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ONTOLOGY REPORT - ANNOTATIONS

Term:postsynaptic endosome
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Accession:GO:0098845 term browser browse the term
Definition:An endosomal compartment that is part of the post-synapse. Only early and recycling endosomes are typically present in the postsynapse.


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postsynaptic endosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agap1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 is_active_in IDA PMID:27713690 SynGO PMID:27713690 RGD:405650302 NCBI chr 9:90,039,720...90,475,196
Ensembl chr 9:90,039,605...90,470,958 		JBrowse link
G Arc activity-regulated cytoskeleton-associated protein is_active_in IMP
IDA		 PMID:17088211 SynGO PMID:17088211 PMID:17088211 RGD:10047209, RGD:10047209 NCBI chr 7:106,555,968...106,559,697
Ensembl chr 7:106,555,785...106,559,378 		JBrowse link
G Clstn1 calsyntenin 1 located_in
is_active_in		 IEA
ISO		 GO_REF:0000107
(PMID:24966372)		 Ensembl
RGD		 PMID:24966372 GO_REF:0000107 NCBI chr 5:160,031,235...160,094,585
Ensembl chr 5:160,031,308...160,094,583 		JBrowse link
G Kif21b kinesin family member 21B is_active_in ISO (PMID:29949770) RGD PMID:29949770 NCBI chr13:47,576,129...47,626,112
Ensembl chr13:47,576,160...47,626,127 		JBrowse link
G Nsg1 neuronal vesicle trafficking associated 1 is_active_in IDA PMID:12070131 SynGO PMID:12070131 RGD:9850097 NCBI chr14:72,648,771...72,670,521
Ensembl chr14:72,648,741...72,670,514 		JBrowse link
G Pik3c3 phosphatidylinositol 3-kinase, catalytic subunit type 3 is_active_in
located_in		 ISO
IEA		 (PMID:35318705)
GO_REF:0000107		 RGD
Ensembl		 PMID:35318705 GO_REF:0000107 NCBI chr18:21,845,282...21,934,387
Ensembl chr18:21,845,295...21,929,048 		JBrowse link
G Sh3gl3 SH3 domain containing GRB2 like 3, endophilin A3 is_active_in IDA
IMP		 PMID:17088211 SynGO PMID:17088211 PMID:17088211 RGD:10047209, RGD:10047209 NCBI chr 1:136,124,500...136,255,669
Ensembl chr 1:136,124,499...136,255,584 		JBrowse link
extrinsic component of postsynaptic early endosome membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gripap1 GRIP1 associated protein 1 is_active_in IDA
IBA		 PMID:20098723
GO_REF:0000033		 GO_Central PMID:20098723 GO_REF:0000033, RGD:12050105 NCBI chr  X:14,678,896...14,708,747
Ensembl chr  X:14,678,898...14,708,679 		JBrowse link
extrinsic component of postsynaptic endosome membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Snx1 sorting nexin 1 is_active_in ISO (PMID:24261326) RGD PMID:24261326 NCBI chr 8:66,630,086...66,670,418
Ensembl chr 8:66,630,086...66,670,360 		JBrowse link
postsynaptic early endosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eea1 early endosome antigen 1 is_active_in ISO (PMID:17113235), (PMID:34564930) RGD PMID:17113235 PMID:34564930 NCBI chr 7:30,554,686...30,722,186
Ensembl chr 7:30,554,552...30,718,487 		JBrowse link
G Snx27 sorting nexin 27 is_active_in
located_in		 ISO
IEA		 (PMID:24458027)
GO_REF:0000107		 RGD
Ensembl		 PMID:24458027 GO_REF:0000107 NCBI chr 2:182,135,904...182,218,906
Ensembl chr 2:182,135,905...182,218,906 		JBrowse link
G Snx6 sorting nexin 6 is_active_in ISO (PMID:28134614) RGD PMID:28134614 NCBI chr 6:72,230,950...72,274,157
Ensembl chr 6:72,229,870...72,315,911 		JBrowse link
G Vps26b VPS26 retromer complex component B is_active_in ISO (PMID:34965419) RGD PMID:34965419 NCBI chr 8:25,415,877...25,436,985
Ensembl chr 8:25,415,261...25,436,985 		JBrowse link
postsynaptic endosome membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anp32e acidic nuclear phosphoprotein 32 family member E is_active_in ISO (PMID:16420440) RGD PMID:16420440 NCBI chr 2:183,472,600...183,489,057
Ensembl chr 2:183,472,609...183,489,054 		JBrowse link
G Mkln1 muskelin 1 is_active_in
located_in		 ISO
IEA		 (PMID:21482357)
GO_REF:0000107		 RGD
Ensembl		 PMID:21482357 GO_REF:0000107 NCBI chr 4:59,815,912...60,124,047
Ensembl chr 4:60,002,464...60,123,993 		JBrowse link
postsynaptic recycling endosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akap5 A-kinase anchoring protein 5 located_in
is_active_in		 ISO (PMID:25589740)
(PMID:22623657)		 RGD PMID:22623657 PMID:25589740 NCBI chr 6:95,051,527...95,061,075
Ensembl chr 6:95,051,537...95,061,578 		JBrowse link
G Ap3m1 adaptor related protein complex 3 subunit mu 1 is_active_in
located_in		 ISO
IEA		 (PMID:27568566)
GO_REF:0000107		 RGD
Ensembl		 PMID:27568566 GO_REF:0000107 NCBI chr15:3,246,616...3,264,846
Ensembl chr15:3,246,926...3,264,844 		JBrowse link
G Rab11a RAB11a, member RAS oncogene family is_active_in ISO
IBA		 (PMID:26565907)
GO_REF:0000033		 RGD
GO_Central		 PMID:26565907 GO_REF:0000033 NCBI chr 8:65,223,698...65,246,461
Ensembl chr 8:65,222,949...65,246,525 		JBrowse link
G Snx27 sorting nexin 27 is_active_in
located_in		 ISO
IEA		 (PMID:24458027)
GO_REF:0000107		 RGD
Ensembl		 PMID:24458027 GO_REF:0000107 NCBI chr 2:182,135,904...182,218,906
Ensembl chr 2:182,135,905...182,218,906 		JBrowse link
G Stx12 syntaxin 12 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:145,062,978...145,092,423
Ensembl chr 5:145,063,587...145,092,377 		JBrowse link
G Vps26b VPS26 retromer complex component B is_active_in ISO (PMID:34965419) RGD PMID:34965419 NCBI chr 8:25,415,877...25,436,985
Ensembl chr 8:25,415,261...25,436,985 		JBrowse link
G Zdhhc2 zinc finger DHHC-type palmitoyltransferase 2 located_in
is_active_in		 ISS
ISO		 GO_REF:0000024
(PMID:25589740)		 UniProt
RGD		 PMID:25589740 GO_REF:0000024 NCBI chr16:51,808,465...51,878,060
Ensembl chr16:51,808,468...51,878,060 		JBrowse link
postsynaptic recycling endosome membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abhd17a abhydrolase domain containing 17A, depalmitoylase is_active_in IDA
IMP		 PMID:27307232 SynGO PMID:27307232 PMID:27307232 RGD:13441201, RGD:13441201 NCBI chr 7:9,124,332...9,132,762
Ensembl chr 7:9,124,332...9,130,762 		JBrowse link
G Abhd17b abhydrolase domain containing 17B, depalmitoylase is_active_in IMP
IDA		 PMID:27307232 SynGO PMID:27307232 PMID:27307232 RGD:13441201, RGD:13441201 NCBI chr 1:219,198,294...219,232,733
Ensembl chr 1:219,198,471...219,231,933 		JBrowse link
G Akap5 A-kinase anchoring protein 5 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 6:95,051,527...95,061,075
Ensembl chr 6:95,051,537...95,061,578 		JBrowse link
G Myo5b myosin Vb is_active_in IDA
IMP		 PMID:18984164 SynGO PMID:18984164 PMID:18984164 RGD:11533643, RGD:11533643 NCBI chr18:68,038,759...68,341,568
Ensembl chr18:68,038,759...68,338,745 		JBrowse link
G Rab11fip3 RAB11 family interacting protein 3 is_active_in ISO (PMID:24576489) RGD PMID:24576489 NCBI chr10:15,002,650...15,086,382
Ensembl chr10:15,002,926...15,118,479 		JBrowse link
G Stx12 syntaxin 12 is_active_in IDA PMID:17145503 SynGO PMID:17145503 RGD:155230783 NCBI chr 5:145,062,978...145,092,423
Ensembl chr 5:145,063,587...145,092,377 		JBrowse link
G Tfrc transferrin receptor is_active_in IDA PMID:17145503 SynGO PMID:17145503 RGD:155230783 NCBI chr11:68,163,413...68,185,257
Ensembl chr11:68,163,413...68,185,257 		JBrowse link
G Tmub1 transmembrane and ubiquitin-like domain containing 1 is_active_in IDA
IEP		 PMID:18665261 SynGO PMID:18665261 PMID:18665261 RGD:405650208, RGD:405650208 NCBI chr 4:10,729,494...10,732,060
Ensembl chr 4:10,729,250...10,732,060 		JBrowse link
G Zdhhc2 zinc finger DHHC-type palmitoyltransferase 2 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr16:51,808,465...51,878,060
Ensembl chr16:51,808,468...51,878,060 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 21321
    cellular anatomical structure 21026
      postsynapse 1055
        postsynaptic endosome 26
          postsynaptic early endosome + 5
          postsynaptic endosome membrane + 13
          postsynaptic recycling endosome + 13
Path 2
Term Annotations click to browse term
  cellular_component 21321
    cellular anatomical structure 21026
      organelle 14241
        membrane-bounded organelle 12806
          intracellular membrane-bounded organelle 12253
            intracellular vesicle 2073
              cytoplasmic vesicle 2064
                endosome 951
                  postsynaptic endosome 26
                    postsynaptic early endosome + 5
                    postsynaptic endosome membrane + 13
                    postsynaptic recycling endosome + 13
paths to the root