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ONTOLOGY REPORT - ANNOTATIONS

Term:renal system pattern specification
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Accession:GO:0072048 term browser browse the term
Definition:Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate into the anatomical structures of the renal system.
Synonyms:related_synonym: renal system pattern formation

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show annotations for term's descendants           Sort by:
metanephric capsule specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxd1 forkhead box D1 involved_in ISO (PMID:15634693) UniProt PMID:15634693 NCBI chrNW_004955425:27,158,601...27,159,447 JBrowse link
pattern specification involved in metanephros development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxd1 forkhead box D1 involved_in ISO (PMID:15634693) UniProt PMID:15634693 NCBI chrNW_004955425:27,158,601...27,159,447 JBrowse link
G Osr1 odd-skipped related transcription factor 1 involved_in ISO (PMID:18835385) UniProt PMID:18835385 NCBI chrNW_004955469:1,954,470...1,961,344
Ensembl chrNW_004955469:1,953,370...1,961,390 		JBrowse link
pronephric field specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pax2 paired box 2 involved_in ISO (PMID:12435636) UniProt PMID:12435636 NCBI chrNW_004955485:9,351,913...9,430,607
Ensembl chrNW_004955485:9,350,087...9,430,607 		JBrowse link
G Pax8 paired box 8 involved_in ISO (PMID:12435636) UniProt PMID:12435636 NCBI chrNW_004955470:1,016,226...1,072,643
Ensembl chrNW_004955470:1,016,289...1,073,796 		JBrowse link
proximal/distal pattern formation involved in metanephric nephron development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Irx1 iroquois homeobox 1 involved_in ISO (PMID:17875669) UniProt PMID:17875669 NCBI chrNW_004955504:2,072,540...2,099,781 JBrowse link
G Irx2 iroquois homeobox 2 involved_in ISO (PMID:17875669) UniProt PMID:17875669 NCBI chrNW_004955504:1,456,433...1,460,996
Ensembl chrNW_004955504:1,455,664...1,460,996 		JBrowse link
proximal/distal pattern formation involved in nephron development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Irx3 iroquois homeobox 3 involved_in ISO (PMID:17875669) UniProt PMID:17875669 NCBI chrNW_004955433:11,944,890...11,948,372
Ensembl chrNW_004955433:11,944,890...11,948,369 		JBrowse link
specification of anterior mesonephric tubule identity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Osr1 odd-skipped related transcription factor 1 involved_in ISO (PMID:16790474) UniProt PMID:16790474 NCBI chrNW_004955469:1,954,470...1,961,344
Ensembl chrNW_004955469:1,953,370...1,961,390 		JBrowse link
specification of loop of Henle identity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hes5 hes family bHLH transcription factor 5 involved_in ISO (PMID:15821257) UniProt PMID:15821257 NCBI chrNW_004955486:8,700,212...8,701,581
Ensembl chrNW_004955486:8,700,162...8,701,748 		JBrowse link
G Irx1 iroquois homeobox 1 involved_in ISO (PMID:17875669) UniProt PMID:17875669 NCBI chrNW_004955504:2,072,540...2,099,781 JBrowse link
G Irx2 iroquois homeobox 2 involved_in ISO (PMID:17875669) UniProt PMID:17875669 NCBI chrNW_004955504:1,456,433...1,460,996
Ensembl chrNW_004955504:1,455,664...1,460,996 		JBrowse link
G Irx3 iroquois homeobox 3 involved_in ISO (PMID:17875669) UniProt PMID:17875669 NCBI chrNW_004955433:11,944,890...11,948,372
Ensembl chrNW_004955433:11,944,890...11,948,369 		JBrowse link
specification of posterior mesonephric tubule identity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Osr1 odd-skipped related transcription factor 1 involved_in ISO (PMID:16790474) UniProt PMID:16790474 NCBI chrNW_004955469:1,954,470...1,961,344
Ensembl chrNW_004955469:1,953,370...1,961,390 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12627
    multicellular organismal process 6318
      pattern specification process 451
        renal system pattern specification 8
          metanephric cap specification 0
          pattern specification involved in kidney development + 8
          renal system segmentation 0
Path 2
Term Annotations click to browse term
  biological_process 12627
    developmental process 5998
      anatomical structure development 5669
        multicellular organism development 4634
          system development 4038
            renal system development 382
              renal system pattern specification 8
                metanephric cap specification 0
                pattern specification involved in kidney development + 8
                renal system segmentation 0
paths to the root