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ONTOLOGY REPORT - ANNOTATIONS

Term:sequence-specific single stranded DNA binding
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Accession:GO:0098847 term browser browse the term
Definition:Binding to single-stranded DNA of a specific nucleotide composition.


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sequence-specific single stranded DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hsf1 heat shock factor 1 enables ISO RGD
GO_Central		 PMID:21512157 GO_REF:0000096 RGD:10402944 NCBI chr15:76,361,562...76,385,355
Ensembl chr15:76,361,622...76,386,113 		JBrowse link
G Pcbp1 poly(rC) binding protein 1 enables IDA (PMID:15836633) MGI PMID:15836633 NCBI chr 6:86,501,462...86,503,171
Ensembl chr 6:86,501,474...86,503,303 		JBrowse link
C-rich strand telomeric DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nabp2 nucleic acid binding protein 2 NOT|enables ISO (PMID:25589350) BHF-UCL PMID:25589350 NCBI chr10:128,237,263...128,247,426
Ensembl chr10:128,237,264...128,247,361 		JBrowse link
G-rich strand telomeric DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctc1 CTS telomere maintenance complex component 1 enables ISO
IEA		 GO_Central
Ensembl		 GO_REF:0000107 GO_REF:0000119 NCBI chr11:68,906,014...68,927,299
Ensembl chr11:68,906,737...68,927,299 		JBrowse link
G Hnrnpa1 heterogeneous nuclear ribonucleoprotein A1 enables ISO GO_Central GO_REF:0000119 NCBI chr15:103,148,840...103,155,119
Ensembl chr15:103,148,859...103,155,119 		JBrowse link
G Hnrnpa2b1 heterogeneous nuclear ribonucleoprotein A2/B1 enables ISO GO_Central GO_REF:0000096 NCBI chr 6:51,437,414...51,448,054
Ensembl chr 6:51,437,912...51,446,874 		JBrowse link
G Nabp2 nucleic acid binding protein 2 enables ISO GO_Central GO_REF:0000119 NCBI chr10:128,237,263...128,247,426
Ensembl chr10:128,237,264...128,247,361 		JBrowse link
G Pot1a protection of telomeres 1A enables IBA
ISO		 GO_Central GO_REF:0000033 GO_REF:0000119 NCBI chr 6:25,743,939...25,809,280
Ensembl chr 6:25,743,736...25,809,245 		JBrowse link
G Pot1b protection of telomeres 1B enables IBA
ISO		 GO_Central GO_REF:0000033 GO_REF:0000119 NCBI chr17:55,958,190...56,019,647
Ensembl chr17:55,958,951...56,019,628 		JBrowse link
G Rpa1 replication protein A1 enables ISO GO_Central GO_REF:0000119 NCBI chr11:75,191,085...75,239,478
Ensembl chr11:75,188,992...75,239,150 		JBrowse link
G Rpa2 replication protein A2 enables ISO
IEA		 GO_Central
Ensembl		 GO_REF:0000107 GO_REF:0000119 NCBI chr 4:132,495,671...132,506,057
Ensembl chr 4:132,495,643...132,506,063 		JBrowse link
G Terf1 telomeric repeat binding factor 1 enables ISO
IEA		 GO_Central
Ensembl		 GO_REF:0000107 GO_REF:0000119 NCBI chr 1:15,875,634...15,914,283
Ensembl chr 1:15,875,870...15,914,276 		JBrowse link
G Terf2 telomeric repeat binding factor 2 enables IBA
IEA
ISO		 GO_Central
Ensembl		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000119 NCBI chr 8:107,796,032...107,823,180
Ensembl chr 8:107,796,032...107,823,179 		JBrowse link
G Terf2ip telomeric repeat binding factor 2, interacting protein enables ISO
IEA		 GO_Central
Ensembl		 GO_REF:0000107 GO_REF:0000119 NCBI chr 8:112,737,991...112,747,160
Ensembl chr 8:112,738,030...112,747,160 		JBrowse link
single-stranded telomeric DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hnrnpa2b1 heterogeneous nuclear ribonucleoprotein A2/B1 enables ISO
IBA
ISS		 GO_Central
HGNC-UCL
UniProt		 GO_REF:0000024 GO_REF:0000033 GO_REF:0000096 GO_REF:0000119 NCBI chr 6:51,437,414...51,448,054
Ensembl chr 6:51,437,912...51,446,874 		JBrowse link
G Pot1a protection of telomeres 1A enables IDA
ISO
ISS		 (PMID:17053789) MGI
GO_Central
UniProt		 PMID:17053789 GO_REF:0000024 GO_REF:0000119 NCBI chr 6:25,743,939...25,809,280
Ensembl chr 6:25,743,736...25,809,245 		JBrowse link
G Pot1b protection of telomeres 1B enables IDA
ISO		 (PMID:17053789) MGI
GO_Central		 PMID:17053789 GO_REF:0000119 NCBI chr17:55,958,190...56,019,647
Ensembl chr17:55,958,951...56,019,628 		JBrowse link
G Rad50 RAD50 double strand break repair protein enables IBA GO_Central GO_REF:0000033 NCBI chr11:53,540,346...53,598,146
Ensembl chr11:53,540,346...53,598,146 		JBrowse link
G Rpa1 replication protein A1 enables IBA GO_Central GO_REF:0000033 NCBI chr11:75,191,085...75,239,478
Ensembl chr11:75,188,992...75,239,150 		JBrowse link
G Stn1 STN1, CST complex subunit enables ISS
ISO		 UniProt
GO_Central		 GO_REF:0000024 GO_REF:0000119 NCBI chr19:47,489,470...47,534,284
Ensembl chr19:47,489,472...47,525,946 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 28796
    binding 17614
      nucleic acid binding 3756
        DNA binding 2357
          sequence-specific DNA binding 1604
            sequence-specific single stranded DNA binding 15
              single-stranded telomeric DNA binding + 13
paths to the root