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ONTOLOGY REPORT - ANNOTATIONS

Term:presynaptic active zone cytoplasmic component
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Accession:GO:0098831 term browser browse the term
Definition:A specialized region below the presynaptic membrane, characterized by electron-dense material, a specialized cytoskeletal matrix and accumulated (associated) synaptic vesicles.
Synonyms:exact_synonym: cortex of presynaptic active zone;   presynaptic zone cortex


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presynaptic active zone cytoplasmic component term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bsn bassoon (presynaptic cytomatrix protein) is_active_in IDA PMID:10340516
PMID:9679147		 SynGO PMID:10340516 PMID:9679147 RGD:13702152, RGD:69780 NCBI chr 8:108,784,849...108,875,819
Ensembl chr 8:108,788,542...108,875,819 		JBrowse link
G Ctbp1 C-terminal binding protein 1 located_in
is_active_in		 IEA
ISO		 GO_REF:0000107
(PMID:22745816)		 Ensembl
RGD		 PMID:22745816 GO_REF:0000107 NCBI chr14:77,455,580...77,482,821
Ensembl chr14:77,455,696...77,482,821 		JBrowse link
G Ctbp2 C-terminal binding protein 2 is_active_in ISO (PMID:15728193), (PMID:22745816) RGD PMID:15728193 PMID:22745816 NCBI chr 1:187,782,064...187,918,115
Ensembl chr 1:187,782,682...187,920,222 		JBrowse link
G Ctnna2 catenin alpha 2 is_active_in ISO (PMID:8909549) RGD PMID:8909549 NCBI chr 4:109,294,249...110,443,409
Ensembl chr 4:109,293,978...110,443,522 		JBrowse link
G Ctnnb1 catenin beta 1 located_in
is_active_in		 IEA
ISO		 GO_REF:0000107
(PMID:8909549)		 Ensembl
RGD		 PMID:8909549 GO_REF:0000107 NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111 		JBrowse link
G Ctnnd1 catenin delta 1 is_active_in IDA PMID:12727444 SynGO PMID:12727444 RGD:2316208 NCBI chr 3:69,683,328...69,734,550
Ensembl chr 3:69,683,313...69,734,516 		JBrowse link
G Erc1 ELKS/RAB6-interacting/CAST family member 1 is_active_in IDA
IBA		 PMID:12391317
GO_REF:0000033		 GO_Central PMID:12391317 GO_REF:0000033, RGD:632516 NCBI chr 4:152,763,664...153,055,724
Ensembl chr 4:152,767,419...153,055,639 		JBrowse link
G Erc2 ELKS/RAB6-interacting/CAST family member 2 is_active_in
located_in		 IDA
ISO
IEA
IBA		 PMID:12391317
(PMID:29439199)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:29439199 PMID:12391317 GO_REF:0000033 GO_REF:0000107, RGD:632516 NCBI chr16:2,812,712...3,673,624
Ensembl chr16:2,848,620...3,670,776 		JBrowse link
G Gucy1b1 guanylate cyclase 1 soluble subunit beta 1 is_active_in IDA PMID:12388603 SynGO PMID:12388603 RGD:12050093 NCBI chr 2:167,348,824...167,398,983
Ensembl chr 2:167,348,825...167,398,916 		JBrowse link
G Iqsec2 IQ motif and Sec7 domain ArfGEF 2 is_active_in ISO (PMID:19811534) RGD PMID:19811534 NCBI chr  X:21,254,799...21,337,179
Ensembl chr  X:21,254,914...21,336,584 		JBrowse link
G Nr3c2 nuclear receptor subfamily 3, group C, member 2 is_active_in IDA PMID:21179518 SynGO PMID:21179518 RGD:4892203 NCBI chr19:30,715,634...31,059,885
Ensembl chr19:30,715,648...31,059,885 		JBrowse link
G Osbpl2 oxysterol binding protein-like 2 located_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 3:167,210,945...167,256,219
Ensembl chr 3:167,210,832...167,256,219 		JBrowse link
G Pclo piccolo (presynaptic cytomatrix protein) is_active_in IDA PMID:21712437
PMID:31959215		 SynGO PMID:21712437 PMID:31959215 RGD:9850098, RGD:155230771 NCBI chr 4:19,691,439...20,050,015
Ensembl chr 4:19,695,315...20,049,885 		JBrowse link
G Ppfia3 PTPRF interacting protein alpha 3 located_in
is_active_in		 IEA
ISO		 GO_REF:0000107
(PMID:29439199)		 Ensembl
RGD		 PMID:29439199 GO_REF:0000107 NCBI chr 1:95,817,110...95,845,950
Ensembl chr 1:95,817,110...95,845,798 		JBrowse link
G Rimbp2 RIMS binding protein 2 is_active_in ISO (PMID:27671655) RGD PMID:27671655 NCBI chr12:27,747,615...27,946,256
Ensembl chr12:27,747,980...27,956,763 		JBrowse link
G Rims1 regulating synaptic membrane exocytosis 1 is_active_in IDA
ISO
IBA		 PMID:9252191
PMID:27462810
(PMID:27537483)
GO_REF:0000033		 RGD
GO_Central		 PMID:27537483 PMID:9252191 PMID:27462810 GO_REF:0000033, RGD:633897, RGD:13702367 NCBI chr 9:24,696,959...25,196,404
Ensembl chr 9:24,698,854...25,196,631 		JBrowse link
G Rims2 regulating synaptic membrane exocytosis 2 is_active_in IDA
IBA		 PMID:9252191
GO_REF:0000033		 GO_Central PMID:9252191 GO_REF:0000033, RGD:633897 NCBI chr 7:70,248,104...70,759,134
Ensembl chr 7:70,243,872...70,757,491 		JBrowse link
G Rims3 regulating synaptic membrane exocytosis 3 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:134,429,092...134,468,935
Ensembl chr 5:134,435,829...134,640,489 		JBrowse link
G Stxbp1 syntaxin binding protein 1 is_active_in ISO (PMID:32494600) RGD PMID:32494600 NCBI chr 3:16,076,725...16,138,431
Ensembl chr 3:16,076,391...16,138,369 		JBrowse link
cytoskeleton of presynaptic active zone term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bsn bassoon (presynaptic cytomatrix protein) is_active_in
located_in		 IDA
IBA		 GO_REF:0000033
PMID:9679147		 GO_Central
RGD		 PMID:11596050 PMID:9679147 GO_REF:0000033, RGD:9850129, RGD:69780 NCBI chr 8:108,784,849...108,875,819
Ensembl chr 8:108,788,542...108,875,819 		JBrowse link
G Pclo piccolo (presynaptic cytomatrix protein) is_active_in IDA
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:11596050 GO_REF:0000033, RGD:9850129 NCBI chr 4:19,691,439...20,050,015
Ensembl chr 4:19,695,315...20,049,885 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 21321
    cellular anatomical structure 21026
      presynaptic active zone 137
        presynaptic active zone cytoplasmic component 19
          cytoskeleton of presynaptic active zone + 2
Path 2
Term Annotations click to browse term
  cellular_component 21321
    cellular anatomical structure 21026
      cell junction 2598
        synapse 1998
          presynapse 895
            presynaptic active zone 137
              presynaptic active zone cytoplasmic component 19
                cytoskeleton of presynaptic active zone + 2
paths to the root