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ONTOLOGY REPORT - ANNOTATIONS

Term:non-motile cilium
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Accession:GO:0097730 term browser browse the term
Definition:A cilium which may have a variable array of axonemal microtubules but does not contain molecular motors.
Synonyms:exact_synonym: immotile cilium;   nonmotile cilium
 related_synonym: immotile primary cilium;   nonmotile primary cilia;   nonmotile primary cilium;   sensory cilium
 alt_id: GO:0031513


show annotations for term's descendants           Sort by:
non-motile cilium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahi1 Abelson helper integration site 1 located_in ISS
ISO 		GO_REF:0000024
(PMID:19625297), (PMID:19718039) 		UniProt
RGD		 PMID:19625297 PMID:19718039 GO_REF:0000024 NCBI chr 1:17,580,859...17,711,775
Ensembl chr 1:17,582,006...17,711,774 		JBrowse link
G Ano2 anoctamin 2 located_in ISO
IEA 		(PMID:21516098)
GO_REF:0000107 		RGD
Ensembl		 PMID:21516098 GO_REF:0000107 NCBI chr 4:160,200,471...160,541,830
Ensembl chr 4:160,182,152...160,541,821 		JBrowse link
G Arl13a ARF like GTPase 13A is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:101,673,637...101,699,986
Ensembl chr  X:101,673,652...101,699,984 		JBrowse link
G Arl13b ARF like GTPase 13B is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr11:13,597,538...13,663,681
Ensembl chr11:13,597,538...13,663,546 		JBrowse link
G Bbs4 Bardet-Biedl syndrome 4 located_in ISO
IEA 		(PMID:17574030)
GO_REF:0000117 		RGD
UniProt		 PMID:17574030 GO_REF:0000117 NCBI chr 8:68,627,739...68,661,232
Ensembl chr 8:68,627,656...68,661,358 		JBrowse link
G Cep89 centrosomal protein 89 located_in ISO
IEA 		(PMID:23789104)
GO_REF:0000107 		RGD
Ensembl		 PMID:23789104 GO_REF:0000107 NCBI chr 1:97,195,116...97,237,015
Ensembl chr 1:97,195,135...97,237,016 		JBrowse link
G Cfap69 cilia and flagella associated protein 69 is_active_in
located_in 		IBA
ISO 		GO_REF:0000033
(PMID:28495971) 		GO_Central
RGD		 PMID:28495971 GO_REF:0000033 NCBI chr 4:29,334,624...29,405,513
Ensembl chr 4:29,334,415...29,408,727 		JBrowse link
G Cngb1 cyclic nucleotide gated channel subunit beta 1 located_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr19:9,732,646...9,798,864
Ensembl chr19:9,732,646...9,797,224 		JBrowse link
G Cngb3 cyclic nucleotide gated channel subunit beta 3 located_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr 5:37,543,903...37,792,030
Ensembl chr 5:37,543,903...37,792,030 		JBrowse link
G Dnaaf4 dynein axonemal assembly factor 4 located_in IDA PMID:23300604 MGI PMID:23300604 RGD:10448945 NCBI chr 8:82,577,044...82,601,653
Ensembl chr 8:82,578,755...82,592,205 		JBrowse link
G Drd1 dopamine receptor D1 located_in ISO (PMID:20531939) RGD PMID:20531939 NCBI chr17:10,545,488...10,550,029
Ensembl chr17:10,545,111...10,567,166 		JBrowse link
G Drd2 dopamine receptor D2 located_in ISO
IEA 		(PMID:20531939)
GO_REF:0000107 		RGD
Ensembl		 PMID:20531939 GO_REF:0000107 NCBI chr 8:58,605,403...58,669,339
Ensembl chr 8:58,605,403...58,669,339 		JBrowse link
G Drd5 dopamine receptor D5 located_in IEA
ISO 		GO_REF:0000107
(PMID:20531939) 		Ensembl
RGD		 PMID:20531939 GO_REF:0000107 NCBI chr14:76,700,244...76,703,344
Ensembl chr14:76,700,241...76,703,466 		JBrowse link
G Erich3 glutamate-rich 3 located_in ISO (PMID:31712586) RGD PMID:31712586 NCBI chr 2:246,275,438...246,377,673
Ensembl chr 2:246,275,757...246,375,695 		JBrowse link
G Galr3 galanin receptor 3 located_in IEA
ISO 		GO_REF:0000107
(PMID:24316073) 		Ensembl
RGD		 PMID:24316073 GO_REF:0000107 NCBI chr 7:112,483,183...112,496,359
Ensembl chr 7:112,485,672...112,488,136 		JBrowse link
G Glis2 GLIS family zinc finger 2 located_in ISO (PMID:17618285) RGD PMID:17618285 NCBI chr10:11,457,594...11,484,948
Ensembl chr10:11,457,792...11,477,995 		JBrowse link
G Gpr83 G protein-coupled receptor 83 located_in IEA
ISO 		GO_REF:0000107
(PMID:24316073) 		Ensembl
RGD		 PMID:24316073 GO_REF:0000107 NCBI chr 8:19,974,995...19,985,483
Ensembl chr 8:19,974,993...19,985,490 		JBrowse link
G Gucy2d guanylate cyclase 2D located_in IDA PMID:11580282 UniProt PMID:11580282 RGD:15023466 NCBI chr 1:162,150,967...162,185,666
Ensembl chr 1:162,150,967...162,185,666 		JBrowse link
G Hyls1 HYLS1, centriolar and ciliogenesis associated is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:42,170,505...42,179,573
Ensembl chr 8:42,168,546...42,179,725 		JBrowse link
G Ift122 intraflagellar transport 122 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:150,577,525...150,648,052
Ensembl chr 4:150,539,786...150,648,052 		JBrowse link
G Ift140 intraflagellar transport 140 located_in ISO
IEA 		(PMID:24009529)
GO_REF:0000107 		RGD
Ensembl		 PMID:24009529 GO_REF:0000107 NCBI chr10:14,537,134...14,624,926
Ensembl chr10:14,537,466...14,624,926 		JBrowse link
G Ift20 intraflagellar transport 20 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:63,930,629...63,936,174
Ensembl chr10:63,930,681...63,936,172 		JBrowse link
G Ift88 intraflagellar transport 88 is_active_in
located_in 		IBA
ISO 		GO_REF:0000033
(PMID:16254602) 		GO_Central
RGD		 PMID:16254602 GO_REF:0000033 NCBI chr15:35,685,678...35,786,875
Ensembl chr15:35,688,927...35,781,634 		JBrowse link
G Mchr1 melanin-concentrating hormone receptor 1 located_in ISO
IEA 		(PMID:18334641), (PMID:23029470), (PMID:23351594)
GO_REF:0000107 		RGD
Ensembl		 PMID:18334641 PMID:23029470 PMID:23351594 GO_REF:0000107 NCBI chr 7:114,641,721...114,644,913
Ensembl chr 7:114,641,580...114,644,919 		JBrowse link
G Mdm1 Mdm1 nuclear protein located_in ISO (PMID:23300604) RGD PMID:23300604 NCBI chr 7:55,615,459...55,651,889
Ensembl chr 7:55,615,608...55,651,888 		JBrowse link
G Mlf1 myeloid leukemia factor 1 located_in ISO
IEA 		(PMID:23300604)
GO_REF:0000107 		RGD
Ensembl		 PMID:23300604 GO_REF:0000107 NCBI chr 2:153,958,060...153,991,705
Ensembl chr 2:153,958,546...153,994,220 		JBrowse link
G Nphp4 nephrocystin 4 is_active_in
located_in 		IBA
IEA 		GO_REF:0000033
GO_REF:0000002 		GO_Central
InterPro		 GO_REF:0000002 GO_REF:0000033 NCBI chr 5:168,270,522...168,356,393
Ensembl chr 5:168,271,073...168,358,242 		JBrowse link
G Npy2r neuropeptide Y receptor Y2 located_in ISO (PMID:24316073) RGD PMID:24316073 NCBI chr 2:170,200,027...170,210,286
Ensembl chr 2:170,200,027...170,210,448 		JBrowse link
G Pafah1b1 platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 NOT|located_in ISO (PMID:17314247) RGD PMID:17314247 NCBI chr10:60,031,441...60,090,259
Ensembl chr10:60,032,514...60,090,196 		JBrowse link
G Pcm1 pericentriolar material 1 NOT|located_in ISO (PMID:17574030) RGD PMID:17574030 NCBI chr16:57,711,833...57,808,842
Ensembl chr16:57,711,833...57,808,599 		JBrowse link
G Pgr15l G protein-coupled receptor 15-like located_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr  X:65,994,870...66,000,382
Ensembl chr  X:65,994,870...66,000,701 		JBrowse link
G Pkd1l1 polycystin 1 like 1, transient receptor potential channel interacting located_in ISO (PMID:24336289) RGD PMID:24336289 NCBI chr14:87,766,745...87,888,647
Ensembl chr14:87,760,208...87,852,259 		JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel located_in ISO (PMID:15123714)
(PMID:12062067) 		RGD PMID:12062067 PMID:15123714 NCBI chr14:5,541,821...5,585,140 JBrowse link
G Pkd2l1 polycystin 2 like 1, transient receptor potential cation channel located_in ISO
IEA 		(PMID:24336289)
GO_REF:0000107 		RGD
Ensembl		 PMID:24336289 GO_REF:0000107 NCBI chr 1:252,982,096...253,019,235
Ensembl chr 1:252,982,096...253,023,359 		JBrowse link
G Qrfpr pyroglutamylated RFamide peptide receptor located_in ISO
IEA 		(PMID:24316073)
GO_REF:0000107 		RGD
Ensembl		 PMID:24316073 GO_REF:0000107 NCBI chr 2:120,981,235...121,025,020
Ensembl chr 2:120,981,235...121,025,020 		JBrowse link
G Rab8a RAB8A, member RAS oncogene family located_in ISO
IEA 		(PMID:17574030), (PMID:24648492)
(PMID:19625297), (PMID:20592197)
GO_REF:0000107 		RGD
Ensembl		 PMID:17574030 PMID:19625297 PMID:20592197 PMID:24648492 GO_REF:0000107 NCBI chr16:17,688,049...17,709,412
Ensembl chr16:17,688,050...17,709,477 		JBrowse link
G Rpgrip1 RPGR interacting protein 1 located_in ISO (PMID:20592197) RGD PMID:20592197 NCBI chr15:27,282,997...27,341,021
Ensembl chr15:27,282,998...27,341,021 		JBrowse link
G Septin2 septin 2 located_in ISO
IEA 		(PMID:23572511)
GO_REF:0000107 		RGD
Ensembl		 PMID:23572511 GO_REF:0000107 NCBI chr 9:101,465,535...101,498,766
Ensembl chr 9:101,465,650...101,498,759 		JBrowse link
G Septin7 septin 7 located_in ISO (PMID:23572511) RGD PMID:23572511 NCBI chr 8:31,995,597...32,059,069
Ensembl chr 8:31,995,005...32,059,072 		JBrowse link
G Septin9 septin 9 located_in ISO (PMID:23572511) RGD PMID:23572511 NCBI chr10:102,908,557...103,077,789
Ensembl chr10:102,908,560...103,077,788 		JBrowse link
G Sstr3 somatostatin receptor 3 located_in ISO (PMID:18334641), (PMID:22832925), (PMID:23029470), (PMID:23351594) RGD PMID:18334641 PMID:22832925 PMID:23029470 PMID:23351594 NCBI chr 7:111,973,049...111,980,250
Ensembl chr 7:111,972,811...111,997,368 		JBrowse link
G Ttc8 tetratricopeptide repeat domain 8 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:123,927,657...124,025,354
Ensembl chr 6:123,927,907...123,982,117 		JBrowse link
G Tubg1 tubulin, gamma 1 located_in ISO
IEA 		(PMID:20592197)
GO_REF:0000107 		RGD
Ensembl		 PMID:20592197 GO_REF:0000107 NCBI chr10:86,553,143...86,559,733
Ensembl chr10:86,552,499...86,559,730 		JBrowse link
G Wdr19 WD repeat domain 19 located_in ISO
IEA 		(PMID:16957054)
GO_REF:0000107 		RGD
Ensembl		 PMID:16957054 GO_REF:0000107 NCBI chr14:43,396,130...43,460,012
Ensembl chr14:43,397,835...43,459,939 		JBrowse link
9+0 non-motile cilium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C13h1orf115 similar to human chromosome 1 open reading frame 115 located_in ISO (PMID:29257953) RGD PMID:29257953 NCBI chr13:98,953,841...98,963,577
Ensembl chr13:98,953,843...98,963,810 		JBrowse link
G Cfap96 cilia and flagella associated protein 96 located_in ISO
IEA 		(PMID:29257953)
GO_REF:0000107 		RGD
Ensembl		 PMID:29257953 GO_REF:0000107 NCBI chr16:53,023,623...53,048,176
Ensembl chr16:53,023,878...53,048,965 		JBrowse link
G Dynll2 dynein light chain LC8-type 2 located_in ISO
IEA 		(PMID:29257953)
GO_REF:0000107 		RGD
Ensembl		 PMID:29257953 GO_REF:0000107 NCBI chr10:73,264,260...73,283,042
Ensembl chr10:73,264,261...73,272,285 		JBrowse link
G Enkd1 enkurin domain containing 1 located_in ISO (PMID:29257953) RGD PMID:29257953 NCBI chr19:50,501,963...50,506,447
Ensembl chr19:50,501,963...50,506,942 		JBrowse link
G Ift80 intraflagellar transport 80 is_active_in ISO
IEA 		(PMID:26996322)
GO_REF:0000107 		RGD
Ensembl		 PMID:26996322 GO_REF:0000107 NCBI chr 2:155,455,773...155,550,082
Ensembl chr 2:155,455,774...155,550,275 		JBrowse link
G Iftap intraflagellar transport associated protein is_active_in
located_in 		IBA
ISO 		GO_REF:0000033
(PMID:26703212) 		GO_Central
RGD		 PMID:26703212 GO_REF:0000033 NCBI chr 3:108,242,105...108,361,607
Ensembl chr 3:108,267,132...108,361,573 		JBrowse link
G Phyh phytanoyl-CoA 2-hydroxylase located_in ISO
IEA 		(PMID:29257953)
GO_REF:0000107 		RGD
Ensembl		 PMID:29257953 GO_REF:0000107 NCBI chr17:78,238,747...78,255,645
Ensembl chr17:78,238,747...78,255,645 		JBrowse link
G Pkhd1 PKHD1 ciliary IPT domain containing fibrocystin/polyductin located_in ISO
IEA 		(PMID:24586199)
GO_REF:0000107 		RGD
Ensembl		 PMID:24586199 GO_REF:0000107 NCBI chr 9:30,040,466...30,533,834
Ensembl chr 9:30,046,038...30,533,935 		JBrowse link
G Smo smoothened, frizzled class receptor located_in IEA
ISO 		GO_REF:0000107
(PMID:26996322) 		Ensembl
RGD		 PMID:26996322 GO_REF:0000107 NCBI chr 4:59,311,084...59,341,280
Ensembl chr 4:59,311,041...59,341,281 		JBrowse link
G Ttll4 tubulin tyrosine ligase like 4 located_in ISO
IEA 		(PMID:17499049)
GO_REF:0000107 		RGD
Ensembl		 PMID:17499049 GO_REF:0000107 NCBI chr 9:83,670,788...83,706,891
Ensembl chr 9:83,681,025...83,700,404 		JBrowse link
G Ttll5 tubulin tyrosine ligase like 5 located_in ISO
IEA 		(PMID:17499049)
GO_REF:0000107 		RGD
Ensembl		 PMID:17499049 GO_REF:0000107 NCBI chr 6:111,214,048...111,431,892
Ensembl chr 6:111,214,103...111,431,891 		JBrowse link
G Ttll6 tubulin tyrosine ligase like 6 located_in ISO (PMID:17499049) RGD PMID:17499049 NCBI chr10:81,579,110...81,623,917
Ensembl chr10:81,579,178...81,623,919 		JBrowse link
G Ttll7 tubulin tyrosine ligase like 7 located_in ISO (PMID:17499049) RGD PMID:17499049 NCBI chr 2:238,425,786...238,549,296
Ensembl chr 2:238,426,076...238,545,960 		JBrowse link
G Tulp3 TUB like protein 3 located_in ISO
IEA 		(PMID:20889716)
GO_REF:0000107 		RGD
Ensembl		 PMID:20889716 GO_REF:0000107 NCBI chr 4:163,276,583...163,318,297
Ensembl chr 4:163,276,583...163,318,390 		JBrowse link
cone photoreceptor outer segment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cnga3 cyclic nucleotide gated channel subunit alpha 3 located_in ISO (PMID:10813773) RGD PMID:10813773 NCBI chr 9:46,943,353...46,989,862
Ensembl chr 9:46,928,810...46,989,862 		JBrowse link
G Guca1a guanylate cyclase activator 1A located_in
is_active_in 		ISO
IEA
IBA 		(PMID:9620085)
GO_REF:0000107
GO_REF:0000033 		RGD
Ensembl
GO_Central		 PMID:9620085 GO_REF:0000033 GO_REF:0000107 NCBI chr 9:21,080,782...21,096,221
Ensembl chr 9:21,086,642...21,096,221 		JBrowse link
G Guca1b guanylate cyclase activator 1B located_in
is_active_in 		ISO
IEA
IBA 		(PMID:9620085)
GO_REF:0000107
GO_REF:0000033 		RGD
Ensembl
GO_Central		 PMID:9620085 GO_REF:0000033 GO_REF:0000107 NCBI chr 9:21,097,274...21,105,107
Ensembl chr 9:21,097,274...21,105,107 		JBrowse link
G Ift140 intraflagellar transport 140 located_in ISO
IEA 		(PMID:24619649)
GO_REF:0000107 		RGD
Ensembl		 PMID:24619649 GO_REF:0000107 NCBI chr10:14,537,134...14,624,926
Ensembl chr10:14,537,466...14,624,926 		JBrowse link
G Opn1sw opsin 1, short wave sensitive located_in IEA
ISO 		GO_REF:0000107
(PMID:10813773) 		Ensembl
RGD		 PMID:10813773 GO_REF:0000107 NCBI chr 4:58,942,685...58,945,825
Ensembl chr 4:58,942,681...58,945,825 		JBrowse link
G Pcare photoreceptor cilium actin regulator located_in ISO
IEA 		(PMID:25616964)
GO_REF:0000107 		RGD
Ensembl		 PMID:25616964 GO_REF:0000107 NCBI chr 6:29,469,232...29,478,541
Ensembl chr 6:29,469,817...29,478,541 		JBrowse link
G Prkca protein kinase C, alpha located_in ISO (PMID:10813773) RGD PMID:10813773 NCBI chr10:93,388,991...93,787,617
Ensembl chr10:93,388,991...93,787,572 		JBrowse link
G Rd3 RD3 regulator of GUCY2D located_in ISO
IEA 		(PMID:21078983)
GO_REF:0000107 		RGD
Ensembl		 PMID:21078983 GO_REF:0000107 NCBI chr13:106,060,657...106,097,063
Ensembl chr13:106,084,171...106,093,540 		JBrowse link
G Slc24a4 solute carrier family 24 member 4 located_in ISO
IEA 		(PMID:28650316)
GO_REF:0000107 		RGD
Ensembl		 PMID:28650316 GO_REF:0000107 NCBI chr 6:127,044,470...127,184,684
Ensembl chr 6:127,044,470...127,184,684 		JBrowse link
G Tmem237 transmembrane protein 237 located_in ISO (PMID:20375344) RGD PMID:20375344 NCBI chr 9:68,027,481...68,066,731
Ensembl chr 9:68,030,664...68,063,525 		JBrowse link
kinociliary basal body term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdc14a cell division cycle 14A located_in ISO
IEA 		(PMID:29293958)
GO_REF:0000107 		RGD
Ensembl		 PMID:29293958 GO_REF:0000107 NCBI chr 2:206,910,475...207,070,537
Ensembl chr 2:206,910,475...207,091,722 		JBrowse link
G Ift20 intraflagellar transport 20 located_in ISO
IEA 		(PMID:25605782)
GO_REF:0000107 		RGD
Ensembl		 PMID:25605782 GO_REF:0000107 NCBI chr10:63,930,629...63,936,174
Ensembl chr10:63,930,681...63,936,172 		JBrowse link
G Mkks MKKS centrosomal shuttling protein located_in ISO
IEA 		(PMID:22446187)
GO_REF:0000107 		RGD
Ensembl		 PMID:22446187 GO_REF:0000107 NCBI chr 3:144,654,563...144,672,831
Ensembl chr 3:144,654,566...144,672,831 		JBrowse link
kinocilium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdc14a cell division cycle 14A located_in ISO
IEA 		(PMID:29293958)
GO_REF:0000044
GO_REF:0000107 		RGD
UniProt
Ensembl		 PMID:29293958 GO_REF:0000044 GO_REF:0000107 NCBI chr 2:206,910,475...207,070,537
Ensembl chr 2:206,910,475...207,091,722 		JBrowse link
G Cdh23 cadherin-related 23 located_in IEA
ISO 		GO_REF:0000107
(PMID:15882574) 		Ensembl
RGD		 PMID:15882574 GO_REF:0000107 NCBI chr20:28,783,124...29,165,624
Ensembl chr20:28,783,564...29,165,332 		JBrowse link
G Dcdc2 doublecortin domain containing 2 located_in
is_active_in 		IDA
IEA
IBA 		PMID:25601850
GO_REF:0000044
GO_REF:0000033 		UniProt
GO_Central		 PMID:25601850 GO_REF:0000033 GO_REF:0000044, RGD:10412291 NCBI chr17:40,274,009...40,459,757
Ensembl chr17:40,274,009...40,458,790 		JBrowse link
G Elmod3 ELMO domain containing 3 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 4:106,172,819...106,211,286
Ensembl chr 4:106,172,828...106,211,229 		JBrowse link
G Grxcr1 glutaredoxin and cysteine rich domain containing 1 is_active_in
located_in 		IBA
IEA
ISO 		GO_REF:0000033
GO_REF:0000044
GO_REF:0000107
(PMID:20137774) 		GO_Central
UniProt
Ensembl
RGD		 PMID:20137774 GO_REF:0000033 GO_REF:0000044 GO_REF:0000107 NCBI chr14:40,358,077...40,480,493
Ensembl chr14:40,358,077...40,480,493 		JBrowse link
G Ift88 intraflagellar transport 88 located_in ISO (PMID:18066062) RGD PMID:18066062 NCBI chr15:35,685,678...35,786,875
Ensembl chr15:35,688,927...35,781,634 		JBrowse link
G Kncn kinocilin located_in ISO
IEA 		(PMID:15855039), (PMID:20510926)
GO_REF:0000107 		RGD
Ensembl		 PMID:15855039 PMID:20510926 GO_REF:0000107 NCBI chr 5:134,600,214...134,603,657
Ensembl chr 5:134,600,214...134,603,657 		JBrowse link
G Rac1 Rac family small GTPase 1 located_in ISO (PMID:23533177) RGD PMID:23533177 NCBI chr12:16,150,411...16,170,864
Ensembl chr12:16,128,649...16,172,109 		JBrowse link
G Rsph9 radial spoke head component 9 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 9:22,337,681...22,350,515
Ensembl chr 9:22,337,668...22,351,448 		JBrowse link
G Strc stereocilin is_active_in
located_in 		IBA
IEA
ISO 		GO_REF:0000033
GO_REF:0000107
(PMID:21165971) 		GO_Central
Ensembl
RGD		 PMID:21165971 GO_REF:0000033 GO_REF:0000107 NCBI chr 3:128,785,817...128,811,773
Ensembl chr 3:128,789,290...128,808,023 		JBrowse link
G Tiam1 TIAM Rac1 associated GEF 1 located_in ISO (PMID:23533177) RGD PMID:23533177 NCBI chr11:42,517,527...42,866,280
Ensembl chr11:42,517,528...42,646,075 		JBrowse link
non-motile cilium membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cnga2 cyclic nucleotide gated channel subunit alpha 2 located_in IDA
ISS
IEA
ISO 		PMID:10377344
GO_REF:0000024
GO_REF:0000107
(PMID:16980309) 		UniProt
Ensembl
RGD		 PMID:16980309 PMID:10377344 GO_REF:0000024 GO_REF:0000107, RGD:632392 NCBI chr  X:154,741,742...154,759,814
Ensembl chr  X:154,741,764...154,759,814 		JBrowse link
G Cnga4 cyclic nucleotide gated channel subunit alpha 4 located_in IDA
IEA
ISO
ISS 		PMID:10377344
GO_REF:0000117
(PMID:16980309)
GO_REF:0000107
GO_REF:0000024 		UniProt
RGD
Ensembl		 PMID:16980309 PMID:10377344 GO_REF:0000024 GO_REF:0000107 GO_REF:0000117, RGD:632392 NCBI chr 1:169,134,332...169,168,317
Ensembl chr 1:169,164,206...169,168,224 		JBrowse link
G Cngb1 cyclic nucleotide gated channel subunit beta 1 located_in ISS
ISO
IEA
IDA 		GO_REF:0000024
(PMID:16980309)
GO_REF:0000107
PMID:10377344 		UniProt
RGD
Ensembl		 PMID:16980309 PMID:10377344 GO_REF:0000024 GO_REF:0000107, RGD:632392 NCBI chr19:9,732,646...9,798,864
Ensembl chr19:9,732,646...9,797,224 		JBrowse link
photoreceptor cell cilium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp1a4 ATPase Na+/K+ transporting subunit alpha 4 located_in ISO
IEA 		(PMID:26373354)
GO_REF:0000107 		RGD
Ensembl		 PMID:26373354 GO_REF:0000107 NCBI chr13:87,216,139...87,252,155
Ensembl chr13:87,216,139...87,251,724 		JBrowse link
G Cfap410 cilia and flagella associated protein 410 located_in ISO
IEA 		(PMID:29899041)
GO_REF:0000117
GO_REF:0000107 		RGD
UniProt
Ensembl		 PMID:29899041 GO_REF:0000107 GO_REF:0000117 NCBI chr20:10,687,506...10,694,366
Ensembl chr20:10,687,506...10,694,366 		JBrowse link
G Fam161a FAM161 centrosomal protein A located_in ISO (PMID:22791751) RGD PMID:22791751 NCBI chr14:101,210,694...101,256,020
Ensembl chr14:101,210,662...101,229,535 		JBrowse link
G Ift52 intraflagellar transport 52 located_in ISO
IEA 		(PMID:29899041)
GO_REF:0000107 		RGD
Ensembl		 PMID:29899041 GO_REF:0000107 NCBI chr 3:172,091,591...172,116,497
Ensembl chr 3:172,092,017...172,116,493 		JBrowse link
G LOC134484130 X-linked retinitis pigmentosa GTPase regulator-like located_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr  X:22,040,882...22,055,414
Ensembl chr  X:15,239,159...15,298,999 		JBrowse link
G Pex6 peroxisomal biogenesis factor 6 located_in ISO
IEA
ISS 		(PMID:26593283)
GO_REF:0000107
GO_REF:0000024 		RGD
Ensembl
UniProt		 PMID:26593283 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:21,755,747...21,767,939
Ensembl chr 9:21,755,751...21,767,908 		JBrowse link
G Rp1 RP1, axonemal microtubule associated located_in ISO
IEA 		(PMID:29899041)
GO_REF:0000107 		RGD
Ensembl		 PMID:29899041 GO_REF:0000107 NCBI chr 5:19,918,728...20,380,811
Ensembl chr 5:19,918,799...20,377,580 		JBrowse link
G Rpgr retinitis pigmentosa GTPase regulator located_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr  X:15,238,961...15,299,004
Ensembl chr  X:15,239,159...15,298,999 		JBrowse link
G Sdccag8 SHH signaling and ciliogenesis regulator SDCCAG8 located_in ISO
IEA 		(PMID:29899041)
GO_REF:0000107 		RGD
Ensembl		 PMID:29899041 GO_REF:0000107 NCBI chr13:91,286,787...91,518,255
Ensembl chr13:91,286,645...91,511,490 		JBrowse link
G Srpx sushi-repeat-containing protein, X-linked located_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr  X:15,349,498...15,420,389
Ensembl chr  X:15,349,440...15,420,392 		JBrowse link
G Ush1g USH1 protein network component sans located_in ISO
IEA 		(PMID:31637240)
GO_REF:0000107 		RGD
Ensembl		 PMID:31637240 GO_REF:0000107 NCBI chr10:101,055,923...101,062,753
Ensembl chr10:101,057,208...101,062,564 		JBrowse link
photoreceptor connecting cilium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AC131360.2 located_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 Ensembl chr18:29,459,249...29,482,399 JBrowse link
G Adgrv1 adhesion G protein-coupled receptor V1 located_in ISO (PMID:17906286) RGD PMID:17906286 NCBI chr 2:13,067,149...13,647,407
Ensembl chr 2:13,067,150...13,647,372 		JBrowse link
G Alpk1 alpha-kinase 1 located_in ISO (PMID:30967659) RGD PMID:30967659 NCBI chr 2:218,801,425...218,924,013
Ensembl chr 2:218,780,189...218,921,646 		JBrowse link
G Arl3 ARF like GTPase 3 located_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:12417528) 		UniProt
Ensembl
RGD		 PMID:12417528 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:255,342,078...255,388,087
Ensembl chr 1:255,342,076...255,388,279 		JBrowse link
G Bbs4 Bardet-Biedl syndrome 4 located_in ISO
IEA 		(PMID:23943788)
GO_REF:0000107 		RGD
Ensembl		 PMID:23943788 GO_REF:0000107 NCBI chr 8:68,627,739...68,661,232
Ensembl chr 8:68,627,656...68,661,358 		JBrowse link
G Cep290 centrosomal protein 290 located_in ISO (PMID:16632484), (PMID:16682973), (PMID:23943788) RGD PMID:16632484 PMID:16682973 PMID:23943788 NCBI chr 7:37,196,765...37,285,955
Ensembl chr 7:37,196,783...37,285,955 		JBrowse link
G Cetn1 centrin 1 located_in ISO
IEA 		(PMID:15347651), (PMID:30120214)
GO_REF:0000107 		RGD
Ensembl		 PMID:15347651 PMID:30120214 GO_REF:0000107 NCBI chr18:924,428...925,130
Ensembl chr18:922,112...925,332 		JBrowse link
G Cetn2 centrin 2 located_in ISO (PMID:15347651) RGD PMID:15347651 NCBI chr  X:155,812,212...155,817,186
Ensembl chr  X:155,812,003...155,817,744 		JBrowse link
G Cetn3 centrin 3 located_in ISO (PMID:15347651), (PMID:22031837), (PMID:24833722) RGD PMID:15347651 PMID:22031837 PMID:24833722 NCBI chr 2:13,817,760...13,837,502
Ensembl chr 2:13,824,803...13,837,502 		JBrowse link
G Cfap410 cilia and flagella associated protein 410 located_in ISO
IEA 		(PMID:26974433)
GO_REF:0000107 		RGD
Ensembl		 PMID:26974433 GO_REF:0000107 NCBI chr20:10,687,506...10,694,366
Ensembl chr20:10,687,506...10,694,366 		JBrowse link
G Fam161a FAM161 centrosomal protein A located_in
is_active_in 		IDA
ISO
IBA
IEA 		PMID:22940612
(PMID:22791751), (PMID:22940612), (PMID:24833722)
GO_REF:0000033
GO_REF:0000107
(PMID:22940612) 		RGD
GO_Central
Ensembl		 PMID:22791751 PMID:22940612 PMID:24833722 PMID:22940612 GO_REF:0000033 GO_REF:0000107, RGD:8553427 NCBI chr14:101,210,694...101,256,020
Ensembl chr14:101,210,662...101,229,535 		JBrowse link
G Gnat1 G protein subunit alpha transducin 1 located_in ISO
IEA 		(PMID:17881533)
GO_REF:0000107 		RGD
Ensembl		 PMID:17881533 GO_REF:0000107 NCBI chr 8:117,229,575...117,234,311
Ensembl chr 8:117,229,575...117,234,311 		JBrowse link
G Ift122 intraflagellar transport 122 located_in ISO (PMID:19208653) RGD PMID:19208653 NCBI chr 4:150,577,525...150,648,052
Ensembl chr 4:150,539,786...150,648,052 		JBrowse link
G Ift140 intraflagellar transport 140 located_in ISO
IEA 		(PMID:20368623), (PMID:24619649)
GO_REF:0000107 		RGD
Ensembl		 PMID:20368623 PMID:24619649 GO_REF:0000107 NCBI chr10:14,537,134...14,624,926
Ensembl chr10:14,537,466...14,624,926 		JBrowse link
G Ift20 intraflagellar transport 20 located_in ISO
IEA 		(PMID:31637240)
GO_REF:0000107
(PMID:21307337) 		RGD
Ensembl		 PMID:21307337 PMID:31637240 GO_REF:0000107 NCBI chr10:63,930,629...63,936,174
Ensembl chr10:63,930,681...63,936,172 		JBrowse link
G Ift52 intraflagellar transport 52 located_in ISO
IEA 		(PMID:31637240)
GO_REF:0000107
(PMID:20368623) 		RGD
Ensembl		 PMID:20368623 PMID:31637240 GO_REF:0000107 NCBI chr 3:172,091,591...172,116,497
Ensembl chr 3:172,092,017...172,116,493 		JBrowse link
G Ift57 intraflagellar transport 57 located_in ISO
IEA 		(PMID:31637240)
GO_REF:0000107
(PMID:20368623) 		RGD
Ensembl		 PMID:20368623 PMID:31637240 GO_REF:0000107 NCBI chr11:64,528,349...64,593,545
Ensembl chr11:64,528,349...64,593,545 		JBrowse link
G Ift88 intraflagellar transport 88 located_in ISO (PMID:19208653), (PMID:20368623) RGD PMID:19208653 PMID:20368623 NCBI chr15:35,685,678...35,786,875
Ensembl chr15:35,688,927...35,781,634 		JBrowse link
G Iqcb1 IQ motif containing B1 located_in ISO
IEA 		(PMID:15723066)
GO_REF:0000117
GO_REF:0000107 		RGD
UniProt
Ensembl		 PMID:15723066 GO_REF:0000107 GO_REF:0000117 NCBI chr11:77,410,986...77,465,540
Ensembl chr11:77,410,314...77,465,478 		JBrowse link
G Kiaa1549 KIAA1549 homolog located_in ISO
IEA 		(PMID:30120214)
GO_REF:0000107 		RGD
Ensembl		 PMID:30120214 GO_REF:0000107 NCBI chr 4:67,807,635...67,935,303
Ensembl chr 4:67,811,803...67,935,360 		JBrowse link
G Kif17 kinesin family member 17 located_in ISO
IEA 		(PMID:19384852)
GO_REF:0000107 		RGD
Ensembl		 PMID:19384852 GO_REF:0000107 NCBI chr 5:155,765,592...155,802,941
Ensembl chr 5:155,765,592...155,803,247 		JBrowse link
G Kif3a kinesin family member 3a located_in ISO (PMID:19208653) RGD PMID:19208653 NCBI chr10:38,226,388...38,263,062
Ensembl chr10:38,226,741...38,260,516 		JBrowse link
G Kifap3 kinesin-associated protein 3 located_in ISO
IEA 		(PMID:19384852)
GO_REF:0000107 		RGD
Ensembl		 PMID:19384852 GO_REF:0000107 NCBI chr13:78,660,849...78,797,821
Ensembl chr13:78,660,871...78,797,820 		JBrowse link
G Lca5 lebercilin LCA5 located_in ISO
IEA
IDA 		(PMID:21606596)
GO_REF:0000107
PMID:17546029 		RGD
Ensembl		 PMID:21606596 PMID:17546029 GO_REF:0000107, RGD:14397561 NCBI chr 8:93,187,735...93,255,060
Ensembl chr 8:93,197,702...93,254,991 		JBrowse link
G Mak male germ cell-associated kinase located_in IEA
ISO 		GO_REF:0000107
(PMID:21148103) 		Ensembl
RGD		 PMID:21148103 GO_REF:0000107 NCBI chr17:23,889,417...23,936,857
Ensembl chr17:23,889,516...23,936,855 		JBrowse link
G Myo7a myosin VIIA located_in ISO
IEA 		(PMID:10414956)
GO_REF:0000107 		RGD
Ensembl		 PMID:10414956 GO_REF:0000107 NCBI chr 1:161,755,110...161,825,397
Ensembl chr 1:161,755,110...161,825,365 		JBrowse link
G Nphp1 nephrocystin 1 located_in ISO (PMID:16885411) RGD PMID:16885411 NCBI chr 3:135,413,927...135,469,505
Ensembl chr 3:135,413,927...135,469,505 		JBrowse link
G Nphp4 nephrocystin 4 located_in ISO
IEA 		(PMID:21078623)
GO_REF:0000107 		RGD
Ensembl		 PMID:21078623 GO_REF:0000107 NCBI chr 5:168,270,522...168,356,393
Ensembl chr 5:168,271,073...168,358,242 		JBrowse link
G Pcdhb22 protocadherin beta 22 located_in ISO (PMID:18279309) RGD PMID:18279309 NCBI chr18:29,497,038...29,503,142
Ensembl chr18:29,495,389...29,503,336 		JBrowse link
G Poc5 POC5 centriolar protein is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:29,454,392...29,483,468
Ensembl chr 2:29,454,272...29,485,309 		JBrowse link
G Rab37 RAB37, member RAS oncogene family located_in ISO (PMID:38536817) RGD PMID:38536817 NCBI chr10:100,833,240...100,900,950
Ensembl chr10:100,833,397...100,900,944 		JBrowse link
G Rp1 RP1, axonemal microtubule associated located_in
is_active_in 		ISO
IEA
IBA 		(PMID:11767049)
GO_REF:0000117
GO_REF:0000033
GO_REF:0000107
(PMID:11773008), (PMID:14507858) 		RGD
UniProt
GO_Central
Ensembl		 PMID:11767049 PMID:11773008 PMID:14507858 GO_REF:0000033 GO_REF:0000107 GO_REF:0000117 NCBI chr 5:19,918,728...20,380,811
Ensembl chr 5:19,918,799...20,377,580 		JBrowse link
G Rp1l1 RP1 like 1 located_in
is_active_in 		ISO
IBA
IEA 		(PMID:19657028)
GO_REF:0000033
GO_REF:0000107 		RGD
GO_Central
Ensembl		 PMID:19657028 GO_REF:0000033 GO_REF:0000107 NCBI chr15:42,435,803...42,447,165
Ensembl chr15:42,435,803...42,447,165 		JBrowse link
G Rpgr retinitis pigmentosa GTPase regulator located_in IEA
ISO 		GO_REF:0000107
(PMID:10725384), (PMID:38536817) 		Ensembl
RGD		 PMID:10725384 PMID:38536817 GO_REF:0000107 NCBI chr  X:15,238,961...15,299,004
Ensembl chr  X:15,239,159...15,298,999 		JBrowse link
G Rpgrip1 RPGR interacting protein 1 located_in
is_active_in 		ISO
IBA 		(PMID:25398945)
GO_REF:0000033 		RGD
GO_Central		 PMID:25398945 GO_REF:0000033 NCBI chr15:27,282,997...27,341,021
Ensembl chr15:27,282,998...27,341,021 		JBrowse link
G Rpgrip1l Rpgrip1-like is_active_in IDA
IBA 		GO_REF:0000033 GO_Central
RGD		 PMID:17558407 GO_REF:0000033, RGD:11537356 NCBI chr19:31,865,050...31,957,930
Ensembl chr19:31,865,231...31,957,930 		JBrowse link
G Septin2 septin 2 located_in ISO
IEA 		(PMID:23572511)
GO_REF:0000107 		RGD
Ensembl		 PMID:23572511 GO_REF:0000107 NCBI chr 9:101,465,535...101,498,766
Ensembl chr 9:101,465,650...101,498,759 		JBrowse link
G Spata7 spermatogenesis associated 7 located_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:25398945) 		UniProt
Ensembl
RGD		 PMID:25398945 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:123,609,519...123,655,001
Ensembl chr 6:123,609,535...123,655,001 		JBrowse link
G Sptbn5 spectrin, beta, non-erythrocytic 5 located_in ISO
IEA 		(PMID:23704327)
GO_REF:0000107 		RGD
Ensembl		 PMID:23704327 GO_REF:0000107 NCBI chr 3:127,467,137...127,511,814
Ensembl chr 3:127,466,932...127,508,860 		JBrowse link
G Tbcc tubulin folding cofactor C located_in ISO
IEA 		(PMID:12417528)
GO_REF:0000107 		RGD
Ensembl		 PMID:12417528 GO_REF:0000107 NCBI chr 9:21,596,472...21,597,660
Ensembl chr 9:21,595,615...21,597,842 		JBrowse link
G Tmem237 transmembrane protein 237 located_in ISO (PMID:20375344) RGD PMID:20375344 NCBI chr 9:68,027,481...68,066,731
Ensembl chr 9:68,030,664...68,063,525 		JBrowse link
G Topors TOP1 binding arginine/serine rich protein, E3 ubiquitin ligase located_in
is_active_in 		ISO
IEA
IBA 		(PMID:21159800)
GO_REF:0000117
GO_REF:0000107
GO_REF:0000033 		RGD
UniProt
Ensembl
GO_Central		 PMID:21159800 GO_REF:0000033 GO_REF:0000107 GO_REF:0000117 NCBI chr 5:60,184,076...60,195,979
Ensembl chr 5:60,182,035...60,194,706 		JBrowse link
G Tsga10ip testis specific 10 interacting protein is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:212,129,921...212,144,784
Ensembl chr 1:212,129,923...212,144,209 		JBrowse link
G Ttc8 tetratricopeptide repeat domain 8 located_in ISO
IEA 		(PMID:14520415)
GO_REF:0000107 		RGD
Ensembl		 PMID:14520415 GO_REF:0000107 NCBI chr 6:123,927,657...124,025,354
Ensembl chr 6:123,927,907...123,982,117 		JBrowse link
G Ush1g USH1 protein network component sans located_in ISO
IEA 		(PMID:17906286)
GO_REF:0000107 		RGD
Ensembl		 PMID:17906286 GO_REF:0000107 NCBI chr10:101,055,923...101,062,753
Ensembl chr10:101,057,208...101,062,564 		JBrowse link
G Ush2a usherin located_in IDA
IEA
ISO 		GO_REF:0000117
(PMID:17906286), (PMID:21212183)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:17906286 PMID:21212183 PMID:16434480 GO_REF:0000107 GO_REF:0000117, RGD:1600128 NCBI chr13:102,368,783...103,035,230
Ensembl chr13:102,368,783...103,035,217 		JBrowse link
G Wdr19 WD repeat domain 19 located_in ISO
IEA 		(PMID:19208653)
GO_REF:0000107 		RGD
Ensembl		 PMID:19208653 GO_REF:0000107 NCBI chr14:43,396,130...43,460,012
Ensembl chr14:43,397,835...43,459,939 		JBrowse link
G Whrn whirlin located_in IDA
IEA
ISO 		GO_REF:0000117
(PMID:17906286), (PMID:21212183)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:17906286 PMID:21212183 PMID:16434480 GO_REF:0000107 GO_REF:0000117, RGD:1600128 NCBI chr 5:81,843,820...81,933,400
Ensembl chr 5:81,843,820...81,927,381 		JBrowse link
photoreceptor disc membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AC131360.2 located_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 Ensembl chr18:29,459,249...29,482,399 JBrowse link
G Rho rhodopsin located_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:25664179)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:25664179 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:150,653,205...150,658,367
Ensembl chr 4:150,653,205...150,658,367 		JBrowse link
G Sptbn5 spectrin, beta, non-erythrocytic 5 located_in ISO
IEA 		(PMID:23704327)
GO_REF:0000107 		RGD
Ensembl		 PMID:23704327 GO_REF:0000107 NCBI chr 3:127,467,137...127,511,814
Ensembl chr 3:127,466,932...127,508,860 		JBrowse link
photoreceptor distal connecting cilium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahi1 Abelson helper integration site 1 located_in ISO (PMID:29899041) RGD PMID:29899041 NCBI chr 1:17,580,859...17,711,775
Ensembl chr 1:17,582,006...17,711,774 		JBrowse link
G Cep290 centrosomal protein 290 located_in ISO (PMID:29899041) RGD PMID:29899041 NCBI chr 7:37,196,765...37,285,955
Ensembl chr 7:37,196,783...37,285,955 		JBrowse link
G Nphp1 nephrocystin 1 located_in ISO (PMID:29899041) RGD PMID:29899041 NCBI chr 3:135,413,927...135,469,505
Ensembl chr 3:135,413,927...135,469,505 		JBrowse link
G Nphp4 nephrocystin 4 located_in ISO
IEA 		(PMID:29899041)
GO_REF:0000107 		RGD
Ensembl		 PMID:29899041 GO_REF:0000107 NCBI chr 5:168,270,522...168,356,393
Ensembl chr 5:168,271,073...168,358,242 		JBrowse link
G Rpgr retinitis pigmentosa GTPase regulator located_in ISO
IEA 		(PMID:29899041)
GO_REF:0000107 		RGD
Ensembl		 PMID:29899041 GO_REF:0000107 NCBI chr  X:15,238,961...15,299,004
Ensembl chr  X:15,239,159...15,298,999 		JBrowse link
G Rpgrip1 RPGR interacting protein 1 located_in ISO (PMID:29899041) RGD PMID:29899041 NCBI chr15:27,282,997...27,341,021
Ensembl chr15:27,282,998...27,341,021 		JBrowse link
G Spata7 spermatogenesis associated 7 located_in
is_active_in 		IEA
IBA
ISO 		GO_REF:0000107
GO_REF:0000033
MGI:5660490 (PMID:29899041) 		Ensembl
GO_Central
RGD		 PMID:29899041 GO_REF:0000033 GO_REF:0000107 NCBI chr 6:123,609,519...123,655,001
Ensembl chr 6:123,609,535...123,655,001 		JBrowse link
photoreceptor outer segment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca4 ATP binding cassette subfamily A member 4 located_in ISO (PMID:23943788), (PMID:9202155) RGD PMID:9202155 PMID:23943788 NCBI chr 2:212,849,470...212,986,730
Ensembl chr 2:212,755,803...212,986,729 		JBrowse link
G Ahi1 Abelson helper integration site 1 located_in ISO (PMID:20592197) RGD PMID:20592197 NCBI chr 1:17,580,859...17,711,775
Ensembl chr 1:17,582,006...17,711,774 		JBrowse link
G Arr3 arrestin 3 located_in IEA
ISO 		GO_REF:0000107
GO_REF:0000044
(PMID:10725384), (PMID:12486395) 		Ensembl
UniProt
RGD		 PMID:10725384 PMID:12486395 GO_REF:0000044 GO_REF:0000107 NCBI chr  X:69,739,959...69,752,300
Ensembl chr  X:69,739,760...69,752,200 		JBrowse link
G Arrb2 arrestin, beta 2 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr10:55,645,539...55,653,485
Ensembl chr10:55,645,357...55,653,487 		JBrowse link
G Bbs4 Bardet-Biedl syndrome 4 located_in ISO
IEA 		(PMID:23943788)
GO_REF:0000107 		RGD
Ensembl		 PMID:23943788 GO_REF:0000107 NCBI chr 8:68,627,739...68,661,232
Ensembl chr 8:68,627,656...68,661,358 		JBrowse link
G Bbs7 Bardet-Biedl syndrome 7 located_in ISO
IEA 		(PMID:23943788)
GO_REF:0000107 		RGD
Ensembl		 PMID:23943788 GO_REF:0000107 NCBI chr 2:121,362,884...121,402,473
Ensembl chr 2:121,362,885...121,402,473 		JBrowse link
G Bsg basigin located_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:25957687)
GO_REF:0000044 		UniProt
RGD		 PMID:25957687 GO_REF:0000024 GO_REF:0000044 NCBI chr 7:10,643,788...10,651,005
Ensembl chr 7:10,643,789...10,651,005 		JBrowse link
G Cacna1f calcium voltage-gated channel subunit alpha1 F IDA RGD PMID:11526344 RGD:632484 NCBI chr  X:17,539,992...17,568,308
Ensembl chr  X:17,539,920...17,568,308 		JBrowse link
G Cep250 centrosomal protein 250 located_in ISO
IEA 		(PMID:28005958)
GO_REF:0000107 		RGD
Ensembl		 PMID:28005958 GO_REF:0000107 NCBI chr 3:164,931,033...164,976,210
Ensembl chr 3:164,931,066...164,976,210 		JBrowse link
G Cep290 centrosomal protein 290 located_in ISO (PMID:23943788) RGD PMID:23943788 NCBI chr 7:37,196,765...37,285,955
Ensembl chr 7:37,196,783...37,285,955 		JBrowse link
G Cerkl CERK like autophagy regulator located_in ISO
IEA 		(PMID:23142158)
GO_REF:0000107 		RGD
Ensembl		 PMID:23142158 GO_REF:0000107 NCBI chr 3:84,641,121...84,747,999
Ensembl chr 3:84,645,696...84,747,688 		JBrowse link
G Cfap410 cilia and flagella associated protein 410 located_in ISO
IEA 		(PMID:27548899)
GO_REF:0000107 		RGD
Ensembl		 PMID:27548899 GO_REF:0000107 NCBI chr20:10,687,506...10,694,366
Ensembl chr20:10,687,506...10,694,366 		JBrowse link
G Cib2 calcium and integrin binding family member 2 located_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000044
GO_REF:0000107
(PMID:23023331) 		UniProt
Ensembl
RGD		 PMID:23023331 GO_REF:0000024 GO_REF:0000044 GO_REF:0000107 NCBI chr 8:63,826,410...63,843,301
Ensembl chr 8:63,826,411...63,843,277 		JBrowse link
G Cnga1 cyclic nucleotide gated channel subunit alpha 1 located_in ISO
IEA 		(PMID:10725384), (PMID:15634774), (PMID:20592197)
GO_REF:0000107 		RGD
Ensembl		 PMID:10725384 PMID:15634774 PMID:20592197 GO_REF:0000107 NCBI chr14:35,920,948...35,959,065
Ensembl chr14:35,926,854...35,959,056 		JBrowse link
G Cnga3 cyclic nucleotide gated channel subunit alpha 3 located_in ISO (PMID:15634774) RGD PMID:15634774 NCBI chr 9:46,943,353...46,989,862
Ensembl chr 9:46,928,810...46,989,862 		JBrowse link
G Cngb1 cyclic nucleotide gated channel subunit beta 1 is_active_in
located_in 		IBA
IEA
ISO 		GO_REF:0000033
GO_REF:0000107
(PMID:22183407) 		GO_Central
Ensembl
RGD		 PMID:22183407 GO_REF:0000033 GO_REF:0000107 NCBI chr19:9,732,646...9,798,864
Ensembl chr19:9,732,646...9,797,224 		JBrowse link
G Cngb3 cyclic nucleotide gated channel subunit beta 3 is_active_in
located_in 		IBA
IEA
ISO 		GO_REF:0000033
GO_REF:0000107
(PMID:15634774) 		GO_Central
Ensembl
RGD		 PMID:15634774 GO_REF:0000033 GO_REF:0000107 NCBI chr 5:37,543,903...37,792,030
Ensembl chr 5:37,543,903...37,792,030 		JBrowse link
G Crb1 crumbs cell polarity complex component 1 located_in ISO
IEA 		(PMID:15316081)
GO_REF:0000044
GO_REF:0000107 		RGD
UniProt
Ensembl		 PMID:15316081 GO_REF:0000044 GO_REF:0000107 NCBI chr13:53,352,932...53,540,019
Ensembl chr13:53,352,932...53,540,019 		JBrowse link
G Gnat1 G protein subunit alpha transducin 1 located_in IDA
IEA
ISO 		GO_REF:0000107
(PMID:18367617), (PMID:20592197), (PMID:31696965)
(PMID:2534964) 		Ensembl
RGD		 PMID:2534964 PMID:18367617 PMID:20592197 PMID:31696965 PMID:11931744 More... GO_REF:0000107, RGD:1599009, RGD:6893629 NCBI chr 8:117,229,575...117,234,311
Ensembl chr 8:117,229,575...117,234,311 		JBrowse link
G Gnat2 G protein subunit alpha transducin 2 located_in
is_active_in 		IDA
IEA
IBA
ISO 		GO_REF:0000107
GO_REF:0000033
(PMID:2534964) 		Ensembl
GO_Central
RGD		 PMID:2534964 PMID:17591908 GO_REF:0000033 GO_REF:0000107, RGD:2302146 NCBI chr 2:198,414,568...198,431,532
Ensembl chr 2:198,414,920...198,424,022 		JBrowse link
G Gnb1 G protein subunit beta 1 located_in ISO (PMID:18367617) RGD PMID:18367617 NCBI chr 5:171,357,778...171,424,489
Ensembl chr 5:171,357,797...171,424,488 		JBrowse link
G Gngt1 G protein subunit gamma transducin 1 IDA RGD PMID:11931744 PMID:10396627 RGD:1599009, RGD:6893629 NCBI chr 4:32,960,945...32,963,930
Ensembl chr 4:32,960,945...32,963,930 		JBrowse link
G Grk1 G protein-coupled receptor kinase 1 located_in ISO
IEA 		(PMID:22183407)
GO_REF:0000044 		RGD
UniProt		 PMID:22183407 GO_REF:0000044 NCBI chr16:82,821,184...82,837,971
Ensembl chr16:82,826,022...82,837,971 		JBrowse link
G Guca1a guanylate cyclase activator 1A located_in IDA
IEA
ISO 		GO_REF:0000117
GO_REF:0000044
GO_REF:0000107
(PMID:22183407) 		UniProt
Ensembl
RGD		 PMID:22183407 PMID:9620085 GO_REF:0000044 GO_REF:0000107 GO_REF:0000117, RGD:1599354 NCBI chr 9:21,080,782...21,096,221
Ensembl chr 9:21,086,642...21,096,221 		JBrowse link
G Guca1b guanylate cyclase activator 1B located_in IDA
IEA
ISO 		GO_REF:0000117
GO_REF:0000044
GO_REF:0000107
(PMID:22183407) 		UniProt
Ensembl
RGD		 PMID:22183407 PMID:9620085 GO_REF:0000044 GO_REF:0000107 GO_REF:0000117, RGD:1599354 NCBI chr 9:21,097,274...21,105,107
Ensembl chr 9:21,097,274...21,105,107 		JBrowse link
G Gucy2e guanylate cyclase 2E located_in ISO
IEA 		(PMID:7912093)
GO_REF:0000107 		RGD
Ensembl		 PMID:7912093 GO_REF:0000107 NCBI chr10:54,453,753...54,478,639
Ensembl chr10:54,457,844...54,472,898 		JBrowse link
G Hnf1a HNF1 homeobox A located_in ISO
IEA 		MGI:96770 (PMID:10090727)
GO_REF:0000107 		RGD
Ensembl		 PMID:10090727 GO_REF:0000107 NCBI chr12:47,299,171...47,333,457
Ensembl chr12:47,306,245...47,332,755 		JBrowse link
G Ift20 intraflagellar transport 20 located_in ISO
IEA 		(PMID:21307337)
GO_REF:0000107 		RGD
Ensembl		 PMID:21307337 GO_REF:0000107 NCBI chr10:63,930,629...63,936,174
Ensembl chr10:63,930,681...63,936,172 		JBrowse link
G Impg1 interphotoreceptor matrix proteoglycan 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 8:90,123,821...90,269,903
Ensembl chr 8:90,123,821...90,269,903 		JBrowse link
G Inha inhibin subunit alpha IDA RGD PMID:7596220 RGD:2290440 NCBI chr 9:84,443,109...84,446,010
Ensembl chr 9:84,443,109...84,446,009 		JBrowse link
G Iqcb1 IQ motif containing B1 located_in ISO
IEA 		(PMID:15723066)
GO_REF:0000107 		RGD
Ensembl		 PMID:15723066 GO_REF:0000107 NCBI chr11:77,410,986...77,465,540
Ensembl chr11:77,410,314...77,465,478 		JBrowse link
G Kif17 kinesin family member 17 located_in ISO
IEA 		(PMID:19384852)
GO_REF:0000107 		RGD
Ensembl		 PMID:19384852 GO_REF:0000107 NCBI chr 5:155,765,592...155,802,941
Ensembl chr 5:155,765,592...155,803,247 		JBrowse link
G Kifap3 kinesin-associated protein 3 located_in ISO
IEA 		(PMID:19384852)
GO_REF:0000107 		RGD
Ensembl		 PMID:19384852 GO_REF:0000107 NCBI chr13:78,660,849...78,797,821
Ensembl chr13:78,660,871...78,797,820 		JBrowse link
G Lyar Ly1 antibody reactive located_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000044
(PMID:25735755)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:25735755 GO_REF:0000024 GO_REF:0000044 GO_REF:0000107 NCBI chr14:76,789,193...76,802,973
Ensembl chr14:76,789,200...76,802,765 		JBrowse link
G Magi2 membrane associated guanylate kinase, WW and PDZ domain containing 2 located_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000044
(PMID:24608321) 		UniProt
RGD		 PMID:24608321 GO_REF:0000024 GO_REF:0000044 NCBI chr 4:15,278,518...16,762,427
Ensembl chr 4:15,278,518...16,762,199 		JBrowse link
G Mak male germ cell-associated kinase located_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000044
(PMID:21148103)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:21148103 GO_REF:0000024 GO_REF:0000044 GO_REF:0000107 NCBI chr17:23,889,417...23,936,857
Ensembl chr17:23,889,516...23,936,855 		JBrowse link
G Map1a microtubule-associated protein 1A located_in ISO (PMID:24664738) RGD PMID:24664738 NCBI chr 3:128,716,907...128,736,638
Ensembl chr 3:128,716,940...128,740,159 		JBrowse link
G Map1b microtubule-associated protein 1B located_in ISO
IEA 		(PMID:24664738)
GO_REF:0000107 		RGD
Ensembl		 PMID:24664738 GO_REF:0000107 NCBI chr 2:32,551,423...32,644,471
Ensembl chr 2:32,551,423...32,657,094 		JBrowse link
G Mertk MER proto-oncogene, tyrosine kinase IDA RGD PMID:11861639 RGD:1299193 NCBI chr 3:136,391,936...136,498,366
Ensembl chr 3:136,383,560...136,500,192 		JBrowse link
G Myo3b myosin IIIB located_in ISO (PMID:19332056) RGD PMID:19332056 NCBI chr 3:75,228,017...75,636,272
Ensembl chr 3:75,228,017...75,636,272 		JBrowse link
G Myo5a myosin VA located_in ISO (PMID:14978221) RGD PMID:14978221 NCBI chr 8:84,692,524...84,860,564
Ensembl chr 8:84,692,910...84,856,265 		JBrowse link
G Myo7a myosin VIIA located_in
NOT|located_in 		ISO (PMID:8842737) RGD PMID:8842737 NCBI chr 1:161,755,110...161,825,397
Ensembl chr 1:161,755,110...161,825,365 		JBrowse link
G Myrip myosin VIIA and Rab interacting protein located_in ISO (PMID:11964381) RGD PMID:11964381 NCBI chr 8:128,895,371...129,062,420
Ensembl chr 8:128,895,371...129,062,420 		JBrowse link
G Nup42 nucleoporin 42 located_in ISO (PMID:22183407) RGD PMID:22183407 NCBI chr 4:11,877,957...11,894,991
Ensembl chr 4:11,877,957...11,894,991 		JBrowse link
G Ocrl OCRL, inositol polyphosphate-5-phosphatase located_in ISO
IEA 		(PMID:22543976)
GO_REF:0000044 		RGD
UniProt		 PMID:22543976 GO_REF:0000044 NCBI chr  X:131,955,775...132,018,298
Ensembl chr  X:131,967,355...132,018,298 		JBrowse link
G Opn1mw opsin 1, medium wave sensitive located_in
is_active_in 		IDA
IEA
IBA
ISO 		GO_REF:0000117
GO_REF:0000107
GO_REF:0000033
(PMID:10725384), (PMID:12651948), (PMID:19332056), (PMID:23351594), (PMID:23386608) 		UniProt
Ensembl
GO_Central
RGD		 PMID:10725384 PMID:12651948 PMID:19332056 PMID:23351594 PMID:23386608 More... GO_REF:0000033 GO_REF:0000107 GO_REF:0000117, RGD:6893562 NCBI chr  X:157,056,355...157,076,716
Ensembl chr  X:157,056,355...157,076,716 		JBrowse link
G Opn1sw opsin 1, short wave sensitive located_in
is_active_in 		IDA
IEA
IBA
ISO 		GO_REF:0000117
GO_REF:0000107
GO_REF:0000044
GO_REF:0000033
(PMID:10725384), (PMID:12651948), (PMID:19332056), (PMID:22183407), (PMID:23351594), (PMID:23386608), (PMID:26420485) 		UniProt
Ensembl
GO_Central
RGD		 PMID:10725384 PMID:12651948 PMID:19332056 PMID:22183407 PMID:23351594 More... GO_REF:0000033 GO_REF:0000044 GO_REF:0000107 GO_REF:0000117, RGD:6893562 NCBI chr 4:58,942,685...58,945,825
Ensembl chr 4:58,942,681...58,945,825 		JBrowse link
G Opn3 opsin 3 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:90,121,560...90,152,076
Ensembl chr13:90,121,560...90,152,076 		JBrowse link
G Opn5 opsin 5 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:25,865,610...25,913,315
Ensembl chr 9:25,865,610...25,913,315 		JBrowse link
G Pcare photoreceptor cilium actin regulator is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:29,469,232...29,478,541
Ensembl chr 6:29,469,817...29,478,541 		JBrowse link
G Pcdh15 protocadherin related 15 located_in ISO
IEA 		(PMID:14570705)
GO_REF:0000117
GO_REF:0000107 		RGD
UniProt
Ensembl		 PMID:14570705 GO_REF:0000107 GO_REF:0000117 NCBI chr20:13,996,383...15,495,206
Ensembl chr20:13,999,116...15,493,958 		JBrowse link
G Pdc phosducin is_active_in
located_in 		IBA
IEA
ISO 		GO_REF:0000033
GO_REF:0000044
GO_REF:0000107
(PMID:18367617) 		GO_Central
UniProt
Ensembl
RGD		 PMID:18367617 GO_REF:0000033 GO_REF:0000044 GO_REF:0000107 NCBI chr13:64,847,366...64,921,865
Ensembl chr13:64,908,307...64,921,865 		JBrowse link
G Pde6b phosphodiesterase 6B located_in ISO
IEA 		(PMID:22183407)
GO_REF:0000107 		RGD
Ensembl		 PMID:22183407 GO_REF:0000107 NCBI chr14:1,468,302...1,511,435
Ensembl chr14:1,468,302...1,511,435 		JBrowse link
G Pex6 peroxisomal biogenesis factor 6 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 9:21,755,747...21,767,939
Ensembl chr 9:21,755,751...21,767,908 		JBrowse link
G Pip4k2a phosphatidylinositol-5-phosphate 4-kinase type 2 alpha located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr17:86,405,080...86,576,597
Ensembl chr17:86,405,081...86,576,430 		JBrowse link
G Prcd photoreceptor disc component located_in ISO (PMID:23672200) RGD PMID:23672200 NCBI chr10:102,386,025...102,406,485
Ensembl chr10:102,385,826...102,390,987 		JBrowse link
G Prom1 prominin 1 located_in ISO (PMID:19228982) RGD PMID:19228982 NCBI chr14:71,202,303...71,307,008
Ensembl chr14:71,202,336...71,307,002 		JBrowse link
G Prph peripherin located_in ISO (PMID:22183407) RGD PMID:22183407 NCBI chr 7:132,096,888...132,101,070
Ensembl chr 7:132,097,285...132,101,068 		JBrowse link
G Prph2 peripherin 2 located_in ISO
IEA 		(PMID:22183407), (PMID:26420485), (PMID:28053051)
GO_REF:0000044
GO_REF:0000107 		RGD
UniProt
Ensembl		 PMID:22183407 PMID:26420485 PMID:28053051 GO_REF:0000044 GO_REF:0000107 NCBI chr 9:21,563,770...21,579,074
Ensembl chr 9:21,563,777...21,579,074 		JBrowse link
G Ptgs1 prostaglandin-endoperoxide synthase 1 located_in IEA
ISO 		GO_REF:0000107
(PMID:12355421) 		Ensembl
RGD		 PMID:12355421 GO_REF:0000107 NCBI chr 3:39,981,419...40,002,993
Ensembl chr 3:39,981,415...40,002,990 		JBrowse link
G Ptprk protein tyrosine phosphatase, receptor type, K located_in ISO (PMID:18308476) RGD PMID:18308476 NCBI chr 1:18,557,091...19,056,297
Ensembl chr 1:18,558,365...19,056,107 		JBrowse link
G Rab27a RAB27A, member RAS oncogene family located_in ISO
IEA 		(PMID:11964381)
GO_REF:0000107 		RGD
Ensembl		 PMID:11964381 GO_REF:0000107 NCBI chr 8:82,663,373...82,717,267
Ensembl chr 8:82,663,276...82,717,262 		JBrowse link
G Rapgef4 Rap guanine nucleotide exchange factor 4 IDA RGD PMID:19883736 RGD:2314691 NCBI chr 3:77,217,024...77,509,933
Ensembl chr 3:77,217,039...77,509,978 		JBrowse link
G Rd3 RD3 regulator of GUCY2D located_in ISO
IEA 		(PMID:29515371)
GO_REF:0000107 		RGD
Ensembl		 PMID:29515371 GO_REF:0000107 NCBI chr13:106,060,657...106,097,063
Ensembl chr13:106,084,171...106,093,540 		JBrowse link
G Rho rhodopsin located_in
is_active_in 		IDA
IEA
IBA
ISO 		GO_REF:0000117
GO_REF:0000107
GO_REF:0000044
GO_REF:0000033
(PMID:10725384), (PMID:12651948), (PMID:20592197), (PMID:21212183), (PMID:22183407), (PMID:22869374), (PMID:23351594), (PMID:23943788), (PMID:25224828), (PMID:26420485)
(PMID:11767049), (PMID:23704327) 		UniProt
Ensembl
GO_Central
RGD		 PMID:10725384 PMID:11767049 PMID:12651948 PMID:20592197 PMID:21212183 More... GO_REF:0000033 GO_REF:0000044 GO_REF:0000107 GO_REF:0000117, RGD:6893595 NCBI chr 4:150,653,205...150,658,367
Ensembl chr 4:150,653,205...150,658,367 		JBrowse link
G Rom1 retinal outer segment membrane protein 1 located_in ISO
IEA 		(PMID:20592197), (PMID:22183407), (PMID:26420485)
GO_REF:0000107 		RGD
Ensembl		 PMID:20592197 PMID:22183407 PMID:26420485 GO_REF:0000107 NCBI chr 1:215,253,155...215,255,163
Ensembl chr 1:215,253,159...215,255,163 		JBrowse link
G Rp1 RP1, axonemal microtubule associated located_in ISO
IEA 		(PMID:14507858), (PMID:15269252)
GO_REF:0000044
GO_REF:0000107 		RGD
UniProt
Ensembl		 PMID:14507858 PMID:15269252 GO_REF:0000044 GO_REF:0000107 NCBI chr 5:19,918,728...20,380,811
Ensembl chr 5:19,918,799...20,377,580 		JBrowse link
G Rp1l1 RP1 like 1 located_in ISO
IEA 		(PMID:19657028)
GO_REF:0000107 		RGD
Ensembl		 PMID:19657028 GO_REF:0000107 NCBI chr15:42,435,803...42,447,165
Ensembl chr15:42,435,803...42,447,165 		JBrowse link
G Rpgr retinitis pigmentosa GTPase regulator located_in ISO (PMID:12140192) RGD PMID:12140192 NCBI chr  X:15,238,961...15,299,004
Ensembl chr  X:15,239,159...15,298,999 		JBrowse link
G Sag S-antigen visual arrestin located_in
is_active_in 		IDA
IEA
IBA
ISO 		GO_REF:0000117
GO_REF:0000044
GO_REF:0000033
(PMID:22869374)
GO_REF:0000107
(PMID:3720866) 		UniProt
GO_Central
RGD
Ensembl		 PMID:3720866 PMID:22869374 PMID:10396627 GO_REF:0000033 GO_REF:0000044 GO_REF:0000107 GO_REF:0000117, RGD:6893629 NCBI chr 9:95,915,640...95,956,641
Ensembl chr 9:95,917,197...95,956,507 		JBrowse link
G Shank2 SH3 and multiple ankyrin repeat domains 2 located_in ISS
ISO 		GO_REF:0000024
(PMID:19299912) 		BHF-UCL
RGD		 PMID:19299912 GO_REF:0000024 NCBI chr 1:208,575,144...209,020,300
Ensembl chr 1:208,598,772...209,018,736 		JBrowse link
G Spata7 spermatogenesis associated 7 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 6:123,609,519...123,655,001
Ensembl chr 6:123,609,535...123,655,001 		JBrowse link
G Stx3 syntaxin 3 located_in ISS
ISO 		GO_REF:0000024
(PMID:33974130) 		UniProt
RGD		 PMID:33974130 GO_REF:0000024 NCBI chr 1:217,940,697...218,114,865
Ensembl chr 1:217,909,169...218,110,466 		JBrowse link
G Tmem30a transmembrane protein 30A located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 8:89,608,975...89,637,421
Ensembl chr 8:89,608,975...89,633,291 		JBrowse link
G Tulp1 TUB like protein 1 located_in ISO
IEA 		(PMID:19218615)
GO_REF:0000107 		RGD
Ensembl		 PMID:19218615 GO_REF:0000107 NCBI chr20:6,413,901...6,425,833
Ensembl chr20:6,413,901...6,425,833 		JBrowse link
G Ush1c USH1 protein network component harmonin located_in IDA
ISO 		(PMID:14578428), (PMID:17906286) RGD PMID:14578428 PMID:17906286 PMID:14578428 RGD:1303964 NCBI chr 1:105,831,719...105,880,082
Ensembl chr 1:105,831,723...105,880,082 		JBrowse link
G Vcan versican located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 2:22,497,035...22,595,955
Ensembl chr 2:22,497,035...22,595,955 		JBrowse link
G Wdr19 WD repeat domain 19 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr14:43,396,130...43,460,012
Ensembl chr14:43,397,835...43,459,939 		JBrowse link
photoreceptor outer segment membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdhr1 cadherin-related family member 1 located_in IEA
ISO 		GO_REF:0000107
(PMID:18654668) 		Ensembl
RGD		 PMID:18654668 GO_REF:0000107 NCBI chr16:12,863,696...12,883,579
Ensembl chr16:12,863,696...12,883,579 		JBrowse link
G Cnga1 cyclic nucleotide gated channel subunit alpha 1 located_in IEA
ISO 		GO_REF:0000107
(PMID:18654668) 		Ensembl
RGD		 PMID:18654668 GO_REF:0000107 NCBI chr14:35,920,948...35,959,065
Ensembl chr14:35,926,854...35,959,056 		JBrowse link
G Gnb1 G protein subunit beta 1 IDA RGD PMID:11931744 RGD:1599009 NCBI chr 5:171,357,778...171,424,489
Ensembl chr 5:171,357,797...171,424,488 		JBrowse link
G Gucy2e guanylate cyclase 2E located_in IEA
ISO
IDA 		GO_REF:0000107
GO_REF:0000117
(PMID:21598940)
PMID:9153227 		Ensembl
UniProt
RGD		 PMID:21598940 PMID:9153227 GO_REF:0000107 GO_REF:0000117, RGD:1599625 NCBI chr10:54,453,753...54,478,639
Ensembl chr10:54,457,844...54,472,898 		JBrowse link
G Pde6a phosphodiesterase 6A is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr18:56,947,249...57,019,015
Ensembl chr18:56,947,249...57,019,015 		JBrowse link
G Pde6b phosphodiesterase 6B is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:1,468,302...1,511,435
Ensembl chr14:1,468,302...1,511,435 		JBrowse link
G Pde6g phosphodiesterase 6G is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:106,219,849...106,224,496
Ensembl chr10:106,219,849...106,224,496 		JBrowse link
G Pde6h phosphodiesterase 6H is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:171,588,896...171,604,142
Ensembl chr 4:171,588,974...171,604,249 		JBrowse link
G Phlpp2 PH domain and leucine rich repeat protein phosphatase 2 IDA RGD PMID:20089132 RGD:5131540 NCBI chr19:54,744,581...54,811,258
Ensembl chr19:54,744,581...54,812,259 		JBrowse link
G Prcd photoreceptor disc component located_in ISO (PMID:27613864)
(PMID:27509380), (PMID:27613864) 		RGD PMID:27509380 PMID:27613864 NCBI chr10:102,386,025...102,406,485
Ensembl chr10:102,385,826...102,390,987 		JBrowse link
G Prom1 prominin 1 located_in ISO
IEA 		(PMID:18654668)
GO_REF:0000107 		RGD
Ensembl		 PMID:18654668 GO_REF:0000107 NCBI chr14:71,202,303...71,307,008
Ensembl chr14:71,202,336...71,307,002 		JBrowse link
G Prph peripherin located_in ISO (PMID:10414956) RGD PMID:10414956 NCBI chr 7:132,096,888...132,101,070
Ensembl chr 7:132,097,285...132,101,068 		JBrowse link
G Rdh11 retinol dehydrogenase 11 NOT|located_in ISO (PMID:15790565) RGD PMID:15790565 NCBI chr 6:103,712,373...103,728,247
Ensembl chr 6:103,712,374...103,729,741 		JBrowse link
G Rho rhodopsin located_in IDA
IEA
ISO
ISS 		GO_REF:0000107
(PMID:19934218)
GO_REF:0000024 		Ensembl
RGD
UniProt		 PMID:19934218 PMID:2209754 GO_REF:0000024 GO_REF:0000107, RGD:6893561 NCBI chr 4:150,653,205...150,658,367
Ensembl chr 4:150,653,205...150,658,367 		JBrowse link
G Rom1 retinal outer segment membrane protein 1 located_in ISO
IEA 		(PMID:18654668)
GO_REF:0000107 		RGD
Ensembl		 PMID:18654668 GO_REF:0000107 NCBI chr 1:215,253,155...215,255,163
Ensembl chr 1:215,253,159...215,255,163 		JBrowse link
photoreceptor proximal connecting cilium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cep290 centrosomal protein 290 located_in ISO (PMID:29899041) RGD PMID:29899041 NCBI chr 7:37,196,765...37,285,955
Ensembl chr 7:37,196,783...37,285,955 		JBrowse link
rod photoreceptor outer segment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp1a4 ATPase Na+/K+ transporting subunit alpha 4 located_in ISO
IEA 		(PMID:26373354)
GO_REF:0000107 		RGD
Ensembl		 PMID:26373354 GO_REF:0000107 NCBI chr13:87,216,139...87,252,155
Ensembl chr13:87,216,139...87,251,724 		JBrowse link
G Cep290 centrosomal protein 290 is_active_in ISO MGI:2144877 (PMID:29899041) RGD PMID:29899041 NCBI chr 7:37,196,765...37,285,955
Ensembl chr 7:37,196,783...37,285,955 		JBrowse link
G Cnga1 cyclic nucleotide gated channel subunit alpha 1 located_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:22802073)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:22802073 GO_REF:0000024 GO_REF:0000107 NCBI chr14:35,920,948...35,959,065
Ensembl chr14:35,926,854...35,959,056 		JBrowse link
G Cngb1 cyclic nucleotide gated channel subunit beta 1 located_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:22802073)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:22802073 GO_REF:0000024 GO_REF:0000107 NCBI chr19:9,732,646...9,798,864
Ensembl chr19:9,732,646...9,797,224 		JBrowse link
G Gucy2f guanylate cyclase 2F located_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:21078983)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:21078983 GO_REF:0000024 GO_REF:0000107 NCBI chr  X:110,507,183...110,605,017
Ensembl chr  X:110,507,183...110,605,017 		JBrowse link
G Rd3 RD3 regulator of GUCY2D located_in ISO
IEA 		(PMID:21078983)
GO_REF:0000107 		RGD
Ensembl		 PMID:21078983 GO_REF:0000107 NCBI chr13:106,060,657...106,097,063
Ensembl chr13:106,084,171...106,093,540 		JBrowse link
G Rgs9bp regulator of G protein signaling 9 binding protein located_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 1:97,386,326...97,387,039
Ensembl chr 1:97,386,326...97,387,039 		JBrowse link
G Rho rhodopsin located_in IEA
ISO 		GO_REF:0000107
(PMID:19332056), (PMID:21444805), (PMID:23178122) 		Ensembl
RGD		 PMID:19332056 PMID:21444805 PMID:23178122 GO_REF:0000107 NCBI chr 4:150,653,205...150,658,367
Ensembl chr 4:150,653,205...150,658,367 		JBrowse link
G Spata7 spermatogenesis associated 7 is_active_in IBA
IEA
ISO 		GO_REF:0000033
GO_REF:0000107
MGI:2384917|MGI:5660490 (PMID:29899041) 		GO_Central
Ensembl
RGD		 PMID:29899041 GO_REF:0000033 GO_REF:0000107 NCBI chr 6:123,609,519...123,655,001
Ensembl chr 6:123,609,535...123,655,001 		JBrowse link
G Tmem237 transmembrane protein 237 located_in ISO (PMID:20375344) RGD PMID:20375344 NCBI chr 9:68,027,481...68,066,731
Ensembl chr 9:68,030,664...68,063,525 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 21544
    cellular anatomical structure 21390
      cell projection 2891
        plasma membrane bounded cell projection 2784
          cilium 1017
            non-motile cilium 183
              9+0 non-motile cilium + 139
              9+2 non-motile cilium + 13
              non-motile cilium membrane 3
paths to the root