Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

ONTOLOGY REPORT - ANNOTATIONS

Term:lumenal side of endoplasmic reticulum membrane
go back to main search page
Accession:GO:0098553 term browser browse the term
Definition:The side (leaflet) of the plasma membrane that faces the lumen.


show annotations for term's descendants           Sort by:
lumenal side of endoplasmic reticulum membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07044383.1 located_in IEA GO_REF:0000117 UniProt GO_REF:0000117 Ensembl chr20:3,403,777...3,436,874 JBrowse link
G AABR07044397.1 located_in IEA GO_REF:0000117 UniProt GO_REF:0000117 Ensembl chr20:2,496,605...2,497,428 JBrowse link
G ENSRNOG00000064836 located_in IEA GO_REF:0000117 UniProt GO_REF:0000117 Ensembl chr20:2,606,621...2,618,153 JBrowse link
G Hm13 histocompatibility minor 13 located_in
is_active_in		 ISO
IBA		 (PMID:15385547)
GO_REF:0000033		 RGD
GO_Central		 PMID:15385547 GO_REF:0000033 NCBI chr 3:141,145,792...141,183,557
Ensembl chr 3:141,145,782...141,184,703 		JBrowse link
G Mcts2 MCTS family member 2 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:141,163,330...141,164,108 JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel located_in ISO (PMID:21044049) RGD PMID:21044049 NCBI chr14:5,237,135...5,280,455
Ensembl chr14:5,237,135...5,280,825 		JBrowse link
G RT1-A RT1 class I, locus A located_in IEA GO_REF:0000117 UniProt GO_REF:0000117
G RT1-CE1 RT1 class I, locus1 located_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr20:3,555,779...3,559,487
Ensembl chr20:3,555,782...3,559,486 		JBrowse link
G RT1-CE10 RT1 class I, locus CE10 located_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr20:3,377,284...3,380,301 JBrowse link
G RT1-CE11 RT1 class I, locus CE11 located_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr20:3,355,393...3,358,520
Ensembl chr20:3,350,937...3,380,362 		JBrowse link
G RT1-CE12 RT1 class I, locus CE12 located_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr20:3,338,907...3,342,547 JBrowse link
G RT1-CE14 RT1 class I, locus CE14 located_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr20:3,296,654...3,300,795
Ensembl chr20:3,297,196...3,305,134 		JBrowse link
G RT1-CE16 RT1 class I, locus CE16 located_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr20:3,257,109...3,260,747
Ensembl chr20:3,257,123...3,279,563 		JBrowse link
G RT1-CE2 RT1 class I, locus CE2 located_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr20:3,538,452...3,541,841
Ensembl chr20:3,537,809...3,541,790 		JBrowse link
G Rt1-ec3 RT1 class I, locus EC3 located_in IEA GO_REF:0000117 UniProt GO_REF:0000117 Ensembl chr20:3,310,825...3,421,372 JBrowse link
G RT1-O1l1 RT1 class Ib, locus O1 like 1 located_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr20:2,624,073...2,658,023
Ensembl chr20:2,623,953...2,692,081 		JBrowse link
G RT1-S2 RT1 class Ib, locus S2 located_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr20:2,650,233...2,651,654
Ensembl chr20:2,649,964...2,652,027 		JBrowse link
G RT1-T24-4 RT1 class I, locus T24, gene 4 located_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr20:2,684,515...2,747,878
Ensembl chr20:2,684,515...2,692,511
Ensembl chr20:2,684,515...2,692,511 		JBrowse link
G Sppl2a signal peptide peptidase-like 2A located_in
is_active_in		 ISO
IBA		 (PMID:15385547)
GO_REF:0000033		 RGD
GO_Central		 PMID:15385547 GO_REF:0000033 NCBI chr 3:114,149,337...114,193,408
Ensembl chr 3:114,151,069...114,193,264 		JBrowse link
G Sppl2b signal peptide peptidase-like 2B located_in
is_active_in		 ISS
ISO
IEA
IBA		 GO_REF:0000024
(PMID:15385547)
GO_REF:0000107
GO_REF:0000033		 UniProt
RGD
Ensembl
GO_Central		 PMID:15385547 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 7:8,843,918...8,856,642
Ensembl chr 7:8,843,918...8,856,608 		JBrowse link
G Sppl2c signal peptide peptidase like 2C located_in
is_active_in		 ISO
IBA		 (PMID:15385547)
GO_REF:0000033		 RGD
GO_Central		 PMID:15385547 GO_REF:0000033 NCBI chr10:89,095,279...89,097,487
Ensembl chr10:89,095,261...89,098,580 		JBrowse link
G Sppl3 signal peptide peptidase like 3 located_in
is_active_in		 ISO
IBA		 (PMID:15385547)
GO_REF:0000033		 RGD
GO_Central		 PMID:15385547 GO_REF:0000033 NCBI chr12:41,515,635...41,600,079
Ensembl chr12:41,515,640...41,600,126 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 21321
    cellular anatomical structure 21026
      side of membrane 824
        lumenal side of membrane 33
          lumenal side of endoplasmic reticulum membrane 22
            lumenal side of rough endoplasmic reticulum membrane 0
            lumenal side of smooth endoplasmic reticulum membrane 0
Path 2
Term Annotations click to browse term
  cellular_component 21321
    cellular anatomical structure 21026
      intracellular anatomical structure 15547
        intracellular organelle 13828
          intracellular membrane-bounded organelle 12253
            endoplasmic reticulum 1893
              endoplasmic reticulum subcompartment 1114
                endoplasmic reticulum membrane 1104
                  lumenal side of endoplasmic reticulum membrane 22
                    lumenal side of rough endoplasmic reticulum membrane 0
                    lumenal side of smooth endoplasmic reticulum membrane 0
paths to the root