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ONTOLOGY REPORT - ANNOTATIONS

Term:sequence-specific single stranded DNA binding
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Accession:GO:0098847 term browser browse the term
Definition:Binding to single-stranded DNA of a specific nucleotide composition.

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sequence-specific single stranded DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hsf1 heat shock transcription factor 1 ISO RGD PMID:21512157 RGD:10402944 NCBI chrNW_004955454:2,907,265...2,932,352
Ensembl chrNW_004955454:2,907,265...2,932,351 		JBrowse link
G Pcbp1 poly(rC) binding protein 1 enables ISO (PMID:15836633) MGI PMID:15836633 NCBI chrNW_004955424:15,045,642...15,047,184
Ensembl chrNW_004955424:15,046,011...15,047,081 		JBrowse link
C-rich strand telomeric DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nabp2 nucleic acid binding protein 2 NOT|enables ISO (PMID:25589350) BHF-UCL PMID:25589350 NCBI chrNW_004955458:3,835,205...3,836,841
Ensembl chrNW_004955458:3,835,205...3,840,634 		JBrowse link
G-rich strand telomeric DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctc1 CST telomere replication complex component 1 enables ISO (PMID:22763445) BHF-UCL PMID:22763445 NCBI chrNW_004955467:8,673,069...8,700,730
Ensembl chrNW_004955467:8,673,128...8,702,165 		JBrowse link
G Hnrnpa1 heterogeneous nuclear ribonucleoprotein A1 enables ISO (PMID:23935072) BHF-UCL PMID:23935072 NCBI chrNW_004955458:1,530,163...1,536,874 JBrowse link
G Hnrnpa2b1 heterogeneous nuclear ribonucleoprotein A2/B1 enables ISO PMID:23184978 BHF-UCL PMID:23184978 RGD:11567256 NCBI chrNW_004955410:28,032,193...28,042,459
Ensembl chrNW_004955410:28,032,193...28,042,459 		JBrowse link
G Nabp2 nucleic acid binding protein 2 enables ISO (PMID:25589350) BHF-UCL PMID:25589350 NCBI chrNW_004955458:3,835,205...3,836,841
Ensembl chrNW_004955458:3,835,205...3,840,634 		JBrowse link
G Pot1 protection of telomeres 1 enables ISO (PMID:17237768), (PMID:21852327), (PMID:22763445) BHF-UCL PMID:17237768 PMID:21852327 PMID:22763445 NCBI chrNW_004955479:6,140,599...6,230,512
Ensembl chrNW_004955479:6,140,501...6,209,031 		JBrowse link
G Rpa1 replication protein A1 enables ISO (PMID:16973897), (PMID:24747047)
(PMID:26041456)		 BHF-UCL PMID:16973897 PMID:24747047 PMID:26041456 NCBI chrNW_004955481:1,304,035...1,361,806 JBrowse link
G Rpa2 replication protein A2 enables ISO (PMID:24747047) BHF-UCL PMID:24747047 NCBI chrNW_004955452:7,080,641...7,098,009
Ensembl chrNW_004955452:7,080,579...7,097,742 		JBrowse link
G Terf1 telomeric repeat binding factor 1 enables ISO (PMID:17694070) BHF-UCL PMID:17694070 NCBI chrNW_004955444:7,103,282...7,149,450
Ensembl chrNW_004955444:7,103,552...7,150,323 		JBrowse link
G Terf2 telomeric repeat binding factor 2 enables ISO (PMID:17694070) BHF-UCL PMID:17694070 NCBI chrNW_004955484:7,318,813...7,344,221
Ensembl chrNW_004955484:7,318,860...7,347,430 		JBrowse link
single-stranded telomeric DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hnrnpa2b1 heterogeneous nuclear ribonucleoprotein A2/B1 enables ISO (PMID:15659580) HGNC-UCL
UniProt		 PMID:15659580 RGD:10680046 NCBI chrNW_004955410:28,032,193...28,042,459
Ensembl chrNW_004955410:28,032,193...28,042,459 		JBrowse link
G Pot1 protection of telomeres 1 enables ISO (PMID:12768206)
(PMID:17053789)
(PMID:15632080), (PMID:17237767)		 UniProt
MGI
BHF-UCL		 PMID:12768206 PMID:15632080 PMID:17053789 PMID:17237767 NCBI chrNW_004955479:6,140,599...6,230,512
Ensembl chrNW_004955479:6,140,501...6,209,031 		JBrowse link
G Stn1 STN1 subunit of CST complex enables ISO (PMID:19648609) UniProt PMID:19648609 NCBI chrNW_004955485:6,748,682...6,784,119
Ensembl chrNW_004955485:6,748,234...6,784,762 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 14380
    binding 13664
      nucleic acid binding 1892
        DNA binding 1363
          sequence-specific DNA binding 1064
            sequence-specific single stranded DNA binding 12
              single-stranded telomeric DNA binding + 10
paths to the root