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ONTOLOGY REPORT - ANNOTATIONS

Term:spine apparatus
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Accession:GO:0097444 term browser browse the term
Definition:A specialization of the endomembrane system found in some classes of dendritic spines consisting of two or more closely apposed lamellae with interspersed electron dense material. The endomembrane component is continuous with the smooth endoplasmic reticulum.
Synonyms:narrow_synonym: dense material
 xref: NIF_Subcellular:sao725931194


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spine apparatus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aplp2 amyloid beta precursor like protein 2 is_active_in ISO (PMID:28450540) RGD PMID:28450540 NCBI chr 8:29,599,230...29,662,311
Ensembl chr 8:29,599,230...29,661,855 		JBrowse link
G Fmr1 fragile X messenger ribonucleoprotein 1 IDA RGD PMID:9030614 RGD:11041080 NCBI chr  X:147,240,239...147,278,057
Ensembl chr  X:147,240,301...147,278,050 		JBrowse link
G Oprd1 opioid receptor, delta 1 is_active_in IDA PMID:11312309 SynGO PMID:11312309 RGD:13702315 NCBI chr 5:144,306,188...144,340,960
Ensembl chr 5:144,306,188...144,340,960 		JBrowse link
G Oprm1 opioid receptor, mu 1 is_active_in IDA PMID:11312309 SynGO PMID:11312309 RGD:13702315 NCBI chr 1:43,160,057...43,413,409
Ensembl chr 1:43,160,057...43,413,409 		JBrowse link
G Ppfia1 PTPRF interacting protein alpha 1 is_active_in IDA PMID:17419996 SynGO PMID:17419996 RGD:14696670 NCBI chr 1:199,641,277...199,718,371
Ensembl chr 1:199,641,277...199,717,277 		JBrowse link
G Ppp1r9b protein phosphatase 1, regulatory subunit 9B is_active_in IDA PMID:9275233 SynGO PMID:9275233 RGD:625590 NCBI chr10:79,938,055...79,954,085
Ensembl chr10:79,938,066...79,954,083 		JBrowse link
G Synpo synaptopodin is_active_in IDA
IBA		 PMID:10701442
GO_REF:0000033		 GO_Central PMID:10701442 GO_REF:0000033, RGD:13702235 NCBI chr18:54,048,299...54,106,388
Ensembl chr18:54,026,152...54,102,126 		JBrowse link
spine apparatus membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chrna7 cholinergic receptor nicotinic alpha 7 subunit is_active_in IDA PMID:11588172 SynGO PMID:11588172 RGD:13702268 NCBI chr 1:116,711,559...116,837,269
Ensembl chr 1:116,714,711...116,837,240 		JBrowse link
G Clstn1 calsyntenin 1 is_active_in IDA PMID:11161476 SynGO PMID:11161476 RGD:13702439 NCBI chr 5:160,031,235...160,094,585
Ensembl chr 5:160,031,308...160,094,583 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 20833
    cellular anatomical structure 20633
      endomembrane system 4342
        spine apparatus 9
          spine apparatus lumen 0
          spine apparatus membrane 2
Path 2
Term Annotations click to browse term
  cellular_component 20833
    cellular anatomical structure 20633
      cell projection 2659
        plasma membrane bounded cell projection 2567
          neuron projection 1624
            dendritic tree 840
              dendrite 838
                dendritic spine 239
                  spine apparatus 9
                    spine apparatus lumen 0
                    spine apparatus membrane 2
paths to the root