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ONTOLOGY REPORT - ANNOTATIONS

Term:synaptic membrane adhesion
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Accession:GO:0099560 term browser browse the term
Definition:The attachment of presynaptic membrane to postsynaptic membrane via adhesion molecules that are at least partially embedded in the plasma membrane.
Synonyms:exact_synonym: synapse adhesion between pre- and post-synapse

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synaptic membrane adhesion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CADM1 cell adhesion molecule 1 involved_in ISO (PMID:18003830) SynGO PMID:18003830 NCBI chr 1:106,539,262...106,876,397
Ensembl chr 1:106,539,136...106,606,637 		JBrowse link
G CADM2 cell adhesion molecule 2 involved_in ISO PMID:18003830 SynGO PMID:18003830 RGD:2289094 NCBI chr22:90,879,537...91,994,144 JBrowse link
G CADM3 cell adhesion molecule 3 involved_in ISO PMID:18003830 SynGO PMID:18003830 RGD:2289094 NCBI chr20:4,746,751...4,777,321
Ensembl chr20:4,747,800...4,777,298 		JBrowse link
G CADM4 cell adhesion molecule 4 involved_in ISO PMID:18003830 SynGO PMID:18003830 RGD:2289094 NCBI chr 6:37,143,477...37,161,524
Ensembl chr 6:37,140,676...37,161,524 		JBrowse link
G CDH6 cadherin 6 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 4:30,457,589...30,594,066
Ensembl chr 4:30,457,718...30,592,105 		JBrowse link
G CDH9 cadherin 9 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 4:26,217,847...26,385,382
Ensembl chr 4:26,219,627...26,260,753 		JBrowse link
G EFNA5 ephrin A5 involved_in ISO (PMID:22275477) SynGO PMID:22275477 NCBI chr23:10,823,243...11,115,175
Ensembl chr23:10,823,261...10,873,666 		JBrowse link
G ELFN1 extracellular leucine rich repeat and fibronectin type III domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr28:19,841,125...19,843,721
Ensembl chr28:19,841,218...19,843,704 		JBrowse link
G ELFN2 extracellular leucine rich repeat and fibronectin type III domain containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:20,074,895...20,135,266
Ensembl chr19:20,079,971...20,082,433 		JBrowse link
G EPHA3 EPH receptor A3 involved_in ISO (PMID:22275477) SynGO PMID:22275477 NCBI chr22:87,480,220...87,840,628
Ensembl chr22:87,480,126...87,838,512 		JBrowse link
G FLRT3 fibronectin leucine rich transmembrane protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:43,252,181...43,267,981
Ensembl chr 2:43,255,347...43,257,296 		JBrowse link
G GPC4 glypican 4 involved_in IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chr  X:108,451,082...108,570,244
Ensembl chr  X:108,450,536...108,570,214 		JBrowse link
G IGSF9B immunoglobulin superfamily member 9B involved_in ISO (PMID:23751499) SynGO PMID:23751499 NCBI chr 1:124,969,228...125,021,334
Ensembl chr 1:124,974,027...125,021,200 		JBrowse link
G IL1RAP interleukin 1 receptor accessory protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:84,728,594...84,876,098
Ensembl chr15:84,728,517...84,866,263 		JBrowse link
G IL1RAPL1 interleukin 1 receptor accessory protein like 1 involved_in ISO (PMID:21940441) BHF-UCL PMID:21940441 NCBI chr  X:27,014,769...28,388,176 JBrowse link
G ITGA3 integrin subunit alpha 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:43,248,341...43,282,045
Ensembl chr16:43,250,435...43,281,670 		JBrowse link
G LOC103215064 cadherin-10 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 4:23,828,202...23,994,019
Ensembl chr 4:23,828,262...23,994,076 		JBrowse link
G LOC119623315 leucine-rich repeat-containing protein 4B-like involved_in IEA TreeGrafter GO_REF:0000118
G LRFN3 leucine rich repeat and fibronectin type III domain containing 3 involved_in ISO PMID:18227064 SynGO PMID:18227064 RGD:13702403 NCBI chr 6:30,850,915...30,860,452
Ensembl chr 6:30,854,451...30,862,658 		JBrowse link
G LRFN4 leucine rich repeat and fibronectin type III domain containing 4 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:7,406,502...7,409,707
Ensembl chr 1:7,402,779...7,409,959 		JBrowse link
G LRFN5 leucine rich repeat and fibronectin type III domain containing 5 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr24:18,421,057...18,712,096
Ensembl chr24:18,568,568...18,712,609 		JBrowse link
G LRRC4 leucine rich repeat containing 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr21:96,839,504...96,843,811
Ensembl chr21:96,841,337...96,843,298 		JBrowse link
G LRRC4B leucine rich repeat containing 4B involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:43,576,143...43,627,921 JBrowse link
G LRRC4C leucine rich repeat containing 4C involved_in IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:25,025,991...25,219,179
Ensembl chr 1:25,210,154...25,212,076 		JBrowse link
G NLGN1 neuroligin 1 involved_in ISO (PMID:12796785)
(PMID:12796785), (PMID:26771491)		 SynGO
SynGO-UCL		 PMID:12796785 PMID:26771491 NCBI chr15:15,129,976...16,017,107 JBrowse link
G NLGN1 neuroligin 1 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr15:15,131,866...15,141,276 JBrowse link
G NRG1 neuregulin 1 involved_in ISO (PMID:10686589) SynGO PMID:10686589 NCBI chr 8:29,745,984...30,862,140
Ensembl chr 8:30,635,803...30,856,487 		JBrowse link
G NRXN1 neurexin 1 involved_in ISO (PMID:12796785)
(PMID:12796785), (PMID:26771491)		 SynGO
SynGO-UCL		 PMID:12796785 PMID:26771491 NCBI chr14:56,051,849...57,202,334 JBrowse link
G NTNG1 netrin G1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:26,110,472...26,453,603
Ensembl chr20:26,112,017...26,275,352 		JBrowse link
G NTNG2 netrin G2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:5,897,613...5,978,129
Ensembl chr12:5,899,459...5,972,660 		JBrowse link
G PCDH17 protocadherin 17 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:35,423,998...35,518,776
Ensembl chr 3:35,426,230...35,519,023 		JBrowse link
G PTPRD protein tyrosine phosphatase receptor type D involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:70,160,253...71,237,292
Ensembl chr12:70,693,214...71,239,437 		JBrowse link
G PTPRF protein tyrosine phosphatase receptor type F involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:89,192,426...89,284,989
Ensembl chr20:89,191,660...89,284,970 		JBrowse link
G PTPRS protein tyrosine phosphatase receptor type S involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:4,880,942...5,019,654
Ensembl chr 6:4,882,223...4,964,919 		JBrowse link
G SLITRK1 SLIT and NTRK like family member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:62,912,035...62,917,774
Ensembl chr 3:62,914,244...62,916,331 		JBrowse link
G SLITRK2 SLIT and NTRK like family member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:120,640,216...120,649,434
Ensembl chr  X:120,646,022...120,648,559 		JBrowse link
G SLITRK3 SLIT and NTRK like family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:24,361,523...24,374,865
Ensembl chr15:24,367,287...24,370,226 		JBrowse link
G SLITRK5 SLIT and NTRK like family member 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:66,566,718...66,574,096
Ensembl chr 3:66,569,866...66,572,742 		JBrowse link
G SPARCL1 SPARC like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:35,858,402...35,914,776
Ensembl chr 7:35,857,559...35,915,115 		JBrowse link
G TENM3 teneurin transmembrane protein 3 involved_in ISO (PMID:35484136) SynGO PMID:35484136 NCBI chr 7:127,231,840...128,792,832
Ensembl chr 7:128,598,835...128,795,211 		JBrowse link
G TENM4 teneurin transmembrane protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:69,864,570...70,450,485
Ensembl chr 1:69,869,359...70,110,710 		JBrowse link
regulation of synaptic membrane adhesion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LRFN3 leucine rich repeat and fibronectin type III domain containing 3 involved_in ISO PMID:27480238 SynGO PMID:27480238 RGD:13702184 NCBI chr 6:30,850,915...30,860,452
Ensembl chr 6:30,854,451...30,862,658 		JBrowse link
G MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 involved_in ISO PMID:23751499 SynGO PMID:23751499 RGD:13702234 NCBI chr21:69,460,345...70,916,684 JBrowse link
G MAPK14 mitogen-activated protein kinase 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:36,012,164...36,095,542
Ensembl chr17:36,014,454...36,095,138 		JBrowse link
G MDGA1 MAM domain containing glycosylphosphatidylinositol anchor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:34,443,453...34,506,531
Ensembl chr17:34,474,974...34,501,685 		JBrowse link
G MDGA2 MAM domain containing glycosylphosphatidylinositol anchor 2 involved_in ISO (PMID:27608760) SynGO PMID:27608760 NCBI chr24:23,853,710...24,705,276
Ensembl chr24:23,856,533...24,318,531 		JBrowse link
G PCDH8 protocadherin 8 involved_in ISO PMID:17988630 SynGO PMID:17988630 RGD:13702360 NCBI chr 3:30,602,449...30,610,656
Ensembl chr 3:30,602,321...30,606,926 		JBrowse link
G TAOK2 TAO kinase 2 involved_in ISO PMID:17988630 SynGO PMID:17988630 RGD:13702360 NCBI chr 5:26,669,687...26,688,418
Ensembl chr 5:26,669,702...26,688,389 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19829
    cellular process 19347
      cell adhesion 1378
        cell-cell adhesion 910
          cell-cell adhesion via plasma-membrane adhesion molecules 221
            synaptic membrane adhesion 47
              regulation of synaptic membrane adhesion 7
Path 2
Term Annotations click to browse term
  biological_process 19829
    cellular process 19347
      cellular component organization or biogenesis 8804
        cellular component organization 8578
          cell junction organization 939
            synapse organization 676
              synaptic membrane adhesion 47
                regulation of synaptic membrane adhesion 7
paths to the root