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ONTOLOGY REPORT - ANNOTATIONS

Term:postsynaptic endosome
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Accession:GO:0098845 term browser browse the term
Definition:An endosomal compartment that is part of the post-synapse. Only early and recycling endosomes are typically present in the postsynapse.


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postsynaptic endosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agap1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 is_active_in IDA PMID:27713690 SynGO PMID:27713690 RGD:405650302 NCBI chr 9:97,487,382...97,922,870
Ensembl chr 9:97,487,406...97,922,870 		JBrowse link
G Arc activity-regulated cytoskeleton-associated protein is_active_in IMP
IDA 		PMID:17088211 SynGO PMID:17088211 PMID:17088211 RGD:10047209, RGD:10047209 NCBI chr 7:108,444,959...108,448,413
Ensembl chr 7:108,444,692...108,451,220 		JBrowse link
G Clstn1 calsyntenin 1 is_active_in IEA
ISO 		GO_REF:0000107
(PMID:24966372) 		Ensembl
RGD		 PMID:24966372 GO_REF:0000107 NCBI chr 5:165,314,128...165,377,627
Ensembl chr 5:165,314,309...165,377,625 		JBrowse link
G Kif21b kinesin family member 21B is_active_in ISO (PMID:29949770) RGD PMID:29949770 NCBI chr13:50,127,842...50,177,822
Ensembl chr13:50,127,842...50,177,822 		JBrowse link
G Nsg1 neuronal vesicle trafficking associated 1 is_active_in IDA PMID:12070131 SynGO PMID:12070131 RGD:9850097 NCBI chr14:76,861,079...76,882,822
Ensembl chr14:76,860,746...76,883,390 		JBrowse link
G Pik3c3 phosphatidylinositol 3-kinase, catalytic subunit type 3 is_active_in IEA
ISO 		GO_REF:0000107
(PMID:35318705) 		Ensembl
RGD		 PMID:35318705 GO_REF:0000107 NCBI chr18:22,119,677...22,203,546
Ensembl chr18:22,119,792...22,203,539 		JBrowse link
G Sh3gl3 SH3 domain containing GRB2 like 3, endophilin A3 is_active_in IDA
IMP 		PMID:17088211 SynGO PMID:17088211 PMID:17088211 RGD:10047209, RGD:10047209 NCBI chr 1:145,533,728...145,664,881
Ensembl chr 1:145,533,728...145,664,881 		JBrowse link
extrinsic component of postsynaptic early endosome membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gripap1 GRIP1 associated protein 1 is_active_in IDA
IBA 		PMID:20098723
GO_REF:0000033 		GO_Central PMID:20098723 GO_REF:0000033, RGD:12050105 NCBI chr  X:17,350,817...17,380,626
Ensembl chr  X:17,350,819...17,380,588 		JBrowse link
extrinsic component of postsynaptic endosome membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Snx1 sorting nexin 1 is_active_in ISO (PMID:24261326) RGD PMID:24261326 NCBI chr 8:75,515,780...75,565,487
Ensembl chr 8:75,525,181...75,565,561 		JBrowse link
postsynaptic early endosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eea1 early endosome antigen 1 is_active_in IEA
ISO 		GO_REF:0000107
(PMID:17113235), (PMID:34564930) 		Ensembl
RGD		 PMID:17113235 PMID:34564930 GO_REF:0000107 NCBI chr 7:32,441,281...32,608,808
Ensembl chr 7:32,441,272...32,608,476 		JBrowse link
G Snx27 sorting nexin 27 is_active_in ISO (PMID:24458027) RGD PMID:24458027 NCBI chr 2:184,824,930...184,907,931
Ensembl chr 2:184,806,844...184,907,931 		JBrowse link
G Snx6 sorting nexin 6 is_active_in IEA
ISO 		GO_REF:0000107
(PMID:28134614) 		Ensembl
RGD		 PMID:28134614 GO_REF:0000107 NCBI chr 6:77,966,141...78,009,343
Ensembl chr 6:77,965,819...78,051,290 		JBrowse link
G Vps26b VPS26 retromer complex component B is_active_in IEA
ISO 		GO_REF:0000107
(PMID:34965419) 		Ensembl
RGD		 PMID:34965419 GO_REF:0000107 NCBI chr 8:33,675,025...33,696,132
Ensembl chr 8:33,675,025...33,696,132 		JBrowse link
postsynaptic endosome membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anp32e acidic nuclear phosphoprotein 32 family member E is_active_in ISO (PMID:16420440) RGD PMID:16420440 NCBI chr 2:186,161,520...186,177,984
Ensembl chr 2:186,161,532...186,177,986 		JBrowse link
G Mkln1 muskelin 1 is_active_in IEA
ISO 		GO_REF:0000107
(PMID:21482357) 		Ensembl
RGD		 PMID:21482357 GO_REF:0000107 NCBI chr 4:60,939,239...61,095,214
Ensembl chr 4:60,937,817...61,095,210 		JBrowse link
postsynaptic recycling endosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akap5 A-kinase anchoring protein 5 located_in
is_active_in 		ISO (PMID:25589740)
(PMID:22623657) 		RGD PMID:22623657 PMID:25589740 NCBI chr 6:100,787,169...100,796,712
Ensembl chr 6:100,790,148...100,796,620 		JBrowse link
G Ap3m1 adaptor related protein complex 3 subunit mu 1 is_active_in ISO (PMID:27568566) RGD PMID:27568566 NCBI chr15:3,285,591...3,314,139
Ensembl chr15:3,295,444...3,313,104 		JBrowse link
G Rab11a RAB11a, member RAS oncogene family is_active_in ISO
IEA
IBA 		(PMID:26565907)
GO_REF:0000107
GO_REF:0000033 		RGD
Ensembl
GO_Central		 PMID:26565907 GO_REF:0000033 GO_REF:0000107 NCBI chr 8:74,118,922...74,141,760
Ensembl chr 8:74,118,922...74,141,837 		JBrowse link
G Snx27 sorting nexin 27 is_active_in ISO (PMID:24458027) RGD PMID:24458027 NCBI chr 2:184,824,930...184,907,931
Ensembl chr 2:184,806,844...184,907,931 		JBrowse link
G Stx12 syntaxin 12 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:150,347,554...150,376,426
Ensembl chr 5:150,334,836...150,376,346 		JBrowse link
G Vps26b VPS26 retromer complex component B is_active_in IEA
ISO 		GO_REF:0000107
(PMID:34965419) 		Ensembl
RGD		 PMID:34965419 GO_REF:0000107 NCBI chr 8:33,675,025...33,696,132
Ensembl chr 8:33,675,025...33,696,132 		JBrowse link
G Zdhhc2 zinc finger DHHC-type palmitoyltransferase 2 located_in
is_active_in 		ISS
ISO
IEA 		GO_REF:0000024
(PMID:25589740)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:25589740 GO_REF:0000024 GO_REF:0000107 NCBI chr16:58,511,931...58,581,530
Ensembl chr16:58,511,934...58,581,516 		JBrowse link
postsynaptic recycling endosome membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abhd17a abhydrolase domain containing 17A, depalmitoylase is_active_in IDA
IMP 		PMID:27307232 SynGO PMID:27307232 PMID:27307232 RGD:13441201, RGD:13441201 NCBI chr 7:9,775,016...9,781,447 JBrowse link
G Abhd17b abhydrolase domain containing 17B, depalmitoylase is_active_in IMP
IDA 		PMID:27307232 SynGO PMID:27307232 PMID:27307232 RGD:13441201, RGD:13441201 NCBI chr 1:228,624,821...228,659,254
Ensembl chr 1:228,624,499...228,658,948 		JBrowse link
G Akap5 A-kinase anchoring protein 5 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 6:100,787,169...100,796,712
Ensembl chr 6:100,790,148...100,796,620 		JBrowse link
G Myo5b myosin Vb is_active_in IDA
IMP 		PMID:18984164 SynGO PMID:18984164 PMID:18984164 RGD:11533643, RGD:11533643 NCBI chr18:70,313,717...70,613,918
Ensembl chr18:70,311,990...70,613,918 		JBrowse link
G Rab11fip3 RAB11 family interacting protein 3 is_active_in IEA
ISO 		GO_REF:0000107
(PMID:24576489) 		Ensembl
RGD		 PMID:24576489 GO_REF:0000107 NCBI chr10:15,507,151...15,591,173
Ensembl chr10:15,507,151...15,591,173 		JBrowse link
G Stx12 syntaxin 12 is_active_in IDA PMID:17145503 SynGO PMID:17145503 RGD:155230783 NCBI chr 5:150,347,554...150,376,426
Ensembl chr 5:150,334,836...150,376,346 		JBrowse link
G Tfrc transferrin receptor is_active_in IDA PMID:17145503 SynGO PMID:17145503 RGD:155230783 NCBI chr11:81,668,478...81,690,318
Ensembl chr11:81,668,478...81,690,318 		JBrowse link
G Tmub1 transmembrane and ubiquitin-like domain containing 1 is_active_in IDA
IEP 		PMID:18665261 SynGO PMID:18665261 PMID:18665261 RGD:405650208, RGD:405650208 NCBI chr 4:11,621,931...11,624,497
Ensembl chr 4:11,621,508...11,624,499 		JBrowse link
G Zdhhc2 zinc finger DHHC-type palmitoyltransferase 2 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr16:58,511,931...58,581,530
Ensembl chr16:58,511,934...58,581,516 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 19485
    cellular anatomical structure 19353
      postsynapse 1064
        postsynaptic endosome 26
          postsynaptic early endosome + 5
          postsynaptic endosome membrane + 13
          postsynaptic recycling endosome + 13
Path 2
Term Annotations click to browse term
  cellular_component 19485
    cellular anatomical structure 19353
      organelle 13686
        membrane-bounded organelle 12471
          intracellular membrane-bounded organelle 11899
            intracellular vesicle 2180
              cytoplasmic vesicle 2171
                endosome 991
                  postsynaptic endosome 26
                    postsynaptic early endosome + 5
                    postsynaptic endosome membrane + 13
                    postsynaptic recycling endosome + 13
paths to the root