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ONTOLOGY REPORT - ANNOTATIONS

Term:RNA localization to nucleus
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Accession:GO:0090685 term browser browse the term
Definition:A macromolecular localization process in which RNA is transported to and maintained in a location within the nucleus.
Synonyms:exact_synonym: RNA localisation to nucleus


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positive regulation of telomerase RNA localization to Cajal body term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cct2 chaperonin containing TCP1 subunit 2 involved_in ISO
IEA		 (PMID:25467444)
GO_REF:0000107		 RGD
Ensembl		 PMID:25467444 GO_REF:0000107 NCBI chr 7:54,578,654...54,591,428
Ensembl chr 7:52,692,725...52,706,944 		JBrowse link
G Cct3 chaperonin containing TCP1 subunit 3 involved_in ISO (PMID:25467444) BHF-UCL PMID:25467444 NCBI chr 2:176,063,529...176,088,180
Ensembl chr 2:173,765,698...173,790,757 		JBrowse link
G Cct4 chaperonin containing TCP1 subunit 4 involved_in ISO
IEA		 (PMID:25467444)
GO_REF:0000107		 RGD
Ensembl		 PMID:25467444 GO_REF:0000107 NCBI chr14:101,193,057...101,205,935
Ensembl chr14:96,991,859...97,005,267 		JBrowse link
G Cct5 chaperonin containing TCP1 subunit 5 involved_in ISO (PMID:25467444) BHF-UCL PMID:25467444 NCBI chr 2:84,302,621...84,313,773
Ensembl chr 2:82,590,630...82,602,930 		JBrowse link
G Cct6a chaperonin containing TCP1 subunit 6A involved_in ISO (PMID:25467444) BHF-UCL PMID:25467444 NCBI chr12:32,508,842...32,519,072
Ensembl chr12:26,872,574...26,883,337 		JBrowse link
G Cct7 chaperonin containing TCP1 subunit 7 involved_in ISO (PMID:25467444) BHF-UCL PMID:25467444 NCBI chr 4:119,546,730...119,563,973
Ensembl chr 4:117,989,232...118,006,580 		JBrowse link
G Cct8 chaperonin containing TCP1 subunit 8 involved_in ISO (PMID:25467444) BHF-UCL PMID:25467444 NCBI chr11:40,196,619...40,208,328
Ensembl chr11:26,710,370...26,722,079 		JBrowse link
G Dkc1 dyskerin pseudouridine synthase 1 involved_in ISO (PMID:25467444) RGD PMID:25467444 NCBI chr  X:157,751,651...157,757,796 JBrowse link
G Tcp1 t-complex 1 involved_in ISO
IEA		 (PMID:25467444)
GO_REF:0000107		 RGD
Ensembl		 PMID:25467444 GO_REF:0000107 NCBI chr 1:50,376,848...50,384,527
Ensembl chr 1:47,828,652...47,836,839 		JBrowse link
regulation of telomerase RNA localization to Cajal body term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dcp2 decapping mRNA 2 involved_in ISO (PMID:26950371) RGD PMID:26950371 NCBI chr18:37,001,615...37,037,949
Ensembl chr18:36,750,732...36,788,557 		JBrowse link
G Dkc1 dyskerin pseudouridine synthase 1 involved_in ISO (PMID:26950371) RGD PMID:26950371 NCBI chr  X:157,751,651...157,757,796 JBrowse link
G Exosc10 exosome component 10 involved_in ISO
IEA		 (PMID:26950371)
GO_REF:0000107		 RGD
Ensembl		 PMID:26950371 GO_REF:0000107 NCBI chr 5:164,278,414...164,302,067
Ensembl chr 5:158,995,313...159,018,940 		JBrowse link
G Parn poly(A)-specific ribonuclease involved_in ISO
IEA		 (PMID:26950371)
GO_REF:0000107		 RGD
Ensembl		 PMID:26950371 GO_REF:0000107 NCBI chr10:1,917,830...2,055,749
Ensembl chr10:1,410,642...1,548,560 		JBrowse link
scaRNA localization to Cajal body term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cct2 chaperonin containing TCP1 subunit 2 acts_upstream_of_positive_effect ISO
IEA		 (PMID:25467444)
GO_REF:0000107		 RGD
Ensembl		 PMID:25467444 GO_REF:0000107 NCBI chr 7:54,578,654...54,591,428
Ensembl chr 7:52,692,725...52,706,944 		JBrowse link
G Cct4 chaperonin containing TCP1 subunit 4 acts_upstream_of_positive_effect ISO
IEA		 (PMID:25467444)
GO_REF:0000107		 RGD
Ensembl		 PMID:25467444 GO_REF:0000107 NCBI chr14:101,193,057...101,205,935
Ensembl chr14:96,991,859...97,005,267 		JBrowse link
G Dkc1 dyskerin pseudouridine synthase 1 acts_upstream_of_or_within ISO (PMID:25467444) RGD PMID:25467444 NCBI chr  X:157,751,651...157,757,796 JBrowse link
G Tcp1 t-complex 1 acts_upstream_of_positive_effect ISO
IEA		 (PMID:25467444)
GO_REF:0000107		 RGD
Ensembl		 PMID:25467444 GO_REF:0000107 NCBI chr 1:50,376,848...50,384,527
Ensembl chr 1:47,828,652...47,836,839 		JBrowse link
G Wrap53 WD repeat containing, antisense to TP53 involved_in ISO
IEA
ISS		 (PMID:19285445), (PMID:25467444)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:19285445 PMID:25467444 GO_REF:0000024 GO_REF:0000107 NCBI chr10:54,780,873...54,797,919
Ensembl chr10:54,282,105...54,298,929 		JBrowse link
telomerase RNA localization to Cajal body term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Naf1 nuclear assembly factor 1 ribonucleoprotein acts_upstream_of_or_within ISO (PMID:25467444) BHF-UCL PMID:25467444 NCBI chr16:22,837,583...22,868,320
Ensembl chr16:22,837,588...22,868,293 		JBrowse link
G Nhp2 NHP2 ribonucleoprotein acts_upstream_of_or_within ISO (PMID:25467444) BHF-UCL PMID:25467444 NCBI chr10:36,378,020...36,381,362
Ensembl chr10:35,877,054...35,882,545 		JBrowse link
G Nop10 NOP10 ribonucleoprotein acts_upstream_of_or_within ISO (PMID:25467444) BHF-UCL PMID:25467444 NCBI chr 3:99,066,857...99,067,942
Ensembl chr 3:99,066,857...99,067,942 		JBrowse link
G Ruvbl1 RuvB-like AAA ATPase 1 acts_upstream_of_or_within ISO (PMID:25467444) BHF-UCL PMID:25467444 NCBI chr 4:122,489,754...122,524,666
Ensembl chr 4:120,932,417...121,029,384 		JBrowse link
G Ruvbl2 RuvB-like AAA ATPase 2 acts_upstream_of_or_within ISO (PMID:25467444) BHF-UCL PMID:25467444 NCBI chr 1:105,038,487...105,051,851
Ensembl chr 1:95,901,701...95,915,342 		JBrowse link
G Shq1 SHQ1, H/ACA ribonucleoprotein assembly factor acts_upstream_of_or_within ISO (PMID:25467444) BHF-UCL PMID:25467444 NCBI chr 4:133,213,357...133,305,586
Ensembl chr 4:133,213,361...133,305,586 		JBrowse link
G Wrap53 WD repeat containing, antisense to TP53 involved_in ISO
IEA		 (PMID:25467444)
GO_REF:0000107		 RGD
Ensembl		 PMID:25467444 GO_REF:0000107 NCBI chr10:54,780,873...54,797,919
Ensembl chr10:54,282,105...54,298,929 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20567
    localization 5739
      macromolecule localization 3200
        RNA localization 183
          RNA localization to nucleus 19
            RNA localization to Cajal body + 19
paths to the root