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ONTOLOGY REPORT - ANNOTATIONS

Term:renal system pattern specification
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Accession:GO:0072048 term browser browse the term
Definition:Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate into the anatomical structures of the renal system.
Synonyms:related_synonym: renal system pattern formation


show annotations for term's descendants           Sort by:
metanephric capsule specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXD1 forkhead box D1 involved_in ISO (PMID:15634693) UniProt PMID:15634693
pattern specification involved in metanephros development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXD1 forkhead box D1 involved_in ISO (PMID:15634693) UniProt PMID:15634693
G OSR1 odd-skipped related transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:14,508,543...14,515,657
Ensembl chr17:14,509,333...14,589,228 		JBrowse link
pronephric field specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PAX2 paired box 2 involved_in ISO (PMID:12435636) UniProt PMID:12435636 NCBI chr28:13,442,894...13,519,853
Ensembl chr28:13,442,893...13,532,094 		JBrowse link
G PAX8 paired box 8 involved_in ISS
IEA 		UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr17:37,307,130...37,331,729
Ensembl chr17:37,306,033...37,363,178 		JBrowse link
proximal/distal pattern formation involved in metanephric nephron development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IRX1 iroquois homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr34:9,537,231...9,544,029
Ensembl chr34:9,538,479...9,544,029 		JBrowse link
G IRX2 iroquois homeobox 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr34:10,228,067...10,233,214
Ensembl chr34:10,227,807...10,232,998 		JBrowse link
proximal/distal pattern formation involved in nephron development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IRX3 iroquois homeobox 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:61,555,608...61,559,185
Ensembl chr 2:61,555,492...61,558,958 		JBrowse link
specification of anterior mesonephric tubule identity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G OSR1 odd-skipped related transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:14,508,543...14,515,657
Ensembl chr17:14,509,333...14,589,228 		JBrowse link
specification of loop of Henle identity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HES5 hes family bHLH transcription factor 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:57,387,961...57,389,412
Ensembl chr 5:57,388,674...57,389,388 		JBrowse link
G IRX1 iroquois homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr34:9,537,231...9,544,029
Ensembl chr34:9,538,479...9,544,029 		JBrowse link
G IRX2 iroquois homeobox 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr34:10,228,067...10,233,214
Ensembl chr34:10,227,807...10,232,998 		JBrowse link
G IRX3 iroquois homeobox 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:61,555,608...61,559,185
Ensembl chr 2:61,555,492...61,558,958 		JBrowse link
specification of posterior mesonephric tubule identity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G OSR1 odd-skipped related transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:14,508,543...14,515,657
Ensembl chr17:14,509,333...14,589,228 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 22130
    multicellular organismal process 8226
      pattern specification process 504
        renal system pattern specification 8
          metanephric cap specification 0
          pattern specification involved in kidney development + 8
          renal system segmentation 0
Path 2
Term Annotations click to browse term
  biological_process 22130
    developmental process 6935
      anatomical structure development 6498
        multicellular organism development 5257
          system development 4583
            renal system development 418
              renal system pattern specification 8
                metanephric cap specification 0
                pattern specification involved in kidney development + 8
                renal system segmentation 0
paths to the root