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ONTOLOGY REPORT - ANNOTATIONS

Term:positive regulation of wound healing
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Accession:GO:0090303 term browser browse the term
Definition:Any process that increases the rate, frequency, or extent of the series of events that restore integrity to a damaged tissue, following an injury.


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positive regulation of wound healing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTG1 actin gamma 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:1,320,355...1,323,219
Ensembl chr12:1,313,641...1,323,217 		JBrowse link
G ADRA2A adrenoceptor alpha 2A involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:121,469,572...121,470,924
Ensembl chr14:121,469,527...121,470,924 		JBrowse link
G ANXA1 annexin A1 involved_in ISS
IEA 		UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:226,414,200...226,431,963
Ensembl chr 1:226,414,306...226,432,279 		JBrowse link
G ARFGEF1 ADP ribosylation factor guanine nucleotide exchange factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:67,465,517...67,613,611
Ensembl chr 4:67,465,529...67,613,611 		JBrowse link
G ARHGEF2 Rho/Rac guanine nucleotide exchange factor 2 involved_in IMP (PMID:23389627) AgBase PMID:23389627 NCBI chr 4:94,026,391...94,082,206
Ensembl chr 4:94,026,386...94,080,420 		JBrowse link
G CCL2 chemokine (C-C motif) ligand 2 ISO RGD PMID:12831234 RGD:11526146 NCBI chr12:40,798,109...40,800,013
Ensembl chr12:40,798,109...40,800,026 		JBrowse link
G CCN4 cellular communication network factor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:8,078,163...8,110,906
Ensembl chr 4:8,079,755...8,110,700 		JBrowse link
G CLDN1 claudin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:127,714,857...127,730,628
Ensembl chr13:127,712,777...127,730,657 		JBrowse link
G CLDN3 claudin 3 involved_in ISO (PMID:16103090) ARUK-UCL PMID:16103090 NCBI chr 3:11,019,073...11,020,102
Ensembl chr 3:11,019,073...11,020,102 		JBrowse link
G CLDN4 claudin 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:11,039,711...11,053,930
Ensembl chr 3:11,039,706...11,053,925 		JBrowse link
G CLEC7A C-type lectin domain containing 7A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:61,832,910...61,846,441
Ensembl chr 5:61,832,954...61,846,434 		JBrowse link
G DDR2 discoidin domain receptor tyrosine kinase 2 ISO RGD PMID:26674152 RGD:11554781 NCBI chr 4:87,749,738...87,911,818
Ensembl chr 4:87,756,168...87,911,296 		JBrowse link
G DMTN dematin actin binding protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:6,315,643...6,346,722
Ensembl chr14:6,321,870...6,346,865 		JBrowse link
G DUOX1 dual oxidase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:126,572,533...126,603,084
Ensembl chr 1:126,572,492...126,603,082 		JBrowse link
G DUOX2 dual oxidase 2 involved_in ISO (PMID:19339556) UniProt PMID:19339556 NCBI chr 1:126,620,468...126,641,406
Ensembl chr 1:126,620,510...126,641,406 		JBrowse link
G HBEGF heparin binding EGF like growth factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:142,102,455...142,115,192
Ensembl chr 2:142,102,458...142,115,174 		JBrowse link
G HMGB1 high mobility group box 1 involved_in ISO (PMID:16365390) UniProt PMID:16365390 NCBI chr11:7,195,556...7,321,071 JBrowse link
G HRAS HRas proto-oncogene, GTPase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:299,662...302,539
Ensembl chr 2:299,660...302,501 		JBrowse link
G INSL3 insulin like 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:59,929,591...59,931,220
Ensembl chr 2:59,929,584...59,931,219 		JBrowse link
G ITGB1 integrin subunit beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:56,078,393...56,130,608
Ensembl chr10:56,078,396...56,173,326 		JBrowse link
G KANK1 KN motif and ankyrin repeat domains 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:221,015,042...221,218,875
Ensembl chr 1:221,015,046...221,078,245 		JBrowse link
G LOC396566 claudin 1-like involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:93,939,938...94,073,596 JBrowse link
G MIR21 microRNA mir-21 ISO RGD PMID:27798620 RGD:41404703 NCBI chr12:36,065,267...36,065,358
Ensembl chr12:36,065,267...36,065,358 		JBrowse link
G MIR29A microRNA mir-29a involved_in ISO (PMID:25058496) FlyBase PMID:25058496 NCBI chr18:18,040,032...18,040,117
Ensembl chr18:18,040,032...18,040,118 		JBrowse link
G MYLK myosin light chain kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:136,509,878...136,809,674
Ensembl chr13:136,509,755...136,809,668 		JBrowse link
G OCLN occludin involved_in ISO (PMID:20152177) ARUK-UCL PMID:20152177 NCBI chr16:47,600,175...47,652,435
Ensembl chr16:47,600,212...47,654,033 		JBrowse link
G PLCG1 phospholipase C gamma 1 ISO RGD PMID:20537760 RGD:597621556 NCBI chr17:43,810,003...43,844,553
Ensembl chr17:43,810,048...43,844,554 		JBrowse link
G PRKCE protein kinase C epsilon involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:94,351,277...94,864,549
Ensembl chr 3:94,349,889...94,866,306 		JBrowse link
G PTGER4 prostaglandin E receptor 4 ISO RGD PMID:16515909 RGD:10043388 NCBI chr16:25,670,832...25,686,556
Ensembl chr16:25,670,862...25,686,552 		JBrowse link
G PTK2 protein tyrosine kinase 2 involved_in ISO (PMID:26763945) ARUK-UCL PMID:26763945 NCBI chr 4:2,656,606...2,896,060
Ensembl chr 4:2,656,614...2,896,054 		JBrowse link
G SRC SRC proto-oncogene, non-receptor tyrosine kinase ISO RGD PMID:20537760 RGD:597621556 NCBI chr17:40,470,970...40,524,862
Ensembl chr17:40,471,009...40,524,860 		JBrowse link
G TMEM97 transmembrane protein 97 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:44,603,764...44,609,935
Ensembl chr12:44,604,021...44,609,999 		JBrowse link
activation of blood coagulation via clotting cascade term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANO6 anoctamin 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:76,112,428...76,337,073
Ensembl chr 5:76,113,212...76,356,544 		JBrowse link
G F3 coagulation factor III, tissue factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:122,827,018...122,837,673
Ensembl chr 4:122,826,644...122,837,666 		JBrowse link
G VWF von Willebrand factor acts_upstream_of_or_within ISO (PMID:30573509) MGI PMID:30573509 NCBI chr 5:64,516,627...64,655,938
Ensembl chr 5:64,517,555...64,655,938 		JBrowse link
negative regulation of fibrinolysis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOH apolipoprotein H involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:12,827,195...12,839,172
Ensembl chr12:12,827,201...12,839,175 		JBrowse link
G CPB2 carboxypeptidase B2 ISO RGD PMID:17002650 RGD:2313647 NCBI chr11:21,234,447...21,298,250
Ensembl chr11:21,234,447...21,298,241 		JBrowse link
G HRG histidine rich glycoprotein involved_in
acts_upstream_of_or_within 		IBA
ISO 		(PMID:15869579) GO_Central
MGI		 PMID:15869579 GO_REF:0000033 NCBI chr13:124,505,305...124,516,387
Ensembl chr13:124,505,312...124,516,705 		JBrowse link
G PLG plasminogen involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:7,062,399...7,109,521
Ensembl chr 1:7,061,192...7,110,555 		JBrowse link
G SERPINE1 serpin family E member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:8,863,738...8,871,572
Ensembl chr 3:8,863,695...8,871,547 		JBrowse link
G SERPINF2 serpin family F member 2 involved_in ISO
IEA 		RGD
Ensembl
InterPro		 PMID:6506034 GO_REF:0000002 GO_REF:0000107 RGD:1625541 NCBI chr12:47,934,551...47,942,283
Ensembl chr12:47,933,864...47,942,285 		JBrowse link
G THBS1 thrombospondin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:131,728,781...131,746,098
Ensembl chr 1:131,728,784...131,746,115 		JBrowse link
phosphatidylserine exposure on blood platelet term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANO6 anoctamin 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:76,112,428...76,337,073
Ensembl chr 5:76,113,212...76,356,544 		JBrowse link
positive regulation of blood coagulation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD36 CD36 molecule involved_in ISO (PMID:20978343) BHF-UCL PMID:20978343 NCBI chr 9:99,685,748...99,782,296
Ensembl chr 9:99,605,181...99,782,105 		JBrowse link
G EMILIN2 elastin microfibril interfacer 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:103,730,618...103,786,921
Ensembl chr 6:103,730,626...103,786,927 		JBrowse link
G ENPP4 ectonucleotide pyrophosphatase/phosphodiesterase 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:40,896,392...40,913,609
Ensembl chr 7:40,896,470...40,912,426 		JBrowse link
G F12 coagulation factor XII involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:80,527,451...80,544,835
Ensembl chr 2:80,527,446...80,544,828 		JBrowse link
G F2 coagulation factor II, thrombin involved_in ISO
IBA
IEA 		RGD
GO_Central
Ensembl		 PMID:20664909 GO_REF:0000033 GO_REF:0000107 RGD:10449431 NCBI chr 2:15,793,257...15,819,151
Ensembl chr 2:15,791,455...15,819,137 		JBrowse link
G F2R coagulation factor II thrombin receptor involved_in
acts_upstream_of_or_within 		ISS
IEA
IBA 		UniProt
Ensembl
GO_Central		 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:85,642,794...85,659,133
Ensembl chr 2:85,641,474...85,656,636 		JBrowse link
G F7 coagulation factor VII ISO RGD PMID:12757778 RGD:2312295 NCBI chr11:78,512,389...78,518,668
Ensembl chr11:78,512,137...78,518,668 		JBrowse link
G HPSE heparanase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:135,082,199...135,120,887
Ensembl chr 8:135,097,725...135,120,887 		JBrowse link
G NFE2L2 NFE2 like bZIP transcription factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:82,967,485...83,146,185
Ensembl chr15:82,973,656...83,146,183 		JBrowse link
G PRDX2 peroxiredoxin 2 involved_in ISO (PMID:20978343) BHF-UCL PMID:20978343 NCBI chr 2:66,207,829...66,211,474
Ensembl chr 2:66,207,828...66,212,009 		JBrowse link
G S100A9 S100 calcium binding protein A9 involved_in ISO (PMID:24691441) CACAO PMID:24691441 NCBI chr 4:96,236,114...96,238,989 JBrowse link
G SERPINE1 serpin family E member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:8,863,738...8,871,572
Ensembl chr 3:8,863,695...8,871,547 		JBrowse link
G ST3GAL4 ST3 beta-galactoside alpha-2,3-sialyltransferase 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:53,442,795...53,491,847
Ensembl chr 9:53,445,591...53,486,010 		JBrowse link
G TBXA2R thromboxane A2 receptor ISO RGD PMID:7848332 RGD:11059887 NCBI chr 2:75,068,413...75,081,305
Ensembl chr 2:75,068,698...75,087,731 		JBrowse link
G THBS1 thrombospondin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:131,728,781...131,746,098
Ensembl chr 1:131,728,784...131,746,115 		JBrowse link
positive regulation of vascular wound healing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CXCR4 C-X-C motif chemokine receptor 4 ISO RGD PMID:24955809 RGD:11352686 NCBI chr15:15,663,652...15,666,706
Ensembl chr15:15,663,494...15,667,232 		JBrowse link
G FOXC2 forkhead box C2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:2,552,141...2,555,041
Ensembl chr 6:2,552,862...2,554,367 		JBrowse link
G HIF1A hypoxia inducible factor 1 subunit alpha ISO RGD PMID:30052311 RGD:155663378 NCBI chr 1:190,625,436...190,673,926
Ensembl chr 1:190,625,244...190,674,845 		JBrowse link
G MIR451 microRNA mir-451 involved_in ISO (PMID:25006399) BHF-UCL PMID:25006399 NCBI chr12:45,088,808...45,088,872
Ensembl chr12:45,088,808...45,088,872 		JBrowse link
G SMOC2 SPARC related modular calcium binding 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:1,193,163...1,332,739
Ensembl chr 1:1,193,167...1,332,694 		JBrowse link
G VEGFB vascular endothelial growth factor B involved_in ISO (PMID:16109918) UniProt PMID:16109918 NCBI chr 2:7,872,873...7,876,149
Ensembl chr 2:7,872,870...7,876,118 		JBrowse link
G XBP1 X-box binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:46,011,239...46,016,526
Ensembl chr14:46,008,377...46,016,526 		JBrowse link
positive regulation of wound healing, spreading of epidermal cells term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FERMT1 FERM domain containing kindlin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:15,080,585...15,137,947
Ensembl chr17:15,080,587...15,137,753 		JBrowse link
G FERMT2 FERM domain containing kindlin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:182,519,681...182,606,890
Ensembl chr 1:182,519,684...182,606,869 		JBrowse link
G MIR221 microRNA mir-221 involved_in ISO (PMID:24269686) BHF-UCL PMID:24269686 NCBI chr  X:40,571,068...40,571,137
Ensembl chr  X:40,571,068...40,571,137 		JBrowse link
G MTOR mechanistic target of rapamycin kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:71,286,989...71,412,913
Ensembl chr 6:71,286,989...71,412,888 		JBrowse link
G RREB1 ras responsive element binding protein 1 involved_in ISO (PMID:18394891) UniProt PMID:18394891 NCBI chr 7:4,512,286...4,639,961 JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18944
    response to stimulus 10146
      positive regulation of response to stimulus 2445
        positive regulation of response to wounding 86
          positive regulation of wound healing 67
            positive regulation of blood coagulation + 23
            positive regulation of vascular wound healing 7
            positive regulation of wound healing, spreading of epidermal cells 5
Path 2
Term Annotations click to browse term
  biological_process 18944
    biological regulation 13005
      regulation of biological process 12624
        regulation of response to stimulus 4124
          regulation of response to stress 1415
            regulation of response to wounding 181
              positive regulation of response to wounding 86
                positive regulation of wound healing 67
                  positive regulation of blood coagulation + 23
                  positive regulation of vascular wound healing 7
                  positive regulation of wound healing, spreading of epidermal cells 5
paths to the root