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ONTOLOGY REPORT - ANNOTATIONS

Term:sequence-specific single stranded DNA binding
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Accession:GO:0098847 term browser browse the term
Definition:Binding to single-stranded DNA of a specific nucleotide composition.

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sequence-specific single stranded DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hsf1 heat shock transcription factor 1 ISO RGD PMID:21512157 RGD:10402944 NCBI chrNW_004936470:7,927,734...7,950,805
Ensembl chrNW_004936470:7,928,095...7,933,337 		JBrowse link
G Pcbp1 poly(rC) binding protein 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936491:14,280,616...14,282,148
Ensembl chrNW_004936491:14,280,695...14,281,765 		JBrowse link
C-rich strand telomeric DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nabp2 nucleic acid binding protein 2 NOT|enables ISO (PMID:25589350) BHF-UCL PMID:25589350 NCBI chrNW_004936646:632,390...638,900
Ensembl chrNW_004936646:632,121...639,868 		JBrowse link
G-rich strand telomeric DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctc1 CST telomere replication complex component 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936595:1,456,911...1,476,331
Ensembl chrNW_004936595:1,454,508...1,476,593 		JBrowse link
G Hnrnpa1 heterogeneous nuclear ribonucleoprotein A1 enables ISO (PMID:23935072) BHF-UCL PMID:23935072 NCBI chrNW_004936512:11,481,017...11,487,737 JBrowse link
G Hnrnpa2b1 heterogeneous nuclear ribonucleoprotein A2/B1 enables ISO PMID:23184978 BHF-UCL PMID:23184978 RGD:11567256 NCBI chrNW_004936478:2,970,261...2,980,277
Ensembl chrNW_004936478:2,970,468...2,980,381 		JBrowse link
G Nabp2 nucleic acid binding protein 2 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936646:632,390...638,900
Ensembl chrNW_004936646:632,121...639,868 		JBrowse link
G Pot1 protection of telomeres 1 enables IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936605:836,824...919,099
Ensembl chrNW_004936605:836,769...920,201 		JBrowse link
G Rpa1 replication protein A1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936538:7,941,074...7,997,062
Ensembl chrNW_004936538:7,946,403...7,994,864 		JBrowse link
G Rpa2 replication protein A2 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:12,127,026...12,147,120
Ensembl chrNW_004936474:12,126,245...12,147,130 		JBrowse link
G Terf1 telomeric repeat binding factor 1 enables ISO (PMID:17694070) BHF-UCL PMID:17694070 NCBI chrNW_004936648:1,809,395...1,835,890 JBrowse link
G Terf2 telomeric repeat binding factor 2 enables IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936475:19,469,501...19,498,494
Ensembl chrNW_004936475:19,468,702...19,498,793 		JBrowse link
G Terf2ip TERF2 interacting protein enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:24,312,140...24,319,492
Ensembl chrNW_004936475:24,312,101...24,320,543 		JBrowse link
single-stranded telomeric DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hnrnpa2b1 heterogeneous nuclear ribonucleoprotein A2/B1 enables IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936478:2,970,261...2,980,277
Ensembl chrNW_004936478:2,970,468...2,980,381 		JBrowse link
G LOC101963985 heterogeneous nuclear ribonucleoproteins A2/B1-like enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936491:10,703,450...10,742,975 JBrowse link
G LOC101970638 heterogeneous nuclear ribonucleoproteins A2/B1-like enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936503:12,298,622...12,299,633 JBrowse link
G LOC101977351 heterogeneous nuclear ribonucleoproteins A2/B1-like enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936859:709,392...710,609 JBrowse link
G Pot1 protection of telomeres 1 enables IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936605:836,824...919,099
Ensembl chrNW_004936605:836,769...920,201 		JBrowse link
G Rad50 RAD50 double strand break repair protein enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936647:2,546,100...2,637,524
Ensembl chrNW_004936647:2,543,599...2,637,846 		JBrowse link
G Stn1 STN1 subunit of CST complex enables IEA UniProt
InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 NCBI chrNW_004936600:2,230,754...2,266,956
Ensembl chrNW_004936600:2,230,705...2,266,968 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 18185
    binding 16304
      nucleic acid binding 4039
        DNA binding 1942
          sequence-specific DNA binding 1333
            sequence-specific single stranded DNA binding 17
              single-stranded telomeric DNA binding + 15
paths to the root