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ONTOLOGY REPORT - ANNOTATIONS

Term:synaptic membrane adhesion
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Accession:GO:0099560 term browser browse the term
Definition:The attachment of presynaptic membrane to postsynaptic membrane via adhesion molecules that are at least partially embedded in the plasma membrane.
Synonyms:exact_synonym: synapse adhesion between pre- and post-synapse


show annotations for term's descendants           Sort by:
synaptic membrane adhesion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CADM1 cell adhesion molecule 1 involved_in ISO (PMID:18003830) SynGO PMID:18003830 NCBI chr 5:17,865,317...18,190,855
Ensembl chr 5:17,864,453...18,194,694 		JBrowse link
G CADM2 cell adhesion molecule 2 involved_in ISO PMID:18003830 SynGO PMID:18003830 RGD:2289094 NCBI chr31:1,872,005...2,931,942
Ensembl chr31:1,879,585...2,931,452 		JBrowse link
G CADM3 cell adhesion molecule 3 involved_in ISO PMID:18003830 SynGO PMID:18003830 RGD:2289094 NCBI chr38:22,765,479...22,782,162
Ensembl chr38:22,766,698...22,797,072 		JBrowse link
G CADM4 cell adhesion molecule 4 involved_in ISO PMID:18003830 SynGO PMID:18003830 RGD:2289094 NCBI chr 1:111,507,543...111,512,733
Ensembl chr 1:111,507,543...111,513,308 		JBrowse link
G CDH10 cadherin 10 involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 4:80,927,251...81,101,053
Ensembl chr 4:80,927,134...81,100,876 		JBrowse link
G CDH6 cadherin 6 involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 4:75,950,999...75,999,250
Ensembl chr 4:75,950,999...75,961,779 		JBrowse link
G CDH9 cadherin 9 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 4:79,153,276...79,284,514
Ensembl chr 4:79,153,198...79,282,959 		JBrowse link
G EFNA5 ephrin A5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:4,272,138...4,546,527
Ensembl chr 3:4,272,518...4,542,049 		JBrowse link
G ELFN1 extracellular leucine rich repeat and fibronectin type III domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:15,275,822...15,338,878 JBrowse link
G ELFN2 extracellular leucine rich repeat and fibronectin type III domain containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:27,185,104...27,191,461
Ensembl chr10:27,185,504...27,187,594 		JBrowse link
G EPHA3 EPH receptor A3 involved_in ISO (PMID:22275477) SynGO PMID:22275477 NCBI chr33:770,234...1,092,063
Ensembl chr33:769,423...1,115,986 		JBrowse link
G FLRT3 fibronectin leucine rich transmembrane protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:8,354,151...8,367,601
Ensembl chr24:8,364,115...8,366,064 		JBrowse link
G GPC4 glypican 4 involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr  X:104,098,316...104,215,883
Ensembl chr  X:104,100,571...104,216,103 		JBrowse link
G HSD17B11 hydroxysteroid 17-beta dehydrogenase 11 involved_in ISO (PMID:26771491) SynGO PMID:26771491 NCBI chr32:10,821,332...10,854,541
Ensembl chr32:10,794,617...10,854,193 		JBrowse link
G IGSF9B immunoglobulin superfamily member 9B involved_in ISO (PMID:23751499) SynGO PMID:23751499 NCBI chr 5:1,273,897...1,330,449
Ensembl chr 5:1,273,444...1,320,283 		JBrowse link
G IL1RAP interleukin 1 receptor accessory protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr34:22,547,422...22,628,628
Ensembl chr34:22,546,899...22,623,544 		JBrowse link
G IL1RAPL1 interleukin 1 receptor accessory protein like 1 involved_in ISO (PMID:21940441) BHF-UCL PMID:21940441 NCBI chr  X:23,747,689...25,105,606
Ensembl chr  X:23,943,871...25,099,377 		JBrowse link
G ITGA3 integrin subunit alpha 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:26,065,792...26,095,649
Ensembl chr 9:26,062,393...26,094,422 		JBrowse link
G LRFN3 leucine rich repeat and fibronectin type III domain containing 3 involved_in ISO PMID:18227064 SynGO PMID:18227064 RGD:13702403 NCBI chr 1:116,727,092...116,734,844 JBrowse link
G LRFN4 leucine rich repeat and fibronectin type III domain containing 4 involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr18:50,495,971...50,499,062
Ensembl chr18:50,495,971...50,499,068 		JBrowse link
G LRFN5 leucine rich repeat and fibronectin type III domain containing 5 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:19,365,786...19,602,551
Ensembl chr 8:19,367,570...19,602,185 		JBrowse link
G LRRC4 leucine rich repeat containing 4 involved_in IBA GO_Central GO_REF:0000033 NCBI chr14:8,324,244...8,327,259
Ensembl chr14:8,324,788...8,326,740 		JBrowse link
G LRRC4B leucine rich repeat containing 4B involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:106,166,536...106,229,083
Ensembl chr 1:106,190,248...106,229,089 		JBrowse link
G LRRC4C leucine rich repeat containing 4C involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:27,687,197...28,851,487
Ensembl chr18:28,841,164...28,843,083 		JBrowse link
G NLGN1 neuroligin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr34:37,397,772...38,203,634
Ensembl chr34:37,572,629...38,203,177 		JBrowse link
G NRG1 neuregulin 1 involved_in ISO (PMID:10686589) SynGO PMID:10686589 NCBI chr16:31,697,958...32,771,888
Ensembl chr16:31,706,851...32,771,932 		JBrowse link
G NRXN1 neurexin 1 involved_in ISO (PMID:12796785)
(PMID:12796785), (PMID:26771491)		 SynGO
SynGO-UCL		 PMID:12796785 PMID:26771491 NCBI chr10:51,555,660...52,666,774
Ensembl chr10:51,558,452...52,667,569 		JBrowse link
G NTNG1 netrin G1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:44,091,368...44,407,118
Ensembl chr 6:44,092,043...44,403,799 		JBrowse link
G NTNG2 netrin G2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:51,994,593...52,004,620 JBrowse link
G PCDH17 protocadherin 17 involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:13,865,138...13,962,110
Ensembl chr22:13,865,900...13,958,405 		JBrowse link
G PTPRD protein tyrosine phosphatase receptor type D involved_in IBA
IEA		 GO_Central
Ensembl		 GO_REF:0000033 GO_REF:0000107 NCBI chr11:29,100,913...31,278,495
Ensembl chr11:29,104,448...29,501,600 		JBrowse link
G PTPRF protein tyrosine phosphatase receptor type F involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr15:16,590,908...16,666,673
Ensembl chr15:16,591,308...16,666,673 		JBrowse link
G PTPRS protein tyrosine phosphatase receptor type S involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:54,575,853...54,672,141
Ensembl chr20:54,575,895...54,672,068 		JBrowse link
G SLITRK1 SLIT and NTRK like family member 1 involved_in ISO (PMID:23345436) SynGO PMID:23345436 NCBI chr22:36,325,548...36,329,784
Ensembl chr22:36,326,751...36,328,841 		JBrowse link
G SLITRK2 SLIT and NTRK like family member 2 involved_in ISO (PMID:23345436) SynGO PMID:23345436 NCBI chr  X:114,576,526...114,584,471
Ensembl chr  X:114,581,070...114,583,607 		JBrowse link
G SLITRK3 SLIT and NTRK like family member 3 involved_in ISO (PMID:23345436) SynGO PMID:23345436 NCBI chr34:30,447,606...30,456,444
Ensembl chr34:30,447,659...30,450,598 		JBrowse link
G SLITRK5 SLIT and NTRK like family member 5 involved_in ISO (PMID:23345436) SynGO PMID:23345436 NCBI chr22:39,381,201...39,390,728
Ensembl chr22:39,384,666...39,387,542 		JBrowse link
G SPARCL1 SPARC like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr32:10,900,072...10,944,392
Ensembl chr32:10,900,283...10,944,449 		JBrowse link
G TENM3 teneurin transmembrane protein 3 involved_in ISO (PMID:35484136) SynGO PMID:35484136 NCBI chr16:47,440,673...47,883,311
Ensembl chr16:47,441,348...48,044,322
Ensembl chr16:47,441,348...48,044,322 		JBrowse link
G TENM4 teneurin transmembrane protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:17,819,846...20,234,096
Ensembl chr21:19,732,991...20,230,305 		JBrowse link
regulation of synaptic membrane adhesion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LRFN3 leucine rich repeat and fibronectin type III domain containing 3 involved_in ISO PMID:27480238 SynGO PMID:27480238 RGD:13702184 NCBI chr 1:116,727,092...116,734,844 JBrowse link
G MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 involved_in ISO PMID:23751499 SynGO PMID:23751499 RGD:13702234 NCBI chr18:17,973,058...19,098,785
Ensembl chr18:17,918,928...18,930,059 		JBrowse link
G MAPK14 mitogen-activated protein kinase 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:5,145,647...5,221,558
Ensembl chr12:5,146,037...5,220,603 		JBrowse link
G MDGA1 MAM domain containing glycosylphosphatidylinositol anchor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:6,655,586...6,716,619
Ensembl chr12:6,659,910...6,686,760 		JBrowse link
G MDGA2 MAM domain containing glycosylphosphatidylinositol anchor 2 involved_in ISO (PMID:27608760) SynGO PMID:27608760 NCBI chr 8:23,827,284...24,608,003
Ensembl chr 8:23,832,475...24,607,866 		JBrowse link
G PCDH8 protocadherin 8 involved_in ISO PMID:17988630 SynGO PMID:17988630 RGD:13702360 NCBI chr22:9,860,590...9,865,298
Ensembl chr22:9,860,827...9,865,412 		JBrowse link
G TAOK2 TAO kinase 2 involved_in ISO PMID:17988630 SynGO PMID:17988630 RGD:13702360 NCBI chr 6:18,014,685...18,029,188
Ensembl chr 6:18,000,138...18,029,185 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 22141
    cellular process 21672
      cell adhesion 1428
        cell-cell adhesion 927
          cell-cell adhesion via plasma-membrane adhesion molecules 234
            synaptic membrane adhesion 46
              regulation of synaptic membrane adhesion 7
Path 2
Term Annotations click to browse term
  biological_process 22141
    cellular process 21672
      cellular component organization or biogenesis 10063
        cellular component organization 9831
          cell junction organization 970
            synapse organization 699
              synaptic membrane adhesion 46
                regulation of synaptic membrane adhesion 7
paths to the root