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ONTOLOGY REPORT - ANNOTATIONS

Term:sequence-specific single stranded DNA binding
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Accession:GO:0098847 term browser browse the term
Definition:Binding to single-stranded DNA of a specific nucleotide composition.

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sequence-specific single stranded DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hsf1 heat shock transcription factor 1 ISO RGD PMID:21512157 RGD:10402944 NCBI chrNW_004624735:12,536,818...12,562,643
Ensembl chrNW_004624735:12,537,128...12,562,644 		JBrowse link
G Pcbp1 poly(rC) binding protein 1 enables ISO (PMID:15836633) MGI PMID:15836633 NCBI chrNW_004624762:3,330,978...3,332,582 JBrowse link
C-rich strand telomeric DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nabp2 nucleic acid binding protein 2 NOT|enables ISO (PMID:25589350) BHF-UCL PMID:25589350 NCBI chrNW_004624802:11,774,237...11,780,822
Ensembl chrNW_004624802:11,774,237...11,780,250 		JBrowse link
G-rich strand telomeric DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctc1 CST telomere replication complex component 1 enables ISO (PMID:22763445) BHF-UCL PMID:22763445 NCBI chrNW_004624786:10,795,848...10,819,029
Ensembl chrNW_004624786:10,795,193...10,819,613 		JBrowse link
G Hnrnpa1 heterogeneous nuclear ribonucleoprotein A1 enables ISO (PMID:23935072) BHF-UCL PMID:23935072 NCBI chrNW_004624904:2,314,197...2,320,900
Ensembl chrNW_004624904:2,314,249...2,318,791 		JBrowse link
G Hnrnpa2b1 heterogeneous nuclear ribonucleoprotein A2/B1 enables ISO PMID:23184978 BHF-UCL PMID:23184978 RGD:11567256 NCBI chrNW_004624739:4,343,164...4,353,123
Ensembl chrNW_004624739:4,343,246...4,352,066 		JBrowse link
G Nabp2 nucleic acid binding protein 2 enables ISO (PMID:25589350) BHF-UCL PMID:25589350 NCBI chrNW_004624802:11,774,237...11,780,822
Ensembl chrNW_004624802:11,774,237...11,780,250 		JBrowse link
G Pot1 protection of telomeres 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624783:11,138,222...11,223,329
Ensembl chrNW_004624783:11,138,303...11,223,044 		JBrowse link
G Rpa1 replication protein A1 enables ISO (PMID:26041456)
(PMID:16973897), (PMID:24747047)		 BHF-UCL PMID:16973897 PMID:24747047 PMID:26041456 NCBI chrNW_004624786:4,547,889...4,604,605
Ensembl chrNW_004624786:4,547,962...4,604,290 		JBrowse link
G Rpa2 replication protein A2 enables ISO (PMID:24747047) BHF-UCL PMID:24747047 NCBI chrNW_004624764:11,737,234...11,763,862
Ensembl chrNW_004624764:11,736,129...11,764,080 		JBrowse link
G Terf1 telomeric repeat binding factor 1 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624744:18,120,677...18,156,920
Ensembl chrNW_004624744:18,121,687...18,156,989 		JBrowse link
G Terf2 telomeric repeat binding factor 2 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624746:16,992,049...17,020,809
Ensembl chrNW_004624746:16,992,110...17,019,857 		JBrowse link
single-stranded telomeric DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hnrnpa2b1 heterogeneous nuclear ribonucleoprotein A2/B1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624739:4,343,164...4,353,123
Ensembl chrNW_004624739:4,343,246...4,352,066 		JBrowse link
G Pot1 protection of telomeres 1 enables IEA InterPro GO_REF:0000002 NCBI chrNW_004624783:11,138,222...11,223,329
Ensembl chrNW_004624783:11,138,303...11,223,044 		JBrowse link
G Rad50 RAD50 double strand break repair protein enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624733:39,445,083...39,544,415
Ensembl chrNW_004624733:39,447,461...39,544,409 		JBrowse link
G Stn1 STN1 subunit of CST complex enables IEA InterPro
Ensembl
UniProt		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 NCBI chrNW_004624831:2,999,061...3,030,447
Ensembl chrNW_004624831:2,999,800...3,030,443 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 17910
    binding 15581
      nucleic acid binding 3362
        DNA binding 2157
          sequence-specific DNA binding 1467
            sequence-specific single stranded DNA binding 13
              single-stranded telomeric DNA binding + 11
paths to the root