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ONTOLOGY REPORT - ANNOTATIONS

Term:detection of other organism
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Accession:GO:0098543 term browser browse the term
Definition:The series of events in which a stimulus from another organism is received and converted into a molecular signal.
Synonyms:narrow_synonym: recognition of other organism during symbiotic interaction;   recognition of other organism involved in symbiotic interaction
 alt_id: GO:0051824


show annotations for term's descendants           Sort by:
detection of bacterial lipoprotein term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ssc5d scavenger receptor cysteine rich family member with 5 domains involved_in IBA
IEA
ISO		 GO_REF:0000033
GO_REF:0000107
(PMID:21217009)		 GO_Central
Ensembl
RGD		 PMID:21217009 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:68,891,942...68,910,462
Ensembl chr 1:68,891,949...68,909,743 		JBrowse link
detection of bacterium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clec4m C-type lectin domain family 4 member M acts_upstream_of_or_within ISO
IEA		 (PMID:14707091)
GO_REF:0000107		 RGD
Ensembl		 PMID:14707091 GO_REF:0000107 NCBI chr12:6,713,795...6,722,414
Ensembl chr12:1,915,919...1,924,539 		JBrowse link
G Naip5 NLR family, apoptosis inhibitory protein 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:31,557,706...31,608,722
Ensembl chr 2:31,557,817...31,608,634 		JBrowse link
G Naip6 NLR family, apoptosis inhibitory protein 6 involved_in IBA
ISO		 GO_REF:0000033
(PMID:21874021)		 GO_Central
RGD		 PMID:21874021 GO_REF:0000033 NCBI chr 2:33,241,520...33,293,184
Ensembl chr 2:31,507,424...31,570,542 		JBrowse link
G Nlrc4 NLR family, CARD domain containing 4 involved_in ISO
IEA
IBA
ISS		 (PMID:15107016)
GO_REF:0000107
(PMID:22885697)
GO_REF:0000033
GO_REF:0000024		 RGD
Ensembl
GO_Central
UniProt		 PMID:15107016 PMID:22885697 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 6:26,743,658...26,771,783
Ensembl chr 6:20,995,266...21,018,248 		JBrowse link
G Nod1 nucleotide-binding oligomerization domain containing 1 involved_in ISO
IEA		 (PMID:15653568)
GO_REF:0000107		 RGD
Ensembl		 PMID:15653568 GO_REF:0000107 NCBI chr 4:85,391,142...85,442,281
Ensembl chr 4:84,060,880...84,111,404 		JBrowse link
G Nod2 nucleotide-binding oligomerization domain containing 2 involved_in ISO
IEA		 (PMID:15653568)
GO_REF:0000107		 RGD
Ensembl		 PMID:15653568 GO_REF:0000107 NCBI chr19:34,555,832...34,596,281
Ensembl chr19:18,382,439...18,417,177 		JBrowse link
G Parg poly (ADP-ribose) glycohydrolase acts_upstream_of_or_within ISO MGI:3052740 (PMID:15282315) RGD PMID:15282315 NCBI chr16:7,442,696...7,550,585
Ensembl chr16:7,436,476...7,544,273 		JBrowse link
G Pglyrp1 peptidoglycan recognition protein 1 involved_in ISO (PMID:11461926) RGD PMID:11461926 NCBI chr 1:87,659,863...87,665,048
Ensembl chr 1:78,531,815...78,537,001 		JBrowse link
G Pglyrp2 peptidoglycan recognition protein 2 involved_in ISO
IEA		 (PMID:11461926)
GO_REF:0000107		 RGD
Ensembl		 PMID:11461926 GO_REF:0000107 NCBI chr 7:12,069,414...12,082,437
Ensembl chr 7:11,418,880...11,427,773 		JBrowse link
G Pglyrp3 peptidoglycan recognition protein 3 involved_in ISO (PMID:11461926) RGD PMID:11461926 NCBI chr 2:180,174,931...180,186,007
Ensembl chr 2:177,477,407...177,490,736
Ensembl chr 2:177,477,407...177,490,736 		JBrowse link
G Pglyrp4 peptidoglycan recognition protein 4 involved_in ISO
IEA		 (PMID:11461926)
GO_REF:0000107		 RGD
Ensembl		 PMID:11461926 GO_REF:0000107 NCBI chr 2:178,500,238...178,669,328
Ensembl chr 2:176,218,519...176,242,251 		JBrowse link
detection of diacyl bacterial lipopeptide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tlr2 toll-like receptor 2 acts_upstream_of_or_within ISO (PMID:19931471) RGD PMID:19931471 NCBI chr 2:171,499,189...171,504,831
Ensembl chr 2:169,197,419...169,206,630 		JBrowse link
G Tlr6 toll-like receptor 6 acts_upstream_of_or_within ISO
IEA		 (PMID:19931471)
GO_REF:0000107		 RGD
Ensembl		 PMID:19931471 GO_REF:0000107 NCBI chr14:43,715,809...43,727,019
Ensembl chr14:43,362,164...43,375,685 		JBrowse link
detection of fungus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clec7a C-type lectin domain containing 7A involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 4:164,588,737...164,599,953
Ensembl chr 4:162,902,732...162,913,897 		JBrowse link
detection of triacyl bacterial lipopeptide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tlr1 toll-like receptor 1 acts_upstream_of_or_within ISO
IEA		 (PMID:19931471)
GO_REF:0000107		 RGD
Ensembl		 PMID:19931471 GO_REF:0000107 NCBI chr14:43,737,761...43,750,389
Ensembl chr14:43,384,932...43,397,125 		JBrowse link
G Tlr2 toll-like receptor 2 acts_upstream_of_or_within ISO (PMID:19931471) RGD PMID:19931471 NCBI chr 2:171,499,189...171,504,831
Ensembl chr 2:169,197,419...169,206,630 		JBrowse link
detection of yeast term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clec4a C-type lectin domain family 4, member A involved_in ISO (PMID:22041900) RGD PMID:22041900 NCBI chr 4:158,026,138...158,119,904
Ensembl chr 4:156,414,688...156,432,402 		JBrowse link
G Clec4m C-type lectin domain family 4 member M acts_upstream_of_or_within ISO
IEA		 (PMID:14707091)
GO_REF:0000107		 RGD
Ensembl		 PMID:14707091 GO_REF:0000107 NCBI chr12:6,713,795...6,722,414
Ensembl chr12:1,915,919...1,924,539 		JBrowse link
G Clec6a-ps1 C-type lectin domain family 6, member A, pseudogene 1 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 4:158,225,100...158,244,722
Ensembl chr 4:156,539,408...156,558,605
Ensembl chr 4:156,539,408...156,558,605 		JBrowse link
G Clec7a C-type lectin domain containing 7A acts_upstream_of_or_within
involved_in		 ISO (PMID:14698225)
(PMID:19136564)		 RGD PMID:14698225 PMID:19136564 NCBI chr 4:164,588,737...164,599,953
Ensembl chr 4:162,902,732...162,913,897 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20558
    biological process involved in interspecies interaction between organisms 2011
      response to other organism 1890
        detection of other organism 18
          detection of bacterium + 15
          detection of fungus + 4
          detection of insect 0
          detection of nematode 0
          detection of oomycetes 0
          detection of protozoan 0
          detection of symbiont + 0
Path 2
Term Annotations click to browse term
  biological_process 20558
    response to stimulus 11067
      response to external stimulus 2804
        response to external biotic stimulus 1894
          response to other organism 1890
            detection of other organism 18
              detection of bacterium + 15
              detection of fungus + 4
              detection of insect 0
              detection of nematode 0
              detection of oomycetes 0
              detection of protozoan 0
              detection of symbiont + 0
paths to the root