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ONTOLOGY REPORT - ANNOTATIONS

Term:sequence-specific single stranded DNA binding
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Accession:GO:0098847 term browser browse the term
Definition:Binding to single-stranded DNA of a specific nucleotide composition.

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sequence-specific single stranded DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HSF1 heat shock transcription factor 1 ISO RGD PMID:21512157 RGD:10402944 NCBI chr 8:138,503,836...138,529,562
Ensembl chr 8:138,503,831...138,529,165 		JBrowse link
G PCBP1 poly(rC) binding protein 1 enables IEA Ensembl GO_REF:0000107 NCBI chr14:37,013,486...37,015,119
Ensembl chr14:37,013,880...37,014,947 		JBrowse link
C-rich strand telomeric DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NABP2 nucleic acid binding protein 2 NOT|enables ISO (PMID:25589350) BHF-UCL PMID:25589350 NCBI chr11:52,176,021...52,183,204
Ensembl chr11:52,177,987...52,182,572 		JBrowse link
G-rich strand telomeric DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTC1 CST telomere replication complex component 1 enables IEA Ensembl GO_REF:0000107 NCBI chr16:7,594,493...7,618,202
Ensembl chr16:7,594,219...7,615,754 		JBrowse link
G HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 enables IEA Ensembl GO_REF:0000107 NCBI chr11:50,397,173...50,403,192
Ensembl chr11:50,396,888...50,400,802 		JBrowse link
G HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 enables ISO PMID:23184978 BHF-UCL PMID:23184978 RGD:11567256 NCBI chr21:32,167,126...32,178,031
Ensembl chr21:32,167,337...32,176,980 		JBrowse link
G LOC103245886 heterogeneous nuclear ribonucleoprotein A1-like enables IEA Ensembl GO_REF:0000107 NCBI chr26:47,513,308...47,515,651 JBrowse link
G LOC119622192 heterogeneous nuclear ribonucleoprotein A1-like enables IEA Ensembl GO_REF:0000107
G NABP2 nucleic acid binding protein 2 enables IEA Ensembl GO_REF:0000107 NCBI chr11:52,176,021...52,183,204
Ensembl chr11:52,177,987...52,182,572 		JBrowse link
G POT1 protection of telomeres 1 enables IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chr21:93,572,139...93,688,374
Ensembl chr21:93,571,272...93,655,869 		JBrowse link
G RPA1 replication protein A1 enables IEA Ensembl GO_REF:0000107 NCBI chr16:1,470,375...1,537,603
Ensembl chr16:1,470,474...1,539,246 		JBrowse link
G RPA2 replication protein A2 enables ISO (PMID:24747047) BHF-UCL PMID:24747047 NCBI chr20:104,882,739...104,904,612 JBrowse link
G RPA2 replication protein A2 enables IEA Ensembl GO_REF:0000107 Ensembl chr20:104,883,027...104,904,951 JBrowse link
G TERF1 telomeric repeat binding factor 1 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 8:68,608,830...68,647,220
Ensembl chr 8:68,608,844...68,648,171 		JBrowse link
G TERF2 telomeric repeat binding factor 2 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:58,019,422...58,051,819
Ensembl chr 5:58,019,468...58,050,802 		JBrowse link
G TERF2IP TERF2 interacting protein enables IEA Ensembl GO_REF:0000107 NCBI chr 5:61,133,028...61,142,713
Ensembl chr 5:61,133,173...61,141,896 		JBrowse link
single-stranded telomeric DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 enables IEA TreeGrafter GO_REF:0000118 NCBI chr21:32,167,126...32,178,031
Ensembl chr21:32,167,337...32,176,980 		JBrowse link
G LOC103235629 heterogeneous nuclear ribonucleoproteins A2/B1-like enables IEA TreeGrafter GO_REF:0000118 NCBI chr 7:9,610,008...9,611,665 JBrowse link
G LOC119625213 heterogeneous nuclear ribonucleoproteins A2/B1 enables IEA TreeGrafter GO_REF:0000118
G POT1 protection of telomeres 1 enables IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chr21:93,572,139...93,688,374
Ensembl chr21:93,571,272...93,655,869 		JBrowse link
G RAD50 RAD50 double strand break repair protein enables IEA TreeGrafter GO_REF:0000118 NCBI chr23:35,375,206...35,458,801
Ensembl chr23:35,375,305...35,458,622 		JBrowse link
G RPA1 replication protein A1 enables IEA TreeGrafter GO_REF:0000118 NCBI chr16:1,470,375...1,537,603
Ensembl chr16:1,470,474...1,539,246 		JBrowse link
G STN1 STN1 subunit of CST complex enables IEA InterPro
UniProt
Ensembl		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 NCBI chr 9:96,919,584...96,967,941
Ensembl chr 9:96,915,951...96,967,394 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 19845
    binding 18023
      nucleic acid binding 4834
        DNA binding 2244
          sequence-specific DNA binding 1559
            sequence-specific single stranded DNA binding 19
              single-stranded telomeric DNA binding + 17
paths to the root