to main search page
Accession:GO:0099560 term browser browse the term
Definition:The attachment of presynaptic membrane to postsynaptic membrane via adhesion molecules that are at least partially embedded in the plasma membrane.
Synonyms:exact_synonym: synapse adhesion between pre- and post-synapse


show annotations for term's descendants           Sort by:
synaptic membrane adhesion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CADM1 cell adhesion molecule 1 involved_in ISO (PMID:18003830) SynGO PMID:18003830 NCBI chr 9:42,644,487...42,984,934
Ensembl chr 9:42,644,431...42,985,017 		JBrowse link
G CADM2 cell adhesion molecule 2 involved_in ISO PMID:18003830 SynGO PMID:18003830 RGD:2289094 NCBI chr13:169,681,947...170,753,114
Ensembl chr13:169,688,958...170,014,005 		JBrowse link
G CADM3 cell adhesion molecule 3 involved_in ISO PMID:18003830 SynGO PMID:18003830 RGD:2289094 NCBI chr 4:91,227,362...91,260,125
Ensembl chr 4:91,227,363...91,260,097 		JBrowse link
G CADM4 cell adhesion molecule 4 involved_in ISO PMID:18003830 SynGO PMID:18003830 RGD:2289094 NCBI chr 6:50,462,439...50,478,409
Ensembl chr 6:50,462,450...50,478,383 		JBrowse link
G CDH10 cadherin 10 involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr16:12,094,687...12,277,672
Ensembl chr16:12,094,710...12,277,315 		JBrowse link
G CDH6 cadherin 6 involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr16:17,531,862...17,660,081
Ensembl chr16:17,531,892...17,660,079 		JBrowse link
G CDH9 cadherin 9 involved_in IBA GO_Central GO_REF:0000033 NCBI chr16:13,938,711...14,076,498
Ensembl chr16:13,944,245...14,076,030 		JBrowse link
G EFNA5 ephrin A5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:112,533,124...112,821,293
Ensembl chr 2:112,534,949...112,815,827 		JBrowse link
G ELFN1 extracellular leucine rich repeat and fibronectin type III domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:1,116,543...1,191,476
Ensembl chr 3:1,188,155...1,190,641 		JBrowse link
G ELFN2 extracellular leucine rich repeat and fibronectin type III domain containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:10,365,767...10,434,351
Ensembl chr 5:10,427,019...10,429,478 		JBrowse link
G EPHA3 EPH receptor A3 involved_in ISO (PMID:22275477) SynGO PMID:22275477 NCBI chr13:166,592,492...166,942,791
Ensembl chr13:166,592,493...166,942,767 		JBrowse link
G FLRT3 fibronectin leucine rich transmembrane protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:22,940,491...22,955,277
Ensembl chr17:22,940,492...22,954,424 		JBrowse link
G GPC4 glypican 4 involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr  X:109,306,489...109,421,947
Ensembl chr  X:109,306,368...109,421,785 		JBrowse link
G IGSF9B immunoglobulin superfamily member 9B involved_in ISO (PMID:23751499) SynGO PMID:23751499 NCBI chr 9:60,467,321...60,521,463
Ensembl chr 9:60,478,029...60,521,465 		JBrowse link
G IL1RAP interleukin 1 receptor accessory protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:127,933,239...128,071,984
Ensembl chr13:127,933,693...128,043,480 		JBrowse link
G IL1RAPL1 interleukin 1 receptor accessory protein like 1 involved_in ISO (PMID:21940441) BHF-UCL PMID:21940441 NCBI chr  X:24,408,092...25,811,129
Ensembl chr  X:24,409,327...25,806,680 		JBrowse link
G ITGA3 integrin subunit alpha 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:26,234,769...26,269,327
Ensembl chr12:26,235,258...26,269,324 		JBrowse link
G LRFN3 leucine rich repeat and fibronectin type III domain containing 3 involved_in ISO PMID:18227064 SynGO PMID:18227064 RGD:13702403 NCBI chr 6:45,343,846...45,352,779
Ensembl chr 6:45,346,637...45,351,990 		JBrowse link
G LRFN4 leucine rich repeat and fibronectin type III domain containing 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:5,576,625...5,579,397
Ensembl chr 2:5,576,622...5,580,009 		JBrowse link
G LRFN5 leucine rich repeat and fibronectin type III domain containing 5 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:171,906,130...172,177,726
Ensembl chr 1:171,906,198...172,177,720 		JBrowse link
G LRRC4 leucine rich repeat containing 4 involved_in IBA GO_Central GO_REF:0000033 NCBI chr18:20,319,317...20,322,875
Ensembl chr18:20,319,701...20,322,848 		JBrowse link
G LRRC4B leucine rich repeat containing 4B involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:55,346,787...55,409,876
Ensembl chr 6:55,346,908...55,409,991 		JBrowse link
G LRRC4C leucine rich repeat containing 4C involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:20,417,294...21,634,205
Ensembl chr 2:21,457,984...21,634,161 		JBrowse link
G NLGN1 neuroligin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:111,851,007...112,727,202
Ensembl chr13:112,035,854...112,725,618 		JBrowse link
G NRG1 neuregulin 1 involved_in ISO (PMID:10686589) SynGO PMID:10686589 NCBI chr15:52,625,550...53,688,003
Ensembl chr15:52,630,679...52,839,505 		JBrowse link
G NRXN1 neurexin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:89,799,426...90,914,205
Ensembl chr 3:89,803,519...90,382,034 		JBrowse link
G NTNG1 netrin G1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:112,280,899...112,615,782
Ensembl chr 4:112,287,043...112,614,544 		JBrowse link
G NTNG2 netrin G2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:272,007,513...272,077,105
Ensembl chr 1:272,012,112...272,077,018 		JBrowse link
G PCDH17 protocadherin 17 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:30,510,779...30,611,732
Ensembl chr11:30,511,275...30,611,727 		JBrowse link
G PTPRD protein tyrosine phosphatase receptor type D involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:211,832,409...214,013,013
Ensembl chr 1:213,483,348...214,009,893 		JBrowse link
G PTPRF protein tyrosine phosphatase receptor type F involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 6:167,656,674...167,743,750
Ensembl chr 6:167,657,680...167,743,721 		JBrowse link
G PTPRS protein tyrosine phosphatase receptor type S involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:73,607,815...73,680,685
Ensembl chr 2:73,574,854...73,680,686 		JBrowse link
G SLITRK1 SLIT and NTRK like family member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:54,950,669...54,955,768
Ensembl chr11:54,950,676...54,955,949 		JBrowse link
G SLITRK2 SLIT and NTRK like family member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:118,826,531...118,837,134
Ensembl chr  X:118,830,086...118,834,307 		JBrowse link
G SLITRK3 SLIT and NTRK like family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:104,443,610...104,461,850
Ensembl chr13:104,449,973...104,461,119 		JBrowse link
G SLITRK5 SLIT and NTRK like family member 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:57,792,576...57,800,852
Ensembl chr11:57,792,665...57,800,846 		JBrowse link
G SPARCL1 SPARC like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:131,386,804...131,431,427
Ensembl chr 8:131,386,973...131,431,200 		JBrowse link
G TENM3 teneurin transmembrane protein 3 involved_in ISO (PMID:35484136) SynGO PMID:35484136 NCBI chr15:41,818,190...44,401,747
Ensembl chr15:43,540,375...44,399,711 		JBrowse link
G TENM4 teneurin transmembrane protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:13,040,615...13,826,957
Ensembl chr 9:13,045,196...13,820,420 		JBrowse link
regulation of synaptic membrane adhesion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC100155738 protocadherin-8 involved_in ISO PMID:17988630 SynGO PMID:17988630 RGD:13702360 NCBI chr11:26,127,398...26,133,481
Ensembl chr11:26,127,401...26,132,123 		JBrowse link
G LRFN3 leucine rich repeat and fibronectin type III domain containing 3 involved_in ISO PMID:27480238 SynGO PMID:27480238 RGD:13702184 NCBI chr 6:45,343,846...45,352,779
Ensembl chr 6:45,346,637...45,351,990 		JBrowse link
G MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 involved_in ISO PMID:23751499 SynGO PMID:23751499 RGD:13702234 NCBI chr 9:100,846,693...102,171,199
Ensembl chr 9:100,847,013...102,170,004 		JBrowse link
G MAPK14 mitogen-activated protein kinase 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:31,791,398...31,861,544
Ensembl chr 7:31,790,877...31,862,031 		JBrowse link
G MDGA1 MAM domain containing glycosylphosphatidylinositol anchor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:33,205,736...33,269,213
Ensembl chr 7:33,210,158...33,269,130 		JBrowse link
G MDGA2 MAM domain containing glycosylphosphatidylinositol anchor 2 involved_in ISO (PMID:27608760) SynGO PMID:27608760 NCBI chr 1:176,770,045...177,595,012
Ensembl chr 1:176,770,071...177,593,876 		JBrowse link
G TAOK2 TAO kinase 2 involved_in ISO PMID:17988630 SynGO PMID:17988630 RGD:13702360 NCBI chr 3:18,178,347...18,198,092
Ensembl chr 3:18,177,737...18,198,085 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18944
    cellular process 18487
      cell adhesion 1429
        cell-cell adhesion 919
          cell-cell adhesion via plasma-membrane adhesion molecules 229
            synaptic membrane adhesion 45
              regulation of synaptic membrane adhesion 7
Path 2
Term Annotations click to browse term
  biological_process 18944
    cellular process 18487
      cellular component organization or biogenesis 7420
        cellular component organization 7214
          cell junction organization 956
            synapse organization 687
              synaptic membrane adhesion 45
                regulation of synaptic membrane adhesion 7
paths to the root