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ONTOLOGY REPORT - ANNOTATIONS

Term:RNA polymerase II transcription repressor complex
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Accession:GO:0090571 term browser browse the term
Definition:A protein complex, located in the nucleus, that possesses activity that prevents or downregulates transcription from a RNA polymerase II promoter.


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RNA polymerase II transcription repressor complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bin1 bridging integrator 1 part_of IEA
ISO 		GO_REF:0000107
(PMID:15992821) 		Ensembl
RGD		 PMID:15992821 GO_REF:0000107 NCBI chr18:24,282,840...24,341,461
Ensembl chr18:24,283,801...24,341,458 		JBrowse link
G Ddx20 DEAD-box helicase 20 part_of ISO
IEA 		(PMID:12007404)
GO_REF:0000107 		RGD
Ensembl		 PMID:12007404 GO_REF:0000107 NCBI chr 2:195,847,105...195,859,989
Ensembl chr 2:195,847,105...195,855,461 		JBrowse link
G Etv3 ETS variant transcription factor 3 part_of ISO
IEA 		(PMID:12007404)
GO_REF:0000107 		RGD
Ensembl		 PMID:12007404 GO_REF:0000107 NCBI chr 2:172,965,461...172,980,320
Ensembl chr 2:175,263,459...175,278,208 		JBrowse link
G Foxo3 forkhead box O3 part_of ISO
IEA 		(PMID:18393360)
GO_REF:0000107 		RGD
Ensembl		 PMID:18393360 GO_REF:0000107 NCBI chr20:47,251,968...47,348,254
Ensembl chr20:47,255,878...47,346,845 		JBrowse link
G Hdac2 histone deacetylase 2 part_of ISO (PMID:12007404) RGD PMID:12007404 NCBI chr20:42,101,815...42,126,486
Ensembl chr20:42,102,861...42,126,311 		JBrowse link
G Hdac5 histone deacetylase 5 part_of ISO (PMID:12007404) RGD PMID:12007404 NCBI chr10:87,653,139...87,688,078
Ensembl chr10:87,652,656...87,694,244 		JBrowse link
G Lin54 lin-54 DREAM MuvB core complex component part_of ISO
IEA 		(PMID:27465258)
GO_REF:0000107 		RGD
Ensembl		 PMID:27465258 GO_REF:0000107 NCBI chr14:9,129,775...9,188,244
Ensembl chr14:9,434,112...9,492,106 		JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor part_of ISO (PMID:15992821), (PMID:18393360) RGD PMID:15992821 PMID:18393360 NCBI chr 7:95,483,105...95,488,031
Ensembl chr 7:95,483,105...95,488,028 		JBrowse link
G Tbx15 T-box transcription factor 15 part_of ISO
IEA 		(PMID:17584735)
GO_REF:0000117
GO_REF:0000107 		RGD
UniProt
Ensembl		 PMID:17584735 GO_REF:0000107 GO_REF:0000117 NCBI chr 2:186,576,650...186,687,748
Ensembl chr 2:189,265,373...189,376,466 		JBrowse link
G Tbx18 T-box transcription factor 18 part_of ISO
IEA 		(PMID:17584735)
GO_REF:0000117 		RGD
UniProt		 PMID:17584735 GO_REF:0000117 NCBI chr 8:97,531,960...97,559,988
Ensembl chr 8:97,531,960...97,559,965 		JBrowse link
G Tbx22 T-box transcription factor 22 part_of IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr  X:72,723,619...72,774,647
Ensembl chr  X:76,825,005...76,847,443 		JBrowse link
beta-catenin-ICAT complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnnb1 catenin beta 1 part_of IEA
ISO 		GO_REF:0000107
(PMID:10898789) 		Ensembl
RGD		 PMID:10898789 GO_REF:0000107 NCBI chr 8:129,517,576...129,544,661
Ensembl chr 8:129,517,545...129,544,662 		JBrowse link
G Ctnnbip1 catenin, beta-interacting protein 1 part_of ISO
IEA 		(PMID:10898789)
GO_REF:0000107 		RGD
Ensembl		 PMID:10898789 GO_REF:0000107 NCBI chr 5:165,245,019...165,293,994
Ensembl chr 5:165,245,098...165,293,991 		JBrowse link
DRM complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lin52 lin-52 DREAM MuvB core complex component part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 6:109,829,896...109,927,122
Ensembl chr 6:109,830,131...109,925,310 		JBrowse link
Mad-Max complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Max MYC associated factor X part_of ISO (PMID:12553908) RGD PMID:12553908 NCBI chr 6:101,369,989...101,395,333
Ensembl chr 6:101,369,988...101,395,549 		JBrowse link
G Mxd1 max dimerization protein 1 part_of ISO
IEA 		(PMID:12553908)
GO_REF:0000107 		RGD
Ensembl		 PMID:12553908 GO_REF:0000107 NCBI chr 4:120,654,731...120,678,972
Ensembl chr 4:120,654,731...120,675,129 		JBrowse link
negative cofactor 2 complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dr1 down-regulator of transcription 1 part_of IEA
IBA 		GO_REF:0000002
GO_REF:0000033 		InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr14:1,603,203...1,614,556
Ensembl chr14:1,603,204...1,614,556 		JBrowse link
G Drap1 Dr1 associated protein 1 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:212,161,107...212,163,833
Ensembl chr 1:212,161,125...212,163,762 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 21544
    protein-containing complex 6918
      nuclear protein-containing complex 1363
        RNA polymerase II transcription repressor complex 18
          Cyc8(Ssn6)-Tup1 general repressor complex 0
          DRM complex 1
          Mad-Max complex 2
          Mad-Max-mSin3A complex 0
          Mad-Max-mSin3B complex 0
          Tle3-Aes complex 0
          beta-catenin-ICAT complex 2
          negative cofactor 2 complex 2
Path 2
Term Annotations click to browse term
  cellular_component 21544
    cellular anatomical structure 21390
      intracellular anatomical structure 15814
        intracellular organelle 14062
          intracellular membrane-bounded organelle 12498
            nucleus 7903
              nuclear protein-containing complex 1363
                RNA polymerase II transcription repressor complex 18
                  Cyc8(Ssn6)-Tup1 general repressor complex 0
                  DRM complex 1
                  Mad-Max complex 2
                  Mad-Max-mSin3A complex 0
                  Mad-Max-mSin3B complex 0
                  Tle3-Aes complex 0
                  beta-catenin-ICAT complex 2
                  negative cofactor 2 complex 2
paths to the root