Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

ONTOLOGY REPORT - ANNOTATIONS

Term:9+0 non-motile cilium
go back to main search page
Accession:GO:0097731 term browser browse the term
Definition:A non-motile cilium where the axoneme has a ring of nine outer microtubule doublets but no central microtubules (and is therefore called a 9+0 axoneme).
Comment:This type of cilia may be present in solitary (authentic primary cilia in many cell types) or in multiple copies (e.g. in Grueneberg ganglion neurons).
Synonyms:exact_synonym: 9+0 immotile cilium
 narrow_synonym: primary cilium


show annotations for term's descendants           Sort by:
9+0 non-motile cilium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C13h1orf115 similar to human chromosome 1 open reading frame 115 located_in ISO (PMID:29257953) RGD PMID:29257953 NCBI chr13:96,422,308...96,432,044
Ensembl chr13:96,422,302...96,432,068 		JBrowse link
G Cfap96 cilia and flagella associated protein 96 located_in ISO (PMID:29257953) RGD PMID:29257953 NCBI chr16:46,291,075...46,315,616
Ensembl chr16:46,291,311...46,315,625 		JBrowse link
G Dynll2 dynein light chain LC8-type 2 located_in ISO (PMID:29257953) RGD PMID:29257953 NCBI chr10:72,767,035...72,785,824
Ensembl chr10:72,767,035...72,785,805 		JBrowse link
G Enkd1 enkurin domain containing 1 located_in ISO (PMID:29257953) RGD PMID:29257953 NCBI chr19:33,592,074...33,596,552
Ensembl chr19:33,592,078...33,596,545 		JBrowse link
G Ift80 intraflagellar transport 80 is_active_in ISO (PMID:26996322) RGD PMID:26996322 NCBI chr 2:153,144,707...153,240,024
Ensembl chr 2:153,145,795...153,240,024 		JBrowse link
G Iftap intraflagellar transport associated protein is_active_in
located_in		 IBA
ISO		 GO_REF:0000033
(PMID:26703212)		 GO_Central
RGD		 PMID:26703212 GO_REF:0000033 NCBI chr 3:87,812,068...87,906,517
Ensembl chr 3:87,817,408...87,906,547 		JBrowse link
G Phyh phytanoyl-CoA 2-hydroxylase located_in ISO (PMID:29257953) RGD PMID:29257953 NCBI chr17:73,329,461...73,346,359
Ensembl chr17:73,329,082...73,346,409 		JBrowse link
G Pkhd1 PKHD1 ciliary IPT domain containing fibrocystin/polyductin located_in ISO (PMID:24586199) RGD PMID:24586199 NCBI chr 9:22,547,396...23,037,443
Ensembl chr 9:22,549,513...23,037,381 		JBrowse link
G Smo smoothened, frizzled class receptor located_in IEA
ISO		 GO_REF:0000107
(PMID:26996322)		 Ensembl
RGD		 PMID:26996322 GO_REF:0000107 NCBI chr 4:58,343,626...58,373,823
Ensembl chr 4:58,343,529...58,373,829 		JBrowse link
G Ttll4 tubulin tyrosine ligase like 4 located_in ISO (PMID:17499049) RGD PMID:17499049 NCBI chr 9:76,221,659...76,258,219
Ensembl chr 9:76,221,796...76,251,301 		JBrowse link
G Ttll5 tubulin tyrosine ligase like 5 located_in ISO (PMID:17499049) RGD PMID:17499049 NCBI chr 6:105,483,091...105,700,920
Ensembl chr 6:105,483,191...105,700,934 		JBrowse link
G Ttll6 tubulin tyrosine ligase like 6 located_in ISO (PMID:17499049) RGD PMID:17499049 NCBI chr10:81,081,985...81,118,009
Ensembl chr10:81,091,975...81,127,234 		JBrowse link
G Ttll7 tubulin tyrosine ligase like 7 located_in ISO (PMID:17499049) RGD PMID:17499049 NCBI chr 2:235,765,786...235,889,047
Ensembl chr 2:235,765,835...235,885,047 		JBrowse link
G Tulp3 TUB like protein 3 located_in ISO (PMID:20889716) RGD PMID:20889716 NCBI chr 4:161,590,478...161,632,244
Ensembl chr 4:161,590,479...161,632,149 		JBrowse link
cone photoreceptor outer segment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cnga3 cyclic nucleotide gated channel subunit alpha 3 located_in ISO (PMID:10813773) RGD PMID:10813773 NCBI chr 9:39,447,534...39,494,044
Ensembl chr 9:39,448,034...39,493,183 		JBrowse link
G Guca1a guanylate cyclase activator 1A located_in
is_active_in		 ISO
IBA		 (PMID:9620085)
GO_REF:0000033		 RGD
GO_Central		 PMID:9620085 GO_REF:0000033 NCBI chr 9:13,588,988...13,598,566
Ensembl chr 9:13,588,525...13,598,565 		JBrowse link
G Guca1b guanylate cyclase activator 1B located_in
is_active_in		 ISO
IBA		 (PMID:9620085)
GO_REF:0000033		 RGD
GO_Central		 PMID:9620085 GO_REF:0000033 NCBI chr 9:13,599,619...13,607,455
Ensembl chr 9:13,599,619...13,607,455 		JBrowse link
G Ift140 intraflagellar transport 140 located_in ISO (PMID:24619649) RGD PMID:24619649 NCBI chr10:14,032,665...14,121,682
Ensembl chr10:14,032,648...14,120,433 		JBrowse link
G Opn1sw opsin 1, short wave sensitive located_in IEA
ISO		 GO_REF:0000107
(PMID:10813773)		 Ensembl
RGD		 PMID:10813773 GO_REF:0000107 NCBI chr 4:57,977,317...57,980,457
Ensembl chr 4:57,977,313...57,980,457 		JBrowse link
G Pcare photoreceptor cilium actin regulator located_in ISO (PMID:25616964) RGD PMID:25616964 NCBI chr 6:23,749,700...23,758,424
Ensembl chr 6:23,749,757...23,758,169 		JBrowse link
G Prkca protein kinase C, alpha located_in ISO (PMID:10813773) RGD PMID:10813773 NCBI chr10:92,889,390...93,288,013
Ensembl chr10:92,894,012...93,288,012 		JBrowse link
G Rd3 RD3 regulator of GUCY2D located_in ISO (PMID:21078983) RGD PMID:21078983 NCBI chr13:103,551,823...103,562,925
Ensembl chr13:103,552,857...103,562,622 		JBrowse link
G Slc24a4 solute carrier family 24 member 4 located_in ISO (PMID:28650316) RGD PMID:28650316 NCBI chr 6:121,279,590...121,419,811
Ensembl chr 6:121,280,031...121,414,949 		JBrowse link
G Tmem237 transmembrane protein 237 located_in ISO (PMID:20375344) RGD PMID:20375344 NCBI chr 9:60,533,348...60,569,253
Ensembl chr 9:60,535,233...60,572,567 		JBrowse link
photoreceptor cell cilium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp1a4 ATPase Na+/K+ transporting subunit alpha 4 located_in ISO (PMID:26373354) RGD PMID:26373354 NCBI chr13:84,683,766...84,719,790
Ensembl chr13:84,683,768...84,719,687 		JBrowse link
G Cfap410 cilia and flagella associated protein 410 located_in ISO (PMID:29899041) RGD PMID:29899041 NCBI chr20:10,687,863...10,694,736
Ensembl chr20:10,687,863...10,694,737 		JBrowse link
G Fam161a FAM161 centrosomal protein A located_in ISO (PMID:22791751) RGD PMID:22791751 NCBI chr14:97,009,449...97,027,865
Ensembl chr14:97,009,491...97,028,588 		JBrowse link
G Ift52 intraflagellar transport 52 located_in ISO (PMID:29899041) RGD PMID:29899041 NCBI chr 3:151,672,505...151,696,975
Ensembl chr 3:151,672,493...151,696,980 		JBrowse link
G Pex6 peroxisomal biogenesis factor 6 located_in ISO
ISS		 (PMID:26593283)
GO_REF:0000024		 RGD
UniProt		 PMID:26593283 GO_REF:0000024 NCBI chr 9:14,258,145...14,270,335
Ensembl chr 9:14,258,145...14,270,303 		JBrowse link
G Rp1 RP1, axonemal microtubule associated located_in ISO (PMID:29899041) RGD PMID:29899041 NCBI chr 5:15,121,104...15,582,363
Ensembl chr 5:15,121,133...15,579,363 		JBrowse link
G Sdccag8 SHH signaling and ciliogenesis regulator SDCCAG8 located_in ISO (PMID:29899041) RGD PMID:29899041 NCBI chr13:88,754,521...88,979,363
Ensembl chr13:88,754,626...89,097,111 		JBrowse link
G Ush1g USH1 protein network component sans located_in ISO (PMID:31637240) RGD PMID:31637240 NCBI chr10:100,559,721...100,563,590
Ensembl chr10:100,557,629...100,563,590 		JBrowse link
photoreceptor connecting cilium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AC131360.2 located_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 Ensembl chr18:29,185,443...29,187,845 JBrowse link
G Adgrv1 adhesion G protein-coupled receptor V1 located_in ISO (PMID:17906286) RGD PMID:17906286 NCBI chr 2:11,331,434...11,911,713
Ensembl chr 2:11,331,442...11,911,688 		JBrowse link
G Alpk1 alpha-kinase 1 located_in ISO (PMID:30967659) RGD PMID:30967659 NCBI chr 2:216,126,939...216,247,180
Ensembl chr 2:216,128,825...216,247,157 		JBrowse link
G Arl3 ARF like GTPase 3 located_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:12417528)		 UniProt
Ensembl
RGD		 PMID:12417528 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:245,400,659...245,446,673
Ensembl chr 1:245,400,550...245,446,820 		JBrowse link
G Bbs4 Bardet-Biedl syndrome 4 located_in ISO (PMID:23943788) RGD PMID:23943788 NCBI chr 8:59,731,912...59,765,408
Ensembl chr 8:59,731,912...59,765,607 		JBrowse link
G Cep290 centrosomal protein 290 located_in ISO (PMID:16632484), (PMID:16682973), (PMID:23943788) RGD PMID:16632484 PMID:16682973 PMID:23943788 NCBI chr 7:35,310,071...35,399,388
Ensembl chr 7:35,310,199...35,399,392 		JBrowse link
G Cetn1 centrin 1 located_in ISO (PMID:15347651), (PMID:30120214) RGD PMID:15347651 PMID:30120214 NCBI chr18:651,591...652,293
Ensembl chr18:651,591...652,293 		JBrowse link
G Cetn2 centrin 2 located_in ISO (PMID:15347651) RGD PMID:15347651 NCBI chr  X:150,769,944...150,774,833
Ensembl chr  X:150,769,953...150,774,919 		JBrowse link
G Cetn3 centrin 3 located_in ISO (PMID:15347651), (PMID:22031837), (PMID:24833722) RGD PMID:15347651 PMID:22031837 PMID:24833722 NCBI chr 2:12,089,025...12,101,828
Ensembl chr 2:12,089,226...12,101,828 		JBrowse link
G Cfap410 cilia and flagella associated protein 410 located_in ISO (PMID:26974433) RGD PMID:26974433 NCBI chr20:10,687,863...10,694,736
Ensembl chr20:10,687,863...10,694,737 		JBrowse link
G Fam161a FAM161 centrosomal protein A located_in
is_active_in		 IDA
ISO
IBA
IEA		 PMID:22940612
(PMID:22791751), (PMID:22940612), (PMID:24833722)
GO_REF:0000033
GO_REF:0000107
(PMID:22940612)		 RGD
GO_Central
Ensembl		 PMID:22791751 PMID:22940612 PMID:24833722 PMID:22940612 GO_REF:0000033 GO_REF:0000107, RGD:8553427 NCBI chr14:97,009,449...97,027,865
Ensembl chr14:97,009,491...97,028,588 		JBrowse link
G Gnat1 G protein subunit alpha transducin 1 located_in ISO (PMID:17881533) RGD PMID:17881533 NCBI chr 8:108,350,935...108,355,671
Ensembl chr 8:108,350,935...108,355,671 		JBrowse link
G Ift122 intraflagellar transport 122 located_in ISO (PMID:19208653) RGD PMID:19208653 NCBI chr 4:148,905,031...148,975,458
Ensembl chr 4:148,905,046...148,975,458 		JBrowse link
G Ift140 intraflagellar transport 140 located_in ISO (PMID:20368623), (PMID:24619649) RGD PMID:20368623 PMID:24619649 NCBI chr10:14,032,665...14,121,682
Ensembl chr10:14,032,648...14,120,433 		JBrowse link
G Ift20 intraflagellar transport 20 located_in ISO (PMID:31637240)
(PMID:21307337)		 RGD PMID:21307337 PMID:31637240 NCBI chr10:63,432,597...63,438,125
Ensembl chr10:63,432,633...63,438,124 		JBrowse link
G Ift52 intraflagellar transport 52 located_in ISO (PMID:31637240)
(PMID:20368623)		 RGD PMID:20368623 PMID:31637240 NCBI chr 3:151,672,505...151,696,975
Ensembl chr 3:151,672,493...151,696,980 		JBrowse link
G Ift57 intraflagellar transport 57 located_in ISO (PMID:31637240)
(PMID:20368623)		 RGD PMID:20368623 PMID:31637240 NCBI chr11:51,051,520...51,124,909
Ensembl chr11:51,059,611...51,124,812 		JBrowse link
G Ift88 intraflagellar transport 88 located_in ISO (PMID:19208653), (PMID:20368623) RGD PMID:19208653 PMID:20368623 NCBI chr15:31,573,325...31,666,068
Ensembl chr15:31,573,376...31,672,147 		JBrowse link
G Iqcb1 IQ motif containing B1 located_in ISO (PMID:15723066) RGD PMID:15723066 NCBI chr11:63,905,595...63,960,141
Ensembl chr11:63,905,590...63,960,093 		JBrowse link
G Kiaa1549 KIAA1549 homolog located_in ISO (PMID:30120214) RGD PMID:30120214 NCBI chr 4:66,840,674...66,968,407
Ensembl chr 4:66,760,162...66,968,436 		JBrowse link
G Kif17 kinesin family member 17 located_in ISO (PMID:19384852) RGD PMID:19384852 NCBI chr 5:150,482,288...150,521,471
Ensembl chr 5:150,481,578...150,519,638 		JBrowse link
G Kif3a kinesin family member 3a located_in ISO (PMID:19208653) RGD PMID:19208653 NCBI chr10:37,725,930...37,761,183
Ensembl chr10:37,725,970...37,759,191 		JBrowse link
G Kifap3 kinesin-associated protein 3 located_in ISO (PMID:19384852) RGD PMID:19384852 NCBI chr13:76,127,702...76,264,654
Ensembl chr13:76,127,696...76,264,650 		JBrowse link
G Lca5 lebercilin LCA5 located_in ISO
IDA		 (PMID:21606596)
PMID:17546029		 RGD PMID:21606596 PMID:17546029 RGD:14397561 NCBI chr 8:84,307,696...84,375,025
Ensembl chr 8:84,317,659...84,374,956 		JBrowse link
G Mak male germ cell-associated kinase located_in IEA
ISO		 GO_REF:0000107
(PMID:21148103)		 Ensembl
RGD		 PMID:21148103 GO_REF:0000107 NCBI chr17:23,683,753...23,731,125
Ensembl chr17:23,693,878...23,730,001 		JBrowse link
G Myo7a myosin VIIA located_in ISO (PMID:10414956) RGD PMID:10414956 NCBI chr 1:152,342,611...152,414,171
Ensembl chr 1:152,344,448...152,414,157 		JBrowse link
G Nphp1 nephrocystin 1 located_in ISO (PMID:16885411) RGD PMID:16885411 NCBI chr 3:114,960,650...115,016,234
Ensembl chr 3:114,960,650...115,016,234 		JBrowse link
G Nphp4 nephrocystin 4 located_in ISO (PMID:21078623) RGD PMID:21078623 NCBI chr 5:162,986,157...163,073,708
Ensembl chr 5:162,988,370...163,073,706 		JBrowse link
G Pcdhb22 protocadherin beta 22 located_in ISO (PMID:18279309) RGD PMID:18279309 NCBI chr18:29,223,028...29,229,132
Ensembl chr18:29,223,149...29,225,536 		JBrowse link
G Poc5 POC5 centriolar protein is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:27,719,745...27,748,805
Ensembl chr 2:27,719,762...27,748,805 		JBrowse link
G Rp1 RP1, axonemal microtubule associated located_in ISO (PMID:11767049)
(PMID:11773008), (PMID:14507858)		 RGD PMID:11767049 PMID:11773008 PMID:14507858 NCBI chr 5:15,121,104...15,582,363
Ensembl chr 5:15,121,133...15,579,363 		JBrowse link
G Rp1l1 RP1 like 1 located_in ISO (PMID:19657028) RGD PMID:19657028 NCBI chr15:38,259,907...38,271,269
Ensembl chr15:38,259,928...38,270,316 		JBrowse link
G Rpgr retinitis pigmentosa GTPase regulator located_in ISO (PMID:10725384) RGD PMID:10725384 NCBI chr  X:12,566,447...12,628,171
Ensembl chr  X:12,566,645...12,747,882 		JBrowse link
G Rpgrip1 RPGR interacting protein 1 located_in ISO (PMID:25398945) RGD PMID:25398945 NCBI chr15:24,814,576...24,867,522
Ensembl chr15:24,814,614...24,868,605 		JBrowse link
G Rpgrip1l Rpgrip1-like is_active_in IDA
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:17558407 GO_REF:0000033, RGD:11537356 NCBI chr19:15,692,189...15,785,083
Ensembl chr19:15,692,150...15,785,083 		JBrowse link
G Septin2 septin 2 located_in ISO
IEA		 (PMID:23572511)
GO_REF:0000107		 RGD
Ensembl		 PMID:23572511 GO_REF:0000107 NCBI chr 9:94,018,141...94,051,386
Ensembl chr 9:94,018,208...94,051,386 		JBrowse link
G Spata7 spermatogenesis associated 7 located_in ISS
ISO		 GO_REF:0000024
(PMID:25398945)		 UniProt
RGD		 PMID:25398945 GO_REF:0000024 NCBI chr 6:117,879,828...117,925,284
Ensembl chr 6:117,879,823...117,925,284 		JBrowse link
G Sptbn5 spectrin, beta, non-erythrocytic 5 located_in ISO (PMID:23704327) RGD PMID:23704327 NCBI chr 3:107,013,783...107,054,878
Ensembl chr 3:107,013,265...107,054,324 		JBrowse link
G Tbcc tubulin folding cofactor C located_in ISO (PMID:12417528) RGD PMID:12417528 NCBI chr 9:14,098,855...14,100,043
Ensembl chr 9:14,098,868...14,100,042 		JBrowse link
G Tmem237 transmembrane protein 237 located_in ISO (PMID:20375344) RGD PMID:20375344 NCBI chr 9:60,533,348...60,569,253
Ensembl chr 9:60,535,233...60,572,567 		JBrowse link
G Topors TOP1 binding arginine/serine rich protein, E3 ubiquitin ligase located_in
is_active_in		 ISO
IBA		 (PMID:21159800)
GO_REF:0000033		 RGD
GO_Central		 PMID:21159800 GO_REF:0000033 NCBI chr 5:55,388,033...55,399,937
Ensembl chr 5:55,387,632...55,399,937 		JBrowse link
G Tsga10ip testis specific 10 interacting protein is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:202,700,576...202,714,668
Ensembl chr 1:202,700,578...202,714,798 		JBrowse link
G Ttc8 tetratricopeptide repeat domain 8 located_in ISO (PMID:14520415) RGD PMID:14520415 NCBI chr 6:118,198,186...118,252,422
Ensembl chr 6:118,198,201...118,252,418 		JBrowse link
G Ush1g USH1 protein network component sans located_in ISO (PMID:17906286) RGD PMID:17906286 NCBI chr10:100,559,721...100,563,590
Ensembl chr10:100,557,629...100,563,590 		JBrowse link
G Ush2a usherin located_in IDA
ISO
IEA		 (PMID:17906286), (PMID:21212183)
GO_REF:0000107		 RGD
Ensembl		 PMID:17906286 PMID:21212183 PMID:16434480 GO_REF:0000107, RGD:1600128 NCBI chr13:99,837,445...100,503,935
Ensembl chr13:99,837,445...100,503,922 		JBrowse link
G Wdr19 WD repeat domain 19 located_in ISO (PMID:19208653) RGD PMID:19208653 NCBI chr14:43,042,474...43,106,337
Ensembl chr14:43,042,478...43,106,288 		JBrowse link
G Whrn whirlin located_in IDA
ISO
IEA		 (PMID:17906286), (PMID:21212183)
GO_REF:0000107		 RGD
Ensembl		 PMID:17906286 PMID:21212183 PMID:16434480 GO_REF:0000107, RGD:1600128 NCBI chr 5:76,828,308...76,911,945
Ensembl chr 5:76,828,301...76,912,223 		JBrowse link
photoreceptor disc membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AC131360.2 located_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 Ensembl chr18:29,185,443...29,187,845 JBrowse link
G Rho rhodopsin located_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:25664179)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:25664179 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:148,975,597...148,988,693
Ensembl chr 4:148,980,611...148,985,773 		JBrowse link
G Sptbn5 spectrin, beta, non-erythrocytic 5 located_in ISO (PMID:23704327) RGD PMID:23704327 NCBI chr 3:107,013,783...107,054,878
Ensembl chr 3:107,013,265...107,054,324 		JBrowse link
photoreceptor distal connecting cilium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahi1 Abelson helper integration site 1 located_in ISO (PMID:29899041) RGD PMID:29899041 NCBI chr 1:15,762,485...15,891,213
Ensembl chr 1:15,762,462...15,891,041 		JBrowse link
G Cep290 centrosomal protein 290 located_in ISO (PMID:29899041) RGD PMID:29899041 NCBI chr 7:35,310,071...35,399,388
Ensembl chr 7:35,310,199...35,399,392 		JBrowse link
G Nphp1 nephrocystin 1 located_in ISO (PMID:29899041) RGD PMID:29899041 NCBI chr 3:114,960,650...115,016,234
Ensembl chr 3:114,960,650...115,016,234 		JBrowse link
G Nphp4 nephrocystin 4 located_in ISO (PMID:29899041) RGD PMID:29899041 NCBI chr 5:162,986,157...163,073,708
Ensembl chr 5:162,988,370...163,073,706 		JBrowse link
G Rpgr retinitis pigmentosa GTPase regulator located_in ISO (PMID:29899041) RGD PMID:29899041 NCBI chr  X:12,566,447...12,628,171
Ensembl chr  X:12,566,645...12,747,882 		JBrowse link
G Rpgrip1 RPGR interacting protein 1 located_in ISO (PMID:29899041) RGD PMID:29899041 NCBI chr15:24,814,576...24,867,522
Ensembl chr15:24,814,614...24,868,605 		JBrowse link
G Spata7 spermatogenesis associated 7 located_in
is_active_in		 IEA
IBA
ISO		 GO_REF:0000107
GO_REF:0000033
MGI:5660490 (PMID:29899041)		 Ensembl
GO_Central
RGD		 PMID:29899041 GO_REF:0000033 GO_REF:0000107 NCBI chr 6:117,879,828...117,925,284
Ensembl chr 6:117,879,823...117,925,284 		JBrowse link
photoreceptor outer segment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca4 ATP binding cassette subfamily A member 4 located_in ISO (PMID:23943788), (PMID:9202155) RGD PMID:9202155 PMID:23943788 NCBI chr 2:210,164,813...210,302,069
Ensembl chr 2:210,164,813...210,302,069 		JBrowse link
G Ahi1 Abelson helper integration site 1 located_in ISO (PMID:20592197) RGD PMID:20592197 NCBI chr 1:15,762,485...15,891,213
Ensembl chr 1:15,762,462...15,891,041 		JBrowse link
G Arr3 arrestin 3 located_in IEA
ISO		 GO_REF:0000107
(PMID:10725384), (PMID:12486395)		 Ensembl
RGD		 PMID:10725384 PMID:12486395 GO_REF:0000107 NCBI chr  X:65,699,881...65,712,224
Ensembl chr  X:65,698,699...65,712,153 		JBrowse link
G Bbs4 Bardet-Biedl syndrome 4 located_in ISO (PMID:23943788) RGD PMID:23943788 NCBI chr 8:59,731,912...59,765,408
Ensembl chr 8:59,731,912...59,765,607 		JBrowse link
G Bbs7 Bardet-Biedl syndrome 7 located_in ISO (PMID:23943788) RGD PMID:23943788 NCBI chr 2:119,434,760...119,474,665
Ensembl chr 2:119,434,760...119,474,396 		JBrowse link
G Bsg basigin located_in ISS
ISO		 GO_REF:0000024
(PMID:25957687)		 UniProt
RGD		 PMID:25957687 GO_REF:0000024 NCBI chr 7:9,993,170...10,000,387
Ensembl chr 7:9,993,170...10,000,387 		JBrowse link
G Cacna1f calcium voltage-gated channel subunit alpha1 F IDA RGD PMID:11526344 RGD:632484 NCBI chr  X:14,868,096...14,896,413
Ensembl chr  X:14,868,024...14,896,413 		JBrowse link
G Cep250 centrosomal protein 250 located_in ISO (PMID:28005958) RGD PMID:28005958 NCBI chr 3:144,470,946...144,516,125
Ensembl chr 3:144,471,214...144,516,125 		JBrowse link
G Cep290 centrosomal protein 290 located_in ISO (PMID:23943788) RGD PMID:23943788 NCBI chr 7:35,310,071...35,399,388
Ensembl chr 7:35,310,199...35,399,392 		JBrowse link
G Cerkl CERK like autophagy regulator located_in ISO (PMID:23142158) RGD PMID:23142158 NCBI chr 3:64,238,714...64,344,695
Ensembl chr 3:64,237,522...64,340,675 		JBrowse link
G Cfap410 cilia and flagella associated protein 410 located_in ISO (PMID:27548899) RGD PMID:27548899 NCBI chr20:10,687,863...10,694,736
Ensembl chr20:10,687,863...10,694,737 		JBrowse link
G Cib2 calcium and integrin binding family member 2 located_in ISS
ISO		 GO_REF:0000024
(PMID:23023331)		 UniProt
RGD		 PMID:23023331 GO_REF:0000024 NCBI chr 8:54,930,265...54,947,157 JBrowse link
G Cnga1 cyclic nucleotide gated channel subunit alpha 1 located_in ISO (PMID:10725384), (PMID:15634774), (PMID:20592197) RGD PMID:10725384 PMID:15634774 PMID:20592197 NCBI chr14:35,566,947...35,605,065
Ensembl chr14:35,567,125...35,605,065 		JBrowse link
G Cnga3 cyclic nucleotide gated channel subunit alpha 3 located_in ISO (PMID:15634774) RGD PMID:15634774 NCBI chr 9:39,447,534...39,494,044
Ensembl chr 9:39,448,034...39,493,183 		JBrowse link
G Cngb1 cyclic nucleotide gated channel subunit beta 1 is_active_in
located_in		 IBA
ISO		 GO_REF:0000033
(PMID:22183407)		 GO_Central
RGD		 PMID:22183407 GO_REF:0000033 NCBI chr19:9,726,595...9,791,111
Ensembl chr19:9,726,595...9,791,173 		JBrowse link
G Cngb3 cyclic nucleotide gated channel subunit beta 3 is_active_in
located_in		 IBA
ISO		 GO_REF:0000033
(PMID:15634774)		 GO_Central
RGD		 PMID:15634774 GO_REF:0000033 NCBI chr 5:32,746,988...32,995,121
Ensembl chr 5:32,746,988...32,995,121 		JBrowse link
G Crb1 crumbs cell polarity complex component 1 located_in ISO (PMID:15316081) RGD PMID:15316081 NCBI chr13:50,801,484...50,989,261
Ensembl chr13:50,800,959...50,989,261 		JBrowse link
G Gnat1 G protein subunit alpha transducin 1 located_in IDA
ISO		 (PMID:18367617), (PMID:20592197), (PMID:31696965)
(PMID:2534964)		 RGD PMID:2534964 PMID:18367617 PMID:20592197 PMID:31696965 PMID:11931744 More... RGD:1599009, RGD:6893629 NCBI chr 8:108,350,935...108,355,671
Ensembl chr 8:108,350,935...108,355,671 		JBrowse link
G Gnat2 G protein subunit alpha transducin 2 is_active_in
located_in		 IDA
IBA
ISO		 GO_REF:0000033
(PMID:2534964)		 GO_Central
RGD		 PMID:2534964 PMID:17591908 GO_REF:0000033, RGD:2302146 NCBI chr 2:195,726,371...195,735,866
Ensembl chr 2:195,726,762...195,735,866 		JBrowse link
G Gnat3 G protein subunit alpha transducin 3 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:17,162,500...17,212,283
Ensembl chr 4:17,162,490...17,212,283 		JBrowse link
G Gnb1 G protein subunit beta 1 located_in ISO (PMID:18367617) RGD PMID:18367617 NCBI chr 5:166,075,508...166,142,223
Ensembl chr 5:166,075,629...166,142,124 		JBrowse link
G Gngt1 G protein subunit gamma transducin 1 IDA RGD PMID:11931744 PMID:10396627 RGD:1599009, RGD:6893629 NCBI chr 4:32,006,267...32,009,252
Ensembl chr 4:32,006,267...32,009,252 		JBrowse link
G Grk1 G protein-coupled receptor kinase 1 located_in ISO (PMID:22183407) RGD PMID:22183407 NCBI chr16:76,122,501...76,135,792
Ensembl chr16:76,123,842...76,135,792 		JBrowse link
G Guca1a guanylate cyclase activator 1A located_in IDA
ISO		 (PMID:22183407) RGD PMID:22183407 PMID:9620085 RGD:1599354 NCBI chr 9:13,588,988...13,598,566
Ensembl chr 9:13,588,525...13,598,565 		JBrowse link
G Guca1b guanylate cyclase activator 1B located_in IDA
ISO		 (PMID:22183407) RGD PMID:22183407 PMID:9620085 RGD:1599354 NCBI chr 9:13,599,619...13,607,455
Ensembl chr 9:13,599,619...13,607,455 		JBrowse link
G Gucy2e guanylate cyclase 2E located_in ISO (PMID:7912093) RGD PMID:7912093 NCBI chr10:53,954,918...53,975,576
Ensembl chr10:53,959,010...53,974,067 		JBrowse link
G Hnf1a HNF1 homeobox A located_in ISO MGI:96770 (PMID:10090727) RGD PMID:10090727 NCBI chr12:41,638,536...41,672,806
Ensembl chr12:41,645,587...41,672,104 		JBrowse link
G Ift20 intraflagellar transport 20 located_in ISO (PMID:21307337) RGD PMID:21307337 NCBI chr10:63,432,597...63,438,125
Ensembl chr10:63,432,633...63,438,124 		JBrowse link
G Impg1 interphotoreceptor matrix proteoglycan 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 8:81,243,624...81,389,722
Ensembl chr 8:81,243,624...81,389,722 		JBrowse link
G Impg2 interphotoreceptor matrix proteoglycan 2 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr11:44,318,836...44,418,382
Ensembl chr11:44,318,836...44,418,382 		JBrowse link
G Inha inhibin subunit alpha IDA RGD PMID:7596220 RGD:2290440 NCBI chr 9:76,994,465...76,997,366
Ensembl chr 9:76,993,589...76,997,248 		JBrowse link
G Iqcb1 IQ motif containing B1 located_in ISO (PMID:15723066) RGD PMID:15723066 NCBI chr11:63,905,595...63,960,141
Ensembl chr11:63,905,590...63,960,093 		JBrowse link
G Kif17 kinesin family member 17 located_in ISO (PMID:19384852) RGD PMID:19384852 NCBI chr 5:150,482,288...150,521,471
Ensembl chr 5:150,481,578...150,519,638 		JBrowse link
G Kifap3 kinesin-associated protein 3 located_in ISO (PMID:19384852) RGD PMID:19384852 NCBI chr13:76,127,702...76,264,654
Ensembl chr13:76,127,696...76,264,650 		JBrowse link
G Lyar Ly1 antibody reactive located_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:25735755)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:25735755 GO_REF:0000024 GO_REF:0000107 NCBI chr14:72,576,878...72,590,854
Ensembl chr14:72,576,879...72,590,612 		JBrowse link
G Magi2 membrane associated guanylate kinase, WW and PDZ domain containing 2 located_in ISS
ISO		 GO_REF:0000024
(PMID:24608321)		 UniProt
RGD		 PMID:24608321 GO_REF:0000024 NCBI chr 4:14,386,389...15,870,036
Ensembl chr 4:14,386,399...15,870,240 		JBrowse link
G Mak male germ cell-associated kinase located_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:21148103)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:21148103 GO_REF:0000024 GO_REF:0000107 NCBI chr17:23,683,753...23,731,125
Ensembl chr17:23,693,878...23,730,001 		JBrowse link
G Map1a microtubule-associated protein 1A located_in ISO (PMID:24664738) RGD PMID:24664738 NCBI chr 3:108,263,217...108,283,936
Ensembl chr 3:108,263,151...108,282,899 		JBrowse link
G Map1b microtubule-associated protein 1B located_in ISO (PMID:24664738) RGD PMID:24664738 NCBI chr 2:30,817,261...30,910,458
Ensembl chr 2:30,817,261...30,910,317 		JBrowse link
G Mertk MER proto-oncogene, tyrosine kinase IDA RGD PMID:11861639 RGD:1299193 NCBI chr 3:115,939,351...116,045,141
Ensembl chr 3:115,939,351...116,046,554 		JBrowse link
G Myo3b myosin IIIB located_in ISO (PMID:19332056) RGD PMID:19332056 NCBI chr 3:54,820,225...55,228,518
Ensembl chr 3:54,820,251...55,227,373 		JBrowse link
G Myo5a myosin VA located_in ISO (PMID:14978221) RGD PMID:14978221 NCBI chr 8:75,811,985...75,980,049
Ensembl chr 8:75,812,412...75,975,918 		JBrowse link
G Myo7a myosin VIIA located_in
NOT|located_in		 ISO (PMID:8842737) RGD PMID:8842737 NCBI chr 1:152,342,611...152,414,171
Ensembl chr 1:152,344,448...152,414,157 		JBrowse link
G Myrip myosin VIIA and Rab interacting protein located_in IEA
ISO		 GO_REF:0000107
(PMID:11964381)		 Ensembl
RGD		 PMID:11964381 GO_REF:0000107 NCBI chr 8:120,017,749...120,184,821
Ensembl chr 8:120,017,524...120,183,833 		JBrowse link
G Nup42 nucleoporin 42 located_in ISO (PMID:22183407) RGD PMID:22183407 NCBI chr 4:10,985,554...11,002,591
Ensembl chr 4:10,985,554...11,002,591 		JBrowse link
G Ocrl OCRL, inositol polyphosphate-5-phosphatase located_in ISO
IEA		 (PMID:22543976)
GO_REF:0000107		 RGD
Ensembl		 PMID:22543976 GO_REF:0000107 NCBI chr  X:127,089,508...127,140,362
Ensembl chr  X:127,089,590...127,140,362 		JBrowse link
G Opn1mw opsin 1, medium wave sensitive located_in
is_active_in		 IDA
ISO
IBA		 (PMID:10725384), (PMID:12651948), (PMID:19332056), (PMID:23351594), (PMID:23386608)
GO_REF:0000033		 RGD
GO_Central		 PMID:10725384 PMID:12651948 PMID:19332056 PMID:23351594 PMID:23386608 More... GO_REF:0000033, RGD:6893562 NCBI chr  X:151,905,056...151,925,419
Ensembl chr  X:151,905,096...151,925,388 		JBrowse link
G Opn1sw opsin 1, short wave sensitive located_in
is_active_in		 IDA
ISO
IBA		 (PMID:10725384), (PMID:12651948), (PMID:19332056), (PMID:22183407), (PMID:23351594), (PMID:23386608), (PMID:26420485)
GO_REF:0000033		 RGD
GO_Central		 PMID:10725384 PMID:12651948 PMID:19332056 PMID:22183407 PMID:23351594 More... GO_REF:0000033, RGD:6893562 NCBI chr 4:57,977,317...57,980,457
Ensembl chr 4:57,977,313...57,980,457 		JBrowse link
G Opn3 opsin 3 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:87,589,333...87,619,847
Ensembl chr13:87,589,333...87,619,847 		JBrowse link
G Pcare photoreceptor cilium actin regulator is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:23,749,700...23,758,424
Ensembl chr 6:23,749,757...23,758,169 		JBrowse link
G Pcdh15 protocadherin related 15 located_in ISO (PMID:14570705) RGD PMID:14570705 NCBI chr20:13,997,094...15,496,446
Ensembl chr20:13,963,565...15,494,719 		JBrowse link
G Pdc phosducin is_active_in
located_in		 IBA
ISO		 GO_REF:0000033
(PMID:18367617)		 GO_Central
RGD		 PMID:18367617 GO_REF:0000033 NCBI chr13:62,297,281...62,371,754
Ensembl chr13:62,358,196...62,371,754 		JBrowse link
G Pde6b phosphodiesterase 6B located_in ISO (PMID:22183407) RGD PMID:22183407 NCBI chr14:1,323,310...1,366,450
Ensembl chr14:1,323,310...1,366,450 		JBrowse link
G Pex6 peroxisomal biogenesis factor 6 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 9:14,258,145...14,270,335
Ensembl chr 9:14,258,145...14,270,303 		JBrowse link
G Pip4k2a phosphatidylinositol-5-phosphate 4-kinase type 2 alpha located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr17:81,496,669...81,668,180
Ensembl chr17:81,496,670...81,668,029 		JBrowse link
G Prcd photoreceptor disc component located_in ISO (PMID:23672200) RGD PMID:23672200 NCBI chr10:101,887,192...101,907,647 JBrowse link
G Prom1 prominin 1 located_in ISO (PMID:19228982) RGD PMID:19228982 NCBI chr14:66,989,545...67,094,534
Ensembl chr14:66,990,160...67,094,527 		JBrowse link
G Prph peripherin located_in ISO (PMID:22183407) RGD PMID:22183407 NCBI chr 7:130,218,149...130,222,136
Ensembl chr 7:130,218,357...130,222,136 		JBrowse link
G Prph2 peripherin 2 located_in ISO (PMID:22183407), (PMID:26420485), (PMID:28053051) RGD PMID:22183407 PMID:26420485 PMID:28053051 NCBI chr 9:14,066,149...14,081,454
Ensembl chr 9:14,066,156...14,081,454 		JBrowse link
G Ptgs1 prostaglandin-endoperoxide synthase 1 located_in IEA
ISO		 GO_REF:0000107
(PMID:12355421)		 Ensembl
RGD		 PMID:12355421 GO_REF:0000107 NCBI chr 3:19,584,015...19,605,589
Ensembl chr 3:19,584,015...19,605,586 		JBrowse link
G Ptprk protein tyrosine phosphatase, receptor type, K located_in ISO (PMID:18308476) RGD PMID:18308476 NCBI chr 1:16,738,896...17,236,687
Ensembl chr 1:16,850,576...17,103,605 		JBrowse link
G Rab27a RAB27A, member RAS oncogene family located_in ISO (PMID:11964381) RGD PMID:11964381 NCBI chr 8:73,782,730...73,836,630
Ensembl chr 8:73,782,694...73,847,829 		JBrowse link
G Rapgef4 Rap guanine nucleotide exchange factor 4 IDA RGD PMID:19883736 RGD:2314691 NCBI chr 3:56,809,388...57,101,332
Ensembl chr 3:56,809,270...57,102,316 		JBrowse link
G Rd3 RD3 regulator of GUCY2D located_in ISO (PMID:29515371) RGD PMID:29515371 NCBI chr13:103,551,823...103,562,925
Ensembl chr13:103,552,857...103,562,622 		JBrowse link
G Rho rhodopsin located_in
is_active_in		 IDA
ISO
IBA		 (PMID:10725384), (PMID:12651948), (PMID:20592197), (PMID:21212183), (PMID:22183407), (PMID:22869374), (PMID:23351594), (PMID:23943788), (PMID:25224828), (PMID:26420485)
GO_REF:0000033
(PMID:11767049), (PMID:23704327)		 RGD
GO_Central		 PMID:10725384 PMID:11767049 PMID:12651948 PMID:20592197 PMID:21212183 More... GO_REF:0000033, RGD:6893595 NCBI chr 4:148,975,597...148,988,693
Ensembl chr 4:148,980,611...148,985,773 		JBrowse link
G Rom1 retinal outer segment membrane protein 1 located_in ISO (PMID:20592197), (PMID:22183407), (PMID:26420485) RGD PMID:20592197 PMID:22183407 PMID:26420485 NCBI chr 1:205,824,050...205,826,058
Ensembl chr 1:205,824,052...205,826,175 		JBrowse link
G Rp1 RP1, axonemal microtubule associated located_in ISO (PMID:14507858), (PMID:15269252) RGD PMID:14507858 PMID:15269252 NCBI chr 5:15,121,104...15,582,363
Ensembl chr 5:15,121,133...15,579,363 		JBrowse link
G Rp1l1 RP1 like 1 located_in ISO (PMID:19657028) RGD PMID:19657028 NCBI chr15:38,259,907...38,271,269
Ensembl chr15:38,259,928...38,270,316 		JBrowse link
G Rpgr retinitis pigmentosa GTPase regulator located_in ISO (PMID:12140192) RGD PMID:12140192 NCBI chr  X:12,566,447...12,628,171
Ensembl chr  X:12,566,645...12,747,882 		JBrowse link
G Rrh retinal pigment epithelium derived rhodopsin homolog is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:218,362,195...218,374,387
Ensembl chr 2:218,362,200...218,374,599 		JBrowse link
G Sag S-antigen visual arrestin is_active_in
located_in		 IDA
IBA
ISO
IEA		 GO_REF:0000033
(PMID:22869374)
GO_REF:0000107
(PMID:3720866)		 GO_Central
RGD
Ensembl		 PMID:3720866 PMID:22869374 PMID:10396627 GO_REF:0000033 GO_REF:0000107, RGD:6893629 NCBI chr 9:88,467,797...88,508,821
Ensembl chr 9:88,469,376...88,508,820 		JBrowse link
G Shank2 SH3 and multiple ankyrin repeat domains 2 located_in ISS
ISO		 GO_REF:0000024
(PMID:19299912)		 BHF-UCL
RGD		 PMID:19299912 GO_REF:0000024 NCBI chr 1:199,146,210...199,590,962
Ensembl chr 1:199,169,429...199,589,394 		JBrowse link
G Stx3 syntaxin 3 located_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:33974130)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:33974130 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:208,617,018...208,686,240
Ensembl chr 1:208,639,115...208,685,805 		JBrowse link
G Tmem30a transmembrane protein 30A located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 8:80,728,749...80,757,197
Ensembl chr 8:80,729,619...80,753,248 		JBrowse link
G Tulp1 TUB like protein 1 located_in ISO (PMID:19218615) RGD PMID:19218615 NCBI chr20:6,412,170...6,424,103
Ensembl chr20:6,412,171...6,424,073 		JBrowse link
G Ush1c USH1 protein network component harmonin located_in IDA
ISO		 (PMID:14578428), (PMID:17906286) RGD PMID:14578428 PMID:17906286 PMID:14578428 RGD:1303964 NCBI chr 1:96,695,303...96,743,671
Ensembl chr 1:96,695,307...96,743,671 		JBrowse link
G Vcan versican located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 2:20,761,718...20,860,637
Ensembl chr 2:20,761,718...20,860,637 		JBrowse link
photoreceptor outer segment membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdhr1 cadherin-related family member 1 located_in IEA
ISO		 GO_REF:0000107
(PMID:18654668)		 Ensembl
RGD		 PMID:18654668 GO_REF:0000107 NCBI chr16:12,843,436...12,863,321
Ensembl chr16:12,843,437...12,863,396 		JBrowse link
G Cnga1 cyclic nucleotide gated channel subunit alpha 1 located_in IEA
ISO		 GO_REF:0000107
(PMID:18654668)		 Ensembl
RGD		 PMID:18654668 GO_REF:0000107 NCBI chr14:35,566,947...35,605,065
Ensembl chr14:35,567,125...35,605,065 		JBrowse link
G Gnb1 G protein subunit beta 1 IDA RGD PMID:11931744 RGD:1599009 NCBI chr 5:166,075,508...166,142,223
Ensembl chr 5:166,075,629...166,142,124 		JBrowse link
G Gucy2e guanylate cyclase 2E located_in IEA
ISO
IDA		 GO_REF:0000107
(PMID:21598940)
PMID:9153227		 Ensembl
RGD		 PMID:21598940 PMID:9153227 GO_REF:0000107, RGD:1599625 NCBI chr10:53,954,918...53,975,576
Ensembl chr10:53,959,010...53,974,067 		JBrowse link
G Pde6a phosphodiesterase 6A is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr18:54,676,863...54,748,640
Ensembl chr18:54,676,863...54,748,816 		JBrowse link
G Pde6b phosphodiesterase 6B is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:1,323,310...1,366,450
Ensembl chr14:1,323,310...1,366,450 		JBrowse link
G Pde6g phosphodiesterase 6G is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:105,721,502...105,726,150
Ensembl chr10:105,721,682...105,726,719 		JBrowse link
G Pde6h phosphodiesterase 6H is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:169,857,793...169,872,969
Ensembl chr 4:169,857,812...169,872,969 		JBrowse link
G Phlpp2 PH domain and leucine rich repeat protein phosphatase 2 IDA RGD PMID:20089132 RGD:5131540 NCBI chr19:37,835,125...37,901,804
Ensembl chr19:37,835,125...37,905,513 		JBrowse link
G Prcd photoreceptor disc component located_in ISO (PMID:27613864)
(PMID:27509380), (PMID:27613864)		 RGD PMID:27509380 PMID:27613864 NCBI chr10:101,887,192...101,907,647 JBrowse link
G Prom1 prominin 1 located_in ISO (PMID:18654668) RGD PMID:18654668 NCBI chr14:66,989,545...67,094,534
Ensembl chr14:66,990,160...67,094,527 		JBrowse link
G Prph peripherin located_in ISO (PMID:10414956) RGD PMID:10414956 NCBI chr 7:130,218,149...130,222,136
Ensembl chr 7:130,218,357...130,222,136 		JBrowse link
G Rdh11 retinol dehydrogenase 11 NOT|located_in ISO (PMID:15790565) RGD PMID:15790565 NCBI chr 6:97,979,377...97,995,252
Ensembl chr 6:97,979,378...97,995,252 		JBrowse link
G Rho rhodopsin located_in IDA
IEA
ISO
ISS		 GO_REF:0000107
(PMID:19934218)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:19934218 PMID:2209754 GO_REF:0000024 GO_REF:0000107, RGD:6893561 NCBI chr 4:148,975,597...148,988,693
Ensembl chr 4:148,980,611...148,985,773 		JBrowse link
G Rom1 retinal outer segment membrane protein 1 located_in ISO (PMID:18654668) RGD PMID:18654668 NCBI chr 1:205,824,050...205,826,058
Ensembl chr 1:205,824,052...205,826,175 		JBrowse link
photoreceptor proximal connecting cilium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cep290 centrosomal protein 290 located_in ISO (PMID:29899041) RGD PMID:29899041 NCBI chr 7:35,310,071...35,399,388
Ensembl chr 7:35,310,199...35,399,392 		JBrowse link
rod photoreceptor outer segment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp1a4 ATPase Na+/K+ transporting subunit alpha 4 located_in ISO
IEA		 (PMID:26373354)
GO_REF:0000107		 RGD
Ensembl		 PMID:26373354 GO_REF:0000107 NCBI chr13:84,683,766...84,719,790
Ensembl chr13:84,683,768...84,719,687 		JBrowse link
G Cep290 centrosomal protein 290 is_active_in ISO MGI:2144877 (PMID:29899041) RGD PMID:29899041 NCBI chr 7:35,310,071...35,399,388
Ensembl chr 7:35,310,199...35,399,392 		JBrowse link
G Cnga1 cyclic nucleotide gated channel subunit alpha 1 located_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:22802073)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:22802073 GO_REF:0000024 GO_REF:0000107 NCBI chr14:35,566,947...35,605,065
Ensembl chr14:35,567,125...35,605,065 		JBrowse link
G Cngb1 cyclic nucleotide gated channel subunit beta 1 located_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr19:9,726,595...9,791,111
Ensembl chr19:9,726,595...9,791,173 		JBrowse link
G Gucy2f guanylate cyclase 2F located_in ISS
ISO		 GO_REF:0000024
(PMID:21078983)		 UniProt
RGD		 PMID:21078983 GO_REF:0000024 NCBI chr  X:105,710,356...105,808,183
Ensembl chr  X:105,710,356...105,808,183 		JBrowse link
G Rd3 RD3 regulator of GUCY2D located_in ISO (PMID:21078983) RGD PMID:21078983 NCBI chr13:103,551,823...103,562,925
Ensembl chr13:103,552,857...103,562,622 		JBrowse link
G Rgs9bp regulator of G protein signaling 9 binding protein located_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 1:88,249,438...88,250,151
Ensembl chr 1:88,249,438...88,250,151 		JBrowse link
G Rho rhodopsin located_in IEA
ISO		 GO_REF:0000107
(PMID:19332056), (PMID:21444805), (PMID:23178122)		 Ensembl
RGD		 PMID:19332056 PMID:21444805 PMID:23178122 GO_REF:0000107 NCBI chr 4:148,975,597...148,988,693
Ensembl chr 4:148,980,611...148,985,773 		JBrowse link
G Spata7 spermatogenesis associated 7 located_in
is_active_in		 IEA
ISO
IBA		 GO_REF:0000107
MGI:2384917|MGI:5660490 (PMID:29899041)
GO_REF:0000033		 Ensembl
RGD
GO_Central		 PMID:29899041 GO_REF:0000033 GO_REF:0000107 NCBI chr 6:117,879,828...117,925,284
Ensembl chr 6:117,879,823...117,925,284 		JBrowse link
G Tmem237 transmembrane protein 237 located_in ISO (PMID:20375344) RGD PMID:20375344 NCBI chr 9:60,533,348...60,569,253
Ensembl chr 9:60,535,233...60,572,567 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 20827
    cellular anatomical structure 20627
      cell projection 2659
        plasma membrane bounded cell projection 2567
          cilium 815
            non-motile cilium 181
              9+0 non-motile cilium 137
                photoreceptor cell cilium + 123
paths to the root