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ONTOLOGY REPORT - ANNOTATIONS

Term:positive regulation of wound healing
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Accession:GO:0090303 term browser browse the term
Definition:Any process that increases the rate, frequency, or extent of the series of events that restore integrity to a damaged tissue, following an injury.

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positive regulation of wound healing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actg1 actin gamma 1 involved_in ISO (PMID:25705373) ARUK-UCL PMID:25705373 NCBI chrNW_004936594:5,170,711...5,173,251
Ensembl chrNW_004936594:5,170,711...5,173,247 		JBrowse link
G Adra2a adrenoceptor alpha 2A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936486:1,837,785...1,841,019
Ensembl chrNW_004936486:1,838,176...1,839,630 		JBrowse link
G Anxa1 annexin A1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936503:9,124,314...9,142,372
Ensembl chrNW_004936503:9,124,264...9,142,413 		JBrowse link
G Arfgef1 ARF guanine nucleotide exchange factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936496:6,807,388...6,914,960
Ensembl chrNW_004936496:6,807,403...6,914,987 		JBrowse link
G Arhgef2 Rho/Rac guanine nucleotide exchange factor 2 involved_in ISO (PMID:23389627) AgBase PMID:23389627 NCBI chrNW_004936580:5,213,323...5,230,861
Ensembl chrNW_004936580:5,214,401...5,245,021 		JBrowse link
G Ccn4 cellular communication network factor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:16,110,492...16,134,065
Ensembl chrNW_004936470:16,110,497...16,134,065 		JBrowse link
G Cldn1 claudin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936578:98,489...113,125
Ensembl chrNW_004936578:98,273...113,153 		JBrowse link
G Cldn3 claudin 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936543:2,952,054...2,953,313
Ensembl chrNW_004936543:2,951,086...2,953,956 		JBrowse link
G Cldn4 claudin 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936543:2,984,797...2,986,563
Ensembl chrNW_004936543:2,984,996...2,985,625 		JBrowse link
G Clec7a C-type lectin domain containing 7A involved_in ISO (PMID:24721111) ARUK-UCL PMID:24721111 NCBI chrNW_004936902:436,224...446,435 JBrowse link
G Ddr2 discoidin domain receptor tyrosine kinase 2 ISO RGD PMID:26674152 RGD:11554781 NCBI chrNW_004936831:799,948...946,139
Ensembl chrNW_004936831:865,965...946,139 		JBrowse link
G Dmtn dematin actin binding protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936555:5,884,746...5,911,171
Ensembl chrNW_004936555:5,896,471...5,910,098 		JBrowse link
G Duox1 dual oxidase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:7,848,472...7,881,417
Ensembl chrNW_004936471:7,848,472...7,879,390 		JBrowse link
G Duox2 dual oxidase 2 involved_in ISO (PMID:19339556) UniProt PMID:19339556 NCBI chrNW_004936471:7,812,163...7,831,258
Ensembl chrNW_004936471:7,813,128...7,831,258 		JBrowse link
G Hbegf heparin binding EGF like growth factor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936531:9,332,939...9,345,039
Ensembl chrNW_004936531:9,332,898...9,345,067 		JBrowse link
G Hmgb1 high mobility group box 1 involved_in ISO (PMID:16365390) UniProt PMID:16365390 NCBI chrNW_004936472:25,236,728...25,246,585
Ensembl chrNW_004936472:25,236,728...25,246,580 		JBrowse link
G Hras HRas proto-oncogene, GTPase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936888:375,372...378,125
Ensembl chrNW_004936888:375,377...377,958 		JBrowse link
G Itgb1 integrin subunit beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936574:1,465,981...1,495,717
Ensembl chrNW_004936574:1,465,897...1,495,762 		JBrowse link
G Kank1 KN motif and ankyrin repeat domains 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936503:4,125,302...4,255,880
Ensembl chrNW_004936503:4,122,204...4,246,680 		JBrowse link
G Mylk myosin light chain kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936725:1,418,930...1,594,697
Ensembl chrNW_004936725:1,424,130...1,592,840 		JBrowse link
G Ocln occludin involved_in ISO (PMID:20152177) ARUK-UCL PMID:20152177 NCBI chrNW_004936480:99,516...152,834
Ensembl chrNW_004936480:98,371...152,413 		JBrowse link
G Plcg1 phospholipase C gamma 1 ISO RGD PMID:20537760 RGD:597621556 NCBI chrNW_004936561:598,372...631,575
Ensembl chrNW_004936561:598,382...631,581 		JBrowse link
G Prkce protein kinase C epsilon involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936508:6,018,374...6,495,216
Ensembl chrNW_004936508:6,017,551...6,494,427 		JBrowse link
G Ptger4 prostaglandin E receptor 4 ISO RGD PMID:16515909 RGD:10043388 NCBI chrNW_004936518:1,903,636...1,916,746
Ensembl chrNW_004936518:1,903,725...1,916,746 		JBrowse link
G Ptk2 protein tyrosine kinase 2 involved_in ISO (PMID:26763945) ARUK-UCL PMID:26763945 NCBI chrNW_004936470:10,379,855...10,578,531
Ensembl chrNW_004936470:10,379,872...10,578,543 		JBrowse link
G Reg3g regenerating family member 3 gamma involved_in ISO (PMID:22727489) UniProt PMID:22727489 NCBI chrNW_004936556:4,896,141...4,898,240 JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase ISO RGD PMID:20537760 RGD:597621556 NCBI chrNW_004936561:3,826,802...3,844,406
Ensembl chrNW_004936561:3,825,787...3,844,483 		JBrowse link
G Tmem97 transmembrane protein 97 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936538:4,475,314...4,484,385
Ensembl chrNW_004936538:4,475,256...4,484,643 		JBrowse link
activation of blood coagulation via clotting cascade term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ano6 anoctamin 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936512:3,649,103...3,736,274
Ensembl chrNW_004936512:3,540,129...3,732,776 		JBrowse link
G F3 coagulation factor III, tissue factor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936537:4,637,028...4,647,915
Ensembl chrNW_004936537:4,636,667...4,647,916 		JBrowse link
G Vwf von Willebrand factor acts_upstream_of_or_within ISO (PMID:30573509) MGI PMID:30573509 NCBI chrNW_004936709:1,578,137...1,741,877
Ensembl chrNW_004936709:1,579,096...1,741,754 		JBrowse link
negative regulation of fibrinolysis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoh apolipoprotein H involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936541:6,683,483...6,695,094
Ensembl chrNW_004936541:6,683,534...6,695,066 		JBrowse link
G Cpb2 carboxypeptidase B2 ISO RGD PMID:17002650 RGD:2313647 NCBI chrNW_004936857:577,067...609,855
Ensembl chrNW_004936857:577,585...626,267 		JBrowse link
G Hrg histidine rich glycoprotein involved_in
acts_upstream_of_or_within 		IEA
ISO 		(PMID:15869579) TreeGrafter
MGI		 PMID:15869579 GO_REF:0000118 NCBI chrNW_004936578:3,285,986...3,295,876
Ensembl chrNW_004936578:3,285,986...3,295,876 		JBrowse link
G Plg plasminogen involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936489:11,775,243...11,808,482
Ensembl chrNW_004936489:11,775,243...11,805,651 		JBrowse link
G Serpine1 serpin family E member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936543:1,032,543...1,040,956
Ensembl chrNW_004936543:1,032,794...1,039,123 		JBrowse link
G Serpinf2 serpin family F member 2 involved_in ISO
IEA 		RGD
Ensembl		 PMID:6506034 GO_REF:0000107 RGD:1625541 NCBI chrNW_004936538:7,870,898...7,877,279
Ensembl chrNW_004936538:7,870,898...7,877,219 		JBrowse link
G Thbs1 thrombospondin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:3,064,466...3,081,125
Ensembl chrNW_004936471:3,064,422...3,081,949 		JBrowse link
phosphatidylserine exposure on blood platelet term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ano6 anoctamin 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936512:3,649,103...3,736,274
Ensembl chrNW_004936512:3,540,129...3,732,776 		JBrowse link
positive regulation of blood coagulation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd36 CD36 molecule (CD36 blood group) involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936810:791,823...838,303
Ensembl chrNW_004936810:758,182...838,365 		JBrowse link
G Emilin2 elastin microfibril interfacer 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936672:1,607,914...1,661,531
Ensembl chrNW_004936672:1,609,193...1,661,528 		JBrowse link
G Enpp4 ectonucleotide pyrophosphatase/phosphodiesterase 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:14,188,328...14,204,063
Ensembl chrNW_004936476:14,191,479...14,195,618 		JBrowse link
G F12 coagulation factor XII involved_in ISO (PMID:6793628) BHF-UCL PMID:6793628 NCBI chrNW_004936597:1,687,511...1,694,782 JBrowse link
G F2 coagulation factor II, thrombin involved_in ISO
IEA 		RGD
TreeGrafter
Ensembl		 PMID:20664909 GO_REF:0000107 GO_REF:0000118 RGD:10449431 NCBI chrNW_004936562:2,371,725...2,388,617
Ensembl chrNW_004936562:2,372,044...2,388,650 		JBrowse link
G F2r coagulation factor II thrombin receptor involved_in
acts_upstream_of_or_within 		IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936549:226,508...247,024
Ensembl chrNW_004936549:225,371...247,042 		JBrowse link
G F7 coagulation factor VII ISO RGD PMID:12757778 RGD:2312295 NCBI chrNW_004936472:505,751...515,375
Ensembl chrNW_004936472:505,751...514,339 		JBrowse link
G Hpse heparanase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936738:1,308,350...1,341,421
Ensembl chrNW_004936738:1,308,345...1,343,145 		JBrowse link
G Nfe2l2 NFE2 like bZIP transcription factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936509:6,589,967...6,621,171
Ensembl chrNW_004936509:6,590,630...6,620,262 		JBrowse link
G Prdx2 peroxiredoxin 2 involved_in ISO (PMID:20978343) BHF-UCL PMID:20978343 NCBI chrNW_004936659:1,894,423...1,897,690 JBrowse link
G S100a9 S100 calcium binding protein A9 involved_in ISO (PMID:24691441) CACAO PMID:24691441 NCBI chrNW_004936580:3,228,097...3,230,652
Ensembl chrNW_004936580:3,228,092...3,230,676 		JBrowse link
G Serpine1 serpin family E member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936543:1,032,543...1,040,956
Ensembl chrNW_004936543:1,032,794...1,039,123 		JBrowse link
G St3gal4 ST3 beta-galactoside alpha-2,3-sialyltransferase 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936572:5,806,897...5,851,557
Ensembl chrNW_004936572:5,806,894...5,841,550 		JBrowse link
G Tbxa2r thromboxane A2 receptor ISO RGD PMID:7848332 RGD:11059887 NCBI chrNW_004936588:2,040,712...2,044,635
Ensembl chrNW_004936588:2,040,630...2,045,110 		JBrowse link
G Thbs1 thrombospondin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:3,064,466...3,081,125
Ensembl chrNW_004936471:3,064,422...3,081,949 		JBrowse link
positive regulation of vascular wound healing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cxcr4 C-X-C motif chemokine receptor 4 ISO RGD PMID:24955809 RGD:11352686 NCBI chrNW_004936469:39,794,613...39,798,448
Ensembl chrNW_004936469:39,794,584...39,798,459 		JBrowse link
G Foxc2 forkhead box C2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936641:2,236,224...2,238,501
Ensembl chrNW_004936641:2,236,873...2,238,375 		JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha ISO RGD PMID:30052311 RGD:155663378 NCBI chrNW_004936495:5,770,988...5,816,157
Ensembl chrNW_004936495:5,770,669...5,816,157 		JBrowse link
G Smoc2 SPARC related modular calcium binding 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936489:17,454,274...17,594,894
Ensembl chrNW_004936489:17,454,270...17,594,901 		JBrowse link
G Vegfb vascular endothelial growth factor B involved_in ISO (PMID:16109918) UniProt PMID:16109918 NCBI chrNW_004936599:4,963,161...4,966,258
Ensembl chrNW_004936599:4,962,222...4,966,264 		JBrowse link
G Xbp1 X-box binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936657:2,891,171...2,895,409
Ensembl chrNW_004936657:2,891,907...2,896,174 		JBrowse link
positive regulation of wound healing, spreading of epidermal cells term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fermt1 FERM domain containing kindlin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936485:12,985,552...13,016,997
Ensembl chrNW_004936485:12,985,552...13,016,906 		JBrowse link
G Fermt2 FERM domain containing kindlin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936697:1,927,817...2,008,268
Ensembl chrNW_004936697:1,927,812...2,008,268 		JBrowse link
G Mtor mechanistic target of rapamycin kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:158,376...282,310
Ensembl chrNW_004936474:157,590...282,342 		JBrowse link
G Rreb1 ras responsive element binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936534:5,321,488...5,390,612
Ensembl chrNW_004936534:5,324,430...5,385,707 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17413
    response to stimulus 8649
      positive regulation of response to stimulus 2338
        positive regulation of response to wounding 80
          positive regulation of wound healing 61
            positive regulation of blood coagulation + 23
            positive regulation of vascular wound healing 6
            positive regulation of wound healing, spreading of epidermal cells 4
Path 2
Term Annotations click to browse term
  biological_process 17413
    biological regulation 11398
      regulation of biological process 11034
        regulation of response to stimulus 3859
          regulation of response to stress 1336
            regulation of response to wounding 175
              positive regulation of response to wounding 80
                positive regulation of wound healing 61
                  positive regulation of blood coagulation + 23
                  positive regulation of vascular wound healing 6
                  positive regulation of wound healing, spreading of epidermal cells 4
paths to the root