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Pathways

ONTOLOGY REPORT - ANNOTATIONS


Term:cell-cell signaling involved in cardiac conduction
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Accession:GO:0086019 term browser browse the term
Definition:Any process that mediates the transfer of information from one cell to another and contributes to the heart process that regulates cardiac muscle contraction; beginning with the generation of an action potential in the sinoatrial node and ending with regulation of contraction of the myocardium.
Synonyms:exact_synonym: cell-cell signalling involved in cardiac conduction



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atrial cardiac muscle cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ank2 ankyrin 2 involved_in ISO
IEA
(PMID:17242276), (PMID:18832177), (PMID:21859974)
GO_REF:0000107
(PMID:21859974)
RGD
Ensembl
PMID:17242276 PMID:18832177 PMID:21859974 GO_REF:0000107 NCBI chr 2:218,052,555...218,628,414
Ensembl chr 2:218,052,555...218,537,259
JBrowse link
G Kcna5 potassium voltage-gated channel subfamily A member 5 involved_in IEA
ISO
GO_REF:0000107
(PMID:18281375), (PMID:19343045), (PMID:23264583)
Ensembl
RGD
PMID:18281375 PMID:19343045 PMID:23264583 GO_REF:0000107 NCBI chr 4:161,040,853...161,044,311
Ensembl chr 4:160,996,950...161,044,408
JBrowse link
G Kcne5 potassium voltage-gated channel subfamily E regulatory subunit 5 involved_in ISO
IEA
(PMID:18313602)
GO_REF:0000107
RGD
Ensembl
PMID:18313602 GO_REF:0000107 NCBI chr  X:110,727,234...110,727,849
Ensembl chr  X:110,726,282...110,728,047
JBrowse link
G Kcnq1 potassium voltage-gated channel subfamily Q member 1 involved_in ISO
IEA
(PMID:12522251)
GO_REF:0000107
RGD
Ensembl
PMID:12522251 GO_REF:0000107 NCBI chr 1:207,721,134...208,054,073
Ensembl chr 1:207,721,131...208,054,072
JBrowse link
G Nup155 nucleoporin 155 acts_upstream_of_or_within ISO
IEA
MGI:3840086 (PMID:19070573)
GO_REF:0000107
RGD
Ensembl
PMID:19070573 GO_REF:0000107 NCBI chr 2:58,927,171...58,980,162
Ensembl chr 2:58,928,537...58,981,242
JBrowse link
G Scn3b sodium voltage-gated channel beta subunit 3 involved_in ISO
IEA
(PMID:21051419)
GO_REF:0000107
RGD
Ensembl
PMID:21051419 GO_REF:0000107 NCBI chr 8:49,527,529...49,550,019
Ensembl chr 8:49,527,577...49,550,018
JBrowse link
G Scn5a sodium voltage-gated channel alpha subunit 5 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:18065446)
BHF-UCL
Ensembl
RGD
PMID:18065446 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:128,098,613...128,196,515
Ensembl chr 8:128,098,613...128,196,470
JBrowse link
AV node cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1g calcium voltage-gated channel subunit alpha1 G involved_in ISS GO_REF:0000024 BHF-UCL GO_REF:0000024 NCBI chr10:79,851,886...79,919,926
Ensembl chr10:79,851,896...79,919,634
JBrowse link
G Scn10a sodium voltage-gated channel alpha subunit 10 involved_in ISO
IEA
(PMID:24998131)
GO_REF:0000107
RGD
Ensembl
PMID:24998131 GO_REF:0000107 NCBI chr 8:128,228,424...128,340,749
Ensembl chr 8:128,228,424...128,340,298
JBrowse link
G Scn4b sodium voltage-gated channel beta subunit 4 involved_in ISO (PMID:17592081) RGD PMID:17592081 NCBI chr 8:54,343,873...54,359,046
Ensembl chr 8:54,334,548...54,359,047
JBrowse link
G Scn5a sodium voltage-gated channel alpha subunit 5 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:18616619)
BHF-UCL
Ensembl
RGD
PMID:18616619 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:128,098,613...128,196,515
Ensembl chr 8:128,098,613...128,196,470
JBrowse link
AV node cell to bundle of His cell signaling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1g calcium voltage-gated channel subunit alpha1 G involved_in ISS GO_REF:0000024 BHF-UCL GO_REF:0000024 NCBI chr10:79,851,886...79,919,926
Ensembl chr10:79,851,896...79,919,634
JBrowse link
bundle of His cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Scn10a sodium voltage-gated channel alpha subunit 10 involved_in ISO
IEA
(PMID:24998131)
GO_REF:0000107
RGD
Ensembl
PMID:24998131 GO_REF:0000107 NCBI chr 8:128,228,424...128,340,749
Ensembl chr 8:128,228,424...128,340,298
JBrowse link
G Scn5a sodium voltage-gated channel alpha subunit 5 involved_in ISO
IEA
ISS
(PMID:18065446)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
BHF-UCL
PMID:18065446 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:128,098,613...128,196,515
Ensembl chr 8:128,098,613...128,196,470
JBrowse link
membrane depolarization during atrial cardiac muscle cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1c calcium voltage-gated channel subunit alpha1 C involved_in ISO
ISS
(PMID:17224476)
GO_REF:0000024
RGD
BHF-UCL
PMID:17224476 GO_REF:0000024 NCBI chr 4:153,431,169...154,051,932
Ensembl chr 4:153,436,427...154,051,762
JBrowse link
G Cacnb2 calcium voltage-gated channel auxiliary subunit beta 2 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:17224476)
BHF-UCL
Ensembl
RGD
PMID:17224476 GO_REF:0000024 GO_REF:0000107 NCBI chr17:82,473,097...82,818,564
Ensembl chr17:82,473,129...82,818,564
JBrowse link
G Scn5a sodium voltage-gated channel alpha subunit 5 involved_in ISO
IEA
(PMID:18065446)
GO_REF:0000107
RGD
Ensembl
PMID:18065446 GO_REF:0000107 NCBI chr 8:128,098,613...128,196,515
Ensembl chr 8:128,098,613...128,196,470
JBrowse link
membrane depolarization during AV node cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1c calcium voltage-gated channel subunit alpha1 C involved_in ISS
ISO
GO_REF:0000024
(PMID:26253506)
BHF-UCL
RGD
PMID:26253506 GO_REF:0000024 NCBI chr 4:153,431,169...154,051,932
Ensembl chr 4:153,436,427...154,051,762
JBrowse link
G Cacna1g calcium voltage-gated channel subunit alpha1 G involved_in ISS GO_REF:0000024 BHF-UCL GO_REF:0000024 NCBI chr10:79,851,886...79,919,926
Ensembl chr10:79,851,896...79,919,634
JBrowse link
G Cacnb2 calcium voltage-gated channel auxiliary subunit beta 2 involved_in ISO
IEA
ISS
(PMID:17224476)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
BHF-UCL
PMID:17224476 GO_REF:0000024 GO_REF:0000107 NCBI chr17:82,473,097...82,818,564
Ensembl chr17:82,473,129...82,818,564
JBrowse link
G Scn5a sodium voltage-gated channel alpha subunit 5 involved_in ISO
IEA
ISS
(PMID:18616619)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
BHF-UCL
PMID:18616619 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:128,098,613...128,196,515
Ensembl chr 8:128,098,613...128,196,470
JBrowse link
G Trpm4 transient receptor potential cation channel, subfamily M, member 4 involved_in ISO
IEA
(PMID:27207958)
GO_REF:0000107
RGD
Ensembl
PMID:27207958 GO_REF:0000107 NCBI chr 1:104,918,462...104,949,453
Ensembl chr 1:104,918,462...104,948,653
JBrowse link
membrane depolarization during bundle of His cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna2d1 calcium voltage-gated channel auxiliary subunit alpha2delta 1 involved_in ISO
IEA
(PMID:21383000)
GO_REF:0000107
RGD
Ensembl
PMID:21383000 GO_REF:0000107 NCBI chr 4:19,902,324...20,330,287
Ensembl chr 4:19,905,764...20,330,147
JBrowse link
G Scn5a sodium voltage-gated channel alpha subunit 5 involved_in ISO
IEA
ISS
(PMID:18065446)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
BHF-UCL
PMID:18065446 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:128,098,613...128,196,515
Ensembl chr 8:128,098,613...128,196,470
JBrowse link
G Trpm4 transient receptor potential cation channel, subfamily M, member 4 involved_in ISO
IEA
(PMID:27207958)
GO_REF:0000107
RGD
Ensembl
PMID:27207958 GO_REF:0000107 NCBI chr 1:104,918,462...104,949,453
Ensembl chr 1:104,918,462...104,948,653
JBrowse link
membrane depolarization during Purkinje myocyte cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Scn1b sodium voltage-gated channel beta subunit 1 involved_in ISO
IEA
(PMID:18464934)
GO_REF:0000107
RGD
Ensembl
PMID:18464934 GO_REF:0000107 NCBI chr 1:95,481,298...95,491,211
Ensembl chr 1:95,481,298...95,491,197
JBrowse link
G Scn5a sodium voltage-gated channel alpha subunit 5 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:22766342)
BHF-UCL
Ensembl
RGD
PMID:22766342 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:128,098,613...128,196,515
Ensembl chr 8:128,098,613...128,196,470
JBrowse link
G Trpm4 transient receptor potential cation channel, subfamily M, member 4 involved_in ISO
IEA
(PMID:27207958)
GO_REF:0000107
RGD
Ensembl
PMID:27207958 GO_REF:0000107 NCBI chr 1:104,918,462...104,949,453
Ensembl chr 1:104,918,462...104,948,653
JBrowse link
membrane depolarization during SA node cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1d calcium voltage-gated channel subunit alpha1 D involved_in
acts_upstream_of_or_within
ISO
IEA
(PMID:21131953)
MGI:2180141 (PMID:12700358)
GO_REF:0000107
RGD
Ensembl
PMID:12700358 PMID:21131953 GO_REF:0000107 NCBI chr16:5,233,682...5,527,549
Ensembl chr16:5,233,690...5,674,692
JBrowse link
G Cacna1g calcium voltage-gated channel subunit alpha1 G involved_in ISS GO_REF:0000024 BHF-UCL GO_REF:0000024 NCBI chr10:79,851,886...79,919,926
Ensembl chr10:79,851,896...79,919,634
JBrowse link
G Hcn4 hyperpolarization activated cyclic nucleotide-gated potassium channel 4 involved_in ISO
IEA
(PMID:16407510)
GO_REF:0000107
RGD
Ensembl
PMID:16407510 GO_REF:0000107 NCBI chr 8:68,118,062...68,155,482
Ensembl chr 8:68,118,062...68,155,495
JBrowse link
G Scn5a sodium voltage-gated channel alpha subunit 5 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:18616619)
BHF-UCL
Ensembl
RGD
PMID:18616619 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:128,098,613...128,196,515
Ensembl chr 8:128,098,613...128,196,470
JBrowse link
membrane repolarization during atrial cardiac muscle cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kcna5 potassium voltage-gated channel subfamily A member 5 involved_in ISO
IEA
(PMID:19343045), (PMID:23264583)
GO_REF:0000107
RGD
Ensembl
PMID:19343045 PMID:23264583 GO_REF:0000107 NCBI chr 4:161,040,853...161,044,311
Ensembl chr 4:160,996,950...161,044,408
JBrowse link
G Kcnj5 potassium inwardly-rectifying channel, subfamily J, member 5 involved_in ISO (PMID:20560207) RGD PMID:20560207 NCBI chr 8:38,981,598...39,011,197
Ensembl chr 8:38,983,034...39,011,101
JBrowse link
G Kcnn2 potassium calcium-activated channel subfamily N member 2 involved_in ISO (PMID:19139040) RGD PMID:19139040 NCBI chr18:40,004,693...40,445,043
Ensembl chr18:40,155,939...40,445,045
JBrowse link
G Kcnq1 potassium voltage-gated channel subfamily Q member 1 involved_in ISO
IEA
(PMID:12522251), (PMID:25786344)
GO_REF:0000107
RGD
Ensembl
PMID:12522251 PMID:25786344 GO_REF:0000107 NCBI chr 1:207,721,134...208,054,073
Ensembl chr 1:207,721,131...208,054,072
JBrowse link
membrane repolarization during bundle of His cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kcna5 potassium voltage-gated channel subfamily A member 5 involved_in ISO
IEA
(PMID:23264583)
GO_REF:0000107
RGD
Ensembl
PMID:23264583 GO_REF:0000107 NCBI chr 4:161,040,853...161,044,311
Ensembl chr 4:160,996,950...161,044,408
JBrowse link
membrane repolarization during SA node cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kcna5 potassium voltage-gated channel subfamily A member 5 involved_in ISO
IEA
(PMID:19343045)
GO_REF:0000107
RGD
Ensembl
PMID:19343045 GO_REF:0000107 NCBI chr 4:161,040,853...161,044,311
Ensembl chr 4:160,996,950...161,044,408
JBrowse link
positive regulation of atrial cardiac muscle cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Trpm4 transient receptor potential cation channel, subfamily M, member 4 IMP RGD PMID:23954346 RGD:10003031 NCBI chr 1:104,918,462...104,949,453
Ensembl chr 1:104,918,462...104,948,653
JBrowse link
Purkinje myocyte to ventricular cardiac muscle cell signaling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ryr2 ryanodine receptor 2 involved_in ISO (PMID:17872467) RGD PMID:17872467 NCBI chr17:63,081,527...63,667,141
Ensembl chr17:63,081,527...63,666,705
JBrowse link
regulation of atrial cardiac muscle cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ank2 ankyrin 2 involved_in ISO
IEA
(PMID:12571597)
GO_REF:0000107
RGD
Ensembl
PMID:12571597 GO_REF:0000107 NCBI chr 2:218,052,555...218,628,414
Ensembl chr 2:218,052,555...218,537,259
JBrowse link
G Gja5 gap junction protein, alpha 5 involved_in ISO
IEA
(PMID:23348765)
GO_REF:0000107
RGD
Ensembl
PMID:23348765 GO_REF:0000107 NCBI chr 2:187,291,227...187,310,770
Ensembl chr 2:187,234,674...187,318,512
JBrowse link
G Ryr2 ryanodine receptor 2 involved_in ISO (PMID:17875969) RGD PMID:17875969 NCBI chr17:63,081,527...63,667,141
Ensembl chr17:63,081,527...63,666,705
JBrowse link
regulation of AV node cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ank2 ankyrin 2 involved_in ISO (PMID:12571597) RGD PMID:12571597 NCBI chr 2:218,052,555...218,628,414
Ensembl chr 2:218,052,555...218,537,259
JBrowse link
G Cxadr CXADR, Ig-like cell adhesion molecule involved_in ISO (PMID:18636119) RGD PMID:18636119 NCBI chr11:30,469,778...30,516,990
Ensembl chr11:30,469,526...30,516,988
JBrowse link
G Gja5 gap junction protein, alpha 5 involved_in ISO
IEA
(PMID:22247482)
GO_REF:0000107
(PMID:10515563)
RGD
Ensembl
PMID:10515563 PMID:22247482 GO_REF:0000107 NCBI chr 2:187,291,227...187,310,770
Ensembl chr 2:187,234,674...187,318,512
JBrowse link
G Ryr2 ryanodine receptor 2 involved_in ISO (PMID:17875969) RGD PMID:17875969 NCBI chr17:63,081,527...63,667,141
Ensembl chr17:63,081,527...63,666,705
JBrowse link
regulation of bundle of His cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gja5 gap junction protein, alpha 5 involved_in ISO
IEA
(PMID:22247482)
GO_REF:0000107
(PMID:10515563)
RGD
Ensembl
PMID:10515563 PMID:22247482 GO_REF:0000107 NCBI chr 2:187,291,227...187,310,770
Ensembl chr 2:187,234,674...187,318,512
JBrowse link
G Rangrf RAN guanine nucleotide release factor involved_in ISO (PMID:21621375) RGD PMID:21621375 NCBI chr10:54,176,325...54,177,696
Ensembl chr10:54,176,325...54,177,696
JBrowse link
regulation of Purkinje myocyte action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gja5 gap junction protein, alpha 5 involved_in ISO
IEA
(PMID:22247482)
GO_REF:0000107
RGD
Ensembl
PMID:22247482 GO_REF:0000107 NCBI chr 2:187,291,227...187,310,770
Ensembl chr 2:187,234,674...187,318,512
JBrowse link
regulation of SA node cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ank2 ankyrin 2 involved_in ISO
IEA
(PMID:12571597), (PMID:18832177)
GO_REF:0000107
RGD
Ensembl
PMID:12571597 PMID:18832177 GO_REF:0000107 NCBI chr 2:218,052,555...218,628,414
Ensembl chr 2:218,052,555...218,537,259
JBrowse link
G Ryr2 ryanodine receptor 2 involved_in ISO (PMID:17875969) RGD PMID:17875969 NCBI chr17:63,081,527...63,667,141
Ensembl chr17:63,081,527...63,666,705
JBrowse link
G Tbx18 T-box transcription factor 18 acts_upstream_of ISO
IEA
(PMID:23242162)
GO_REF:0000107
RGD
Ensembl
PMID:23242162 GO_REF:0000107 NCBI chr 8:97,531,960...97,559,988
Ensembl chr 8:97,531,960...97,559,965
JBrowse link
SA node cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ank2 ankyrin 2 involved_in ISO (PMID:18832177) RGD PMID:18832177 NCBI chr 2:218,052,555...218,628,414
Ensembl chr 2:218,052,555...218,537,259
JBrowse link
G Cacna1g calcium voltage-gated channel subunit alpha1 G involved_in ISS GO_REF:0000024 BHF-UCL GO_REF:0000024 NCBI chr10:79,851,886...79,919,926
Ensembl chr10:79,851,896...79,919,634
JBrowse link
G Gja5 gap junction protein, alpha 5 acts_upstream_of_or_within ISO
IEA
MGI:2445466 (PMID:11046183)
GO_REF:0000107
RGD
Ensembl
PMID:11046183 GO_REF:0000107 NCBI chr 2:187,291,227...187,310,770
Ensembl chr 2:187,234,674...187,318,512
JBrowse link
G Hcn4 hyperpolarization activated cyclic nucleotide-gated potassium channel 4 involved_in ISO
IEA
(PMID:12750403)
GO_REF:0000107
RGD
Ensembl
PMID:12750403 GO_REF:0000107 NCBI chr 8:68,118,062...68,155,482
Ensembl chr 8:68,118,062...68,155,495
JBrowse link
G Scn3b sodium voltage-gated channel beta subunit 3 involved_in ISO
IEA
(PMID:19796257)
GO_REF:0000107
RGD
Ensembl
PMID:19796257 GO_REF:0000107 NCBI chr 8:49,527,529...49,550,019
Ensembl chr 8:49,527,577...49,550,018
JBrowse link
G Scn5a sodium voltage-gated channel alpha subunit 5 involved_in ISO
IEA
ISS
(PMID:18616619)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
BHF-UCL
PMID:18616619 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:128,098,613...128,196,515
Ensembl chr 8:128,098,613...128,196,470
JBrowse link
SA node cell to atrial cardiac muscle cell signaling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1g calcium voltage-gated channel subunit alpha1 G involved_in ISS GO_REF:0000024 BHF-UCL GO_REF:0000024 NCBI chr10:79,851,886...79,919,926
Ensembl chr10:79,851,896...79,919,634
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20668
    cellular process 19605
      cell communication 7976
        cell communication involved in cardiac conduction 45
          cell-cell signaling involved in cardiac conduction 24
            AV node cell to bundle of His cell signaling + 11
            Purkinje myocyte to ventricular cardiac muscle cell signaling + 5
            SA node cell to atrial cardiac muscle cell signaling + 10
            atrial cardiac muscle cell to AV node cell signaling + 14
            bundle of His cell to Purkinje myocyte signaling + 7
Path 2
Term Annotations click to browse term
  biological_process 20668
    multicellular organismal process 9161
      system process 3628
        circulatory system process 649
          blood circulation 619
            heart contraction 266
              regulation of heart contraction 217
                cardiac conduction 74
                  cell communication involved in cardiac conduction 45
                    cell-cell signaling involved in cardiac conduction 24
                      AV node cell to bundle of His cell signaling + 11
                      Purkinje myocyte to ventricular cardiac muscle cell signaling + 5
                      SA node cell to atrial cardiac muscle cell signaling + 10
                      atrial cardiac muscle cell to AV node cell signaling + 14
                      bundle of His cell to Purkinje myocyte signaling + 7
paths to the root