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ONTOLOGY REPORT - ANNOTATIONS

Term:cluster of actin-based cell projections
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Accession:GO:0098862 term browser browse the term
Definition:A cell part consisting of multiple, closely packed actin-based cell projections.


show annotations for term's descendants           Sort by:
cluster of actin-based cell projections term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Espn espin located_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr 5:167,909,271...167,943,168
Ensembl chr 5:167,909,271...167,942,984 		JBrowse link
G Myo1b myosin Ib located_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr 9:57,182,059...57,344,335
Ensembl chr 9:57,181,987...57,344,328 		JBrowse link
G Myo1h myosin IH located_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr12:47,908,716...47,916,668
Ensembl chr12:47,908,959...47,984,623 		JBrowse link
brush border term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actb actin, beta located_in IEA
ISO 		GO_REF:0000107
(PMID:33129760) 		Ensembl
RGD		 PMID:33129760 GO_REF:0000107 NCBI chr12:16,776,664...16,779,634
Ensembl chr12:16,776,661...16,780,242 		JBrowse link
G Actn1 actinin, alpha 1 located_in IEA
ISO 		GO_REF:0000107
(PMID:22114352) 		Ensembl
RGD		 PMID:22114352 GO_REF:0000107 NCBI chr 6:104,731,485...104,826,312
Ensembl chr 6:104,731,485...104,826,172 		JBrowse link
G Actn3 actinin alpha 3 located_in ISO
IEA 		(PMID:22114352)
GO_REF:0000107 		RGD
Ensembl		 PMID:22114352 GO_REF:0000107 NCBI chr 1:211,588,473...211,604,401
Ensembl chr 1:211,588,474...211,604,401 		JBrowse link
G Actr3 actin related protein 3 located_in IEA
ISO 		GO_REF:0000107
(PMID:22114352) 		Ensembl
RGD		 PMID:22114352 GO_REF:0000107 NCBI chr13:39,353,413...39,396,509
Ensembl chr13:39,353,079...39,396,711 		JBrowse link
G Add3 adducin 3 located_in ISO
IEA 		(PMID:22114352)
GO_REF:0000107 		RGD
Ensembl		 PMID:22114352 GO_REF:0000107 NCBI chr 1:262,152,722...262,260,504
Ensembl chr 1:262,154,996...262,260,504 		JBrowse link
G Alpp alkaline phosphatase, placental located_in ISO (PMID:22114352) RGD PMID:22114352 NCBI chr 9:95,213,763...95,216,509
Ensembl chr 9:95,213,374...95,219,451 		JBrowse link
G Anks4b ankyrin repeat and sterile alpha motif domain containing 4B located_in ISO
IEA 		(PMID:26812018)
GO_REF:0000107 		RGD
Ensembl		 PMID:26812018 GO_REF:0000107 NCBI chr 1:183,934,528...183,989,127
Ensembl chr 1:183,978,769...183,989,122 		JBrowse link
G Aqp1 aquaporin 1 located_in ISO
IEA
IDA 		(PMID:16133142), (PMID:16814974)
GO_REF:0000117
GO_REF:0000107 		RGD
UniProt
Ensembl		 PMID:16133142 PMID:16814974 PMID:16133142 GO_REF:0000107 GO_REF:0000117, RGD:8553876 NCBI chr 4:85,812,784...85,824,964
Ensembl chr 4:85,812,784...85,830,504 		JBrowse link
G Atp6v0a4 ATPase H+ transporting V0 subunit a4 located_in ISO
IEA 		(PMID:11495928)
GO_REF:0000107 		RGD
Ensembl		 PMID:11495928 GO_REF:0000107 NCBI chr 4:67,727,145...67,809,092
Ensembl chr 4:67,727,145...67,809,092 		JBrowse link
G Capza1 capping actin protein of muscle Z-line subunit alpha 1 located_in ISO (PMID:22114352) RGD PMID:22114352 NCBI chr 2:195,008,035...195,053,100
Ensembl chr 2:195,008,039...195,053,100 		JBrowse link
G Capza2 capping actin protein of muscle Z-line subunit alpha 2 located_in ISO (PMID:22114352) RGD PMID:22114352 NCBI chr 4:46,944,040...46,979,930
Ensembl chr 4:46,895,701...46,979,938 		JBrowse link
G Capzb capping actin protein of muscle Z-line subunit beta located_in ISO (PMID:22114352) RGD PMID:22114352 NCBI chr 5:156,718,619...156,818,623
Ensembl chr 5:156,650,432...156,818,619 		JBrowse link
G Cdhr2 cadherin-related family member 2 located_in ISO
IEA 		(PMID:21330445)
GO_REF:0000107 		RGD
Ensembl		 PMID:21330445 GO_REF:0000107 NCBI chr17:9,881,979...9,917,698
Ensembl chr17:9,881,979...9,917,698 		JBrowse link
G Cdhr5 cadherin-related family member 5 located_in ISO (PMID:21330445) RGD PMID:21330445 NCBI chr 1:205,802,686...205,811,184
Ensembl chr 1:205,802,686...205,811,093 		JBrowse link
G Cgn cingulin located_in ISO (PMID:22114352) RGD PMID:22114352 NCBI chr 2:184,997,425...185,024,785
Ensembl chr 2:184,997,425...185,023,635 		JBrowse link
G Coro2a coronin 2A located_in ISO
IEA 		(PMID:22114352)
GO_REF:0000107 		RGD
Ensembl		 PMID:22114352 GO_REF:0000107 NCBI chr 5:65,623,820...65,677,483
Ensembl chr 5:65,623,823...65,654,602 		JBrowse link
G Cubn cubilin located_in IEA
ISO 		GO_REF:0000107
(PMID:12815097) 		Ensembl
RGD		 PMID:12815097 GO_REF:0000107 NCBI chr17:81,293,619...81,501,694
Ensembl chr17:81,293,619...81,501,694 		JBrowse link
G Dab1 DAB adaptor protein 1 IDA RGD PMID:19946030 RGD:2317766 NCBI chr 5:123,621,510...124,742,585
Ensembl chr 5:124,369,415...124,742,584 		JBrowse link
G Dcxr dicarbonyl and L-xylulose reductase located_in ISO (PMID:11882650) RGD PMID:11882650 NCBI chr10:106,504,730...106,506,619 JBrowse link
G Ddr1 discoidin domain receptor tyrosine kinase 1 IDA RGD PMID:23195037 RGD:13508622 NCBI chr20:3,047,269...3,069,277
Ensembl chr20:3,050,375...3,069,276 		JBrowse link
G Diaph1 diaphanous-related formin 1 located_in ISO (PMID:22114352) RGD PMID:22114352 NCBI chr18:29,920,889...30,020,280
Ensembl chr18:29,920,889...30,020,280 		JBrowse link
G Dnm1l dynamin 1-like located_in ISO
IEA 		(PMID:22114352)
GO_REF:0000107 		RGD
Ensembl		 PMID:22114352 GO_REF:0000107 NCBI chr11:98,084,049...98,135,663
Ensembl chr11:98,085,397...98,137,420 		JBrowse link
G Enpep glutamyl aminopeptidase located_in IEA
ISO 		GO_REF:0000107
GO_REF:0000117
(PMID:16286663) 		Ensembl
UniProt
RGD		 PMID:16286663 GO_REF:0000107 GO_REF:0000117 NCBI chr 2:220,456,258...220,526,218
Ensembl chr 2:220,456,278...220,526,218 		JBrowse link
G Eps8 EGFR pathway substrate 8, signaling adaptor located_in IEA
ISO 		GO_REF:0000107
(PMID:22114352) 		Ensembl
RGD		 PMID:22114352 GO_REF:0000107 NCBI chr 4:172,119,497...172,291,670
Ensembl chr 4:172,119,497...172,218,160 		JBrowse link
G Espn espin located_in IDA
ISO 		PMID:9763424
(PMID:22114352) 		RGD PMID:22114352 PMID:9763424 RGD:632659 NCBI chr 5:167,909,271...167,943,168
Ensembl chr 5:167,909,271...167,942,984 		JBrowse link
G Ezr ezrin located_in IEA
ISO 		GO_REF:0000107
(PMID:22114352), (PMID:24284068) 		Ensembl
RGD		 PMID:22114352 PMID:24284068 GO_REF:0000107 NCBI chr 1:49,373,033...49,416,573
Ensembl chr 1:49,373,035...49,416,573 		JBrowse link
G Flii FLII, actin remodeling protein located_in ISO
IEA 		(PMID:22114352)
GO_REF:0000107 		RGD
Ensembl		 PMID:22114352 GO_REF:0000107 NCBI chr10:45,893,566...45,907,547
Ensembl chr10:45,893,572...45,907,491 		JBrowse link
G Flna filamin A located_in ISO (PMID:22114352) RGD PMID:22114352 NCBI chr  X:157,159,051...157,185,559
Ensembl chr  X:157,159,051...157,182,343 		JBrowse link
G Flnb filamin B located_in ISO
IEA 		(PMID:22114352)
GO_REF:0000107 		RGD
Ensembl		 PMID:22114352 GO_REF:0000107 NCBI chr15:19,392,212...19,525,278
Ensembl chr15:19,392,216...19,525,209 		JBrowse link
G Gipc1 GIPC PDZ domain containing family, member 1 IDA RGD PMID:11912251 RGD:2303813 NCBI chr19:41,380,125...41,392,078
Ensembl chr19:41,380,125...41,391,725 		JBrowse link
G Havcr1 hepatitis A virus cellular receptor 1 located_in ISO (PMID:29402223) RGD PMID:29402223 NCBI chr10:31,619,914...31,652,955
Ensembl chr10:31,619,897...31,653,268 		JBrowse link
G Itpr3 inositol 1,4,5-trisphosphate receptor, type 3 located_in IDA PMID:8288584 BHF-UCL PMID:8288584 RGD:8553539 NCBI chr20:5,138,553...5,204,189
Ensembl chr20:5,118,834...5,204,184 		JBrowse link
G Lct lactase IDA RGD PMID:12023280 RGD:1299293 NCBI chr13:42,334,347...42,376,872
Ensembl chr13:42,334,347...42,376,872 		JBrowse link
G Lctl lactase-like located_in ISO
IEA 		(PMID:22114352)
GO_REF:0000107 		RGD
Ensembl		 PMID:22114352 GO_REF:0000107 NCBI chr 8:73,506,096...73,534,668
Ensembl chr 8:73,513,634...73,534,668 		JBrowse link
G Lima1 LIM domain and actin binding 1 located_in ISO (PMID:22114352) RGD PMID:22114352 NCBI chr 7:132,780,556...132,880,343
Ensembl chr 7:132,780,556...132,880,386 		JBrowse link
G Lrp2 LDL receptor related protein 2 located_in IDA
IEA
ISO 		GO_REF:0000107
(PMID:12815097) 		Ensembl
RGD		 PMID:12815097 PMID:11912251 GO_REF:0000107, RGD:2303813 NCBI chr 3:74,597,148...74,754,535
Ensembl chr 3:74,597,148...74,754,535 		JBrowse link
G Mme membrane metallo-endopeptidase located_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:22272689) 		UniProt
Ensembl
RGD		 PMID:22272689 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:149,806,826...149,957,381
Ensembl chr 2:149,872,291...149,953,463 		JBrowse link
G Myh10 myosin heavy chain 10 located_in ISO
IEA 		(PMID:22114352)
GO_REF:0000117
GO_REF:0000107 		RGD
UniProt
Ensembl		 PMID:22114352 GO_REF:0000107 GO_REF:0000117 NCBI chr10:53,891,955...54,024,032
Ensembl chr10:53,893,166...54,024,036 		JBrowse link
G Myh11 myosin heavy chain 11 located_in ISO
IEA 		(PMID:22114352)
GO_REF:0000117 		RGD
UniProt		 PMID:22114352 GO_REF:0000117 NCBI chr10:1,250,554...1,345,681
Ensembl chr10:1,263,194...1,345,678 		JBrowse link
G Myh14 myosin heavy chain 14 located_in ISO
IEA 		(PMID:22114352)
GO_REF:0000107 		RGD
Ensembl		 PMID:22114352 GO_REF:0000107 NCBI chr 1:104,232,778...104,295,369
Ensembl chr 1:104,232,778...104,323,404 		JBrowse link
G Myh9 myosin, heavy chain 9 located_in IDA
IEA
ISO 		GO_REF:0000117
(PMID:22114352)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:22114352 PMID:22357915 GO_REF:0000107 GO_REF:0000117, RGD:7243154 NCBI chr 7:111,224,291...111,304,963
Ensembl chr 7:111,224,291...111,304,963 		JBrowse link
G Myl12a myosin light chain 12A located_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 9:118,338,592...118,346,277
Ensembl chr 9:118,338,604...118,342,634 		JBrowse link
G Myl12b myosin light chain 12B located_in ISO (PMID:22114352) RGD PMID:22114352 NCBI chr 9:118,320,479...118,334,810
Ensembl chr 9:118,320,489...118,324,418 		JBrowse link
G Myl6 myosin light chain 6 located_in ISO (PMID:22114352) RGD PMID:22114352 NCBI chr 7:1,495,301...1,498,512
Ensembl chr 7:1,495,747...1,498,344 		JBrowse link
G Myo15b myosin XVB located_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr10:101,587,672...101,625,092
Ensembl chr10:101,587,672...101,625,092 		JBrowse link
G Myo18a myosin XVIIIa located_in ISO (PMID:22114352) RGD PMID:22114352 NCBI chr10:63,152,303...63,253,543
Ensembl chr10:63,152,103...63,253,543 		JBrowse link
G Myo1a myosin IA located_in
is_active_in 		NAS
IEA
ISO
IBA
ISS
IDA 		GO_REF:0000117
(PMID:15758024), (PMID:20089841), (PMID:22114352)
GO_REF:0000033
GO_REF:0000107
(PMID:9858156)
GO_REF:0000024 		UniProt
RGD
GO_Central
Ensembl		 PMID:9858156 PMID:15758024 PMID:20089841 PMID:22114352 PMID:7779104 More... GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000117, RGD:69898, RGD:1581729 NCBI chr 7:65,424,206...65,443,227
Ensembl chr 7:65,428,258...65,443,213 		JBrowse link
G Myo1b myosin Ib located_in
is_active_in 		IDA
IEA
ISO
IBA 		GO_REF:0000117
(PMID:22114352)
GO_REF:0000033 		UniProt
RGD
GO_Central		 PMID:22114352 PMID:11546671 GO_REF:0000033 GO_REF:0000117, RGD:628448 NCBI chr 9:57,182,059...57,344,335
Ensembl chr 9:57,181,987...57,344,328 		JBrowse link
G Myo1c myosin 1C located_in IEA
ISO 		GO_REF:0000107
(PMID:15758024), (PMID:20089841), (PMID:22114352) 		Ensembl
RGD		 PMID:15758024 PMID:20089841 PMID:22114352 GO_REF:0000107 NCBI chr10:60,996,642...61,019,022
Ensembl chr10:60,996,638...61,019,022 		JBrowse link
G Myo1d myosin ID located_in IDA
IEA
ISO 		PMID:20089841
GO_REF:0000117
(PMID:21330445), (PMID:22114352)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:21330445 PMID:22114352 PMID:20089841 GO_REF:0000107 GO_REF:0000117, RGD:10047169 NCBI chr10:65,986,900...66,263,538
Ensembl chr10:65,975,122...66,263,958 		JBrowse link
G Myo1e myosin IE located_in ISO (PMID:20089841), (PMID:22114352) RGD PMID:20089841 PMID:22114352 NCBI chr 8:79,768,828...79,961,048
Ensembl chr 8:79,753,596...79,961,045 		JBrowse link
G Myo5b myosin Vb located_in ISO (PMID:22114352) RGD PMID:22114352 NCBI chr18:70,313,717...70,613,918
Ensembl chr18:70,311,990...70,613,918 		JBrowse link
G Myo6 myosin VI located_in ISO (PMID:22114352) RGD PMID:22114352 NCBI chr 8:89,967,351...90,122,219
Ensembl chr 8:89,967,377...90,122,215 		JBrowse link
G Myo7b myosin VIIb located_in ISO
IEA 		(PMID:24725409)
GO_REF:0000117
GO_REF:0000107
(PMID:22114352), (PMID:24725409) 		RGD
UniProt
Ensembl		 PMID:22114352 PMID:24725409 GO_REF:0000107 GO_REF:0000117 NCBI chr18:23,862,533...23,944,081
Ensembl chr18:23,862,533...23,944,049 		JBrowse link
G Nherf4 NHERF family PDZ scaffold protein 4 located_in ISO
IEA 		(PMID:19088451)
GO_REF:0000117 		RGD
UniProt		 PMID:19088451 GO_REF:0000117 NCBI chr 8:53,481,209...53,485,793
Ensembl chr 8:53,481,012...53,485,661 		JBrowse link
G Nppa natriuretic peptide A located_in IDA PMID:1372667 UniProt PMID:1372667 RGD:14929205 NCBI chr 5:163,712,184...163,713,493
Ensembl chr 5:163,712,184...163,713,493 		JBrowse link
G Pdzk1 PDZ domain containing 1 located_in ISO
IEA 		(PMID:9461128)
GO_REF:0000107 		RGD
Ensembl		 PMID:9461128 GO_REF:0000107 NCBI chr 2:187,064,995...187,096,348
Ensembl chr 2:187,065,013...187,096,806 		JBrowse link
G Plec plectin located_in ISO
IEA 		(PMID:22114352)
GO_REF:0000107 		RGD
Ensembl		 PMID:22114352 GO_REF:0000107 NCBI chr 7:109,768,447...109,829,798
Ensembl chr 7:109,768,447...109,828,089 		JBrowse link
G Pls1 plastin 1 located_in ISO
IEA 		(PMID:22114352)
GO_REF:0000107 		RGD
Ensembl		 PMID:22114352 GO_REF:0000107 NCBI chr 8:105,196,312...105,306,252
Ensembl chr 8:105,197,455...105,292,447 		JBrowse link
G Prkci protein kinase C, iota located_in ISO
IEA 		(PMID:33129760)
GO_REF:0000107 		RGD
Ensembl		 PMID:33129760 GO_REF:0000107 NCBI chr 2:114,250,398...114,310,784
Ensembl chr 2:114,250,398...114,310,784 		JBrowse link
G Prom1 prominin 1 located_in ISO (PMID:9356465) RGD PMID:9356465 NCBI chr14:71,202,303...71,307,008
Ensembl chr14:71,202,336...71,307,002 		JBrowse link
G Ralgds ral guanine nucleotide dissociation stimulator located_in ISO (PMID:22797597) RGD PMID:22797597 NCBI chr 3:32,237,644...32,278,045
Ensembl chr 3:32,237,786...32,278,045 		JBrowse link
G Rapgef4 Rap guanine nucleotide exchange factor 4 IDA RGD PMID:18495799 RGD:2314762 NCBI chr 3:77,217,024...77,509,933
Ensembl chr 3:77,217,039...77,509,978 		JBrowse link
G Rgs19 regulator of G-protein signaling 19 IDA RGD PMID:11912251 RGD:2303813 NCBI chr 3:189,182,041...189,190,494
Ensembl chr 3:189,182,383...189,190,736 		JBrowse link
G Scart1 scavenger receptor family member expressed on T-cells 1 located_in ISO (PMID:22795646) RGD PMID:22795646 NCBI chr 1:204,450,386...204,462,094
Ensembl chr 1:204,450,386...204,461,441 		JBrowse link
G Scin scinderin located_in ISO
IEA 		(PMID:22114352)
GO_REF:0000107 		RGD
Ensembl		 PMID:22114352 GO_REF:0000107 NCBI chr 6:62,836,641...62,915,287
Ensembl chr 6:62,836,641...62,915,287 		JBrowse link
G Si sucrase-isomaltase IDA RGD PMID:15138292 RGD:1581729 NCBI chr 2:159,804,568...159,884,902
Ensembl chr 2:159,804,568...159,883,934 		JBrowse link
G Slc15a1 solute carrier family 15 member 1 located_in IEA
ISO 		GO_REF:0000107
(PMID:22114352) 		Ensembl
RGD		 PMID:22114352 GO_REF:0000107 NCBI chr15:104,944,461...104,991,316
Ensembl chr15:104,944,463...104,989,369 		JBrowse link
G Slc23a1 solute carrier family 23 member 1 located_in IDA PMID:16673096 UniProt PMID:16673096 RGD:8554652 NCBI chr18:27,490,549...27,504,563
Ensembl chr18:27,490,374...27,504,702 		JBrowse link
G Slc2a2 solute carrier family 2 member 2 located_in
is_active_in 		IDA
ISO
IBA
IEA 		(PMID:15601832)
GO_REF:0000033
GO_REF:0000107 		RGD
GO_Central
Ensembl		 PMID:15601832 PMID:12095416 GO_REF:0000033 GO_REF:0000107, RGD:625552 NCBI chr 2:113,537,884...113,568,422
Ensembl chr 2:113,537,972...113,568,467 		JBrowse link
G Slc34a1 solute carrier family 34 member 1 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:9,224,010...9,238,983
Ensembl chr17:9,224,010...9,238,983 		JBrowse link
G Slc34a2 solute carrier family 34 member 2 located_in
is_active_in 		IEA
ISO
IBA 		GO_REF:0000107
(PMID:12773415)
GO_REF:0000033 		Ensembl
RGD
GO_Central		 PMID:12773415 GO_REF:0000033 GO_REF:0000107 NCBI chr14:62,123,313...62,153,020
Ensembl chr14:62,123,316...62,143,360 		JBrowse link
G Slc34a3 solute carrier family 34 member 3 is_active_in
located_in 		IBA
IEA
ISO 		GO_REF:0000033
GO_REF:0000107
(PMID:12690469) 		GO_Central
Ensembl
RGD		 PMID:12690469 GO_REF:0000033 GO_REF:0000107 NCBI chr 3:28,442,455...28,447,997
Ensembl chr 3:28,442,457...28,447,997 		JBrowse link
G Slc38a2 solute carrier family 38, member 2 IDA RGD PMID:20338592 RGD:9999218 NCBI chr 7:129,730,450...129,742,619
Ensembl chr 7:129,730,450...129,742,619 		JBrowse link
G Slc5a1 solute carrier family 5 member 1 located_in ISO (PMID:15601832) RGD PMID:15601832 NCBI chr14:81,778,495...81,843,084
Ensembl chr14:81,778,348...81,846,624 		JBrowse link
G Slc9a3 solute carrier family 9 member A3 IDA RGD PMID:11880335 RGD:737665 NCBI chr 1:30,953,215...30,996,209
Ensembl chr 1:30,953,216...30,996,002 		JBrowse link
G Snx5 sorting nexin 5 IDA RGD PMID:23195037 RGD:13508622 NCBI chr 3:152,075,258...152,094,508
Ensembl chr 3:152,075,258...152,094,877 		JBrowse link
G Soat2 sterol O-acyltransferase 2 located_in ISO
IEA 		(PMID:14615411)
GO_REF:0000107 		RGD
Ensembl		 PMID:14615411 GO_REF:0000107 NCBI chr 7:135,160,424...135,173,521
Ensembl chr 7:135,160,402...135,173,513 		JBrowse link
G Tpm3 tropomyosin 3 located_in IDA PMID:22114352 UniProt PMID:22114352 RGD:10047239 NCBI chr 2:177,812,534...177,842,661
Ensembl chr 2:177,814,883...177,842,660 		JBrowse link
G Ush1c USH1 protein network component harmonin located_in ISO
IEA 		(PMID:21330445), (PMID:24725409)
GO_REF:0000117
GO_REF:0000107
(PMID:22114352), (PMID:24725409) 		RGD
UniProt
Ensembl		 PMID:21330445 PMID:22114352 PMID:24725409 GO_REF:0000107 GO_REF:0000117 NCBI chr 1:105,831,719...105,880,082
Ensembl chr 1:105,831,723...105,880,082 		JBrowse link
G Vcl vinculin located_in ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr15:3,315,069...3,404,891
Ensembl chr15:3,315,069...3,405,163 		JBrowse link
G Vil1 villin 1 located_in ISO
IEA 		(PMID:22114352), (PMID:33129760)
GO_REF:0000107 		RGD
Ensembl		 PMID:22114352 PMID:33129760 GO_REF:0000107 NCBI chr 9:83,440,248...83,467,963
Ensembl chr 9:83,440,248...83,467,961 		JBrowse link
brush border membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb1a ATP binding cassette subfamily B member 1A IDA RGD PMID:26367854 RGD:11041116 NCBI chr 4:26,312,403...26,488,456
Ensembl chr 4:26,312,409...26,397,135 		JBrowse link
G Abcc2 ATP binding cassette subfamily C member 2 IDA RGD PMID:16899240 RGD:1598605 NCBI chr 1:252,613,875...252,672,459
Ensembl chr 1:252,614,017...252,673,471 		JBrowse link
G Abcg2 ATP binding cassette subfamily G member 2 located_in ISS
ISO 		GO_REF:0000024
(PMID:19506252) 		UniProt
RGD		 PMID:19506252 GO_REF:0000024 NCBI chr 4:89,006,056...89,132,915
Ensembl chr 4:89,005,969...89,132,493 		JBrowse link
G Ace angiotensin I converting enzyme IDA RGD PMID:2827504 RGD:8142378 NCBI chr10:91,410,129...91,430,246
Ensembl chr10:91,409,819...91,430,942 		JBrowse link
G Ace2 angiotensin converting enzyme 2 located_in IEA
ISO 		GO_REF:0000107
(PMID:19185582)
(PMID:25534429) 		Ensembl
RGD		 PMID:19185582 PMID:25534429 GO_REF:0000107 NCBI chr  X:33,925,458...33,972,851
Ensembl chr  X:33,925,458...33,971,596 		JBrowse link
G Amn amnion associated transmembrane protein IDA RGD PMID:17990981 RGD:2317831 NCBI chr 6:136,132,567...136,140,008
Ensembl chr 6:136,132,567...136,140,008 		JBrowse link
G Anpep alanyl aminopeptidase, membrane IDA RGD PMID:12110004 RGD:1626500 NCBI chr 1:143,176,645...143,219,447
Ensembl chr 1:143,176,645...143,195,101 		JBrowse link
G Aqp1 aquaporin 1 located_in ISO
ISS 		(PMID:9013443)
GO_REF:0000024 		RGD
UniProt		 PMID:9013443 GO_REF:0000024 NCBI chr 4:85,812,784...85,824,964
Ensembl chr 4:85,812,784...85,830,504 		JBrowse link
G Aqp7 aquaporin 7 IDA RGD PMID:10940724 RGD:1626293 NCBI chr 5:60,968,495...60,982,618
Ensembl chr 5:60,967,558...60,982,618 		JBrowse link
G Aqp8 aquaporin 8 located_in IDA PMID:18059526 UniProt PMID:18059526 RGD:155663542 NCBI chr 1:187,424,314...187,430,243
Ensembl chr 1:187,424,417...187,430,242 		JBrowse link
G Atp6v0a4 ATPase H+ transporting V0 subunit a4 located_in ISO
IEA 		(PMID:14638902)
GO_REF:0000107 		RGD
Ensembl		 PMID:14638902 GO_REF:0000107 NCBI chr 4:67,727,145...67,809,092
Ensembl chr 4:67,727,145...67,809,092 		JBrowse link
G Atp7a ATPase copper transporting alpha IDA RGD PMID:16081413 RGD:1581810 NCBI chr  X:75,159,635...75,267,094
Ensembl chr  X:75,159,782...75,267,093 		JBrowse link
G Atp8b1 ATPase phospholipid transporting 8B1 IDA RGD PMID:11584374 RGD:1599400 NCBI chr18:60,286,605...60,427,862
Ensembl chr18:60,288,464...60,427,027 		JBrowse link
G B4galt1 beta-1,4-galactosyltransferase 1 located_in IEA
ISO 		GO_REF:0000107
(PMID:3917437) 		Ensembl
RGD		 PMID:3917437 GO_REF:0000107 NCBI chr 5:60,731,601...60,778,456
Ensembl chr 5:60,731,602...60,778,445 		JBrowse link
G Ca4 carbonic anhydrase 4 located_in ISO (PMID:17409381) RGD PMID:17409381 NCBI chr10:70,325,102...70,333,916
Ensembl chr10:70,325,358...70,333,916 		JBrowse link
G Cd36 CD36 molecule located_in IDA
ISO 		PMID:21610069
(PMID:21610069) 		RGD PMID:21610069 PMID:21610069 RGD:10402038 NCBI chr 4:18,209,088...18,302,142 JBrowse link
G Cd36l1 CD36 molecule like 1 located_in IDA PMID:21610069 UniProt PMID:21610069 RGD:10402038 NCBI chr 4:18,316,806...18,357,863
Ensembl chr 4:18,261,059...18,405,365 		JBrowse link
G Cdhr2 cadherin-related family member 2 located_in ISO
IEA 		(PMID:24725409)
GO_REF:0000107 		RGD
Ensembl		 PMID:24725409 GO_REF:0000107 NCBI chr17:9,881,979...9,917,698
Ensembl chr17:9,881,979...9,917,698 		JBrowse link
G Cdhr5 cadherin-related family member 5 located_in ISO
IEA
ISS 		(PMID:24725409)
GO_REF:0000107
GO_REF:0000024 		RGD
Ensembl
UniProt		 PMID:24725409 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:205,802,686...205,811,184
Ensembl chr 1:205,802,686...205,811,093 		JBrowse link
G Cltrn collectrin, amino acid transport regulator located_in IEA
ISO 		GO_REF:0000107
(PMID:17167413) 		Ensembl
RGD		 PMID:17167413 GO_REF:0000107 NCBI chr  X:33,993,825...34,027,124
Ensembl chr  X:33,993,825...34,027,181 		JBrowse link
G Cubn cubilin located_in IDA PMID:12724130 RGD
UniProt		 PMID:17990981 PMID:12724130 RGD:2317831, RGD:1299150 NCBI chr17:81,293,619...81,501,694
Ensembl chr17:81,293,619...81,501,694 		JBrowse link
G Cybrd1 cytochrome b reductase 1 located_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:11230685)
(PMID:12949720) 		UniProt
Ensembl
RGD		 PMID:11230685 PMID:12949720 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:76,342,231...76,369,846
Ensembl chr 3:76,342,404...76,370,061 		JBrowse link
G Drd5 dopamine receptor D5 located_in IDA
ISO
IEA 		(PMID:15598876)
GO_REF:0000107 		RGD
Ensembl		 PMID:15598876 PMID:12623966 GO_REF:0000107, RGD:730287 NCBI chr14:76,700,244...76,703,344
Ensembl chr14:76,700,241...76,703,466 		JBrowse link
G Enpep glutamyl aminopeptidase IDA RGD PMID:12110004 RGD:1626500 NCBI chr 2:220,456,258...220,526,218
Ensembl chr 2:220,456,278...220,526,218 		JBrowse link
G Folr1 folate receptor alpha IDA RGD PMID:8447363 RGD:7244265 NCBI chr 1:165,631,462...165,650,430
Ensembl chr 1:165,631,462...165,642,669 		JBrowse link
G Gna12 G protein subunit alpha 12 located_in
is_active_in 		IDA
IEA
IBA 		GO_REF:0000117
GO_REF:0000033 		UniProt
GO_Central
RGD		 PMID:12623966 GO_REF:0000033 GO_REF:0000117, RGD:730287 NCBI chr12:18,919,629...19,000,185
Ensembl chr12:18,919,629...19,000,185 		JBrowse link
G Gna13 G protein subunit alpha 13 located_in
is_active_in 		IDA
IEA
IBA 		GO_REF:0000117
GO_REF:0000033 		UniProt
GO_Central
RGD		 PMID:12623966 GO_REF:0000033 GO_REF:0000117, RGD:730287 NCBI chr10:94,837,271...94,870,290
Ensembl chr10:94,836,444...94,874,968 		JBrowse link
G Hsp90aa1 heat shock protein 90 alpha family class A member 1 IDA RGD PMID:15497505 RGD:2316936 NCBI chr 6:135,523,604...135,529,687
Ensembl chr 6:135,523,616...135,528,499 		JBrowse link
G Hsp90ab1 heat shock protein 90 alpha family class B member 1 IDA RGD PMID:15497505 RGD:2316936 NCBI chr 9:22,930,249...22,935,929
Ensembl chr 9:22,931,070...22,935,926 		JBrowse link
G Itln1 intelectin 1 located_in ISO (PMID:16866365) RGD PMID:16866365 NCBI chr13:86,464,641...86,490,655
Ensembl chr13:86,464,669...86,490,651 		JBrowse link
G Kcnk1 potassium two pore domain channel subfamily K member 1 IDA RGD PMID:9843722 RGD:2316520 NCBI chr19:70,856,985...70,895,053
Ensembl chr19:70,856,985...70,895,051 		JBrowse link
G Lima1 LIM domain and actin binding 1 located_in ISO (PMID:29880681) RGD PMID:29880681 NCBI chr 7:132,780,556...132,880,343
Ensembl chr 7:132,780,556...132,880,386 		JBrowse link
G LOC134486712 platelet glycoprotein 4-like located_in IDA PMID:21610069 UniProt PMID:21610069 RGD:10402038 NCBI chr 4:18,372,301...18,408,431 JBrowse link
G Lrp2 LDL receptor related protein 2 located_in IDA
IEA
ISO 		GO_REF:0000117
(PMID:10662735)
GO_REF:0000107
PMID:12724130
PMID:6752952 		UniProt
RGD
Ensembl		 PMID:10662735 PMID:17453355 PMID:12724130 PMID:6752952 GO_REF:0000107 GO_REF:0000117, RGD:1641828, RGD:1299150, RGD:13210560 NCBI chr 3:74,597,148...74,754,535
Ensembl chr 3:74,597,148...74,754,535 		JBrowse link
G Mfsd10 major facilitator superfamily domain containing 10 is_active_in
located_in 		IBA
ISO 		GO_REF:0000033
(PMID:18638446) 		GO_Central
RGD		 PMID:18638446 GO_REF:0000033 NCBI chr14:80,327,961...80,331,984
Ensembl chr14:80,328,410...80,332,063 		JBrowse link
G Mttp microsomal triglyceride transfer protein IDA RGD PMID:15383310 RGD:1582565 NCBI chr 2:229,286,501...229,327,650
Ensembl chr 2:229,286,501...229,327,650 		JBrowse link
G Naglt1 Na+ dependent glucose transporter 1 IDA RGD PMID:12590146 RGD:633369 NCBI chr20:44,965,951...44,978,400
Ensembl chr20:44,949,395...44,978,687 		JBrowse link
G Nherf1 NHERF family PDZ scaffold protein 1 located_in ISO (PMID:15591354) RGD PMID:15591354 NCBI chr10:100,902,165...100,919,265
Ensembl chr10:100,901,227...100,919,579 		JBrowse link
G Npc1l1 NPC1 like intracellular cholesterol transporter 1 IDA RGD PMID:15777641 RGD:1642189 NCBI chr14:85,285,387...85,305,050
Ensembl chr14:85,285,390...85,305,050 		JBrowse link
G Pcmt1 protein-L-isoaspartate (D-aspartate) O-methyltransferase 1 IDA RGD PMID:7639720 RGD:10448282 NCBI chr 1:3,932,161...3,980,751
Ensembl chr 1:3,932,161...3,964,848 		JBrowse link
G Pdzk1 PDZ domain containing 1 located_in ISS
ISO 		GO_REF:0000024
(PMID:15523054), (PMID:16141316) 		UniProt
RGD		 PMID:15523054 PMID:16141316 GO_REF:0000024 NCBI chr 2:187,064,995...187,096,348
Ensembl chr 2:187,065,013...187,096,806 		JBrowse link
G Pemt phosphatidylethanolamine N-methyltransferase IDA RGD PMID:17614848 RGD:1642368 NCBI chr10:45,275,434...45,349,651
Ensembl chr10:45,275,412...45,420,037 		JBrowse link
G Pex19 peroxisomal biogenesis factor 19 IDA RGD PMID:14558883 RGD:1625491 NCBI chr13:87,124,654...87,141,170
Ensembl chr13:87,124,698...87,141,757 		JBrowse link
G Pik3cb phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit beta IDA RGD PMID:11931646 RGD:633612 NCBI chr 8:108,474,017...108,579,140
Ensembl chr 8:108,474,019...108,579,331 		JBrowse link
G Plb1 phospholipase B1 is_active_in IDA
IBA 		GO_REF:0000033 GO_Central
RGD		 PMID:1716922 PMID:8117729 GO_REF:0000033, RGD:6903950, RGD:6903951 NCBI chr 6:29,807,127...29,945,607
Ensembl chr 6:29,809,290...29,930,183 		JBrowse link
G Pld2 phospholipase D2 located_in ISO
IEA 		(PMID:15598876)
GO_REF:0000107 		RGD
Ensembl		 PMID:15598876 GO_REF:0000107 NCBI chr10:55,754,957...55,772,819
Ensembl chr10:55,754,988...55,771,435 		JBrowse link
G Prkcb protein kinase C, beta IDA RGD PMID:17272350 RGD:2308883 NCBI chr 1:186,263,397...186,594,743
Ensembl chr 1:186,263,447...186,594,740 		JBrowse link
G Ptger3 prostaglandin E receptor 3 IDA RGD PMID:15292051 RGD:10003094 NCBI chr 2:249,264,985...249,409,966
Ensembl chr 2:249,264,985...249,409,846 		JBrowse link
G Pth1r parathyroid hormone 1 receptor IDA RGD PMID:12647298 RGD:1599981 NCBI chr 8:119,572,295...119,597,405
Ensembl chr 8:119,575,868...119,598,108 		JBrowse link
G Rapgef3 Rap guanine nucleotide exchange factor 3 IDA RGD PMID:18495799 RGD:2314762 NCBI chr 7:130,754,883...130,777,303
Ensembl chr 7:130,754,871...130,777,668 		JBrowse link
G Shank2 SH3 and multiple ankyrin repeat domains 2 IDA RGD PMID:15917299 RGD:7243142 NCBI chr 1:208,575,144...209,020,300
Ensembl chr 1:208,598,772...209,018,736 		JBrowse link
G Si sucrase-isomaltase IDA MMO:0000679 RGD PMID:3287954 RGD:597015772 NCBI chr 2:159,804,568...159,884,902
Ensembl chr 2:159,804,568...159,883,934 		JBrowse link
G Slc11a2 solute carrier family 11 member 2 located_in IEA
ISO 		GO_REF:0000107
UniProtKB:P20722 (PMID:19252488) 		Ensembl
RGD		 PMID:19252488 GO_REF:0000107 NCBI chr 7:133,381,878...133,429,921
Ensembl chr 7:133,381,878...133,418,941 		JBrowse link
G Slc17a4 solute carrier family 17, member 4 located_in ISO
IEA 		(PMID:22460716)
GO_REF:0000107 		RGD
Ensembl		 PMID:22460716 GO_REF:0000107 NCBI chr17:41,629,417...41,646,623
Ensembl chr17:41,629,447...41,646,624 		JBrowse link
G Slc19a1 solute carrier family 19 member 1 IDA RGD PMID:23287122 RGD:7244264 NCBI chr20:11,583,928...11,601,959
Ensembl chr20:11,583,929...11,601,488 		JBrowse link
G Slc20a2 solute carrier family 20 member 2 located_in IDA PMID:20526720
PMID:19073637 		UniProt PMID:20526720 PMID:19073637 RGD:7243097, RGD:158013774 NCBI chr16:76,163,315...76,253,881
Ensembl chr16:76,162,922...76,253,881 		JBrowse link
G Slc22a12 solute carrier family 22 member 12 located_in ISS
ISO 		GO_REF:0000024
(PMID:14747372) 		UniProt
RGD		 PMID:14747372 GO_REF:0000024 NCBI chr 1:213,274,266...213,282,793
Ensembl chr 1:213,274,275...213,281,380 		JBrowse link
G Slc22a5 solute carrier family 22 member 5 located_in ISO
IEA 		(PMID:15238359)
GO_REF:0000107
(PMID:15523054) 		RGD
Ensembl		 PMID:15238359 PMID:15523054 GO_REF:0000107 NCBI chr10:38,509,072...38,536,240
Ensembl chr10:38,509,072...38,536,077 		JBrowse link
G Slc26a3 solute carrier family 26 member 3 IDA RGD PMID:11875004 RGD:727349 NCBI chr 6:53,751,415...53,792,300
Ensembl chr 6:53,751,415...53,792,294 		JBrowse link
G Slc26a4 solute carrier family 26 member 4 located_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:11459928) 		UniProt
Ensembl
RGD		 PMID:11459928 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:53,835,102...53,873,968
Ensembl chr 6:53,835,110...53,873,216 		JBrowse link
G Slc26a6 solute carrier family 26 member 6 located_in ISO
IEA 		(PMID:11087667)
GO_REF:0000107
(PMID:11842009), (PMID:16141316), (PMID:16532010)
(PMID:11459928) 		RGD
Ensembl		 PMID:11087667 PMID:11459928 PMID:11842009 PMID:16141316 PMID:16532010 GO_REF:0000107 NCBI chr 8:118,438,110...118,448,271
Ensembl chr 8:118,438,180...118,448,270 		JBrowse link
G Slc27a4 solute carrier family 27 member 4 located_in ISO
IEA 		(PMID:14512415)
GO_REF:0000107 		RGD
Ensembl		 PMID:14512415 GO_REF:0000107 NCBI chr 3:33,472,903...33,485,824
Ensembl chr 3:33,472,903...33,485,824 		JBrowse link
G Slc28a1 solute carrier family 28 member 1 located_in IEA
ISO 		GO_REF:0000107
(PMID:22492015) 		Ensembl
RGD		 PMID:22492015 GO_REF:0000107 NCBI chr 1:144,490,453...144,532,025
Ensembl chr 1:144,490,623...144,531,544 		JBrowse link
G Slc28a2 solute carrier family 28 member 2 located_in ISO (PMID:22492015) RGD PMID:22492015 NCBI chr 3:129,778,425...129,841,292
Ensembl chr 3:129,807,537...129,841,291 		JBrowse link
G Slc28a3 solute carrier family 28 member 3 located_in IEA
ISO 		GO_REF:0000107
(PMID:22492015) 		Ensembl
RGD		 PMID:22492015 GO_REF:0000107 NCBI chr17:6,068,034...6,120,421
Ensembl chr17:6,068,060...6,120,417 		JBrowse link
G Slc2a2 solute carrier family 2 member 2 IDA RGD PMID:17272350 RGD:2308883 NCBI chr 2:113,537,884...113,568,422
Ensembl chr 2:113,537,972...113,568,467 		JBrowse link
G Slc34a1 solute carrier family 34 member 1 located_in IDA PMID:8691716
PMID:9058191 		RGD
UniProt		 PMID:19493963 PMID:8691716 PMID:9058191 RGD:2311317, RGD:152025534, RGD:152025535 NCBI chr17:9,224,010...9,238,983
Ensembl chr17:9,224,010...9,238,983 		JBrowse link
G Slc34a2 solute carrier family 34 member 2 IDA RGD PMID:18586044 RGD:2311312 NCBI chr14:62,123,313...62,153,020
Ensembl chr14:62,123,316...62,143,360 		JBrowse link
G Slc34a3 solute carrier family 34 member 3 located_in IDA
ISO
IEA 		(PMID:12690469)
GO_REF:0000107
PMID:11880379 		RGD
Ensembl		 PMID:12690469 PMID:16985216 PMID:11880379 GO_REF:0000107, RGD:2311303, RGD:1299524 NCBI chr 3:28,442,455...28,447,997
Ensembl chr 3:28,442,457...28,447,997 		JBrowse link
G Slc3a1 solute carrier family 3 member 1 located_in ISO
IEA 		(PMID:12167606)
GO_REF:0000107 		RGD
Ensembl		 PMID:12167606 GO_REF:0000107 NCBI chr 6:15,361,037...15,396,695
Ensembl chr 6:15,361,046...15,394,775 		JBrowse link
G Slc46a1 solute carrier family 46 member 1 IDA RGD PMID:23287122 RGD:7244264 NCBI chr10:63,859,551...63,865,987
Ensembl chr10:63,859,504...63,866,869 		JBrowse link
G Slc5a1 solute carrier family 5 member 1 located_in IDA PMID:14986005 RGD
ARUK-UCL		 PMID:17272350 PMID:14986005 RGD:2308883, RGD:1579739 NCBI chr14:81,778,495...81,843,084
Ensembl chr14:81,778,348...81,846,624 		JBrowse link
G Slc5a2 solute carrier family 5 member 2 IDA RGD PMID:14506074 RGD:1599050 NCBI chr 1:192,277,621...192,283,742
Ensembl chr 1:192,277,621...192,283,742 		JBrowse link
G Slc5a6 solute carrier family 5 member 6 IDA RGD PMID:12620923 RGD:730078 NCBI chr 6:31,039,865...31,051,671
Ensembl chr 6:31,040,017...31,051,670 		JBrowse link
G Slc6a14 solute carrier family 6 member 14 IDA RGD PMID:17006743 RGD:1625275 NCBI chr  X:117,109,063...117,169,522
Ensembl chr  X:117,108,947...117,169,828 		JBrowse link
G Slc6a18 solute carrier family 6 member 18 located_in IEA
ISO 		GO_REF:0000107
(PMID:17167413) 		Ensembl
RGD		 PMID:17167413 GO_REF:0000107 NCBI chr 1:31,436,577...31,450,478
Ensembl chr 1:31,436,630...31,450,478 		JBrowse link
G Slc6a19 solute carrier family 6 member 19 located_in
is_active_in 		ISO
IEA
IBA 		(PMID:25534429)
GO_REF:0000107
(PMID:17167413), (PMID:19185582)
GO_REF:0000033 		RGD
Ensembl
GO_Central		 PMID:17167413 PMID:19185582 PMID:25534429 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:31,414,744...31,434,932
Ensembl chr 1:31,414,744...31,433,517 		JBrowse link
G Slc6a20a solute carrier family 6 member 20a located_in ISO (PMID:17167413) RGD PMID:17167413 NCBI chr 8:132,159,768...132,200,016
Ensembl chr 8:132,158,915...132,200,008 		JBrowse link
G Slc7a11 solute carrier family 7 member 11 located_in ISO (PMID:16399997) RGD PMID:16399997 NCBI chr 2:136,532,912...136,668,560
Ensembl chr 2:136,532,246...136,695,695 		JBrowse link
G Slc7a9 solute carrier family 7 member 9 located_in ISO
IEA
ISS 		(PMID:12167606)
GO_REF:0000107
GO_REF:0000024 		RGD
Ensembl
UniProt		 PMID:12167606 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:97,246,253...97,269,546
Ensembl chr 1:97,247,547...97,269,543 		JBrowse link
G Slc9a3 solute carrier family 9 member A3 located_in
is_active_in 		IDA
ISO
IBA 		(PMID:16141316)
GO_REF:0000033 		RGD
GO_Central		 PMID:16141316 PMID:15238256 GO_REF:0000033, RGD:1581378 NCBI chr 1:30,953,215...30,996,209
Ensembl chr 1:30,953,216...30,996,002 		JBrowse link
G Slco1a5 solute carrier organic anion transporter family, member 1A5 IDA RGD PMID:12751626 RGD:2303072 NCBI chr 4:176,903,387...176,985,589
Ensembl chr 4:176,903,330...176,985,563 		JBrowse link
G Trpm6 transient receptor potential cation channel, subfamily M, member 6 located_in ISO
IEA 		(PMID:14576148)
GO_REF:0000107 		RGD
Ensembl		 PMID:14576148 GO_REF:0000107 NCBI chr 1:225,559,528...225,747,106
Ensembl chr 1:225,576,872...225,747,108 		JBrowse link
kinociliary basal body term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdc14a cell division cycle 14A located_in ISO
IEA 		(PMID:29293958)
GO_REF:0000107 		RGD
Ensembl		 PMID:29293958 GO_REF:0000107 NCBI chr 2:206,910,475...207,070,537
Ensembl chr 2:206,910,475...207,091,722 		JBrowse link
G Ift20 intraflagellar transport 20 located_in ISO
IEA 		(PMID:25605782)
GO_REF:0000107 		RGD
Ensembl		 PMID:25605782 GO_REF:0000107 NCBI chr10:63,930,629...63,936,174
Ensembl chr10:63,930,681...63,936,172 		JBrowse link
G Mkks MKKS centrosomal shuttling protein located_in ISO
IEA 		(PMID:22446187)
GO_REF:0000107 		RGD
Ensembl		 PMID:22446187 GO_REF:0000107 NCBI chr 3:144,654,563...144,672,831
Ensembl chr 3:144,654,566...144,672,831 		JBrowse link
kinocilium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdc14a cell division cycle 14A located_in ISO
IEA 		(PMID:29293958)
GO_REF:0000044
GO_REF:0000107 		RGD
UniProt
Ensembl		 PMID:29293958 GO_REF:0000044 GO_REF:0000107 NCBI chr 2:206,910,475...207,070,537
Ensembl chr 2:206,910,475...207,091,722 		JBrowse link
G Cdh23 cadherin-related 23 located_in IEA
ISO 		GO_REF:0000107
(PMID:15882574) 		Ensembl
RGD		 PMID:15882574 GO_REF:0000107 NCBI chr20:28,783,124...29,165,624
Ensembl chr20:28,783,564...29,165,332 		JBrowse link
G Dcdc2 doublecortin domain containing 2 located_in
is_active_in 		IDA
IEA
IBA 		PMID:25601850
GO_REF:0000044
GO_REF:0000033 		UniProt
GO_Central		 PMID:25601850 GO_REF:0000033 GO_REF:0000044, RGD:10412291 NCBI chr17:40,274,009...40,459,757
Ensembl chr17:40,274,009...40,458,790 		JBrowse link
G Elmod3 ELMO domain containing 3 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 4:106,172,819...106,211,286
Ensembl chr 4:106,172,828...106,211,229 		JBrowse link
G Grxcr1 glutaredoxin and cysteine rich domain containing 1 is_active_in
located_in 		IBA
IEA
ISO 		GO_REF:0000033
GO_REF:0000044
GO_REF:0000107
(PMID:20137774) 		GO_Central
UniProt
Ensembl
RGD		 PMID:20137774 GO_REF:0000033 GO_REF:0000044 GO_REF:0000107 NCBI chr14:40,358,077...40,480,493
Ensembl chr14:40,358,077...40,480,493 		JBrowse link
G Ift88 intraflagellar transport 88 located_in ISO (PMID:18066062) RGD PMID:18066062 NCBI chr15:35,685,678...35,786,875
Ensembl chr15:35,688,927...35,781,634 		JBrowse link
G Kncn kinocilin located_in ISO
IEA 		(PMID:15855039), (PMID:20510926)
GO_REF:0000107 		RGD
Ensembl		 PMID:15855039 PMID:20510926 GO_REF:0000107 NCBI chr 5:134,600,214...134,603,657
Ensembl chr 5:134,600,214...134,603,657 		JBrowse link
G Rac1 Rac family small GTPase 1 located_in ISO (PMID:23533177) RGD PMID:23533177 NCBI chr12:16,150,411...16,170,864
Ensembl chr12:16,128,649...16,172,109 		JBrowse link
G Rsph9 radial spoke head component 9 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 9:22,337,681...22,350,515
Ensembl chr 9:22,337,668...22,351,448 		JBrowse link
G Strc stereocilin is_active_in
located_in 		IBA
IEA
ISO 		GO_REF:0000033
GO_REF:0000107
(PMID:21165971) 		GO_Central
Ensembl
RGD		 PMID:21165971 GO_REF:0000033 GO_REF:0000107 NCBI chr 3:128,785,817...128,811,773
Ensembl chr 3:128,789,290...128,808,023 		JBrowse link
G Tiam1 TIAM Rac1 associated GEF 1 located_in ISO (PMID:23533177) RGD PMID:23533177 NCBI chr11:42,517,527...42,866,280
Ensembl chr11:42,517,528...42,646,075 		JBrowse link
stereocilia ankle link term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adgrv1 adhesion G protein-coupled receptor V1 located_in ISO (PMID:16775142), (PMID:20502675), (PMID:24334608), (PMID:26401052) RGD PMID:16775142 PMID:20502675 PMID:24334608 PMID:26401052 NCBI chr 2:13,067,149...13,647,407
Ensembl chr 2:13,067,150...13,647,372 		JBrowse link
G Pdzd7 PDZ domain containing 7 located_in ISO
IEA 		(PMID:24334608), (PMID:26401052), (PMID:27525485)
GO_REF:0000107 		RGD
Ensembl		 PMID:24334608 PMID:26401052 PMID:27525485 GO_REF:0000107 NCBI chr 1:253,837,454...253,856,919
Ensembl chr 1:253,837,459...253,855,999 		JBrowse link
G Ush2a usherin part_of
located_in 		ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:20502675), (PMID:24334608), (PMID:26401052) 		UniProt
Ensembl
RGD		 PMID:20502675 PMID:24334608 PMID:26401052 GO_REF:0000024 GO_REF:0000107 NCBI chr13:102,368,783...103,035,230
Ensembl chr13:102,368,783...103,035,217 		JBrowse link
G Whrn whirlin located_in IDA
IEA
ISO
ISS 		PMID:23055499
GO_REF:0000117
GO_REF:0000107
(PMID:20502675), (PMID:24334608), (PMID:26401052)
GO_REF:0000024 		UniProt
Ensembl
RGD		 PMID:20502675 PMID:24334608 PMID:26401052 PMID:23055499 GO_REF:0000024 GO_REF:0000107 GO_REF:0000117, RGD:13800540 NCBI chr 5:81,843,820...81,933,400
Ensembl chr 5:81,843,820...81,927,381 		JBrowse link
stereocilia ankle link complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adgrv1 adhesion G protein-coupled receptor V1 part_of ISO (PMID:17567809) RGD PMID:17567809 NCBI chr 2:13,067,149...13,647,407
Ensembl chr 2:13,067,150...13,647,372 		JBrowse link
G Pdzd7 PDZ domain containing 7 part_of IBA
IEA
ISO 		GO_REF:0000033
GO_REF:0000107
(PMID:27525485) 		GO_Central
Ensembl
RGD		 PMID:27525485 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:253,837,454...253,856,919
Ensembl chr 1:253,837,459...253,855,999 		JBrowse link
G Ush1c USH1 protein network component harmonin part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:105,831,719...105,880,082
Ensembl chr 1:105,831,723...105,880,082 		JBrowse link
G Ush2a usherin part_of ISS
ISO
IEA 		GO_REF:0000024
(PMID:17567809)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:17567809 GO_REF:0000024 GO_REF:0000107 NCBI chr13:102,368,783...103,035,230
Ensembl chr13:102,368,783...103,035,217 		JBrowse link
G Vezt vezatin, adherens junctions transmembrane protein part_of ISS
ISO 		GO_REF:0000024
(PMID:17567809) 		UniProt
RGD		 PMID:17567809 GO_REF:0000024 NCBI chr 7:30,399,208...30,484,429
Ensembl chr 7:30,421,243...30,484,347 		JBrowse link
G Whrn whirlin part_of ISS
ISO
IBA
IEA 		GO_REF:0000024
(PMID:17567809)
GO_REF:0000033
GO_REF:0000107 		UniProt
RGD
GO_Central
Ensembl		 PMID:17567809 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 5:81,843,820...81,933,400
Ensembl chr 5:81,843,820...81,927,381 		JBrowse link
stereocilia tip-link density term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Diaph3 diaphanous-related formin 3 is_active_in ISO
IEA 		(PMID:23441200)
GO_REF:0000107 		RGD
Ensembl		 PMID:23441200 GO_REF:0000107 NCBI chr15:68,951,992...69,421,623
Ensembl chr15:68,951,989...69,421,552 		JBrowse link
stereocilium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adcy6 adenylate cyclase 6 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 7:131,621,860...131,642,923
Ensembl chr 7:131,621,860...131,642,770 		JBrowse link
G Adgrv1 adhesion G protein-coupled receptor V1 is_active_in IDA
ISO
IBA 		(PMID:26754646)
GO_REF:0000033 		RGD
GO_Central		 PMID:26754646 PMID:16301216 GO_REF:0000033, RGD:8548636 NCBI chr 2:13,067,149...13,647,407
Ensembl chr 2:13,067,150...13,647,372 		JBrowse link
G Ankrd24 ankyrin repeat domain 24 located_in
part_of 		ISO
IEA 		(PMID:35175278)
GO_REF:0000107 		RGD
Ensembl		 PMID:35175278 GO_REF:0000107 NCBI chr 7:8,712,720...8,731,910
Ensembl chr 7:8,712,722...8,731,910 		JBrowse link
G Atp8b1 ATPase phospholipid transporting 8B1 located_in IEA
ISO 		GO_REF:0000107
GO_REF:0000044
(PMID:19478059) 		Ensembl
UniProt
RGD		 PMID:19478059 GO_REF:0000044 GO_REF:0000107 NCBI chr18:60,286,605...60,427,862
Ensembl chr18:60,288,464...60,427,027 		JBrowse link
G Bbs2 Bardet-Biedl syndrome 2 located_in ISO
IEA 		(PMID:25605782)
GO_REF:0000107 		RGD
Ensembl		 PMID:25605782 GO_REF:0000107 NCBI chr19:10,915,566...10,950,911
Ensembl chr19:10,915,476...10,950,921 		JBrowse link
G Calb1 calbindin 1 located_in IDA
IEA 		GO_REF:0000117 UniProt
RGD		 PMID:16120789 GO_REF:0000117, RGD:7175527 NCBI chr 5:34,172,612...34,199,555
Ensembl chr 5:34,172,664...34,200,160 		JBrowse link
G Calb2 calbindin 2 located_in IDA
IEA 		GO_REF:0000117 UniProt
RGD		 PMID:16120789 GO_REF:0000117, RGD:7175527 NCBI chr19:55,023,849...55,050,858
Ensembl chr19:55,023,838...55,057,952 		JBrowse link
G Cdh23 cadherin-related 23 located_in ISO
IEA 		(PMID:12485990), (PMID:15882574), (PMID:16481439), (PMID:17050716)
GO_REF:0000107 		RGD
Ensembl		 PMID:12485990 PMID:15882574 PMID:16481439 PMID:17050716 GO_REF:0000107 NCBI chr20:28,783,124...29,165,624
Ensembl chr20:28,783,564...29,165,332 		JBrowse link
G Cib2 calcium and integrin binding family member 2 located_in
is_active_in 		ISO
IEA
IBA
ISS 		(PMID:26173970), (PMID:26426422)
GO_REF:0000107
GO_REF:0000044
(PMID:23023331)
GO_REF:0000033
GO_REF:0000024 		RGD
Ensembl
UniProt
GO_Central		 PMID:23023331 PMID:26173970 PMID:26426422 GO_REF:0000024 GO_REF:0000033 GO_REF:0000044 GO_REF:0000107 NCBI chr 8:63,826,410...63,843,301
Ensembl chr 8:63,826,411...63,843,277 		JBrowse link
G Clic5 chloride intracellular channel 5 located_in ISO
IEA 		(PMID:17021174)
GO_REF:0000044 		RGD
UniProt		 PMID:17021174 GO_REF:0000044 NCBI chr 9:24,208,455...24,310,964
Ensembl chr 9:24,208,456...24,358,780 		JBrowse link
G Clrn1 clarin 1 located_in ISO
IEA 		(PMID:19539019)
GO_REF:0000107 		RGD
Ensembl		 PMID:19539019 GO_REF:0000107 NCBI chr 2:145,233,941...145,280,855
Ensembl chr 2:145,233,941...145,280,855 		JBrowse link
G Dock4 dedicator of cytokinesis 4 located_in ISO
IEA 		(PMID:16464467)
GO_REF:0000107 		RGD
Ensembl		 PMID:16464467 GO_REF:0000107 NCBI chr 6:63,240,050...63,629,772
Ensembl chr 6:63,240,136...63,629,772 		JBrowse link
G Elmod3 ELMO domain containing 3 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 4:106,172,819...106,211,286
Ensembl chr 4:106,172,828...106,211,229 		JBrowse link
G Eps8 EGFR pathway substrate 8, signaling adaptor located_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000044
GO_REF:0000107
(PMID:21236676), (PMID:24741995) 		UniProt
Ensembl
RGD		 PMID:21236676 PMID:24741995 GO_REF:0000024 GO_REF:0000044 GO_REF:0000107 NCBI chr 4:172,119,497...172,291,670
Ensembl chr 4:172,119,497...172,218,160 		JBrowse link
G Eps8l2 EPS8 signaling adaptor L2 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 1:205,875,825...205,901,109
Ensembl chr 1:205,875,801...205,901,101 		JBrowse link
G Espn espin located_in ISO
IEA 		(PMID:29572253)
GO_REF:0000107
(PMID:20510926)
GO_REF:0000044 		RGD
Ensembl
UniProt		 PMID:20510926 PMID:29572253 GO_REF:0000044 GO_REF:0000107 NCBI chr 5:167,909,271...167,943,168
Ensembl chr 5:167,909,271...167,942,984 		JBrowse link
G Espnl espin-like located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 9:99,358,907...99,385,439
Ensembl chr 9:99,359,578...99,384,342 		JBrowse link
G Fchsd2 FCH and double SH3 domains 2 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 1:164,775,916...165,097,391
Ensembl chr 1:164,775,926...165,097,391 		JBrowse link
G Fscn2 fascin actin-bundling protein 2, retinal located_in ISO
IEA 		(PMID:20660251)
GO_REF:0000044
GO_REF:0000107 		RGD
UniProt
Ensembl		 PMID:20660251 GO_REF:0000044 GO_REF:0000107 NCBI chr10:106,121,038...106,139,683
Ensembl chr10:106,133,144...106,139,683 		JBrowse link
G Grxcr1 glutaredoxin and cysteine rich domain containing 1 is_active_in
located_in 		IBA
IEA
ISO 		GO_REF:0000033
GO_REF:0000044
GO_REF:0000107
(PMID:20137774), (PMID:30380417) 		GO_Central
UniProt
Ensembl
RGD		 PMID:20137774 PMID:30380417 GO_REF:0000033 GO_REF:0000044 GO_REF:0000107 NCBI chr14:40,358,077...40,480,493
Ensembl chr14:40,358,077...40,480,493 		JBrowse link
G Homer2 homer scaffold protein 2 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 1:144,968,207...145,069,022
Ensembl chr 1:144,976,436...145,068,997 		JBrowse link
G Ift20 intraflagellar transport 20 located_in ISO
IEA 		(PMID:25605782)
GO_REF:0000107 		RGD
Ensembl		 PMID:25605782 GO_REF:0000107 NCBI chr10:63,930,629...63,936,174
Ensembl chr10:63,930,681...63,936,172 		JBrowse link
G Loxhd1 lipoxygenase homology PLAT domains 1 is_active_in
located_in 		IBA
ISO 		GO_REF:0000033
(PMID:19732867) 		GO_Central
RGD		 PMID:19732867 GO_REF:0000033 NCBI chr18:73,093,142...73,245,784
Ensembl chr18:73,093,142...73,245,784 		JBrowse link
G Minar2 membrane integral NOTCH2 associated receptor 2 is_active_in ISO (PMID:35727972) RGD PMID:35727972 NCBI chr18:54,737,670...54,752,388
Ensembl chr18:54,737,662...54,752,384 		JBrowse link
G Morn4 MORN repeat containing 4 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 1:250,837,639...250,847,943
Ensembl chr 1:250,837,643...250,848,026 		JBrowse link
G Myo15a myosin XVA located_in ISO
IEA 		(PMID:20016102)
GO_REF:0000044
GO_REF:0000107 		RGD
UniProt
Ensembl		 PMID:20016102 GO_REF:0000044 GO_REF:0000107 NCBI chr10:45,776,907...45,835,473
Ensembl chr10:45,776,907...45,835,473 		JBrowse link
G Myo1c myosin 1C located_in ISO
IEA 		(PMID:17050716)
GO_REF:0000107 		RGD
Ensembl		 PMID:17050716 GO_REF:0000107 NCBI chr10:60,996,642...61,019,022
Ensembl chr10:60,996,638...61,019,022 		JBrowse link
G Myo3a myosin IIIA located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr17:89,451,567...89,667,654
Ensembl chr17:89,451,567...89,667,654 		JBrowse link
G Myo3b myosin IIIB located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 3:75,228,017...75,636,272
Ensembl chr 3:75,228,017...75,636,272 		JBrowse link
G Myo7a myosin VIIA is_active_in
located_in 		ISO
IEA 		(PMID:26754646)
GO_REF:0000107
(PMID:12485990), (PMID:16481439), (PMID:20016102), (PMID:27525485) 		RGD
Ensembl		 PMID:12485990 PMID:16481439 PMID:20016102 PMID:26754646 PMID:27525485 GO_REF:0000107 NCBI chr 1:161,755,110...161,825,397
Ensembl chr 1:161,755,110...161,825,365 		JBrowse link
G Nherf1 NHERF family PDZ scaffold protein 1 located_in ISO (PMID:24920589) RGD PMID:24920589 NCBI chr10:100,902,165...100,919,265
Ensembl chr10:100,901,227...100,919,579 		JBrowse link
G Nherf2 NHERF family PDZ scaffold protein 2 located_in ISO (PMID:24920589) RGD PMID:24920589 NCBI chr10:14,167,005...14,177,519
Ensembl chr10:14,167,005...14,177,593 		JBrowse link
G Ocm oncomodulin IDA RGD PMID:16120789 RGD:7175527 NCBI chr12:15,649,452...15,710,375
Ensembl chr12:15,676,520...15,710,379 		JBrowse link
G Pafah1b1 platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 located_in ISO
IEA 		(PMID:23533177)
GO_REF:0000107 		RGD
Ensembl		 PMID:23533177 GO_REF:0000107 NCBI chr10:60,031,441...60,090,259
Ensembl chr10:60,032,514...60,090,196 		JBrowse link
G Pcdh15 protocadherin related 15 is_active_in
located_in 		ISO
IEA 		(PMID:26754646)
GO_REF:0000107
GO_REF:0000002
(PMID:14570705) 		RGD
Ensembl
InterPro		 PMID:14570705 PMID:26754646 GO_REF:0000002 GO_REF:0000107 NCBI chr20:13,996,383...15,495,206
Ensembl chr20:13,999,116...15,493,958 		JBrowse link
G Pdzd7 PDZ domain containing 7 located_in ISO
IEA 		(PMID:27525485), (PMID:31448880)
GO_REF:0000044
GO_REF:0000107 		RGD
UniProt
Ensembl		 PMID:27525485 PMID:31448880 GO_REF:0000044 GO_REF:0000107 NCBI chr 1:253,837,454...253,856,919
Ensembl chr 1:253,837,459...253,855,999 		JBrowse link
G Piezo1 piezo-type mechanosensitive ion channel component 1 located_in ISS
ISO 		GO_REF:0000024
(PMID:38228630) 		UniProt
RGD		 PMID:38228630 GO_REF:0000024 NCBI chr19:67,453,120...67,515,347
Ensembl chr19:67,453,122...67,515,037 		JBrowse link
G Piezo2 piezo-type mechanosensitive ion channel component 2 located_in ISO (PMID:38228630) RGD PMID:38228630 NCBI chr18:58,738,734...59,115,252
Ensembl chr18:58,738,740...59,115,215 		JBrowse link
G Pls1 plastin 1 located_in ISO
IEA 		(PMID:25124451)
GO_REF:0000107 		RGD
Ensembl		 PMID:25124451 GO_REF:0000107 NCBI chr 8:105,196,312...105,306,252
Ensembl chr 8:105,197,455...105,292,447 		JBrowse link
G Pls3 plastin 3 IDA RGD PMID:12378542 RGD:731234 NCBI chr  X:116,401,247...116,495,898
Ensembl chr  X:116,401,293...116,495,893 		JBrowse link
G Prom1 prominin 1 located_in ISO (PMID:15316084) RGD PMID:15316084 NCBI chr14:71,202,303...71,307,008
Ensembl chr14:71,202,336...71,307,002 		JBrowse link
G Ptprq protein tyrosine phosphatase, receptor type, Q located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 7:44,720,916...44,903,291
Ensembl chr 7:44,720,916...44,903,291 		JBrowse link
G Pvalb parvalbumin IDA RGD PMID:16120789 RGD:7175527 NCBI chr 7:111,653,820...111,668,469
Ensembl chr 7:111,653,111...111,668,446 		JBrowse link
G Rdx radixin located_in ISO
IEA 		(PMID:17021174)
GO_REF:0000107 		RGD
Ensembl		 PMID:17021174 GO_REF:0000107 NCBI chr 8:61,275,792...61,348,260
Ensembl chr 8:61,274,460...61,333,967 		JBrowse link
G Rhoc ras homolog family member C located_in ISO (PMID:27269051) RGD PMID:27269051 NCBI chr 2:194,975,586...194,981,637
Ensembl chr 2:194,975,242...194,983,745 		JBrowse link
G Ripor2 RHO family interacting cell polarization regulator 2 located_in IDA
IEA
ISO 		PMID:24958875
GO_REF:0000044
(PMID:27269051) 		UniProt
RGD		 PMID:27269051 PMID:24958875 GO_REF:0000044, RGD:10047244 NCBI chr17:40,751,771...40,975,611
Ensembl chr17:40,751,771...40,975,337 		JBrowse link
G Slc4a7 solute carrier family 4 member 7 located_in IDA
IEA 		GO_REF:0000044 UniProt
RGD		 PMID:16301216 GO_REF:0000044, RGD:8548636 NCBI chr15:13,015,854...13,095,485
Ensembl chr15:13,015,854...13,095,292 		JBrowse link
G Stx4 syntaxin 4 located_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000044
(PMID:36355422) 		UniProt
RGD		 PMID:36355422 GO_REF:0000024 GO_REF:0000044 NCBI chr 1:191,880,549...191,890,333
Ensembl chr 1:191,881,559...191,896,774 		JBrowse link
G Tmc1 transmembrane channel-like 1 located_in ISO
IEA 		(PMID:38228630)
GO_REF:0000107 		RGD
Ensembl		 PMID:38228630 GO_REF:0000107 NCBI chr 1:227,701,781...227,872,534
Ensembl chr 1:227,701,781...227,872,534 		JBrowse link
G Tmc2 transmembrane channel-like 2 located_in ISO
IEA 		(PMID:38228630)
GO_REF:0000107 		RGD
Ensembl		 PMID:38228630 GO_REF:0000107 NCBI chr 3:137,849,513...137,917,462
Ensembl chr 3:137,849,513...137,917,462 		JBrowse link
G Tprn taperin located_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000044
GO_REF:0000107
(PMID:20170899), (PMID:27269051) 		UniProt
Ensembl
RGD		 PMID:20170899 PMID:27269051 GO_REF:0000024 GO_REF:0000044 GO_REF:0000107 NCBI chr 3:28,474,322...28,481,800
Ensembl chr 3:28,473,620...28,482,117 		JBrowse link
G Tspear thrombospondin-type laminin G domain and EAR repeats located_in ISO
IEA 		(PMID:22678063)
GO_REF:0000044
GO_REF:0000107 		RGD
UniProt
Ensembl		 PMID:22678063 GO_REF:0000044 GO_REF:0000107 NCBI chr20:10,771,365...10,944,285
Ensembl chr20:10,771,371...10,943,708 		JBrowse link
G Twf2 twinfilin actin-binding protein 2 located_in ISO (PMID:19955359) RGD PMID:19955359 NCBI chr 8:115,723,980...115,737,025
Ensembl chr 8:115,723,970...115,737,025 		JBrowse link
G Ush1c USH1 protein network component harmonin located_in
is_active_in 		IDA
ISO 		(PMID:12485990), (PMID:20016102)
(PMID:26754646) 		RGD PMID:12485990 PMID:20016102 PMID:26754646 PMID:16301216 RGD:8548636 NCBI chr 1:105,831,719...105,880,082
Ensembl chr 1:105,831,723...105,880,082 		JBrowse link
G Ush2a usherin located_in IDA
IEA 		hair cell
GO_REF:0000117 		UniProt
RGD		 PMID:16301216 GO_REF:0000117, RGD:8548636 NCBI chr13:102,368,783...103,035,230
Ensembl chr13:102,368,783...103,035,217 		JBrowse link
G Whrn whirlin located_in IDA
IEA
ISO
ISS 		GO_REF:0000107
GO_REF:0000044
(PMID:15590698), (PMID:15590699), (PMID:15654330)
GO_REF:0000024 		Ensembl
UniProt
RGD		 PMID:15590698 PMID:15590699 PMID:15654330 PMID:16434480 GO_REF:0000024 GO_REF:0000044 GO_REF:0000107, RGD:1600128 NCBI chr 5:81,843,820...81,933,400
Ensembl chr 5:81,843,820...81,927,381 		JBrowse link
G Zswim6 zinc finger, SWIM-type containing 6 located_in ISO (PMID:25105228) RGD PMID:25105228 NCBI chr 2:40,944,617...41,112,340
Ensembl chr 2:40,946,435...41,112,519 		JBrowse link
stereocilium base term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clic5 chloride intracellular channel 5 located_in IDA
ISO 		PMID:24285636
(PMID:37952086) 		RGD PMID:37952086 PMID:24285636 RGD:401966878 NCBI chr 9:24,208,455...24,310,964
Ensembl chr 9:24,208,456...24,358,780 		JBrowse link
G Grxcr2 glutaredoxin and cysteine rich domain containing 2 is_active_in
located_in 		IBA
IEA
ISO 		GO_REF:0000033
GO_REF:0000107
(PMID:30380417) 		GO_Central
Ensembl
RGD		 PMID:30380417 GO_REF:0000033 GO_REF:0000107 NCBI chr18:34,235,734...34,249,139
Ensembl chr18:34,235,734...34,371,894 		JBrowse link
G Myo7a myosin VIIA located_in ISO
IEA 		(PMID:17567809)
GO_REF:0000107 		RGD
Ensembl		 PMID:17567809 GO_REF:0000107 NCBI chr 1:161,755,110...161,825,397
Ensembl chr 1:161,755,110...161,825,365 		JBrowse link
G Pjvk pejvakin located_in ISO
IEA 		(PMID:28209736)
GO_REF:0000107 		RGD
Ensembl		 PMID:28209736 GO_REF:0000107 NCBI chr 3:82,002,106...82,012,273
Ensembl chr 3:82,002,368...82,012,451 		JBrowse link
G Ptprq protein tyrosine phosphatase, receptor type, Q located_in IEA
ISS
ISO 		GO_REF:0000107
GO_REF:0000024
(PMID:24285636), (PMID:37952086) 		Ensembl
UniProt
RGD		 PMID:24285636 PMID:37952086 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:44,720,916...44,903,291
Ensembl chr 7:44,720,916...44,903,291 		JBrowse link
G Rdx radixin located_in ISO
IEA 		(PMID:24285636), (PMID:30159668)
GO_REF:0000107 		RGD
Ensembl		 PMID:24285636 PMID:30159668 GO_REF:0000107 NCBI chr 8:61,275,792...61,348,260
Ensembl chr 8:61,274,460...61,333,967 		JBrowse link
G Tprn taperin is_active_in
located_in 		IBA
IEA
ISO
ISS 		GO_REF:0000033
GO_REF:0000107
(PMID:24285636), (PMID:28209736), (PMID:30159668), (PMID:30380417), (PMID:37952086)
GO_REF:0000024 		GO_Central
Ensembl
RGD
UniProt		 PMID:24285636 PMID:28209736 PMID:30159668 PMID:30380417 PMID:37952086 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 3:28,474,322...28,481,800
Ensembl chr 3:28,473,620...28,482,117 		JBrowse link
G Triobp TRIO and F-actin binding protein located_in ISO (PMID:28209736) RGD PMID:28209736 NCBI chr 7:112,386,371...112,452,130
Ensembl chr 7:112,386,420...112,442,924 		JBrowse link
stereocilium bundle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clic5 chloride intracellular channel 5 located_in IDA PMID:17021174 MGI PMID:17021174 RGD:8554297 NCBI chr 9:24,208,455...24,310,964
Ensembl chr 9:24,208,456...24,358,780 		JBrowse link
G Clrn2 clarin 2 located_in ISO
IEA 		(PMID:31448880)
GO_REF:0000107 		RGD
Ensembl		 PMID:31448880 GO_REF:0000107 NCBI chr14:69,868,556...69,878,850
Ensembl chr14:69,868,556...69,878,850 		JBrowse link
G Dock4 dedicator of cytokinesis 4 located_in ISO
IEA 		(PMID:16464467)
GO_REF:0000107 		RGD
Ensembl		 PMID:16464467 GO_REF:0000107 NCBI chr 6:63,240,050...63,629,772
Ensembl chr 6:63,240,136...63,629,772 		JBrowse link
G Eps8 EGFR pathway substrate 8, signaling adaptor located_in ISO
IEA 		(PMID:23918390)
GO_REF:0000107 		RGD
Ensembl		 PMID:23918390 GO_REF:0000107 NCBI chr 4:172,119,497...172,291,670
Ensembl chr 4:172,119,497...172,218,160 		JBrowse link
G Eps8l2 EPS8 signaling adaptor L2 located_in ISO
IEA 		(PMID:23918390)
GO_REF:0000107 		RGD
Ensembl		 PMID:23918390 GO_REF:0000107 NCBI chr 1:205,875,825...205,901,109
Ensembl chr 1:205,875,801...205,901,101 		JBrowse link
G Espn espin located_in ISO (PMID:20016102) RGD PMID:20016102 NCBI chr 5:167,909,271...167,943,168
Ensembl chr 5:167,909,271...167,942,984 		JBrowse link
G Ido1 indoleamine 2,3-dioxygenase 1 located_in IEA
ISO 		GO_REF:0000107
(PMID:19741271) 		Ensembl
RGD		 PMID:19741271 GO_REF:0000107 NCBI chr16:74,133,259...74,145,328
Ensembl chr16:74,133,259...74,145,328 		JBrowse link
G Lhfpl5 LHFPL tetraspan subfamily member 5 located_in ISO
IEA 		(PMID:17876667)
GO_REF:0000107 		RGD
Ensembl		 PMID:17876667 GO_REF:0000107 NCBI chr20:6,634,058...6,644,264
Ensembl chr20:6,633,979...6,644,657 		JBrowse link
G Myo15a myosin XVA located_in ISO
IEA 		(PMID:20016102)
GO_REF:0000107 		RGD
Ensembl		 PMID:20016102 GO_REF:0000107 NCBI chr10:45,776,907...45,835,473
Ensembl chr10:45,776,907...45,835,473 		JBrowse link
G Myo1c myosin 1C located_in IDA
IEA 		GO_REF:0000117 UniProt
RGD		 PMID:12486594 GO_REF:0000117, RGD:1298992 NCBI chr10:60,996,642...61,019,022
Ensembl chr10:60,996,638...61,019,022 		JBrowse link
G Nherf2 NHERF family PDZ scaffold protein 2 located_in ISO (PMID:24920589) RGD PMID:24920589 NCBI chr10:14,167,005...14,177,519
Ensembl chr10:14,167,005...14,177,593 		JBrowse link
G Ptprq protein tyrosine phosphatase, receptor type, Q located_in ISO
IEA 		(PMID:22357859)
GO_REF:0000107 		RGD
Ensembl		 PMID:22357859 GO_REF:0000107 NCBI chr 7:44,720,916...44,903,291
Ensembl chr 7:44,720,916...44,903,291 		JBrowse link
G Trpa1 transient receptor potential cation channel, subfamily A, member 1 located_in ISO
IEA 		(PMID:15483558), (PMID:15843607)
GO_REF:0000107 		RGD
Ensembl		 PMID:15483558 PMID:15843607 GO_REF:0000107 NCBI chr 5:9,163,060...9,217,325
Ensembl chr 5:9,163,060...9,217,325 		JBrowse link
G Ush2a usherin located_in ISO
IEA 		(PMID:17360538)
GO_REF:0000107 		RGD
Ensembl		 PMID:17360538 GO_REF:0000107 NCBI chr13:102,368,783...103,035,230
Ensembl chr13:102,368,783...103,035,217 		JBrowse link
G Whrn whirlin located_in ISO
IEA 		(PMID:20016102)
GO_REF:0000107 		RGD
Ensembl		 PMID:20016102 GO_REF:0000107 NCBI chr 5:81,843,820...81,933,400
Ensembl chr 5:81,843,820...81,927,381 		JBrowse link
stereocilium coat term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pkhd1l1 PKHD1 like 1 located_in ISO
IEA 		(PMID:31444330)
GO_REF:0000107 		RGD
Ensembl		 PMID:31444330 GO_REF:0000107 NCBI chr 7:77,505,063...77,679,994
Ensembl chr 7:77,505,152...77,679,994 		JBrowse link
stereocilium membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adgrv1 adhesion G protein-coupled receptor V1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 2:13,067,149...13,647,407
Ensembl chr 2:13,067,150...13,647,372 		JBrowse link
G Cacna1b calcium voltage-gated channel subunit alpha1 B ISO RGD (All species) (All species) NCBI chr 3:27,779,133...27,944,292
Ensembl chr 3:27,779,166...27,944,285 		JBrowse link
G Myo1c myosin 1C located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr10:60,996,642...61,019,022
Ensembl chr10:60,996,638...61,019,022 		JBrowse link
G Pkhd1l1 PKHD1 like 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 7:77,505,063...77,679,994
Ensembl chr 7:77,505,152...77,679,994 		JBrowse link
G Ripor2 RHO family interacting cell polarization regulator 2 located_in IDA
IEA 		PMID:24958875
GO_REF:0000044 		UniProt PMID:24958875 GO_REF:0000044, RGD:10047244 NCBI chr17:40,751,771...40,975,611
Ensembl chr17:40,751,771...40,975,337 		JBrowse link
G Ush2a usherin located_in IEA
ISO 		GO_REF:0000107
GO_REF:0000044
(PMID:16301217) 		Ensembl
UniProt
RGD		 PMID:16301217 GO_REF:0000044 GO_REF:0000107 NCBI chr13:102,368,783...103,035,230
Ensembl chr13:102,368,783...103,035,217 		JBrowse link
G Vezt vezatin, adherens junctions transmembrane protein located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 7:30,399,208...30,484,429
Ensembl chr 7:30,421,243...30,484,347 		JBrowse link
stereocilium shaft term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fchsd2 FCH and double SH3 domains 2 located_in ISO
IEA 		(PMID:23437151)
GO_REF:0000107 		RGD
Ensembl		 PMID:23437151 GO_REF:0000107 NCBI chr 1:164,775,916...165,097,391
Ensembl chr 1:164,775,926...165,097,391 		JBrowse link
G Grxcr2 glutaredoxin and cysteine rich domain containing 2 is_active_in
located_in 		IBA
IEA
ISO 		GO_REF:0000033
GO_REF:0000107
(PMID:30380417) 		GO_Central
Ensembl
RGD		 PMID:30380417 GO_REF:0000033 GO_REF:0000107 NCBI chr18:34,235,734...34,249,139
Ensembl chr18:34,235,734...34,371,894 		JBrowse link
stereocilium tip term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdc14a cell division cycle 14A located_in ISO
IEA 		(PMID:29293958)
GO_REF:0000107 		RGD
Ensembl		 PMID:29293958 GO_REF:0000107 NCBI chr 2:206,910,475...207,070,537
Ensembl chr 2:206,910,475...207,091,722 		JBrowse link
G Cdh23 cadherin-related 23 located_in IEA
ISO 		GO_REF:0000107
(PMID:12485990), (PMID:17050716), (PMID:24920589) 		Ensembl
RGD		 PMID:12485990 PMID:17050716 PMID:24920589 GO_REF:0000107 NCBI chr20:28,783,124...29,165,624
Ensembl chr20:28,783,564...29,165,332 		JBrowse link
G Ceacam16 CEA cell adhesion molecule 16, tectorial membrane component located_in IEA
ISO
ISS 		GO_REF:0000107
(PMID:21368133)
GO_REF:0000024 		Ensembl
RGD
UniProt		 PMID:21368133 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:88,642,925...88,652,821
Ensembl chr 1:88,642,925...88,652,821 		JBrowse link
G Coro1a coronin 1A is_active_in ISO (PMID:26754646) RGD PMID:26754646 NCBI chr 1:190,726,129...190,731,133
Ensembl chr 1:190,726,130...190,731,102 		JBrowse link
G Eps8 EGFR pathway substrate 8, signaling adaptor located_in IEA
ISO 		GO_REF:0000107
(PMID:23918390) 		Ensembl
RGD		 PMID:23918390 GO_REF:0000107 NCBI chr 4:172,119,497...172,291,670
Ensembl chr 4:172,119,497...172,218,160 		JBrowse link
G Eps8l2 EPS8 signaling adaptor L2 located_in ISO
IEA 		(PMID:23918390)
GO_REF:0000107 		RGD
Ensembl		 PMID:23918390 GO_REF:0000107 NCBI chr 1:205,875,825...205,901,109
Ensembl chr 1:205,875,801...205,901,101 		JBrowse link
G Espn espin located_in
is_active_in 		ISS
ISO 		GO_REF:0000024
(PMID:22264607), (PMID:26754646)
(PMID:26754646) 		UniProt
RGD		 PMID:22264607 PMID:26754646 GO_REF:0000024 NCBI chr 5:167,909,271...167,943,168
Ensembl chr 5:167,909,271...167,942,984 		JBrowse link
G Espnl espin-like is_active_in
located_in 		ISO
IEA 		(PMID:26754646)
GO_REF:0000107
(PMID:26926603) 		RGD
Ensembl		 PMID:26754646 PMID:26926603 GO_REF:0000107 NCBI chr 9:99,358,907...99,385,439
Ensembl chr 9:99,359,578...99,384,342 		JBrowse link
G Homer2 homer scaffold protein 2 located_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:25816005)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:25816005 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:144,968,207...145,069,022
Ensembl chr 1:144,976,436...145,068,997 		JBrowse link
G Lhfpl5 LHFPL tetraspan subfamily member 5 located_in ISO
IEA 		(PMID:23217710)
GO_REF:0000107 		RGD
Ensembl		 PMID:23217710 GO_REF:0000107 NCBI chr20:6,634,058...6,644,264
Ensembl chr20:6,633,979...6,644,657 		JBrowse link
G Morn4 MORN repeat containing 4 located_in
is_active_in 		ISS
ISO 		GO_REF:0000024
(PMID:26754646) 		UniProt
RGD		 PMID:26754646 GO_REF:0000024 NCBI chr 1:250,837,639...250,847,943
Ensembl chr 1:250,837,643...250,848,026 		JBrowse link
G Myo3a myosin IIIA is_active_in
located_in 		IBA
IEA
ISO 		GO_REF:0000033
GO_REF:0000117
(PMID:21165622), (PMID:22264607), (PMID:26754646)
(PMID:26754646) 		GO_Central
UniProt
RGD		 PMID:21165622 PMID:22264607 PMID:26754646 GO_REF:0000033 GO_REF:0000117 NCBI chr17:89,451,567...89,667,654
Ensembl chr17:89,451,567...89,667,654 		JBrowse link
G Myo3b myosin IIIB is_active_in
located_in 		IBA
IEA
ISO 		GO_REF:0000033
GO_REF:0000117
(PMID:22264607), (PMID:26754646)
(PMID:26754646) 		GO_Central
UniProt
RGD		 PMID:22264607 PMID:26754646 GO_REF:0000033 GO_REF:0000117 NCBI chr 3:75,228,017...75,636,272
Ensembl chr 3:75,228,017...75,636,272 		JBrowse link
G Nherf1 NHERF family PDZ scaffold protein 1 located_in ISO (PMID:24920589) RGD PMID:24920589 NCBI chr10:100,902,165...100,919,265
Ensembl chr10:100,901,227...100,919,579 		JBrowse link
G Pdzd7 PDZ domain containing 7 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:253,837,454...253,856,919
Ensembl chr 1:253,837,459...253,855,999 		JBrowse link
G Pkhd1l1 PKHD1 like 1 located_in ISO
IEA 		(PMID:31444330)
GO_REF:0000107 		RGD
Ensembl		 PMID:31444330 GO_REF:0000107 NCBI chr 7:77,505,063...77,679,994
Ensembl chr 7:77,505,152...77,679,994 		JBrowse link
G Strc stereocilin is_active_in
located_in 		IBA
IEA
ISO 		GO_REF:0000033
GO_REF:0000107
(PMID:18849963), (PMID:21165971), (PMID:24920589), (PMID:31448880) 		GO_Central
Ensembl
RGD		 PMID:18849963 PMID:21165971 PMID:24920589 PMID:31448880 GO_REF:0000033 GO_REF:0000107 NCBI chr 3:128,785,817...128,811,773
Ensembl chr 3:128,789,290...128,808,023 		JBrowse link
G Tmc1 transmembrane channel-like 1 located_in ISO
IEA 		(PMID:22105175)
GO_REF:0000107 		RGD
Ensembl		 PMID:22105175 GO_REF:0000107 NCBI chr 1:227,701,781...227,872,534
Ensembl chr 1:227,701,781...227,872,534 		JBrowse link
G Tmc2 transmembrane channel-like 2 located_in ISO
IEA 		(PMID:22105175)
GO_REF:0000107 		RGD
Ensembl		 PMID:22105175 GO_REF:0000107 NCBI chr 3:137,849,513...137,917,462
Ensembl chr 3:137,849,513...137,917,462 		JBrowse link
G Ush1c USH1 protein network component harmonin is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:105,831,719...105,880,082
Ensembl chr 1:105,831,723...105,880,082 		JBrowse link
G Whrn whirlin located_in
is_active_in 		IDA
IEA
ISO
IBA 		PMID:23055499
GO_REF:0000117
(PMID:24334608), (PMID:31448880)
GO_REF:0000033
GO_REF:0000107 		UniProt
RGD
GO_Central
Ensembl		 PMID:24334608 PMID:31448880 PMID:23055499 GO_REF:0000033 GO_REF:0000107 GO_REF:0000117, RGD:13800540 NCBI chr 5:81,843,820...81,933,400
Ensembl chr 5:81,843,820...81,927,381 		JBrowse link
upper tip-link density term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Myo7a myosin VIIA IDA RGD PMID:21709241 RGD:8699498 NCBI chr 1:161,755,110...161,825,397
Ensembl chr 1:161,755,110...161,825,365 		JBrowse link
G Ush1c USH1 protein network component harmonin located_in ISO (PMID:31448880) RGD PMID:31448880 NCBI chr 1:105,831,719...105,880,082
Ensembl chr 1:105,831,723...105,880,082 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 21544
    cellular anatomical structure 21390
      cluster of actin-based cell projections 221
        brush border + 149
        stereocilium bundle + 79
        tuft 0
paths to the root