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ONTOLOGY REPORT - ANNOTATIONS

Term:renal system pattern specification
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Accession:GO:0072048 term browser browse the term
Definition:Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate into the anatomical structures of the renal system.
Synonyms:related_synonym: renal system pattern formation

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show annotations for term's descendants           Sort by:
metanephric capsule specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxd1 forkhead box D1 involved_in ISO (PMID:15634693) UniProt PMID:15634693 NCBI chrNW_004624905:2,487,981...2,490,068 JBrowse link
pattern specification involved in metanephros development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxd1 forkhead box D1 involved_in ISO (PMID:15634693) UniProt PMID:15634693 NCBI chrNW_004624905:2,487,981...2,490,068 JBrowse link
G Osr1 odd-skipped related transcription factor 1 involved_in ISO (PMID:18835385) UniProt PMID:18835385 NCBI chrNW_004624738:2,136,228...2,559,092
Ensembl chrNW_004624738:2,136,151...2,138,441 		JBrowse link
pronephric field specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pax2 paired box 2 involved_in ISO (PMID:12435636) UniProt PMID:12435636 NCBI chrNW_004624831:375,851...453,968
Ensembl chrNW_004624831:375,866...453,930 		JBrowse link
G Pax8 paired box 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624749:13,291,880...13,358,066
Ensembl chrNW_004624749:13,300,606...13,357,903 		JBrowse link
proximal/distal pattern formation involved in metanephric nephron development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Irx1 iroquois homeobox 1 involved_in ISO (PMID:17875669) UniProt PMID:17875669 NCBI chrNW_004624751:2,005,849...2,014,775
Ensembl chrNW_004624751:2,010,004...2,014,721 		JBrowse link
G Irx2 iroquois homeobox 2 involved_in ISO (PMID:17875669) UniProt PMID:17875669 NCBI chrNW_004624751:1,453,390...1,457,500
Ensembl chrNW_004624751:1,453,390...1,457,470 		JBrowse link
proximal/distal pattern formation involved in nephron development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Irx3 iroquois homeobox 3 involved_in ISO (PMID:17875669) UniProt PMID:17875669 NCBI chrNW_004624757:2,543,968...2,547,452
Ensembl chrNW_004624757:2,543,992...2,547,464 		JBrowse link
specification of anterior mesonephric tubule identity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Osr1 odd-skipped related transcription factor 1 involved_in ISO (PMID:16790474) UniProt PMID:16790474 NCBI chrNW_004624738:2,136,228...2,559,092
Ensembl chrNW_004624738:2,136,151...2,138,441 		JBrowse link
specification of loop of Henle identity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hes5 hes family bHLH transcription factor 5 involved_in ISO (PMID:15821257) UniProt PMID:15821257 NCBI chrNW_004624818:7,516,279...7,517,654
Ensembl chrNW_004624818:7,516,189...7,518,734 		JBrowse link
G Irx1 iroquois homeobox 1 involved_in ISO (PMID:17875669) UniProt PMID:17875669 NCBI chrNW_004624751:2,005,849...2,014,775
Ensembl chrNW_004624751:2,010,004...2,014,721 		JBrowse link
G Irx2 iroquois homeobox 2 involved_in ISO (PMID:17875669) UniProt PMID:17875669 NCBI chrNW_004624751:1,453,390...1,457,500
Ensembl chrNW_004624751:1,453,390...1,457,470 		JBrowse link
G Irx3 iroquois homeobox 3 involved_in ISO (PMID:17875669) UniProt PMID:17875669 NCBI chrNW_004624757:2,543,968...2,547,452
Ensembl chrNW_004624757:2,543,992...2,547,464 		JBrowse link
specification of posterior mesonephric tubule identity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Osr1 odd-skipped related transcription factor 1 involved_in ISO (PMID:16790474) UniProt PMID:16790474 NCBI chrNW_004624738:2,136,228...2,559,092
Ensembl chrNW_004624738:2,136,151...2,138,441 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17646
    multicellular organismal process 7727
      pattern specification process 471
        renal system pattern specification 8
          metanephric cap specification 0
          pattern specification involved in kidney development + 8
          renal system segmentation 0
Path 2
Term Annotations click to browse term
  biological_process 17646
    developmental process 6435
      anatomical structure development 6017
        multicellular organism development 4847
          system development 4242
            renal system development 395
              renal system pattern specification 8
                metanephric cap specification 0
                pattern specification involved in kidney development + 8
                renal system segmentation 0
paths to the root